Rh4BG182300

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0000030
Physical Location & Seq
Forward (+)
32090676 .. 32094099
3424 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG182300.1

Sequence Viewer

Length: 2193 bp
ATGGAAGACGGAGGGAAGAGAGGTGTGGATGATTGTGGAAGGAGGAAAGCAGTGCATTTTGTGATAGACAAGAAAACCAAAACCAGTGGCCGGAAGCGGAAAAACAGATTGTATCAGGAAGAAAATAAGGTCATTGATACCGCCGTTGAAGTGGAAAGCGACAAAGCGGCTGATGACTGCAAGACAGTCTCTGCTTTTAACGAAGCATCAGAGAATGAGGTCACCATCCGAACAGTATGCCGTGGAAAACACTTCAGAAGGACTATGTCTTCCCTGTCTGAGCAGAAGATACTTGCGACATATGAAATGGGGTTTGGGACACTGCACCAAATCCGCTGTAGGAAATTGAACCTCCCATTGTGCCAAATGCTGGTTGAAAATTTTGACGTTGCCAACTCATGCATCAAGATACACGGGAGGAACTTGACAGTGATTGAGGAAGACTTTAGGCGCATTATGGGAGTCAGAGGTGGAGGGTGTGATGTGGACTTTGAAGGAAGCACCGTTGAGCATGAAATTTTGGCTCTGAAGAGGGAGAAAGCAGAGAAGGAGAGCAAGATAACCATAGGTGGACTGAGTAGGTTGCTCGTTGAATCTGAATTCGTTGATGACACATATAAGGTCGGCTTTGCCTTGTATGCCCTAGCAACTCTGTTATGCCCAGTAACGGGAGCCCACGTGGATGAACGATACCTTATACCACTGAAGGATCCAGGTGCGCTATCTTCCAAAAACTGGGCAAAGCTTGCATTTGCGAAGTTGGTTGAAAGGGTGTCATCGTTTCAGGCGCTGCGTTATGGTGTAGTAGGAGGTTGCATTTTGTTCCTTCAGTTGTTCTACCTGGACGTTGTTGGTAAAGGGATTCTACTATTTCCTAGGATTTATACGCCGGTGATGACTTGGGGCAGGAAGGAGGTAAAGAGGGTTCTGGAAGAAGTAGAGAGGGATGGCGGATTTAGATGCGAGAATGTGCGTGTAACGAAAAAGAACATCTTTGACACGACCCATCAGATGTCGGGATCCGTTGATGCTAGTACAGGGATAAGAACTACTGTAGTGGAGGACTTGTCAAAAGTGAGGTCTGATGTAGGTACTGTGAGAGGGGAGGTAGAAAATCTGAAGTCAACGGTTGGTCGTTTGGAACCAGACATGGGCCGTTTGAGGAGCGCAATTCTGACGCTAGAAACATCTCTTGGCCAACTGAAGGCTGAGGGTATAGGCCACATTGTGGCAGAGGTGATTAAGGAAGTTGTTGAGGACCTCCATAAAGAGTACACGGGTAATGAAGAGAAGAATGATTTTGTGACTGGTCAAAAGCAGGAGCACACAGAAGCTGGCCTACATGATGGTGAGATGTGGCACAGTAAATCTGACATTGGTGTCCTCAATGAGGATGACACAATTGTGGTGTCTGAGATTTCGCACAGCGATTCCCACCTACTGACCTATCTCTTCAGCAAGAAGGTCACCGGTGAAGACAGTGTTGGGAGTAACGAAGTCGCTAGGTGCGAGGGATGGGCTGTCTCTCACTGGGATCTGAGCTGCTTGGCACCAATGCAGTGCTTGAGTAGTGAGGTTGTGAATATAACTGTTGCTTACTTGTTTGATTGGGGATCCGACAACTGGTTCATGCCTACTTCATTTTCTGAGTGTTCATCAGGGATGCAAGTACAAGGGGTTGTGCCTTCTACCATTAAAATGTGCCGATTGAGAAGATTAGTTGGTAGATTCTTGTCATGCCAGAAGATATTTTTTCCCATTCATGACGCTGAACTGAAGCATTGGTTTTTGGCTGTTCTGAACATACCGAACGGGCAATGCGAAGTATGGGATAGCAAGCCCGATATGTCAGCTTACAAACGGCGGCATGATTATGCCATTGCATGTATGTCACTGGTTGAAAAGGTTTTTGCCAATGAGATTCGAATGTCACCTTCCGTATATGCGAAGTTTGGGTCTTTCTCCATCACTTTTACCACCAGCGCTGGTACCAAGGGTGACCAGAGGGTTTGCTTGGCACTTGAGATTGTGAATCACCCGAGGAATGATATGGCTGAACGGGTGTGGCAAGCAGCTGCCGAGGAGGTCCCGAATGTTGTACCAGCCGAAGCTGTTCTATCAGCATCAGTGAATGCATGTGGCGTTCTTGCAGTGACAGGCATGAAGTTCAACCCACGCCGGGCTAGGCGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

