Rh5CG497700

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0000030
Physical Location & Seq
Reverse (-)
69221153 .. 69244120
22968 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG497700.1

Sequence Viewer

Length: 2175 bp
ATGGAAGAGGGATGGAAGAGAAATCGTGATCTTTCTCGAAGCAGAAATGATGCGGTCTGCACTGTTGAGACGCAAACAGGAGGTCATGACCGGAAGCGGAAGAACGAAAACCATAATGTTGAAAAGAAGGGAATCGACTCCGCTGTTGTATTATCAAGTGGGTCAGGCATTGATGATTGTATGACATTACCCGGTGGTAAGGAAGAATCAGACAGTCAGGTTACAATCAGGACAGCATGCCGAGGAAAACACTTCACAAAAACTATGTCTTCCCTATCAGCTGGAAAGTTAGTTGCAACAATAGAAATGGGGTTTGGGTCACTTTATGAATTTCGCTGTACTAAAGTGAATCTCCCACTTTGCCAAGTGCTGGTTGAAAATTTTGACGTGGCGAACTCAAGCATCAACATTCATGGAAGGAACCTGACAATCACACATGAAGACTTTGAACGCATAATGGGCGTTAGGAATGGAGGTTGTGATGTGAAGGTTGAAGGAAACACCGAGGACCCTGATATATTGGCCCTGGAGAAGAAGATTTCGGGGAAGGAGAATCAGATAACAATACATGGATTGAGGAGGGTGCTGATTGAGTCTGAAAGCGCTGATGAGATATTTAGGATCAGCTTTGCCTTGTATGCCCTTGCAACCCTGCTATCTCCAGGCACGGGGATTGGATTGGCCGGAGGTTGTATTCTGTTCCTTCAGTTGTTCTATCTGGACGTTGTTAGCAATGGCATGTTGGTTTTGCCAAAGACGGTGAAACCTGTTATGATATGGGGCGCGGACGAGGCAAAGAAAATTTATGAGCAGGTGGAGAGCATGGGGGGATGGAAAAGTGAGTCTGTTTATGTGACAAAGAGTGGATCGGTTGATGCCAGCACAGGGATAAAAACCAATGTCGTGGAAGACTTGTCAGAAGTGATGGCTGATGTGGGTGTCGTTAAAGGGGACATCCGGAATCTAAAGGCAATGGTCGGTCAATTGGGACCGGATATGTGCCGTTTGAGGAGCGCAATTATGACGTTAGAAACATCTCTTGAGAAGCTGAAGGCTGAGGGCCTCTGTCAGCTTGTTTCAGACACTATCATGGGAGTGTTTGAGGATAAGCAGAATGATTATGTGGGCAATGATGGGACTGATGTTTTTGTTGATGGTCAAAAGCAGCATGGTCCAGAATTTGAGTCAGATGACGATGGGATGCCTAATGCTAAATCCAAAATTGTCATTTCCAATGAGGTGGTAGCATACCGGGATCGCAGCACTGAGGTTGAGAGAAGTGAACAGACGAGGTTCGAAGCGGTGGCCGAGATTTCAGAGAGGGATGCATACTTATTGGCATATCTCTTCAGCAAGAAGGTTTCTGCAGACGACAGTTTTGGGAGCAACGAAGTTGCTAGGTTCGAGGATTCAGGTGTATCTCGCTGGGACCTGAGCTGCTTGTCCCCAACGCAGTCGTTGACTGCCGAGGAGCGTGCTAAGGAGATTTCGGCAGGTATGCTAGTGGAAGCTATTGTGCCTTCGACCATTACACTCTGCAAACTGGGAAGATTTATTGGCCGATTATTGTCATGCAATAAGATGTTCCTCCCCATCCATGACGGGGTTGTGAAGCATTGGTTTTTGGCTGTGGTGAACATACCGGACGCCGTGTGTGAAATATGGGACAGCAACCCTGTTGATTCTGCTAATACACGCAGGCAGGAATATGCCATTGCATCGATGTGTTTGCTTGAAAAAGTATTTGGCAATGAACTGCGAATGGCACCCGACCTGTACGCACGGTTTGGATCATTCTCCATTAGTTATCCAGAGTCTTGCCCTCTGCATCCCAGATCTGAAGACTCCGGAATATTTATGAAGGCCCGGCGAGGTAATCTATTCGGTTCTCCACCAAATATCACGGGAGCCACTGGAGCAAATGACCCACCCAATACCCGTGATGTGGCTACGAGATCAACTGAACTTGTTATGGGGGACTTGGTGACAAATTCCAAACCCTATGAGTTCACACTCACCGTATCTGGACTCTCCGTTGAAAAGGTGGCTGCCATAGCTGAGATGGGCTTTGATGGTCTCTTGCAGATTGGATGCAACACTCTTGTTGGACCTGTCTGGAGGCTGATGGTGCACAGTGTTGACCTCGGCAACCGCAGAGTGTCGATAATGGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

