Rw1G007170

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000030
Physical Location & Seq
Forward (+)
15074813 .. 15076733
1921 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G007170.1

Sequence Viewer

Length: 1467 bp
ATGGAAGCGAACCATAGTATGGAAGATGGATGGAAGAGAAATCGTGATCTTTCCCGAAGCAGGAACGATGCACTCTGCGCTATTGACACGCAAACTGAAGGTAATGACCGGAAGCGGAAGAATGAAAAGCATAATGAAGAAAACAAGGTGACCGAGACTGTCGTTGAAGTGTCAACTGGGTCAGGAATTGATGATTGTATGACATTATCTGGTGGTAACGAAGAATCAGGCAGTCAGGTTACAATGAGGACAGCATGCCGAGGAAAACACTTCACAAAAACTATGTCTTCCCTATCGGCTGGAAAGTTAGTTGCAACAATAGAAATGGGGTTTGGATCACTTTACCAATTTGGCTGTACCAAAGTGAATCTCCCACTTTGTCAAATACTGGTTGAAAATTTTGACGTGGCGAACTCAAGCATCAAGATTCATGGAAGGAGCCTGACAATCAAACATGAAGACTTTGAACGCATAATGGGCGTAAGGAATGGAGGTTGTGATGTGGAGGTTGAAGGAAACACCGAGGACCCTGATATTTTGGCCATGGAGAGGAAGATTTCGAGGAAGGAGAATCAGATAACAATACATGGATTGAGGAGGGTGCTCATTGAATCTGAAAGCGCTGATGAGACATTTAGGATCAACTTTGCCTTGTATGCCCTTGCAACCCTGCTATGCCCAGTAACAGGAATCCAAGCGGAACGAAGTTACCTTATACCACTTAAGGATCCAAATGCACTGTGTTCAAAAAACTGGGCAAAGTTTGCTTTTGATAAGCTCGTTGAAGGGGTGTCATCGTTTCAGGGCACGAGGATTAGATTGGCCGGAGATTGTATTCTGTATTTCTGTTCCTTCAATTGTTCTACCTGGACGTTCAACGACATGTTTGTTTTGCCGAAGATCGTGAAGCCGGTTATGTGTTGGGGCATGAACGAGGCGAAGAAAGTTTATGAGCAGGTGGAGAGCATGGGCGGATGGAAAAGTGAGATTTACGTGACAAAGAGGTATCTGTGGGACAGAACAATTCAGTACAGTGGATCGTTTGATGCCAGCACAGGGATAAAAACCAATGTGGTGGAAGACTTGTCAGAAGTAAGGCCTGAGGTGGGTGTTGTTAAAGGGGACATCGAGAATCTGAAGTCAACAGTCAGTCGATTGGAACAGGATATGGGCCTTTTGAGAAGCGCAATTATGATGTTAGAAACATCGCTTGATCAGCAGAAGGCTGAGGGCCTCTCCCAGCTTGTGTCAGACGCTATGAAAGGAGTGTTTGAGGATAAGCAGAGTGATTATGTTGGCAATGATGGGAGTGATGATTTTGCTAATGGTCAAAAGCAGCAGGGTCCAGAAGTTGAGTCAGATGACGATGGGATGCCTAATGCTGAGTCAAAAATTGTCATATCCAATGAGGTGGTACCATACCTAGATCGCAGAACTGAAAATGACATAAGTGAACAGACAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

488

Amino Acids

54.46

Weight (kDa)

4.97

Isoelectric Point (pI)

39.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 946
Acc36I ACCTGC 1 cut(s) 946
Acc65I GGTACC 1 cut(s) 1414
AccB1I GGYRCC 1 cut(s) 1414
AccB7I CCANNNNNTGG 1 cut(s) 19
AciI CCGC 3 cut(s) 115, 698, 972
AclWI GGATC 5 cut(s) 343, 647, 722, 735, 1045