730

Amino Acids

81.49

Weight (kDa)

6.58

Isoelectric Point (pI)

39.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1379
Acc65I GGTACC 1 cut(s) 1988
AccB1I GGYRCC 2 cut(s) 1549, 1988
AccB7I CCANNNNNTGG 3 cut(s) 370, 735, 1228
AciI CCGC 6 cut(s) 97, 141, 167, 334, 951, 1864
AclWI GGATC 7 cut(s) 704, 717, 1014, 1027, 1542, 1608, 1621
AcoI YGGCCR 2 cut(s) 88, 1195
AcsI RAATTY 3 cut(s) 379, 516, 599
AcuI CTGAAG 8 cut(s) 238, 548, 725, 812, 1139, 1223, 1438, 1796
AcvI CACGTG 1 cut(s) 679
AdeI CACNNNGTG 1 cut(s) 1228
AfaI GTAC 6 cut(s) 1036, 1093, 1274, 1671, 1990, 2100
AfeI AGCGCT 1 cut(s) 1984
AgeI ACCGGT 1 cut(s) 1469
AgsI TTSAA 8 cut(s) 149, 349, 377, 494, 593, 767, 1901, 2170
AjnI CCWGG 2 cut(s) 712, 840
AjuI GAANNNNNNNTTGG 6 cut(s) 297, 329, 1176, 1208, 1467, 1499
AleI CACNNNNGTG 1 cut(s) 1403
AluBI AGCT 6 cut(s) 745, 1334, 1542, 1853, 2075, 2111
AluI AGCT 6 cut(s) 745, 1334, 1542, 1853, 2075, 2111
Alw21I GWGCWC 1 cut(s) 1326
Alw26I GTCTC 2 cut(s) 193, 1528
AlwI GGATC 7 cut(s) 704, 717, 1014, 1027, 1542, 1608, 1621
AlwNI CAGNNNCTG 3 cut(s) 191, 790, 1334
Ama87I CYCGRG 1 cut(s) 2038
Aor51HI AGCGCT 1 cut(s) 1984
AoxI GGCC 5 cut(s) 88, 1153, 1195, 1219, 1336
ApeKI GCWGC 4 cut(s) 790, 1542, 2072, 2075
ApoI RAATTY 3 cut(s) 379, 516, 599
ArsI GACNNNNNNTTYG 4 cut(s) 1064, 1096, 1940, 1972
AsiGI ACCGGT 1 cut(s) 1469
Asp700I GAANNNNTTC 1 cut(s) 2112
Asp718I GGTACC 1 cut(s) 1988
AspA2I CCTAGG 1 cut(s) 875
AspLEI GCGC 6 cut(s) 453, 721, 790, 1169, 1985, 2190
AspS9I GGNCC 3 cut(s) 1153, 1258, 2086
AsuC2I CCSGG 1 cut(s) 2180
AsuHPI GGTGA 9 cut(s) 214, 904, 1249, 1361, 1459, 1484, 1923, 2009, 2027
AsuII TTCGAA 1 cut(s) 1924
AvaI CYCGRG 1 cut(s) 2038
AvaII GGWCC 2 cut(s) 1258, 2086
AvrII CCTAGG 1 cut(s) 875
BaeI ACNNNNGTAYC 2 cut(s) 129, 162
BalI TGGCCA 1 cut(s) 1197
BamHI GGATCC 3 cut(s) 709, 1019, 1613
BanI GGYRCC 2 cut(s) 1549, 1988
BanII GRGCYC 1 cut(s) 676
BarI GAAGNNNNNNTAC 2 cut(s) 1323, 1355
BbrPI CACGTG 1 cut(s) 679
BbsI GAAGAC 4 cut(s) 12, 261, 447, 1482