724

Amino Acids

79.22

Weight (kDa)

5.19

Isoelectric Point (pI)

42.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_C48 PF02902 525 - 620 4.2e-07 Ulp1 protease family, C-terminal catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 802
Acc36I ACCTGC 2 cut(s) 802, 1484
AccB1I GGYRCC 1 cut(s) 1765
AccB7I CCANNNNNTGG 1 cut(s) 370
AccII CGCG 1 cut(s) 785
AccIII TCCGGA 2 cut(s) 957, 1847
AciI CCGC 6 cut(s) 53, 97, 141, 785, 1301, 2152
AclWI GGATC 4 cut(s) 629, 874, 1263, 1798
AcoI YGGCCR 3 cut(s) 681, 1305, 1558
AcsI RAATTY 5 cut(s) 329, 379, 801, 1178, 1990
AcuI CTGAAG 4 cut(s) 689, 1070, 1333, 1860
AcyI GRCGYC 1 cut(s) 1647
AfaI GTAC 2 cut(s) 340, 1778
AfeI AGCGCT 1 cut(s) 604
AfiI CCNNNNNNNGG 5 cut(s) 370, 668, 885, 1603, 1945
AgsI TTSAA 6 cut(s) 122, 377, 449, 494, 1736, 2039
AjiI CACGTC 1 cut(s) 388
AjnI CCWGG 2 cut(s) 525, 661
AjuI GAANNNNNNNTTGG 4 cut(s) 297, 329, 1728, 1760
AluBI AGCT 7 cut(s) 281, 627, 1048, 1072, 1437, 1511, 2057
AluI AGCT 7 cut(s) 281, 627, 1048, 1072, 1437, 1511, 2057
Alw21I GWGCWC 1 cut(s) 2133
Alw26I GTCTC 2 cut(s) 62, 2081
Alw44I GTGCAC 1 cut(s) 2129
AlwI GGATC 4 cut(s) 629, 874, 1263, 1798
Aor13HI TCCGGA 2 cut(s) 957, 1847
Aor51HI AGCGCT 1 cut(s) 604
AoxI GGCC 6 cut(s) 522, 681, 1060, 1305, 1558, 1863
ApaLI GTGCAC 1 cut(s) 2129
ApeKI GCWGC 4 cut(s) 1165, 1260, 1437, 2048
ApoI RAATTY 5 cut(s) 329, 379, 801, 1178, 1990
ArsI GACNNNNNNTTYG 6 cut(s) 67, 99, 251, 283, 1361, 1393
AspLEI GCGC 3 cut(s) 605, 785, 1016
AspS9I GGNCC 8 cut(s) 508, 523, 989, 1060, 1172, 1429, 1864, 2108
AsuC2I CCSGG 3 cut(s) 192, 1253, 1867
AsuHPI GGTGA 4 cut(s) 772, 1645, 1996, 2008
AsuII TTCGAA 1 cut(s) 1296
AvaII GGWCC 5 cut(s) 508, 989, 1172, 1429, 2108
BaeGI GKGCMC 1 cut(s) 2133
BanI GGYRCC 1 cut(s) 1765
BbsI GAAGAC 4 cut(s) 261, 447, 915, 1848
Bbv12I GWGCWC 1 cut(s) 2133