AcoI YGGCCR 2 cut(s) 540, 822
AcsI RAATTY 1 cut(s) 397
AcuI CTGAAG 2 cut(s) 117, 1157
AfaI GTAC 3 cut(s) 358, 1031, 1416
AfeI AGCGCT 1 cut(s) 622
AfiI CCNNNNNNNGG 6 cut(s) 19, 60, 549, 686, 1056, 1106
AflII CTTAAG 1 cut(s) 722
AflIII ACRYGT 1 cut(s) 882
AgsI TTSAA 9 cut(s) 167, 395, 467, 512, 611, 747, 785, 856, 877
AjiI CACGTC 1 cut(s) 406
AjnI CCWGG 1 cut(s) 866
AjuI GAANNNNNNNTTGG 2 cut(s) 315, 347
AluBI AGCT 2 cut(s) 778, 1243
AluI AGCT 2 cut(s) 778, 1243
Alw21I GWGCWC 1 cut(s) 606
Alw26I GTCTC 2 cut(s) 149, 623
AlwI GGATC 5 cut(s) 343, 647, 722, 735, 1045
Aor51HI AGCGCT 1 cut(s) 622
AoxI GGCC 5 cut(s) 540, 822, 1097, 1171, 1231
ApeKI GCWGC 1 cut(s) 1336
ApoI RAATTY 1 cut(s) 397
ArsI GACNNNNNNTTYG 2 cut(s) 269, 301
Asp718I GGTACC 1 cut(s) 1414
AspLEI GCGC 3 cut(s) 80, 623, 1187
AspS9I GGNCC 4 cut(s) 526, 1171, 1231, 1343
AsuHPI GGTGA 1 cut(s) 160
AvaII GGWCC 2 cut(s) 526, 1343
AxyI CCTNAGG 1 cut(s) 1101
BaeGI GKGCMC 1 cut(s) 809
BalI TGGCCA 1 cut(s) 542
BamHI GGATCC 1 cut(s) 727
BanI GGYRCC 1 cut(s) 1414
BauI CACGAG 1 cut(s) 808
BbsI GAAGAC 3 cut(s) 279, 465, 1086
Bbv12I GWGCWC 1 cut(s) 606
BbvCI CCTCAGC 1 cut(s) 1227
BbvI GCAGC 1 cut(s) 1348
BccI CCATC 5 cut(s) 20, 24, 969, 1298, 1361
BciT130I CCWGG 1 cut(s) 868
BclI TGATCA 1 cut(s) 1213
BcoDI GTCTC 2 cut(s) 149, 623
BfaI CTAG 1 cut(s) 1424
BfoI RGCGCY 1 cut(s) 624
BfrI CTTAAG 1 cut(s) 722
BfuAI ACCTGC 1 cut(s) 946
BisI GCNGC 1 cut(s) 1337
BlsI GCNGC 1 cut(s) 1338
Bme1390I CCNGG 1 cut(s) 868
Bme18I GGWCC 2 cut(s) 526, 1343
BmgBI CACGTC 1 cut(s) 406
BmgT120I GGNCC 4 cut(s) 526, 1171, 1231, 1343
BmiI GGNNCC 5 cut(s) 440, 528, 729, 1344, 1416
BmrFI CCNGG 1 cut(s) 868
BmrI ACTGGG 3 cut(s) 186, 674, 763
BmsI GCATC 4 cut(s) 58, 429, 1036, 1362
BmuI ACTGGG 3 cut(s) 186, 674, 763
BpiI GAAGAC 3 cut(s) 279, 465, 1086
BplI GAGNNNNNCTC 2 cut(s) 1220, 1252
Bpu10I CCTNAGC 1 cut(s) 1227
BpuEI CTTGAG 1 cut(s) 400
BsaAI YACGTR 1 cut(s) 994
BsaJI CCNNGG 3 cut(s) 259, 522, 543
BsaWI WCCGGW 1 cut(s) 108
Bsc4I CCNNNNNNNGG 6 cut(s) 19, 60, 549, 686, 1056, 1106
Bse118I RCCGGY 1 cut(s) 910
Bse1I ACTGG 4 cut(s) 181, 393, 680, 758