Bbv12I GWGCWC 1 cut(s) 1326
BbvCI CCTCAGC 1 cut(s) 1209
BbvI GCAGC 4 cut(s) 777, 1529, 2062, 2084
BccI CCATC 6 cut(s) 233, 941, 1014, 1340, 1509, 1973
BceAI ACGGC 4 cut(s) 128, 225, 1140, 1877
BcgI CGANNNNNNTGC 2 cut(s) 219, 253
BciT130I CCWGG 2 cut(s) 714, 842
BcnI CCSGG 1 cut(s) 2180
BcoDI GTCTC 2 cut(s) 193, 1528
BfaI CTAG 6 cut(s) 644, 876, 1032, 1181, 1503, 2184
BfmI CTRYAG 2 cut(s) 337, 1053
BfoI RGCGCY 3 cut(s) 791, 1986, 2191
BisI GCNGC 6 cut(s) 168, 791, 1543, 1865, 2073, 2076
BlnI CCTAGG 1 cut(s) 875
BlsI GCNGC 6 cut(s) 169, 792, 1544, 1866, 2074, 2077
Bme1390I CCNGG 3 cut(s) 714, 842, 2180
Bme18I GGWCC 2 cut(s) 1258, 2086
BmeT110I CYCGRG 1 cut(s) 2038
BmgT120I GGNCC 3 cut(s) 1153, 1258, 2086
BmiI GGNNCC 8 cut(s) 673, 711, 1021, 1143, 1551, 1615, 1990, 2088
BmrFI CCNGG 3 cut(s) 714, 842, 2180
BmrI ACTGGG 3 cut(s) 656, 745, 1540
BmsI GCATC 6 cut(s) 215, 411, 950, 1018, 1653, 2132
BmuI ACTGGG 3 cut(s) 656, 745, 1540
BpiI GAAGAC 4 cut(s) 12, 261, 447, 1482
Bpu10I CCTNAGC 1 cut(s) 1209
Bpu14I TTCGAA 1 cut(s) 1924
BpuEI CTTGAG 2 cut(s) 1585, 2042
BpuMI CCSGG 1 cut(s) 2180
BsaAI YACGTR 1 cut(s) 679
BsaJI CCNNGG 5 cut(s) 241, 875, 1992, 2039, 2079
BsaWI WCCGGW 1 cut(s) 1469
BsaXI ACNNNNNCTCC 4 cut(s) 663, 693, 1052, 1082
Bse118I RCCGGY 2 cut(s) 889, 1469
Bse1I ACTGG 7 cut(s) 84, 662, 740, 1312, 1535, 1628, 1899
Bse3DI GCAATG 2 cut(s) 1823, 1878
BseBI CCWGG 2 cut(s) 714, 842
BseDI CCNNGG 5 cut(s) 241, 875, 1992, 2039, 2079
BseGI GGATG 7 cut(s) 34, 225, 688, 952, 1399, 1520, 1668
BseMI GCAATG 2 cut(s) 1823, 1878
BseMII CTCAG 6 cut(s) 270, 566, 1200, 1404, 1529, 1638
BseNI ACTGG 7 cut(s) 84, 662, 740, 1312, 1535, 1628, 1899
BseRI GAGGAG 2 cut(s) 1177, 2096
BseXI GCAGC 4 cut(s) 777, 1529, 2062, 2084
BsgI GTGCAG 1 cut(s) 308
BshFI GGCC 5 cut(s) 90, 1155, 1197, 1221, 1338
BshNI GGYRCC 2 cut(s) 1549, 1988
BshTI ACCGGT 1 cut(s) 1469
BsiHKAI GWGCWC 1 cut(s) 1326
BsiHKCI CYCGRG 1 cut(s) 2038
BsiSI CCGG 4 cut(s) 91, 890, 1470, 2179
BslFI GGGAC 2 cut(s) 331, 2072
BsmAI GTCTC 2 cut(s) 193, 1528
BsmFI GGGAC 2 cut(s) 331, 2072
BsmI GAATGC 1 cut(s) 2137
BsnI GGCC 5 cut(s) 90, 1155, 1197, 1221, 1338
BsoBI CYCGRG 1 cut(s) 2038
Bsp119I TTCGAA 1 cut(s) 1924
Bsp1286I GDGCHC 2 cut(s) 676, 1326
Bsp143I GATC 4 cut(s) 709, 1019, 1534, 1613
