Rmu_co8509671.1_g000001

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8509671.1
OG0000030
Physical Location & Seq
Forward (+)
1 .. 3293
3293 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8509671.1_g000001.1.cds

Sequence Viewer

Length: 1993 bp
accaaaaactgagaacgcagtcgaacaaagttttacctcccgttttaccacaaccaaatgttcctccgtacacattcgaattcgatctggaccatctctctccaagaacaacagtcattcgcttcctccagaatcctcaagcgctctccacttctcgctcatcaaccctcctgtcggctctctcctgcccaactttatcgtcgtcggcggagtaaccggctccgattcgtggcagctcgttggatccggacaactacgacatagtagtggcgataacaacggtggatcagataatggagtagccttgaatggtgcggtggcggtcatcgagctcctgcagcagctattaaggcagcctttaaggaagaatttgcatataaatatcaggaaaatggtttcagctgaggtgaaggttaaacgtagaaggttgatgccggataatctggttaaatttggcgattcagtccccactcgtgagtttaaagagaaaattggtgggaatggtgaaagttctcataatgtggcaaaacaaggtgtgctgactataagaactggctgcaatccgaaagaattcaaagaaacagttttgggtttgtcaaatgcaaagacaattgcaattaatgaaatgggatttggcccattacagaggctaggatgcagcaaacttaaccgtgagatatgtcaaatgcttgtcgacaactttgacgtgggaagctgctccattaagattcatgggaggtctttatgcatcaatgaaggtgacttccagcgtgttatgggtgtgcgtgatggtggaacaccagtatccctagagggttattcgtctgttgaggtgatgaaggatgtaatgagcaggttaagtattgggcacaaagagattactgtagagtggttgaagaaaattatcaaagaaggtaaggttgctgatgacacctttaaagtgtgctttgtcatgtatgctcttgcaatattattgtgcccgaccactcctggtagcgtagatgtgaggttcctatttccattacaagacccgagatctataggtacgaagaattgggcaacattttgttttcgacatctattggaaggtgtgtcatcatatcagaaaaatcggttagggtacatgagtgggtgcatactgttcctgcaactgttttattttgattcagttgcctatagtacgtccatcgtgtcaaagtcaattgagccggttgttgcatggactagcaagaggtcaaggagtctgattgagtggattattggaaaagggggatttaactgcagtagtgtatatgtgacgaaaatattttctgcaaaaaaagggcagaccgatgaattcgatgatggtagtacgggtttccactcaactatttctgaagatatttttaaggcaatgtctgaagtatctgatgtggaatctgatgttcggaggctctcttcaatgttgggttatttggagtccaacatatgcatattgagaaataaaatatgtgaagtcgaacaattagtagttgtcatgaaggctggtgccatcgaatgtattgttgctgatgtgatgaaggttgtaaaatcaatgggggcaaacacctttgatcacgttggccatgtttctaaggaggagatagatgcccatcagtgtggtactgccattggtatggagacaaaaccaagacaattatcttccttgccgcgtaaacctaatgatggatgctggcaaaaaccattatatgaggaaactgaaccaaaggaggttgatccagtggtagatgagagggttgttgaagatgccccaaaagtaagcgtcgactacttcaatgtgtcgtcaaaggctagaaagcgtaaggatcgtttcccgtcaactgaaaatatatcacagaaggatttgaagatgttgaagtttctctttagcaacggaagcataggagtagataaatcaaggtacttattttattccctattgaccctttacatttttaggaaggctttatggtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMG_box

Protein Analysis

663

Amino Acids

73.48

Weight (kDa)

8.97

Isoelectric Point (pI)

