Rw2G031730

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000030
Physical Location & Seq
Reverse (-)
51973931 .. 51976165
2235 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G031730.1

Sequence Viewer

Length: 1032 bp
ATGGAGAGACTACAGTCGACCGTTTCATGTATTGTATCCAATATAGGAGCCATTGGAAGACAATTATTTGATGCGGAACGTTCAATAGTGGTTAGCAAAGGCGCTGGCATCGAAGCAATTGTAACAGAGATATTGAGAGTGATTGGTTCAAATGGAACCAAAGGATGTAAGAGCTACAAAAAAGCTGAAGCATGCATACATTATTTTAGTAATGAAACGTTCCATGACGATGGGAAAACAAAGGTACATGAAAGAGAAGAAATTGGTATTTGCGGAAAGGAGAAGGCGGGACATGAACAGAAACTGGAAACTTTTTCATGGGTTGGAAAAGTTTCTAGAAAGGAATGTAATATGTTGGCTTACTTGATCATAACGAGTGGAATTAGTGAAGAGGAATGGAGGGACGATGTTGCCAAGCTTGGTGATTTTGTGCTGTCACTTGGGGAGATACAGTGTCTATCACCAAATGTTCCACTGTTGTCCAATGTCATTAATATATGGGCAGCATACCTGAATGAAAATGAGTTAAAGAACTGGTTTCTCCCCACATCATTTGCGCTGACAGCAAACTGTCATAATGCCGGGCTTGATGCGAAGGCTTTGGTGGCTTTAACAATTCGAACATGTCGGCTGCGGCAGTTTTATAAGCGACTTAATAAATGCTCCAAGCGTGTTTTTGAGAACGACAGGACAAGATTAAGTGATGTACAATACCATTTTCCCTCATTTGAGTTGAGGGTTGGCCCAAGCAACCCCACCCACTGGAATACTAATGAAAGTGGCATATACGTCATACGTCATATGCAGCACCCTATGACGAATTGGTTTGAAGAGTTTGTTGCTGAGGATCATAGGGAACGTTTGTGCATTGAGACTGTGATGCACCCCAGCAATGAAGTCCTTAAAAAAGTTAAAGCTGCAGCTGAATCGTTTTGCAGTCAAATGGAACCAAATGATGTTTGTAACAATCCCCCCCCCCCCATTTACATGAAAGCATCCGCGATGACCCCGTTATGCTTCAGACCAAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

343

Amino Acids

38.85

Weight (kDa)

7.13

Isoelectric Point (pI)