BspACI CCGC 6 cut(s) 97, 141, 167, 334, 951, 1864
BspANI GGCC 5 cut(s) 90, 1155, 1197, 1221, 1338
BspCNI CTCAG 6 cut(s) 271, 567, 1201, 1405, 1530, 1639
BspHI TCATGA 1 cut(s) 1762
BspLI GGNNCC 8 cut(s) 673, 711, 1021, 1143, 1551, 1615, 1990, 2088
BspPI GGATC 7 cut(s) 704, 717, 1014, 1027, 1542, 1608, 1621
BspT104I TTCGAA 1 cut(s) 1924
BspT107I GGYRCC 2 cut(s) 1549, 1988
BsrDI GCAATG 2 cut(s) 1823, 1878
BsrFI RCCGGY 2 cut(s) 889, 1469
BsrI ACTGG 7 cut(s) 84, 662, 740, 1312, 1535, 1628, 1899
BssAI RCCGGY 2 cut(s) 889, 1469
BssECI CCNNGG 5 cut(s) 241, 875, 1992, 2039, 2079
BssMI GATC 4 cut(s) 709, 1019, 1534, 1613
BssT1I CCWWGG 2 cut(s) 875, 1992
Bst2UI CCWGG 2 cut(s) 714, 842
Bst6I CTCTTC 4 cut(s) 11, 524, 1281, 1457
BstAPI GCANNNNNTGC 1 cut(s) 746
BstBAI YACGTR 1 cut(s) 679
BstBI TTCGAA 1 cut(s) 1924
BstC8I GCNNGC 4 cut(s) 747, 1336, 1838, 2070
BstDEI CTNAG 6 cut(s) 279, 575, 1209, 1413, 1538, 1647
BstDSI CCRYGG 1 cut(s) 241
BstEII GGTNACC 3 cut(s) 220, 1465, 1997
BstENI CCTNNNNNAGG 1 cut(s) 1388
BstF5I GGATG 7 cut(s) 34, 225, 688, 952, 1399, 1520, 1668
BstH2I RGCGCY 3 cut(s) 791, 1986, 2191
BstHHI GCGC 6 cut(s) 453, 721, 790, 1169, 1985, 2190
BstKTI GATC 4 cut(s) 712, 1022, 1537, 1616
BstMAI GTCTC 2 cut(s) 193, 1528
BstMBI GATC 4 cut(s) 709, 1019, 1534, 1613
BstMWI GCNNNNNNNGC 2 cut(s) 638, 746
BstNI CCWGG 2 cut(s) 714, 842
BstNSI RCATGY 2 cut(s) 1887, 2139
BstPI GGTNACC 3 cut(s) 220, 1465, 1997
BstSCI CCNGG 3 cut(s) 712, 840, 2178
BstSFI CTRYAG 2 cut(s) 337, 1053
BstV1I GCAGC 4 cut(s) 777, 1529, 2062, 2084
BstV2I GAAGAC 4 cut(s) 12, 261, 447, 1482
BstX2I RGATCY 4 cut(s) 709, 1019, 1534, 1613
BstYI RGATCY 4 cut(s) 709, 1019, 1534, 1613
BsuRI GGCC 5 cut(s) 90, 1155, 1197, 1221, 1338
BtgI CCRYGG 1 cut(s) 241
BtsCI GGATG 7 cut(s) 34, 225, 688, 952, 1399, 1520, 1668
BtsI GCAGTG 4 cut(s) 57, 320, 1565, 2157
Cac8I GCNNGC 4 cut(s) 747, 1336, 1838, 2070
CaiI CAGNNNCTG 3 cut(s) 191, 790, 1334
CciI TCATGA 1 cut(s) 1762
CfoI GCGC 6 cut(s) 453, 721, 790, 1169, 1985, 2190
Cfr10I RCCGGY 2 cut(s) 889, 1469
Cfr13I GGNCC 3 cut(s) 1153, 1258, 2086
CseI GACGC 2 cut(s) 1186, 1775
Csp6I GTAC 6 cut(s) 1035, 1092, 1273, 1670, 1989, 2099
CspAI ACCGGT 1 cut(s) 1469
CspCI CAANNNNNGTGG 2 cut(s) 67, 102