Bse21I CCTNAGG 1 cut(s) 1101
Bse3DI GCAATG 1 cut(s) 1306
BseBI CCWGG 1 cut(s) 868
BseDI CCNNGG 3 cut(s) 259, 522, 543
BseGI GGATG 3 cut(s) 35, 980, 1377
BseLI CCNNNNNNNGG 6 cut(s) 19, 60, 549, 686, 1056, 1106
BseMI GCAATG 1 cut(s) 1306
BseMII CTCAG 3 cut(s) 1092, 1218, 1374
BseNI ACTGG 4 cut(s) 181, 393, 680, 758
BseRI GAGGAG 1 cut(s) 610
BseSI GKGCMC 1 cut(s) 809
BseXI GCAGC 1 cut(s) 1348
BseYI CCCAGC 1 cut(s) 1239
BshFI GGCC 5 cut(s) 542, 824, 1099, 1173, 1233
BshNI GGYRCC 1 cut(s) 1414
BsiHKAI GWGCWC 1 cut(s) 606
BsiSI CCGG 3 cut(s) 109, 825, 911
BslFI GGGAC 2 cut(s) 1028, 1136
BslI CCNNNNNNNGG 6 cut(s) 19, 60, 549, 686, 1056, 1106
BsmAI GTCTC 2 cut(s) 149, 623
BsmFI GGGAC 2 cut(s) 1028, 1136
BsnI GGCC 5 cut(s) 542, 824, 1099, 1173, 1233
Bsp1286I GDGCHC 2 cut(s) 606, 809
Bsp143I GATC 8 cut(s) 46, 335, 639, 727, 900, 1037, 1213, 1426
Bsp19I CCATGG 1 cut(s) 543
BspACI CCGC 3 cut(s) 115, 698, 972
BspANI GGCC 5 cut(s) 542, 824, 1099, 1173, 1233
BspCNI CTCAG 3 cut(s) 1093, 1219, 1375
BspLI GGNNCC 5 cut(s) 440, 528, 729, 1344, 1416
BspMI ACCTGC 1 cut(s) 946
BspPI GGATC 5 cut(s) 343, 647, 722, 735, 1045
BspT107I GGYRCC 1 cut(s) 1414
BspTI CTTAAG 1 cut(s) 722
BsrDI GCAATG 1 cut(s) 1306
BsrFI RCCGGY 1 cut(s) 910
BsrI ACTGG 4 cut(s) 181, 393, 680, 758
BssAI RCCGGY 1 cut(s) 910
BssECI CCNNGG 3 cut(s) 259, 522, 543
BssMI GATC 8 cut(s) 46, 335, 639, 727, 900, 1037, 1213, 1426
BssSI CACGAG 1 cut(s) 808
BssT1I CCWWGG 1 cut(s) 543
Bst2BI CACGAG 1 cut(s) 808
Bst2UI CCWGG 1 cut(s) 868
Bst4CI ACNGT 4 cut(s) 160, 741, 1034, 1147
Bst6I CTCTTC 1 cut(s) 29
BstAFI CTTAAG 1 cut(s) 722
BstAPI GCANNNNNTGC 1 cut(s) 764
BstBAI YACGTR 1 cut(s) 994
BstC8I GCNNGC 2 cut(s) 256, 1051
BstDEI CTNAG 3 cut(s) 1101, 1227, 1383
BstDSI CCRYGG 1 cut(s) 543
BstEII GGTNACC 1 cut(s) 148
BstF5I GGATG 3 cut(s) 35, 980, 1377
BstH2I RGCGCY 1 cut(s) 624
BstHHI GCGC 3 cut(s) 80, 623, 1187
BstKTI GATC 8 cut(s) 49, 338, 642, 730, 903, 1040, 1216, 1429
BstMAI GTCTC 2 cut(s) 149, 623
BstMBI GATC 8 cut(s) 46, 335, 639, 727, 900, 1037, 1213, 1426
BstMWI GCNNNNNNNGC 5 cut(s) 77, 477, 656, 764, 1216