43.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 645
AccB7I CCANNNNNTGG 1 cut(s) 762
AccI GTMKAC 1 cut(s) 17
AccII CGCG 1 cut(s) 1001
AciI CCGC 5 cut(s) 74, 273, 287, 634, 999
AclI AACGTT 3 cut(s) 79, 218, 859
AclWI GGATC 1 cut(s) 855
AcuI CTGAAG 2 cut(s) 207, 1003
AfaI GTAC 2 cut(s) 246, 708
AfiI CCNNNNNNNGG 1 cut(s) 762
AflIII ACRYGT 1 cut(s) 623
AgsI TTSAA 3 cut(s) 84, 150, 830
AluBI AGCT 5 cut(s) 174, 185, 418, 917, 923
AluI AGCT 5 cut(s) 174, 185, 418, 917, 923
Alw26I GTCTC 1 cut(s) 866
AlwI GGATC 1 cut(s) 855
AlwNI CAGNNNCTG 1 cut(s) 304
AoxI GGCC 1 cut(s) 742
ApeKI GCWGC 5 cut(s) 503, 631, 805, 917, 920
AseI ATTAAT 1 cut(s) 492
Asp700I GAANNNNTTC 1 cut(s) 331
AspLEI GCGC 2 cut(s) 104, 559
AspS9I GGNCC 1 cut(s) 743
AsuC2I CCSGG 1 cut(s) 583
AsuHPI GGTGA 2 cut(s) 434, 453
AsuII TTCGAA 1 cut(s) 619
BarI GAAGNNNNNNTAC 2 cut(s) 180, 212
BbsI GAAGAC 1 cut(s) 64
BbvCI CCTCAGC 1 cut(s) 843
BbvI GCAGC 5 cut(s) 515, 618, 817, 904, 932
BccI CCATC 1 cut(s) 224
BcgI CGANNNNNNTGC 2 cut(s) 909, 943
BciVI GTATCC 1 cut(s) 46
BclI TGATCA 1 cut(s) 366
BcnI CCSGG 1 cut(s) 583
BcoDI GTCTC 1 cut(s) 866
BfaI CTAG 1 cut(s) 336
BfmI CTRYAG 2 cut(s) 11, 918
BfoI RGCGCY 1 cut(s) 105
BfuI GTATCC 1 cut(s) 46
BisI GCNGC 6 cut(s) 504, 632, 635, 806, 918, 921
BlsI GCNGC 6 cut(s) 505, 633, 636, 807, 919, 922
Bme1390I CCNGG 1 cut(s) 583
BmgT120I GGNCC 1 cut(s) 743
BmiI GGNNCC 3 cut(s) 49, 157, 948
BmrFI CCNGG 1 cut(s) 583
BmsI GCATC 5 cut(s) 61, 117, 580, 870, 1004
BoxI GACNNNNGTC 1 cut(s) 13
BpiI GAAGAC 1 cut(s) 64
Bpu10I CCTNAGC 1 cut(s) 843
Bpu14I TTCGAA 1 cut(s) 619
BpuMI CCSGG 1 cut(s) 583
BsaXI ACNNNNNCTCC 2 cut(s) 437, 467
Bsc4I CCNNNNNNNGG 1 cut(s) 762
Bse1I ACTGG 3 cut(s) 309, 539, 767
Bse3DI GCAATG 1 cut(s) 898
BseGI GGATG 2 cut(s) 170, 995
BseLI CCNNNNNNNGG 1 cut(s) 762
BseMI GCAATG 1 cut(s) 898
BseMII CTCAG 1 cut(s) 834
BseNI ACTGG 3 cut(s) 309, 539, 767
BseXI GCAGC 5 cut(s) 515, 618, 817, 904, 932
BseYI CCCAGC 1 cut(s) 887
Bsh1236I CGCG 1 cut(s) 1001
Bsh1285I CGRYCG 1 cut(s) 21
BshFI GGCC 1 cut(s) 744
BsiEI CGRYCG 1 cut(s) 21
BsiSI CCGG 1 cut(s) 582
BslFI GGGAC 2 cut(s) 303, 416
BslI CCNNNNNNNGG 1 cut(s) 762
BsmAI GTCTC 1 cut(s) 866
BsmFI GGGAC 2 cut(s) 303, 416
BsnI GGCC 1 cut(s) 744
Bsp119I TTCGAA 1 cut(s) 619
Bsp1407I TGTACA 1 cut(s) 706
Bsp143I GATC 2 cut(s) 366, 847
BspACI CCGC 5 cut(s) 74, 273, 287, 634, 999
BspANI GGCC 1 cut(s) 744
BspCNI CTCAG 1 cut(s) 835
BspFNI CGCG 1 cut(s) 1001
BspLI GGNNCC 3 cut(s) 49, 157, 948
BspMAI CTGCAG 1 cut(s) 922
BspPI GGATC 1 cut(s) 855
BspT104I TTCGAA 1 cut(s) 619
BsrDI GCAATG 1 cut(s) 898
BsrGI TGTACA 1 cut(s) 706
BsrI ACTGG 3 cut(s) 309, 539, 767
BssMI GATC 2 cut(s) 366, 847
Bst4CI ACNGT 6 cut(s) 15, 22, 453, 477, 572, 877
Bst6I CTCTTC 2 cut(s) 384, 825
BstAUI TGTACA 1 cut(s) 706
BstBI TTCGAA 1 cut(s) 619
BstC8I GCNNGC 2 cut(s) 106, 193