CviQI GTAC 6 cut(s) 1035, 1092, 1273, 1670, 1989, 2099
DdeI CTNAG 6 cut(s) 279, 575, 1209, 1413, 1538, 1647
DpnI GATC 4 cut(s) 711, 1021, 1536, 1615
DpnII GATC 4 cut(s) 709, 1019, 1534, 1613
DraIII CACNNNGTG 1 cut(s) 1228
DrdI GACNNNNNNGTC 1 cut(s) 1379
DseDI GACNNNNNNGTC 1 cut(s) 1379
EaeI YGGCCR 2 cut(s) 88, 1195
Eam1104I CTCTTC 4 cut(s) 11, 524, 1281, 1457
EarI CTCTTC 4 cut(s) 11, 524, 1281, 1457
EciI GGCGGA 1 cut(s) 966
Eco130I CCWWGG 2 cut(s) 875, 1992
Eco24I GRGCYC 1 cut(s) 676
Eco47I GGWCC 2 cut(s) 1258, 2086
Eco47III AGCGCT 1 cut(s) 1984
Eco57I CTGAAG 8 cut(s) 238, 548, 725, 812, 1139, 1223, 1438, 1796
Eco72I CACGTG 1 cut(s) 679
Eco88I CYCGRG 1 cut(s) 2038
Eco91I GGTNACC 3 cut(s) 220, 1465, 1997
EcoNI CCTNNNNNAGG 1 cut(s) 1388
EcoO109I RGGNCCY 2 cut(s) 1258, 2086
EcoO65I GGTNACC 3 cut(s) 220, 1465, 1997
EcoRI GAATTC 1 cut(s) 599
EcoRII CCWGG 2 cut(s) 712, 840
EcoT14I CCWWGG 2 cut(s) 875, 1992
EcoT22I ATGCAT 2 cut(s) 404, 2137
EcoT38I GRGCYC 1 cut(s) 676
ErhI CCWWGG 2 cut(s) 875, 1992
FalI AAGNNNNNCTT 4 cut(s) 611, 643, 977, 1009
FaqI GGGAC 2 cut(s) 331, 2072
FauNDI CATATG 1 cut(s) 301
Fnu4HI GCNGC 6 cut(s) 168, 791, 1543, 1865, 2073, 2076
FokI GGATG 7 cut(s) 41, 212, 695, 959, 1406, 1527, 1675
FriOI GRGCYC 1 cut(s) 676
Fsp4HI GCNGC 6 cut(s) 168, 791, 1543, 1865, 2073, 2076
FspBI CTAG 6 cut(s) 644, 876, 1032, 1181, 1503, 2184
GlaI GCGC 6 cut(s) 452, 720, 789, 1168, 1984, 2189
GluI GCNGC 6 cut(s) 168, 791, 1543, 1865, 2073, 2076
HaeII RGCGCY 3 cut(s) 791, 1986, 2191
HaeIII GGCC 5 cut(s) 90, 1155, 1197, 1221, 1338
HapII CCGG 4 cut(s) 91, 890, 1470, 2179
HgaI GACGC 2 cut(s) 1186, 1775
HhaI GCGC 6 cut(s) 453, 721, 790, 1169, 1985, 2190
Hin6I GCGC 6 cut(s) 451, 719, 788, 1167, 1983, 2188
HinP1I GCGC 6 cut(s) 451, 719, 788, 1167, 1983, 2188
HincII GTYRAC 1 cut(s) 1125
HindII GTYRAC 1 cut(s) 1125
HindIII AAGCTT 1 cut(s) 743
HinfI GANTC 7 cut(s) 462, 593, 862, 1430, 1728, 1921, 2032
HpaII CCGG 4 cut(s) 91, 890, 1470, 2179
HphI GGTGA 9 cut(s) 214, 904, 1249, 1361, 1459, 1484, 1923, 2009, 2027
Hpy166II GTNNAC 4 cut(s) 487, 572, 1125, 1275
Hpy188III TCNNGA 6 cut(s) 116, 406, 929, 1017, 1763, 2089
Hpy8I GTNNAC 4 cut(s) 487, 572, 1125, 1275
HpyCH4IV ACGT 3 cut(s) 387, 678, 846
HpyF10VI GCNNNNNNNGC 2 cut(s) 638, 746