BbvCI CCTCAGC 1 cut(s) 1056
BbvI GCAGC 4 cut(s) 1177, 1272, 1424, 2035
BceAI ACGGC 2 cut(s) 987, 1634
BcgI CGANNNNNNTGC 4 cut(s) 1457, 1491, 1711, 1745
BciT130I CCWGG 2 cut(s) 527, 663
BcnI CCSGG 3 cut(s) 192, 1253, 1867
BcoDI GTCTC 2 cut(s) 62, 2081
BfaI CTAG 3 cut(s) 1398, 1502, 2173
BfmI CTRYAG 1 cut(s) 1365
BfoI RGCGCY 1 cut(s) 606
BfuAI ACCTGC 2 cut(s) 802, 1484
BglII AGATCT 1 cut(s) 1835
BisI GCNGC 4 cut(s) 1166, 1261, 1438, 2049
BlsI GCNGC 4 cut(s) 1167, 1262, 1439, 2050
Bme1390I CCNGG 5 cut(s) 192, 527, 663, 1253, 1867
Bme18I GGWCC 5 cut(s) 508, 989, 1172, 1429, 2108
BmgBI CACGTC 1 cut(s) 388
BmgT120I GGNCC 8 cut(s) 508, 523, 989, 1060, 1172, 1429, 1864, 2108
BmiI GGNNCC 6 cut(s) 422, 510, 990, 1430, 1767, 1909
BmrFI CCNGG 5 cut(s) 192, 527, 663, 1253, 1867
BmrI ACTGGG 1 cut(s) 1553
BmsI GCATC 8 cut(s) 40, 411, 865, 1191, 1315, 1727, 1837, 2081
BmuI ACTGGG 1 cut(s) 1553
BpiI GAAGAC 4 cut(s) 261, 447, 915, 1848
BpmI CTGGAG 4 cut(s) 548, 645, 1935, 2137
Bpu10I CCTNAGC 3 cut(s) 1056, 1433, 1479
Bpu14I TTCGAA 1 cut(s) 1296
BpuEI CTTGAG 2 cut(s) 382, 1061
BpuMI CCSGG 3 cut(s) 192, 1253, 1867
Bsa29I ATCGAT 1 cut(s) 1721
BsaHI GRCGYC 1 cut(s) 1647
BsaI GGTCTC 1 cut(s) 2081
BsaJI CCNNGG 5 cut(s) 241, 504, 525, 1467, 2143
BsaWI WCCGGW 5 cut(s) 90, 957, 991, 1642, 1847
Bsc4I CCNNNNNNNGG 5 cut(s) 370, 668, 885, 1603, 1945
Bse1I ACTGG 2 cut(s) 1548, 1918
Bse3DI GCAATG 5 cut(s) 739, 978, 1135, 1713, 1756
BseAI TCCGGA 2 cut(s) 957, 1847
BseBI CCWGG 2 cut(s) 527, 663
BseCI ATCGAT 1 cut(s) 1721
BseDI CCNNGG 5 cut(s) 241, 504, 525, 1467, 2143
BseGI GGATG 8 cut(s) 17, 836, 954, 1206, 1330, 1593, 1828, 2096
BseLI CCNNNNNNNGG 5 cut(s) 370, 668, 885, 1603, 1945
BseMI GCAATG 5 cut(s) 739, 978, 1135, 1713, 1756
BseMII CTCAG 4 cut(s) 1047, 1257, 1424, 2049
BseNI ACTGG 2 cut(s) 1548, 1918
BseRI GAGGAG 3 cut(s) 592, 1024, 1484
BseSI GKGCMC 1 cut(s) 2133
BseXI GCAGC 4 cut(s) 1177, 1272, 1424, 2035
BseYI CCCAGC 1 cut(s) 1425
BsgI GTGCAG 1 cut(s) 43
Bsh1236I CGCG 1 cut(s) 785
BshFI GGCC 6 cut(s) 524, 683, 1062, 1307, 1560, 1865
BshNI GGYRCC 1 cut(s) 1765
BshVI ATCGAT 1 cut(s) 1721
BsiHKAI GWGCWC 1 cut(s) 2133