BstDEI CTNAG 1 cut(s) 843
BstF5I GGATG 2 cut(s) 170, 995
BstFNI CGCG 1 cut(s) 1001
BstH2I RGCGCY 1 cut(s) 105
BstHHI GCGC 2 cut(s) 104, 559
BstKTI GATC 2 cut(s) 369, 850
BstMAI GTCTC 1 cut(s) 866
BstMBI GATC 2 cut(s) 366, 847
BstMCI CGRYCG 1 cut(s) 21
BstMWI GCNNNNNNNGC 2 cut(s) 563, 605
BstNSI RCATGY 2 cut(s) 195, 627
BstPAI GACNNNNGTC 1 cut(s) 13
BstSCI CCNGG 1 cut(s) 581
BstSFI CTRYAG 2 cut(s) 11, 918
BstUI CGCG 1 cut(s) 1001
BstV1I GCAGC 5 cut(s) 515, 618, 817, 904, 932
BstV2I GAAGAC 1 cut(s) 64
BstXI CCANNNNNNTGG 1 cut(s) 230
BsuI GTATCC 1 cut(s) 46
BsuRI GGCC 1 cut(s) 744
BtgZI GCGATG 1 cut(s) 1016
BtsCI GGATG 2 cut(s) 170, 995
BtsIMutI CAGTG 3 cut(s) 458, 473, 760
Cac8I GCNNGC 2 cut(s) 106, 193
CaiI CAGNNNCTG 1 cut(s) 304
CfoI GCGC 2 cut(s) 104, 559
Cfr13I GGNCC 1 cut(s) 743
Csp6I GTAC 2 cut(s) 245, 707
CspCI CAANNNNNGTGG 2 cut(s) 535, 570
CviAII CATG 8 cut(s) 27, 192, 224, 248, 293, 318, 624, 988
CviQI GTAC 2 cut(s) 245, 707
DdeI CTNAG 1 cut(s) 843
DpnI GATC 2 cut(s) 368, 849
DpnII GATC 2 cut(s) 366, 847
Eam1104I CTCTTC 2 cut(s) 384, 825
EarI CTCTTC 2 cut(s) 384, 825
Eco57I CTGAAG 2 cut(s) 207, 1003
EcoT22I ATGCAT 1 cut(s) 197
FaeI CATG 8 cut(s) 30, 195, 227, 251, 296, 321, 627, 991
FaqI GGGAC 2 cut(s) 303, 416
FatI CATG 8 cut(s) 26, 191, 223, 247, 292, 317, 623, 987
FauI CCCGC 1 cut(s) 280
FauNDI CATATG 1 cut(s) 801
FbaI TGATCA 1 cut(s) 366
FblI GTMKAC 1 cut(s) 17
Fnu4HI GCNGC 6 cut(s) 504, 632, 635, 806, 918, 921
FokI GGATG 2 cut(s) 177, 982
Fsp4HI GCNGC 6 cut(s) 504, 632, 635, 806, 918, 921
FspBI CTAG 1 cut(s) 336
GlaI GCGC 2 cut(s) 103, 558
GluI GCNGC 6 cut(s) 504, 632, 635, 806, 918, 921
GsaI CCCAGC 1 cut(s) 891
HaeII RGCGCY 1 cut(s) 105
HaeIII GGCC 1 cut(s) 744
HapII CCGG 1 cut(s) 582
HhaI GCGC 2 cut(s) 104, 559
Hin1II CATG 8 cut(s) 30, 195, 227, 251, 296, 321, 627, 991
Hin6I GCGC 2 cut(s) 102, 557
HinP1I GCGC 2 cut(s) 102, 557
HincII GTYRAC 1 cut(s) 18
HindII GTYRAC 1 cut(s) 18
HindIII AAGCTT 1 cut(s) 416
HinfI GANTC 1 cut(s) 926
HpaII CCGG 1 cut(s) 582
HphI GGTGA 2 cut(s) 434, 453
Hpy166II GTNNAC 1 cut(s) 18
Hpy188I TCNGA 1 cut(s) 1022
Hpy188III TCNNGA 1 cut(s) 336
Hpy8I GTNNAC 1 cut(s) 18
HpyAV CCTTC 2 cut(s) 277, 589
HpyCH4III ACNGT 6 cut(s) 15, 22, 453, 477, 572, 877
HpyCH4IV ACGT 5 cut(s) 79, 218, 789, 796, 859
HpyCH4V TGCA 6 cut(s) 195, 805, 867, 883, 920, 936
HpyF10VI GCNNNNNNNGC 2 cut(s) 563, 605
HpyF3I CTNAG 1 cut(s) 843
HpySE526I ACGT 5 cut(s) 79, 218, 789, 796, 859
Hsp92II CATG 8 cut(s) 30, 195, 227, 251, 296, 321, 627, 991
HspAI GCGC 2 cut(s) 102, 557
Ksp22I TGATCA 1 cut(s) 366
Kzo9I GATC 2 cut(s) 366, 847
LmnI GCTCC 2 cut(s) 47, 668
LpnPI CCDG 8 cut(s) 90, 290, 520, 524, 595, 673, 748, 901
Lsp1109I GCAGC 5 cut(s) 515, 618, 817, 904, 932
LweI GCATC 5 cut(s) 61, 117, 580, 870, 1004
MaeI CTAG 1 cut(s) 336
MaeII ACGT 5 cut(s) 79, 218, 789, 796, 859