HpyF3I CTNAG 6 cut(s) 279, 575, 1209, 1413, 1538, 1647
HpySE526I ACGT 3 cut(s) 387, 678, 846
HspAI GCGC 6 cut(s) 451, 719, 788, 1167, 1983, 2188
KpnI GGTACC 1 cut(s) 1992
Kzo9I GATC 4 cut(s) 709, 1019, 1534, 1613
LmnI GCTCC 3 cut(s) 671, 1164, 1321
Lsp1109I GCAGC 4 cut(s) 777, 1529, 2062, 2084
LweI GCATC 6 cut(s) 215, 411, 950, 1018, 1653, 2132
MaeI CTAG 6 cut(s) 644, 876, 1032, 1181, 1503, 2184
MaeII ACGT 3 cut(s) 387, 678, 846
MalI GATC 4 cut(s) 711, 1021, 1536, 1615
MboI GATC 4 cut(s) 709, 1019, 1534, 1613
MfeI CAATTG 1 cut(s) 1401
MflI RGATCY 4 cut(s) 709, 1019, 1534, 1613
MhlI GDGCHC 2 cut(s) 676, 1326
MlsI TGGCCA 1 cut(s) 1197
MluCI AATT 6 cut(s) 344, 379, 516, 599, 1170, 1401
MluNI TGGCCA 1 cut(s) 1197
MlyI GAGTC 1 cut(s) 471
MmeI TCCRAC 1 cut(s) 1641
Mox20I TGGCCA 1 cut(s) 1197
Mph1103I ATGCAT 2 cut(s) 404, 2137
MroXI GAANNNNTTC 1 cut(s) 2112
MscI TGGCCA 1 cut(s) 1197
MseI TTAA 3 cut(s) 198, 1242, 1695
MslI CAYNNNNRTG 5 cut(s) 681, 1347, 1403, 1697, 1872
Msp20I TGGCCA 1 cut(s) 1197
MspA1I CMGCKG 2 cut(s) 336, 2075
MspI CCGG 4 cut(s) 91, 890, 1470, 2179
MspR9I CCNGG 3 cut(s) 714, 842, 2180
MunI CAATTG 1 cut(s) 1401
Mva1269I GAATGC 1 cut(s) 2137
MvaI CCWGG 2 cut(s) 714, 842
MwoI GCNNNNNNNGC 2 cut(s) 638, 746
NciI CCSGG 1 cut(s) 2180
NdeI CATATG 1 cut(s) 301
NdeII GATC 4 cut(s) 709, 1019, 1534, 1613
NlaIV GGNNCC 8 cut(s) 673, 711, 1021, 1143, 1551, 1615, 1990, 2088
NmeAIII GCCGAG 1 cut(s) 2104
NmuCI GTSAC 7 cut(s) 220, 1303, 1465, 1890, 1929, 1997, 2152
NsiI ATGCAT 2 cut(s) 404, 2137
NspI RCATGY 2 cut(s) 1887, 2139
NspV TTCGAA 1 cut(s) 1924
OliI CACNNNNGTG 1 cut(s) 1403
PagI TCATGA 1 cut(s) 1762
PcsI WCGNNNNNNNCGW 2 cut(s) 1506, 1818
PctI GAATGC 1 cut(s) 2137
PdmI GAANNNNTTC 1 cut(s) 2112
PfeI GAWTC 6 cut(s) 593, 862, 1430, 1728, 1921, 2032
PflFI GACNNNGTC 1 cut(s) 265
PflMI CCANNNNNTGG 3 cut(s) 370, 735, 1228
PinAI ACCGGT 1 cut(s) 1469
PkrI GCNGC 6 cut(s) 169, 792, 1544, 1866, 2074, 2077
PleI GAGTC 1 cut(s) 470
PmaCI CACGTG 1 cut(s) 679
PmlI CACGTG 1 cut(s) 679
PpsI GAGTC 1 cut(s) 470
Ppu21I YACGTR 1 cut(s) 679
PpuMI RGGWCCY 2 cut(s) 1258, 2086
Psp5II RGGWCCY 2 cut(s) 1258, 2086
Psp6I CCWGG 2 cut(s) 712, 840
PspCI CACGTG 1 cut(s) 679
PspEI GGTNACC 3 cut(s) 220, 1465, 1997
PspGI CCWGG 2 cut(s) 712, 840