BstNI CCWGG 1 cut(s) 868
BstNSI RCATGY 2 cut(s) 258, 886
BstPI GGTNACC 1 cut(s) 148
BstSCI CCNGG 1 cut(s) 866
BstSLI GKGCMC 1 cut(s) 809
BstV1I GCAGC 1 cut(s) 1348
BstV2I GAAGAC 3 cut(s) 279, 465, 1086
BstX2I RGATCY 1 cut(s) 727
BstXI CCANNNNNNTGG 2 cut(s) 1075, 1411
BstYI RGATCY 1 cut(s) 727
Bsu36I CCTNAGG 1 cut(s) 1101
BsuRI GGCC 5 cut(s) 542, 824, 1099, 1173, 1233
BtgI CCRYGG 1 cut(s) 543
BtgZI GCGATG 1 cut(s) 1191
BtrI CACGTC 1 cut(s) 406
BtsCI GGATG 3 cut(s) 35, 980, 1377
BtsIMutI CAGTG 2 cut(s) 737, 1039
BveI ACCTGC 1 cut(s) 946
Cac8I GCNNGC 2 cut(s) 256, 1051
CfoI GCGC 3 cut(s) 80, 623, 1187
Cfr10I RCCGGY 1 cut(s) 910
Cfr13I GGNCC 4 cut(s) 526, 1171, 1231, 1343
CseI GACGC 1 cut(s) 1262
Csp6I GTAC 3 cut(s) 357, 1030, 1415
CviAII CATG 8 cut(s) 255, 431, 455, 544, 587, 883, 928, 967
CviQI GTAC 3 cut(s) 357, 1030, 1415
DdeI CTNAG 3 cut(s) 1101, 1227, 1383
DpnI GATC 8 cut(s) 48, 337, 641, 729, 902, 1039, 1215, 1428
DpnII GATC 8 cut(s) 46, 335, 639, 727, 900, 1037, 1213, 1426
EaeI YGGCCR 2 cut(s) 540, 822
Eam1104I CTCTTC 1 cut(s) 29
EarI CTCTTC 1 cut(s) 29
EciI GGCGGA 1 cut(s) 987
Eco130I CCWWGG 1 cut(s) 543
Eco147I AGGCCT 1 cut(s) 1099
Eco47I GGWCC 2 cut(s) 526, 1343
Eco47III AGCGCT 1 cut(s) 622
Eco57I CTGAAG 2 cut(s) 117, 1157
Eco81I CCTNAGG 1 cut(s) 1101
Eco91I GGTNACC 1 cut(s) 148
EcoO109I RGGNCCY 2 cut(s) 526, 1231
EcoO65I GGTNACC 1 cut(s) 148
EcoRII CCWGG 1 cut(s) 866
EcoT14I CCWWGG 1 cut(s) 543
ErhI CCWWGG 1 cut(s) 543
FaeI CATG 8 cut(s) 258, 434, 458, 547, 590, 886, 931, 970
FaqI GGGAC 2 cut(s) 1028, 1136
FatI CATG 8 cut(s) 254, 430, 454, 543, 586, 882, 927, 966
FbaI TGATCA 1 cut(s) 1213
Fnu4HI GCNGC 1 cut(s) 1337
FokI GGATG 3 cut(s) 42, 987, 1384
Fsp4HI GCNGC 1 cut(s) 1337
FspBI CTAG 1 cut(s) 1424
GlaI GCGC 3 cut(s) 79, 622, 1186
GluI GCNGC 1 cut(s) 1337
GsaI CCCAGC 1 cut(s) 1243
HaeII RGCGCY 1 cut(s) 624
HaeIII GGCC 5 cut(s) 542, 824, 1099, 1173, 1233
HapII CCGG 3 cut(s) 109, 825, 911
HgaI GACGC 1 cut(s) 1262
HhaI GCGC 3 cut(s) 80, 623, 1187
Hin1II CATG 8 cut(s) 258, 434, 458, 547, 590, 886, 931, 970