MaeIII GTNAC 3 cut(s) 121, 435, 962
MalI GATC 2 cut(s) 368, 849
MboI GATC 2 cut(s) 366, 847
MboII GAAGA 4 cut(s) 69, 269, 401, 842
MfeI CAATTG 1 cut(s) 117
MluCI AATT 7 cut(s) 62, 117, 261, 381, 615, 820, 1027
MmeI TCCRAC 1 cut(s) 304
MnlI CCTC 5 cut(s) 385, 393, 729, 733, 838
Mph1103I ATGCAT 1 cut(s) 197
MroXI GAANNNNTTC 1 cut(s) 331
MseI TTAA 7 cut(s) 492, 527, 611, 654, 698, 903, 912
MslI CAYNNNNRTG 2 cut(s) 228, 986
MspA1I CMGCKG 1 cut(s) 923
MspI CCGG 1 cut(s) 582
MspR9I CCNGG 1 cut(s) 583
MunI CAATTG 1 cut(s) 117
MvnI CGCG 1 cut(s) 1001
MwoI GCNNNNNNNGC 2 cut(s) 563, 605
NciI CCSGG 1 cut(s) 583
NdeI CATATG 1 cut(s) 801
NdeII GATC 2 cut(s) 366, 847
NlaIII CATG 8 cut(s) 30, 195, 227, 251, 296, 321, 627, 991
NlaIV GGNNCC 3 cut(s) 49, 157, 948
NmuCI GTSAC 1 cut(s) 435
NsiI ATGCAT 1 cut(s) 197
NspI RCATGY 2 cut(s) 195, 627
NspV TTCGAA 1 cut(s) 619
PaeI GCATGC 1 cut(s) 195
PciI ACATGT 1 cut(s) 623
PdmI GAANNNNTTC 1 cut(s) 331
PfeI GAWTC 1 cut(s) 926
PflMI CCANNNNNTGG 1 cut(s) 762
PkrI GCNGC 6 cut(s) 505, 633, 636, 807, 919, 922
PscI ACATGT 1 cut(s) 623
PshAI GACNNNNGTC 1 cut(s) 13
PshBI ATTAAT 1 cut(s) 492
PsiI TTATAA 1 cut(s) 645
Psp1406I AACGTT 3 cut(s) 79, 218, 859
PspFI CCCAGC 1 cut(s) 887
PspN4I GGNNCC 3 cut(s) 49, 157, 948
PspPI GGNCC 1 cut(s) 743
PstI CTGCAG 1 cut(s) 922
PstNI CAGNNNCTG 1 cut(s) 304
PvuII CAGCTG 1 cut(s) 923
RsaI GTAC 2 cut(s) 246, 708
RsaNI GTAC 2 cut(s) 245, 707
RseI CAYNNNNRTG 2 cut(s) 228, 986
SalI GTCGAC 1 cut(s) 16
SaqAI TTAA 7 cut(s) 492, 527, 611, 654, 698, 903, 912
SatI GCNGC 6 cut(s) 504, 632, 635, 806, 918, 921
Sau3AI GATC 2 cut(s) 366, 847
Sau96I GGNCC 1 cut(s) 743
ScrFI CCNGG 1 cut(s) 583
SfaNI GCATC 5 cut(s) 61, 117, 580, 870, 1004
SfcI CTRYAG 2 cut(s) 11, 918
SfuI TTCGAA 1 cut(s) 619
SmiMI CAYNNNNRTG 2 cut(s) 228, 986
SphI GCATGC 1 cut(s) 195
Sse9I AATT 7 cut(s) 62, 117, 261, 381, 615, 820, 1027
SsiI CCGC 5 cut(s) 74, 273, 287, 634, 999
SspMI CTAG 1 cut(s) 336
StyD4I CCNGG 1 cut(s) 581
TaaI ACNGT 6 cut(s) 15, 22, 453, 477, 572, 877
TaiI ACGT 5 cut(s) 82, 221, 792, 799, 862
TaqI TCGA 3 cut(s) 17, 111, 619
TasI AATT 7 cut(s) 62, 117, 261, 381, 615, 820, 1027
TatI WGTACW 1 cut(s) 706
TauI GCSGC 1 cut(s) 637
TfiI GAWTC 1 cut(s) 926
Tru1I TTAA 7 cut(s) 492, 527, 611, 654, 698, 903, 912
Tru9I TTAA 7 cut(s) 492, 527, 611, 654, 698, 903, 912
TscAI CASTG 3 cut(s) 458, 480, 767
TseFI GTSAC 1 cut(s) 435
TseI GCWGC 5 cut(s) 503, 631, 805, 917, 920
Tsp45I GTSAC 1 cut(s) 435
TspDTI ATGAA 9 cut(s) 15, 228, 264, 306, 309, 531, 789, 909, 1004
TspRI CASTG 3 cut(s) 458, 480, 767
Van91I CCANNNNNTGG 1 cut(s) 762
VspI ATTAAT 1 cut(s) 492
XbaI TCTAGA 1 cut(s) 335
XceI RCATGY 2 cut(s) 195, 627
XmiI GTMKAC 1 cut(s) 17
XmnI GAANNNNTTC 1 cut(s) 331
XspI CTAG 1 cut(s) 336
Zsp2I ATGCAT 1 cut(s) 197
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.