45.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 844
AccB1I GGYRCC 1 cut(s) 1527
AccI GTMKAC 2 cut(s) 694, 1804
AccII CGCG 1 cut(s) 1691
AccIII TCCGGA 1 cut(s) 246
AciI CCGC 4 cut(s) 208, 315, 321, 1689
AclWI GGATC 5 cut(s) 238, 251, 293, 1749, 1852
AcoI YGGCCR 1 cut(s) 1601
AcsI RAATTY 5 cut(s) 79, 368, 450, 570, 1335
AcuI CTGAAG 2 cut(s) 1396, 1420
AfaI GTAC 7 cut(s) 70, 1046, 1122, 1181, 1352, 1643, 1941
AfeI AGCGCT 1 cut(s) 143
AfiI CCNNNNNNNGG 3 cut(s) 174, 229, 1704
AgsI TTSAA 8 cut(s) 308, 575, 896, 1441, 1782, 1814, 1886, 1895
AjiI CACGTC 1 cut(s) 707
AjnI CCWGG 1 cut(s) 989
AjuI GAANNNNNNNTTGG 2 cut(s) 616, 648
AluBI AGCT 5 cut(s) 236, 332, 344, 402, 715
AluI AGCT 5 cut(s) 236, 332, 344, 402, 715
Alw21I GWGCWC 1 cut(s) 334
Alw26I GTCTC 1 cut(s) 1653
AlwI GGATC 5 cut(s) 238, 251, 293, 1749, 1852
Ama87I CYCGRG 1 cut(s) 1031
Aor13HI TCCGGA 1 cut(s) 246
Aor51HI AGCGCT 1 cut(s) 143
AoxI GGCC 2 cut(s) 635, 1601
ApeKI GCWGC 7 cut(s) 233, 338, 341, 353, 556, 658, 715
ApoI RAATTY 5 cut(s) 79, 368, 450, 570, 1335
AseI ATTAAT 1 cut(s) 619
Asp700I GAANNNNTTC 1 cut(s) 570
AspLEI GCGC 1 cut(s) 144
AspS9I GGNCC 2 cut(s) 90, 636
AsuHPI GGTGA 4 cut(s) 419, 516, 771, 845
AsuII TTCGAA 1 cut(s) 77
AvaI CYCGRG 1 cut(s) 1031
AvaII GGWCC 1 cut(s) 90
BaeGI GKGCMC 2 cut(s) 871, 981
BaeI ACNNNNGTAYC 4 cut(s) 787, 820, 1112, 1145
BalI TGGCCA 1 cut(s) 1603
BamHI GGATCC 1 cut(s) 243
BanI GGYRCC 1 cut(s) 1527
BanII GRGCYC 1 cut(s) 334
BauI CACGAG 1 cut(s) 472
Bbv12I GWGCWC 1 cut(s) 334
BbvCI CCTCAGC 1 cut(s) 403
BbvI GCAGC 7 cut(s) 245, 350, 353, 365, 543, 670, 702
BccI CCATC 7 cut(s) 101, 783, 1194, 1338, 1539, 1639, 1698
BciT130I CCWGG 1 cut(s) 991
BciVI GTATCC 1 cut(s) 815
BclI TGATCA 1 cut(s) 1592
BcoDI GTCTC 1 cut(s) 1653
BfaI CTAG 4 cut(s) 651, 810, 1225, 1831
BfmI CTRYAG 5 cut(s) 336, 883, 1039, 1175, 1280
BfoI RGCGCY 1 cut(s) 145
BfuAI ACCTGC 1 cut(s) 844
BfuI GTATCC 1 cut(s) 815
BglII AGATCT 1 cut(s) 1035
BisI GCNGC 8 cut(s) 234, 339, 342, 354, 557, 659, 716, 1689
BlsI GCNGC 8 cut(s) 235, 340, 343, 355, 558, 660, 717, 1690
Bme1390I CCNGG 1 cut(s) 991
Bme18I GGWCC 1 cut(s) 90
BmeT110I CYCGRG 1 cut(s) 1031
BmgBI CACGTC 1 cut(s) 707
BmgT120I GGNCC 2 cut(s) 90, 636
BmiI GGNNCC 4 cut(s) 221, 245, 1011, 1529