Hin6I GCGC 3 cut(s) 78, 621, 1185
HinP1I GCGC 3 cut(s) 78, 621, 1185
HincII GTYRAC 2 cut(s) 174, 1143
HindII GTYRAC 2 cut(s) 174, 1143
HinfI GANTC 9 cut(s) 224, 367, 427, 571, 611, 690, 1132, 1355, 1385
HpaII CCGG 3 cut(s) 109, 825, 911
HphI GGTGA 1 cut(s) 160
Hpy166II GTNNAC 3 cut(s) 174, 1143, 1454
Hpy188I TCNGA 6 cut(s) 576, 616, 1090, 1137, 1252, 1360
Hpy188III TCNNGA 7 cut(s) 44, 54, 183, 424, 904, 1129, 1346
Hpy8I GTNNAC 3 cut(s) 174, 1143, 1454
HpyAV CCTTC 7 cut(s) 92, 429, 506, 559, 779, 862, 1216
HpyCH4III ACNGT 4 cut(s) 160, 741, 1034, 1147
HpyCH4IV ACGT 3 cut(s) 405, 872, 993
HpyCH4V TGCA 4 cut(s) 71, 314, 665, 737
HpyF10VI GCNNNNNNNGC 5 cut(s) 77, 477, 656, 764, 1216
HpyF3I CTNAG 3 cut(s) 1101, 1227, 1383
HpySE526I ACGT 3 cut(s) 405, 872, 993
Hsp92II CATG 8 cut(s) 258, 434, 458, 547, 590, 886, 931, 970
HspAI GCGC 3 cut(s) 78, 621, 1185
KpnI GGTACC 1 cut(s) 1418
Ksp22I TGATCA 1 cut(s) 1213
Kzo9I GATC 8 cut(s) 46, 335, 639, 727, 900, 1037, 1213, 1426
LmnI GCTCC 1 cut(s) 438
Lsp1109I GCAGC 1 cut(s) 1348
LweI GCATC 4 cut(s) 58, 429, 1036, 1362
MaeI CTAG 1 cut(s) 1424
MaeII ACGT 3 cut(s) 405, 872, 993
MaeIII GTNAC 6 cut(s) 148, 215, 238, 682, 707, 994
MalI GATC 8 cut(s) 48, 337, 641, 729, 902, 1039, 1215, 1428
MboI GATC 8 cut(s) 46, 335, 639, 727, 900, 1037, 1213, 1426
MfeI CAATTG 1 cut(s) 856
MflI RGATCY 1 cut(s) 727
MhlI GDGCHC 2 cut(s) 606, 809
MlsI TGGCCA 1 cut(s) 542
MluCI AATT 7 cut(s) 186, 347, 397, 856, 1023, 1188, 1392
MluNI TGGCCA 1 cut(s) 542
MlyI GAGTC 2 cut(s) 1364, 1394
Mox20I TGGCCA 1 cut(s) 542
MscI TGGCCA 1 cut(s) 542
MseI TTAA 2 cut(s) 723, 1116
Msp20I TGGCCA 1 cut(s) 542
MspCI CTTAAG 1 cut(s) 722
MspI CCGG 3 cut(s) 109, 825, 911
MspR9I CCNGG 1 cut(s) 868
MunI CAATTG 1 cut(s) 856
MvaI CCWGG 1 cut(s) 868
MwoI GCNNNNNNNGC 5 cut(s) 77, 477, 656, 764, 1216
NcoI CCATGG 1 cut(s) 543
NdeII GATC 8 cut(s) 46, 335, 639, 727, 900, 1037, 1213, 1426
NlaIII CATG 8 cut(s) 258, 434, 458, 547, 590, 886, 931, 970
NlaIV GGNNCC 5 cut(s) 440, 528, 729, 1344, 1416
NmeAIII GCCGAG 1 cut(s) 284
NmuCI GTSAC 2 cut(s) 148, 994
NspI RCATGY 2 cut(s) 258, 886