BsiSI CCGG 9 cut(s) 91, 192, 684, 958, 992, 1252, 1643, 1848, 1867
BslFI GGGAC 7 cut(s) 965, 1002, 1150, 1429, 1442, 1679, 1991
BslI CCNNNNNNNGG 5 cut(s) 370, 668, 885, 1603, 1945
BsmAI GTCTC 2 cut(s) 62, 2081
BsmBI CGTCTC 1 cut(s) 62
BsmFI GGGAC 7 cut(s) 965, 1002, 1150, 1429, 1442, 1679, 1991
BsnI GGCC 6 cut(s) 524, 683, 1062, 1307, 1560, 1865
Bso31I GGTCTC 1 cut(s) 2081
Bsp119I TTCGAA 1 cut(s) 1296
Bsp1286I GDGCHC 1 cut(s) 2133
Bsp13I TCCGGA 2 cut(s) 957, 1847
Bsp143I GATC 7 cut(s) 28, 621, 866, 1255, 1790, 1835, 1955
BspACI CCGC 6 cut(s) 53, 97, 141, 785, 1301, 2152
BspANI GGCC 6 cut(s) 524, 683, 1062, 1307, 1560, 1865
BspCNI CTCAG 4 cut(s) 1048, 1258, 1425, 2050
BspDI ATCGAT 1 cut(s) 1721
BspEI TCCGGA 2 cut(s) 957, 1847
BspFNI CGCG 1 cut(s) 785
BspHI TCATGA 1 cut(s) 85
BspLI GGNNCC 6 cut(s) 422, 510, 990, 1430, 1767, 1909
BspMAI CTGCAG 1 cut(s) 1369
BspMI ACCTGC 2 cut(s) 802, 1484
BspPI GGATC 4 cut(s) 629, 874, 1263, 1798
BspT104I TTCGAA 1 cut(s) 1296
BspT107I GGYRCC 1 cut(s) 1765
BspTNI GGTCTC 1 cut(s) 2081
BsrDI GCAATG 5 cut(s) 739, 978, 1135, 1713, 1756
BsrI ACTGG 2 cut(s) 1548, 1918
BssECI CCNNGG 5 cut(s) 241, 504, 525, 1467, 2143
BssMI GATC 7 cut(s) 28, 621, 866, 1255, 1790, 1835, 1955
BssNI GRCGYC 1 cut(s) 1647
Bst2UI CCWGG 2 cut(s) 527, 663
Bst4CI ACNGT 7 cut(s) 64, 215, 760, 1376, 1785, 2020, 2135
Bst6I CTCTTC 2 cut(s) 11, 1352
BstACI GRCGYC 1 cut(s) 1647
BstBI TTCGAA 1 cut(s) 1296
BstC8I GCNNGC 4 cut(s) 238, 880, 1476, 1700
BstDEI CTNAG 5 cut(s) 1056, 1266, 1433, 1479, 2058
BstF5I GGATG 8 cut(s) 17, 836, 954, 1206, 1330, 1593, 1828, 2096
BstFNI CGCG 1 cut(s) 785
BstH2I RGCGCY 1 cut(s) 606
BstHHI GCGC 3 cut(s) 605, 785, 1016
BstKTI GATC 7 cut(s) 31, 624, 869, 1258, 1793, 1838, 1958
BstMAI GTCTC 2 cut(s) 62, 2081
BstMBI GATC 7 cut(s) 28, 621, 866, 1255, 1790, 1835, 1955
BstMWI GCNNNNNNNGC 6 cut(s) 459, 638, 791, 1916, 2054, 2128
BstNI CCWGG 2 cut(s) 527, 663
BstNSI RCATGY 2 cut(s) 240, 742
BstSCI CCNGG 5 cut(s) 190, 525, 661, 1251, 1865
BstSFI CTRYAG 1 cut(s) 1365
BstSLI GKGCMC 1 cut(s) 2133
BstUI CGCG 1 cut(s) 785
BstV1I GCAGC 4 cut(s) 1177, 1272, 1424, 2035
BstV2I GAAGAC 4 cut(s) 261, 447, 915, 1848
BstX2I RGATCY 1 cut(s) 1835