BmrFI CCNGG 1 cut(s) 991
BmsI GCATC 6 cut(s) 421, 645, 757, 1616, 1698, 1775
BpmI CTGGAG 1 cut(s) 112
Bpu10I CCTNAGC 1 cut(s) 403
Bpu14I TTCGAA 1 cut(s) 77
BpuEI CTTGAG 1 cut(s) 122
BsaBI GATNNNNATC 1 cut(s) 1630
BsaWI WCCGGW 1 cut(s) 246
Bsc4I CCNNNNNNNGG 3 cut(s) 174, 229, 1704
Bse118I RCCGGY 2 cut(s) 216, 1208
Bse1I ACTGG 3 cut(s) 557, 801, 1758
Bse3DI GCAATG 1 cut(s) 1399
Bse8I GATNNNNATC 1 cut(s) 1630
BseAI TCCGGA 1 cut(s) 246
BseBI CCWGG 1 cut(s) 991
BseGI GGATG 3 cut(s) 660, 848, 1713
BseJI GATNNNNATC 1 cut(s) 1630
BseLI CCNNNNNNNGG 3 cut(s) 174, 229, 1704
BseMI GCAATG 1 cut(s) 1399
BseMII CTCAG 1 cut(s) 394
BseNI ACTGG 3 cut(s) 557, 801, 1758
BseRI GAGGAG 1 cut(s) 1632
BseSI GKGCMC 2 cut(s) 871, 981
BseXI GCAGC 7 cut(s) 245, 350, 353, 365, 543, 670, 702
Bsh1236I CGCG 1 cut(s) 1691
BshFI GGCC 2 cut(s) 637, 1603
BshNI GGYRCC 1 cut(s) 1527
BsiHKAI GWGCWC 1 cut(s) 334
BsiHKCI CYCGRG 1 cut(s) 1031
BsiSI CCGG 4 cut(s) 217, 247, 435, 1209
BslFI GGGAC 1 cut(s) 450
BslI CCNNNNNNNGG 3 cut(s) 174, 229, 1704
BsmAI GTCTC 1 cut(s) 1653
BsmFI GGGAC 1 cut(s) 450
BsnI GGCC 2 cut(s) 637, 1603
BsoBI CYCGRG 1 cut(s) 1031
Bsp119I TTCGAA 1 cut(s) 77
Bsp1286I GDGCHC 3 cut(s) 334, 871, 981
Bsp13I TCCGGA 1 cut(s) 246
Bsp143I GATC 7 cut(s) 84, 243, 285, 1035, 1592, 1754, 1844
BspACI CCGC 4 cut(s) 208, 315, 321, 1689
BspANI GGCC 2 cut(s) 637, 1603
BspCNI CTCAG 1 cut(s) 395
BspEI TCCGGA 1 cut(s) 246
BspFNI CGCG 1 cut(s) 1691
BspHI TCATGA 1 cut(s) 1516
BspLI GGNNCC 4 cut(s) 221, 245, 1011, 1529
BspMAI CTGCAG 2 cut(s) 340, 1284
BspMI ACCTGC 1 cut(s) 844
BspPI GGATC 5 cut(s) 238, 251, 293, 1749, 1852
BspT104I TTCGAA 1 cut(s) 77
BspT107I GGYRCC 1 cut(s) 1527
BsrDI GCAATG 1 cut(s) 1399
BsrFI RCCGGY 2 cut(s) 216, 1208
BsrI ACTGG 3 cut(s) 557, 801, 1758
BssAI RCCGGY 2 cut(s) 216, 1208
BssMI GATC 7 cut(s) 84, 243, 285, 1035, 1592, 1754, 1844
BssSI CACGAG 1 cut(s) 472
Bst2BI CACGAG 1 cut(s) 472
Bst2UI CCWGG 1 cut(s) 991
Bst4CI ACNGT 7 cut(s) 114, 282, 584, 672, 884, 1141, 1153
Bst6I CTCTTC 1 cut(s) 1442
BstBI TTCGAA 1 cut(s) 77
BstC8I GCNNGC 1 cut(s) 1713
BstDEI CTNAG 3 cut(s) 10, 403, 1612
BstF5I GGATG 3 cut(s) 660, 848, 1713
BstFNI CGCG 1 cut(s) 1691
BstH2I RGCGCY 1 cut(s) 145
BstHHI GCGC 1 cut(s) 144
BstKTI GATC 7 cut(s) 87, 246, 288, 1038, 1595, 1757, 1847