PaeI GCATGC 1 cut(s) 258
PaqCI CACCTGC 1 cut(s) 946
PceI AGGCCT 1 cut(s) 1099
PciI ACATGT 1 cut(s) 882
PfeI GAWTC 7 cut(s) 224, 367, 427, 571, 611, 690, 1132
PflMI CCANNNNNTGG 1 cut(s) 19
PkrI GCNGC 1 cut(s) 1338
PleI GAGTC 2 cut(s) 1363, 1393
PpsI GAGTC 2 cut(s) 1363, 1393
Ppu21I YACGTR 1 cut(s) 994
PpuMI RGGWCCY 1 cut(s) 526
PscI ACATGT 1 cut(s) 882
Psp5II RGGWCCY 1 cut(s) 526
Psp6I CCWGG 1 cut(s) 866
PspEI GGTNACC 1 cut(s) 148
PspFI CCCAGC 1 cut(s) 1239
PspGI CCWGG 1 cut(s) 866
PspN4I GGNNCC 5 cut(s) 440, 528, 729, 1344, 1416
PspPI GGNCC 4 cut(s) 526, 1171, 1231, 1343
PspPPI RGGWCCY 1 cut(s) 526
PsuI RGATCY 1 cut(s) 727
RsaI GTAC 3 cut(s) 358, 1031, 1416
RsaNI GTAC 3 cut(s) 357, 1030, 1415
SaqAI TTAA 2 cut(s) 723, 1116
SatI GCNGC 1 cut(s) 1337
Sau3AI GATC 8 cut(s) 46, 335, 639, 727, 900, 1037, 1213, 1426
Sau96I GGNCC 4 cut(s) 526, 1171, 1231, 1343
SchI GAGTC 2 cut(s) 1364, 1394
ScrFI CCNGG 1 cut(s) 868
SduI GDGCHC 2 cut(s) 606, 809
SfaNI GCATC 4 cut(s) 58, 429, 1036, 1362
SinI GGWCC 2 cut(s) 526, 1343
SmlI CTYRAG 2 cut(s) 415, 722
SmoI CTYRAG 2 cut(s) 415, 722
SphI GCATGC 1 cut(s) 258
Sse9I AATT 7 cut(s) 186, 347, 397, 856, 1023, 1188, 1392
SseBI AGGCCT 1 cut(s) 1099
SsiI CCGC 3 cut(s) 115, 698, 972
SspMI CTAG 1 cut(s) 1424
StuI AGGCCT 1 cut(s) 1099
StyD4I CCNGG 1 cut(s) 866
StyI CCWWGG 1 cut(s) 543
TaaI ACNGT 4 cut(s) 160, 741, 1034, 1147
TaiI ACGT 3 cut(s) 408, 875, 996
TaqI TCGA 3 cut(s) 560, 1128, 1153
TaqII GACCGA 1 cut(s) 167
TasI AATT 7 cut(s) 186, 347, 397, 856, 1023, 1188, 1392
TatI WGTACW 1 cut(s) 1029
TfiI GAWTC 7 cut(s) 224, 367, 427, 571, 611, 690, 1132
Tru1I TTAA 2 cut(s) 723, 1116
Tru9I TTAA 2 cut(s) 723, 1116
TscAI CASTG 2 cut(s) 744, 1039
TseFI GTSAC 2 cut(s) 148, 994
TseI GCWGC 1 cut(s) 1336
Tsp45I GTSAC 2 cut(s) 148, 994
TspDTI ATGAA 6 cut(s) 138, 150, 419, 471, 944, 1274
TspRI CASTG 2 cut(s) 744, 1039
Van91I CCANNNNNTGG 1 cut(s) 19
Vha464I CTTAAG 1 cut(s) 722
VpaK11BI GGWCC 2 cut(s) 526, 1343
XapI RAATTY 1 cut(s) 397
XceI RCATGY 2 cut(s) 258, 886
XspI CTAG 1 cut(s) 1424
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.