PspN4I GGNNCC 8 cut(s) 673, 711, 1021, 1143, 1551, 1615, 1990, 2088
PspPI GGNCC 3 cut(s) 1153, 1258, 2086
PspPPI RGGWCCY 2 cut(s) 1258, 2086
PsrI GAACNNNNNNTAC 2 cut(s) 909, 941
PstNI CAGNNNCTG 3 cut(s) 191, 790, 1334
PsuI RGATCY 4 cut(s) 709, 1019, 1534, 1613
PsyI GACNNNGTC 1 cut(s) 265
PvuII CAGCTG 1 cut(s) 2075
RsaI GTAC 6 cut(s) 1036, 1093, 1274, 1671, 1990, 2100
RsaNI GTAC 6 cut(s) 1035, 1092, 1273, 1670, 1989, 2099
RseI CAYNNNNRTG 5 cut(s) 681, 1347, 1403, 1697, 1872
SaqAI TTAA 3 cut(s) 198, 1242, 1695
SatI GCNGC 6 cut(s) 168, 791, 1543, 1865, 2073, 2076
Sau3AI GATC 4 cut(s) 709, 1019, 1534, 1613
Sau96I GGNCC 3 cut(s) 1153, 1258, 2086
SchI GAGTC 1 cut(s) 471
ScrFI CCNGG 3 cut(s) 714, 842, 2180
SduI GDGCHC 2 cut(s) 676, 1326
SfaNI GCATC 6 cut(s) 215, 411, 950, 1018, 1653, 2132
SfcI CTRYAG 2 cut(s) 337, 1053
SfuI TTCGAA 1 cut(s) 1924
SgrAI CRCCGGYG 2 cut(s) 889, 1469
SinI GGWCC 2 cut(s) 1258, 2086
SmiMI CAYNNNNRTG 5 cut(s) 681, 1347, 1403, 1697, 1872
SmlI CTYRAG 2 cut(s) 1564, 2021
SmoI CTYRAG 2 cut(s) 1564, 2021
Sse9I AATT 6 cut(s) 344, 379, 516, 599, 1170, 1401
SsiI CCGC 6 cut(s) 97, 141, 167, 334, 951, 1864
SspMI CTAG 6 cut(s) 644, 876, 1032, 1181, 1503, 2184
StyD4I CCNGG 3 cut(s) 712, 840, 2178
StyI CCWWGG 2 cut(s) 875, 1992
TaiI ACGT 3 cut(s) 390, 681, 849
TaqI TCGA 1 cut(s) 1924
TasI AATT 6 cut(s) 344, 379, 516, 599, 1170, 1401
TatI WGTACW 3 cut(s) 1034, 1272, 1669
TauI GCSGC 2 cut(s) 170, 1867
TfiI GAWTC 6 cut(s) 593, 862, 1430, 1728, 1921, 2032
Tru1I TTAA 3 cut(s) 198, 1242, 1695
Tru9I TTAA 3 cut(s) 198, 1242, 1695
TseFI GTSAC 7 cut(s) 220, 1303, 1465, 1890, 1929, 1997, 2152
TseI GCWGC 4 cut(s) 790, 1542, 2072, 2075
Tsp45I GTSAC 7 cut(s) 220, 1303, 1465, 1890, 1929, 1997, 2152
TspDTI ATGAA 9 cut(s) 318, 528, 699, 1299, 1618, 1629, 1644, 1751, 2177
TspGWI ACGGA 3 cut(s) 24, 1012, 1927
Tth111I GACNNNGTC 1 cut(s) 265
Van91I CCANNNNNTGG 3 cut(s) 370, 735, 1228
VpaK11BI GGWCC 2 cut(s) 1258, 2086
XagI CCTNNNNNAGG 1 cut(s) 1388
XapI RAATTY 3 cut(s) 379, 516, 599
XceI RCATGY 2 cut(s) 1887, 2139
XmaJI CCTAGG 1 cut(s) 875
XmnI GAANNNNTTC 1 cut(s) 2112
XspI CTAG 6 cut(s) 644, 876, 1032, 1181, 1503, 2184
Zsp2I ATGCAT 2 cut(s) 404, 2137
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.