BstMAI GTCTC 1 cut(s) 1653
BstMBI GATC 7 cut(s) 84, 243, 285, 1035, 1592, 1754, 1844
BstMWI GCNNNNNNNGC 3 cut(s) 338, 350, 1915
BstNI CCWGG 1 cut(s) 991
BstSCI CCNGG 1 cut(s) 989
BstSFI CTRYAG 5 cut(s) 336, 883, 1039, 1175, 1280
BstSLI GKGCMC 2 cut(s) 871, 981
BstUI CGCG 1 cut(s) 1691
BstV1I GCAGC 7 cut(s) 245, 350, 353, 365, 543, 670, 702
BstX2I RGATCY 2 cut(s) 243, 1035
BstXI CCANNNNNNTGG 2 cut(s) 1638, 1655
BstYI RGATCY 2 cut(s) 243, 1035
BsuI GTATCC 1 cut(s) 815
BsuRI GGCC 2 cut(s) 637, 1603
BtrI CACGTC 1 cut(s) 707
BtsCI GGATG 3 cut(s) 660, 848, 1713
BtsIMutI CAGTG 2 cut(s) 1641, 1765
BveI ACCTGC 1 cut(s) 844
Cac8I GCNNGC 1 cut(s) 1713
CciI TCATGA 1 cut(s) 1516
CfoI GCGC 1 cut(s) 144
Cfr10I RCCGGY 2 cut(s) 216, 1208
Cfr13I GGNCC 2 cut(s) 90, 636
CseI GACGC 1 cut(s) 1790
Csp6I GTAC 7 cut(s) 69, 1045, 1121, 1180, 1351, 1642, 1940
CviAII CATG 6 cut(s) 732, 953, 1124, 1219, 1517, 1605
CviQI GTAC 7 cut(s) 69, 1045, 1121, 1180, 1351, 1642, 1940
DdeI CTNAG 3 cut(s) 10, 403, 1612
DpnI GATC 7 cut(s) 86, 245, 287, 1037, 1594, 1756, 1846
DpnII GATC 7 cut(s) 84, 243, 285, 1035, 1592, 1754, 1844
DraI TTTAAA 2 cut(s) 482, 938
EaeI YGGCCR 1 cut(s) 1601
Eam1104I CTCTTC 1 cut(s) 1442
EarI CTCTTC 1 cut(s) 1442
EciI GGCGGA 1 cut(s) 223
Ecl136II GAGCTC 1 cut(s) 332
Eco24I GRGCYC 1 cut(s) 334
Eco47I GGWCC 1 cut(s) 90
Eco47III AGCGCT 1 cut(s) 143
Eco53kI GAGCTC 1 cut(s) 332
Eco57I CTGAAG 2 cut(s) 1396, 1420
Eco88I CYCGRG 1 cut(s) 1031
EcoICRI GAGCTC 1 cut(s) 332
EcoRI GAATTC 3 cut(s) 79, 570, 1335
EcoRII CCWGG 1 cut(s) 989
EcoT22I ATGCAT 2 cut(s) 750, 1473
EcoT38I GRGCYC 1 cut(s) 334
FaeI CATG 6 cut(s) 735, 956, 1127, 1222, 1520, 1608
FalI AAGNNNNNCTT 4 cut(s) 341, 373, 1887, 1919
FaqI GGGAC 1 cut(s) 450
FatI CATG 6 cut(s) 731, 952, 1123, 1218, 1516, 1604
FauNDI CATATG 1 cut(s) 1467
FbaI TGATCA 1 cut(s) 1592
FblI GTMKAC 2 cut(s) 694, 1804
Fnu4HI GCNGC 8 cut(s) 234, 339, 342, 354, 557, 659, 716, 1689
FokI GGATG 3 cut(s) 667, 855, 1720
FriOI GRGCYC 1 cut(s) 334
Fsp4HI GCNGC 8 cut(s) 234, 339, 342, 354, 557, 659, 716, 1689
FspBI CTAG 4 cut(s) 651, 810, 1225, 1831
GlaI GCGC 1 cut(s) 143
GluI GCNGC 8 cut(s) 234, 339, 342, 354, 557, 659, 716, 1689
GsuI CTGGAG 1 cut(s) 112
HaeII RGCGCY 1 cut(s) 145