BstXI CCANNNNNNTGG 2 cut(s) 904, 1240
BstYI RGATCY 1 cut(s) 1835
Bsu15I ATCGAT 1 cut(s) 1721
BsuRI GGCC 6 cut(s) 524, 683, 1062, 1307, 1560, 1865
BsuTUI ATCGAT 1 cut(s) 1721
BtrI CACGTC 1 cut(s) 388
BtsCI GGATG 8 cut(s) 17, 836, 954, 1206, 1330, 1593, 1828, 2096
BtsIMutI CAGTG 4 cut(s) 60, 1263, 1911, 2140
BveI ACCTGC 2 cut(s) 802, 1484
Cac8I GCNNGC 4 cut(s) 238, 880, 1476, 1700
CciI TCATGA 1 cut(s) 85
CfoI GCGC 3 cut(s) 605, 785, 1016
Cfr13I GGNCC 8 cut(s) 508, 523, 989, 1060, 1172, 1429, 1864, 2108
ClaI ATCGAT 1 cut(s) 1721
CseI GACGC 2 cut(s) 79, 1655
Csp6I GTAC 2 cut(s) 339, 1777
CviQI GTAC 2 cut(s) 339, 1777
DdeI CTNAG 5 cut(s) 1056, 1266, 1433, 1479, 2058
DpnI GATC 7 cut(s) 30, 623, 868, 1257, 1792, 1837, 1957
DpnII GATC 7 cut(s) 28, 621, 866, 1255, 1790, 1835, 1955
EaeI YGGCCR 3 cut(s) 681, 1305, 1558
Eam1104I CTCTTC 2 cut(s) 11, 1352
EarI CTCTTC 2 cut(s) 11, 1352
Eco31I GGTCTC 1 cut(s) 2081
Eco47I GGWCC 5 cut(s) 508, 989, 1172, 1429, 2108
Eco47III AGCGCT 1 cut(s) 604
Eco57I CTGAAG 4 cut(s) 689, 1070, 1333, 1860
EcoO109I RGGNCCY 3 cut(s) 508, 1060, 1429
EcoRII CCWGG 2 cut(s) 525, 661
EcoT22I ATGCAT 1 cut(s) 1330
Esp3I CGTCTC 1 cut(s) 62
FaqI GGGAC 7 cut(s) 965, 1002, 1150, 1429, 1442, 1679, 1991
Fnu4HI GCNGC 4 cut(s) 1166, 1261, 1438, 2049
FokI GGATG 8 cut(s) 24, 843, 941, 1213, 1337, 1580, 1815, 2103
Fsp4HI GCNGC 4 cut(s) 1166, 1261, 1438, 2049
FspBI CTAG 3 cut(s) 1398, 1502, 2173
GlaI GCGC 3 cut(s) 604, 784, 1015
GluI GCNGC 4 cut(s) 1166, 1261, 1438, 2049
GsaI CCCAGC 1 cut(s) 1429
GsuI CTGGAG 4 cut(s) 548, 645, 1935, 2137
HaeII RGCGCY 1 cut(s) 606
HaeIII GGCC 6 cut(s) 524, 683, 1062, 1307, 1560, 1865
HapII CCGG 9 cut(s) 91, 192, 684, 958, 992, 1252, 1643, 1848, 1867
HgaI GACGC 2 cut(s) 79, 1655
HhaI GCGC 3 cut(s) 605, 785, 1016
Hin1I GRCGYC 1 cut(s) 1647
Hin6I GCGC 3 cut(s) 603, 783, 1014
HinP1I GCGC 3 cut(s) 603, 783, 1014
HincII GTYRAC 2 cut(s) 1461, 2140
HindII GTYRAC 2 cut(s) 1461, 2140
HpaII CCGG 9 cut(s) 91, 192, 684, 958, 992, 1252, 1643, 1848, 1867
HphI GGTGA 4 cut(s) 772, 1645, 1996, 2008
Hpy166II GTNNAC 6 cut(s) 1283, 1461, 1636, 2010, 2131, 2140