HaeIII GGCC 2 cut(s) 637, 1603
HapII CCGG 4 cut(s) 217, 247, 435, 1209
HgaI GACGC 1 cut(s) 1790
HhaI GCGC 1 cut(s) 144
Hin1II CATG 6 cut(s) 735, 956, 1127, 1222, 1520, 1608
Hin6I GCGC 1 cut(s) 142
HinP1I GCGC 1 cut(s) 142
HincII GTYRAC 3 cut(s) 695, 1805, 1858
HindII GTYRAC 3 cut(s) 695, 1805, 1858
HinfI GANTC 8 cut(s) 132, 225, 459, 728, 1164, 1241, 1416, 1458
HpaII CCGG 4 cut(s) 217, 247, 435, 1209
HphI GGTGA 4 cut(s) 419, 516, 771, 845
Hpy166II GTNNAC 5 cut(s) 71, 695, 1695, 1805, 1858
Hpy188III TCNNGA 6 cut(s) 88, 129, 247, 386, 474, 1517
Hpy8I GTNNAC 5 cut(s) 71, 695, 1695, 1805, 1858
Hpy99I CGWCG 3 cut(s) 204, 207, 1806
HpyCH4III ACNGT 7 cut(s) 114, 282, 584, 672, 884, 1141, 1153
HpyCH4IV ACGT 4 cut(s) 419, 706, 1182, 1597
HpyF10VI GCNNNNNNNGC 3 cut(s) 338, 350, 1915
HpyF3I CTNAG 3 cut(s) 10, 403, 1612
HpySE526I ACGT 4 cut(s) 419, 706, 1182, 1597
Hsp92II CATG 6 cut(s) 735, 956, 1127, 1222, 1520, 1608
HspAI GCGC 1 cut(s) 142
Kpn2I TCCGGA 1 cut(s) 246
Ksp22I TGATCA 1 cut(s) 1592
Kzo9I GATC 7 cut(s) 84, 243, 285, 1035, 1592, 1754, 1844
LmnI GCTCC 3 cut(s) 225, 337, 723
Lsp1109I GCAGC 7 cut(s) 245, 350, 353, 365, 543, 670, 702
LweI GCATC 6 cut(s) 421, 645, 757, 1616, 1698, 1775
MaeI CTAG 4 cut(s) 651, 810, 1225, 1831
MaeII ACGT 4 cut(s) 419, 706, 1182, 1597
MaeIII GTNAC 3 cut(s) 212, 759, 1295
MalI GATC 7 cut(s) 86, 245, 287, 1037, 1594, 1756, 1846
MboI GATC 7 cut(s) 84, 243, 285, 1035, 1592, 1754, 1844
MboII GAAGA 8 cut(s) 377, 908, 1061, 1389, 1429, 1672, 1794, 1898
MfeI CAATTG 2 cut(s) 610, 1201
MflI RGATCY 2 cut(s) 243, 1035
MhlI GDGCHC 3 cut(s) 334, 871, 981
MlsI TGGCCA 1 cut(s) 1603
MluNI TGGCCA 1 cut(s) 1603
MlyI GAGTC 2 cut(s) 1250, 1467
MmeI TCCRAC 2 cut(s) 221, 1486
Mox20I TGGCCA 1 cut(s) 1603
Mph1103I ATGCAT 2 cut(s) 750, 1473
MroI TCCGGA 1 cut(s) 246
MroXI GAANNNNTTC 1 cut(s) 570
MscI TGGCCA 1 cut(s) 1603
MslI CAYNNNNRTG 3 cut(s) 265, 1636, 1653
Msp20I TGGCCA 1 cut(s) 1603
MspA1I CMGCKG 1 cut(s) 402
MspI CCGG 4 cut(s) 217, 247, 435, 1209
MspR9I CCNGG 1 cut(s) 991
MunI CAATTG 2 cut(s) 610, 1201
MvaI CCWGG 1 cut(s) 991
MvnI CGCG 1 cut(s) 1691
MwoI GCNNNNNNNGC 3 cut(s) 338, 350, 1915
NdeI CATATG 1 cut(s) 1467
NdeII GATC 7 cut(s) 84, 243, 285, 1035, 1592, 1754, 1844
NlaIII CATG 6 cut(s) 735, 956, 1127, 1222, 1520, 1608
NlaIV GGNNCC 4 cut(s) 221, 245, 1011, 1529
NmuCI GTSAC 2 cut(s) 759, 1295
NsiI ATGCAT 2 cut(s) 750, 1473
NspV TTCGAA 1 cut(s) 77
PagI TCATGA 1 cut(s) 1516
PdmI GAANNNNTTC 1 cut(s) 570
PfeI GAWTC 6 cut(s) 132, 225, 459, 728, 1164, 1416
PkrI GCNGC 8 cut(s) 235, 340, 343, 355, 558, 660, 717, 1690
PleI GAGTC 2 cut(s) 1249, 1466
PpsI GAGTC 2 cut(s) 1249, 1466
PshBI ATTAAT 1 cut(s) 619
Psp124BI GAGCTC 1 cut(s) 334
Psp6I CCWGG 1 cut(s) 989
PspGI CCWGG 1 cut(s) 989
PspN4I GGNNCC 4 cut(s) 221, 245, 1011, 1529
PspPI GGNCC 2 cut(s) 90, 636
PstI CTGCAG 2 cut(s) 340, 1284
PsuI RGATCY 2 cut(s) 243, 1035
PvuII CAGCTG 1 cut(s) 402
RsaI GTAC 7 cut(s) 70, 1046, 1122, 1181, 1352, 1643, 1941
RsaNI GTAC 7 cut(s) 69, 1045, 1121, 1180, 1351, 1642, 1940
RseI CAYNNNNRTG 3 cut(s) 265, 1636, 1653
SacI GAGCTC 1 cut(s) 334
SalI GTCGAC 2 cut(s) 693, 1803
SatI GCNGC 8 cut(s) 234, 339, 342, 354, 557, 659, 716, 1689
Sau3AI GATC 7 cut(s) 84, 243, 285, 1035, 1592, 1754, 1844
Sau96I GGNCC 2 cut(s) 90, 636
SchI GAGTC 2 cut(s) 1250, 1467
ScrFI CCNGG 1 cut(s) 991
SduI GDGCHC 3 cut(s) 334, 871, 981
SfaNI GCATC 6 cut(s) 421, 645, 757, 1616, 1698, 1775
SfcI CTRYAG 5 cut(s) 336, 883, 1039, 1175, 1280
SfuI TTCGAA 1 cut(s) 77
SinI GGWCC 1 cut(s) 90
SmiMI CAYNNNNRTG 3 cut(s) 265, 1636, 1653
SmlI CTYRAG 1 cut(s) 137
SmoI CTYRAG 1 cut(s) 137
SsiI CCGC 4 cut(s) 208, 315, 321, 1689
SspI AATATT 2 cut(s) 970, 1306
SspMI CTAG 4 cut(s) 651, 810, 1225, 1831
SstI GAGCTC 1 cut(s) 334
StyD4I CCNGG 1 cut(s) 989
TaaI ACNGT 7 cut(s) 114, 282, 584, 672, 884, 1141, 1153
TaiI ACGT 4 cut(s) 422, 709, 1185, 1600
TaqII GACCGA 1 cut(s) 1344
TauI GCSGC 1 cut(s) 1691
TfiI GAWTC 6 cut(s) 132, 225, 459, 728, 1164, 1416
TscAI CASTG 2 cut(s) 1641, 1765
TseFI GTSAC 2 cut(s) 759, 1295
TseI GCWGC 7 cut(s) 233, 338, 341, 353, 556, 658, 715
Tsp45I GTSAC 2 cut(s) 759, 1295
TspDTI ATGAA 7 cut(s) 637, 720, 769, 852, 1348, 1533, 1572
TspGWI ACGGA 2 cut(s) 56, 1927
TspRI CASTG 2 cut(s) 1641, 1765
VpaK11BI GGWCC 1 cut(s) 90
VspI ATTAAT 1 cut(s) 619
XapI RAATTY 5 cut(s) 79, 368, 450, 570, 1335
XmiI GTMKAC 2 cut(s) 694, 1804
XmnI GAANNNNTTC 1 cut(s) 570
XspI CTAG 4 cut(s) 651, 810, 1225, 1831
Zsp2I ATGCAT 2 cut(s) 750, 1473
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.