Hpy188I TCNGA 8 cut(s) 211, 558, 598, 919, 1081, 1189, 1318, 1840
Hpy8I GTNNAC 6 cut(s) 1283, 1461, 1636, 2010, 2131, 2140
HpyCH4III ACNGT 7 cut(s) 64, 215, 760, 1376, 1785, 2020, 2135
HpyCH4IV ACGT 3 cut(s) 387, 723, 1025
HpyF10VI GCNNNNNNNGC 6 cut(s) 459, 638, 791, 1916, 2054, 2128
HpyF3I CTNAG 5 cut(s) 1056, 1266, 1433, 1479, 2058
HpySE526I ACGT 3 cut(s) 387, 723, 1025
Hsp92I GRCGYC 1 cut(s) 1647
HspAI GCGC 3 cut(s) 603, 783, 1014
Kpn2I TCCGGA 2 cut(s) 957, 1847
Kzo9I GATC 7 cut(s) 28, 621, 866, 1255, 1790, 1835, 1955
LmnI GCTCC 5 cut(s) 1011, 1383, 1471, 1907, 1916
Lsp1109I GCAGC 4 cut(s) 1177, 1272, 1424, 2035
LweI GCATC 8 cut(s) 40, 411, 865, 1191, 1315, 1727, 1837, 2081
MaeI CTAG 3 cut(s) 1398, 1502, 2173
MaeII ACGT 3 cut(s) 387, 723, 1025
MaeIII GTNAC 4 cut(s) 220, 318, 853, 1984
MalI GATC 7 cut(s) 30, 623, 868, 1257, 1792, 1837, 1957
MboI GATC 7 cut(s) 28, 621, 866, 1255, 1790, 1835, 1955
MfeI CAATTG 1 cut(s) 983
MflI RGATCY 1 cut(s) 1835
MhlI GDGCHC 1 cut(s) 2133
MluCI AATT 8 cut(s) 329, 379, 801, 983, 1017, 1178, 1221, 1990
MlyI GAGTC 7 cut(s) 131, 602, 851, 1193, 1823, 1838, 2022
MmeI TCCRAC 1 cut(s) 2086
Mph1103I ATGCAT 1 cut(s) 1330
MroI TCCGGA 2 cut(s) 957, 1847
MseI TTAA 1 cut(s) 945
MslI CAYNNNNRTG 3 cut(s) 1088, 1094, 1723
MspA1I CMGCKG 2 cut(s) 143, 281
MspI CCGG 9 cut(s) 91, 192, 684, 958, 992, 1252, 1643, 1848, 1867
MspR9I CCNGG 5 cut(s) 192, 527, 663, 1253, 1867
MunI CAATTG 1 cut(s) 983
MvaI CCWGG 2 cut(s) 527, 663
MvnI CGCG 1 cut(s) 785
MwoI GCNNNNNNNGC 6 cut(s) 459, 638, 791, 1916, 2054, 2128
NciI CCSGG 3 cut(s) 192, 1253, 1867
NdeII GATC 7 cut(s) 28, 621, 866, 1255, 1790, 1835, 1955
NlaIV GGNNCC 6 cut(s) 422, 510, 990, 1430, 1767, 1909
NmeAIII GCCGAG 4 cut(s) 266, 1333, 1492, 2124
NmuCI GTSAC 3 cut(s) 318, 853, 1984
NsiI ATGCAT 1 cut(s) 1330
NspI RCATGY 2 cut(s) 240, 742
NspV TTCGAA 1 cut(s) 1296
PaeI GCATGC 1 cut(s) 240
PagI TCATGA 1 cut(s) 85
PaqCI CACCTGC 1 cut(s) 802
PfeI GAWTC 7 cut(s) 132, 206, 349, 553, 961, 1409, 1682
PflMI CCANNNNNTGG 1 cut(s) 370
PkrI GCNGC 4 cut(s) 1167, 1262, 1439, 2050
PleI GAGTC 7 cut(s) 131, 601, 850, 1192, 1822, 1838, 2022
PpsI GAGTC 7 cut(s) 131, 601, 850, 1192, 1822, 1838, 2022
PpuMI RGGWCCY 2 cut(s) 508, 1429
Psp5II RGGWCCY 2 cut(s) 508, 1429
Psp6I CCWGG 2 cut(s) 525, 661
PspFI CCCAGC 1 cut(s) 1425
PspGI CCWGG 2 cut(s) 525, 661
PspN4I GGNNCC 6 cut(s) 422, 510, 990, 1430, 1767, 1909
PspPI GGNCC 8 cut(s) 508, 523, 989, 1060, 1172, 1429, 1864, 2108
PspPPI RGGWCCY 2 cut(s) 508, 1429
PstI CTGCAG 1 cut(s) 1369
PsuI RGATCY 1 cut(s) 1835
PvuII CAGCTG 1 cut(s) 281
RsaI GTAC 2 cut(s) 340, 1778
RsaNI GTAC 2 cut(s) 339, 1777
RseI CAYNNNNRTG 3 cut(s) 1088, 1094, 1723
SaqAI TTAA 1 cut(s) 945
SatI GCNGC 4 cut(s) 1166, 1261, 1438, 2049
Sau3AI GATC 7 cut(s) 28, 621, 866, 1255, 1790, 1835, 1955
Sau96I GGNCC 8 cut(s) 508, 523, 989, 1060, 1172, 1429, 1864, 2108
SchI GAGTC 7 cut(s) 131, 602, 851, 1193, 1823, 1838, 2022
ScrFI CCNGG 5 cut(s) 192, 527, 663, 1253, 1867
SduI GDGCHC 1 cut(s) 2133
SfaNI GCATC 8 cut(s) 40, 411, 865, 1191, 1315, 1727, 1837, 2081
SfcI CTRYAG 1 cut(s) 1365
SfuI TTCGAA 1 cut(s) 1296
SinI GGWCC 5 cut(s) 508, 989, 1172, 1429, 2108
SmiMI CAYNNNNRTG 3 cut(s) 1088, 1094, 1723
SmlI CTYRAG 2 cut(s) 397, 1040
SmoI CTYRAG 2 cut(s) 397, 1040
SphI GCATGC 1 cut(s) 240
Sse9I AATT 8 cut(s) 329, 379, 801, 983, 1017, 1178, 1221, 1990
SsiI CCGC 6 cut(s) 53, 97, 141, 785, 1301, 2152
SspI AATATT 1 cut(s) 1854
SspMI CTAG 3 cut(s) 1398, 1502, 2173
StyD4I CCNGG 5 cut(s) 190, 525, 661, 1251, 1865
TaaI ACNGT 7 cut(s) 64, 215, 760, 1376, 1785, 2020, 2135
TaiI ACGT 3 cut(s) 390, 726, 1028
TaqI TCGA 7 cut(s) 37, 135, 1296, 1404, 1523, 1721, 2162
TaqII GACCGA 1 cut(s) 968
TasI AATT 8 cut(s) 329, 379, 801, 983, 1017, 1178, 1221, 1990
TatI WGTACW 1 cut(s) 338
TfiI GAWTC 7 cut(s) 132, 206, 349, 553, 961, 1409, 1682
Tru1I TTAA 1 cut(s) 945
Tru9I TTAA 1 cut(s) 945
TscAI CASTG 4 cut(s) 67, 1270, 1918, 2140
TseFI GTSAC 3 cut(s) 318, 853, 1984
TseI GCWGC 4 cut(s) 1165, 1260, 1437, 2048
Tsp45I GTSAC 3 cut(s) 318, 853, 1984
TspDTI ATGAA 5 cut(s) 342, 401, 453, 1767, 1874
TspGWI ACGGA 1 cut(s) 2023
TspRI CASTG 4 cut(s) 67, 1270, 1918, 2140
Van91I CCANNNNNTGG 1 cut(s) 370
VneI GTGCAC 1 cut(s) 2129
VpaK11BI GGWCC 5 cut(s) 508, 989, 1172, 1429, 2108
XapI RAATTY 5 cut(s) 329, 379, 801, 1178, 1990
XceI RCATGY 2 cut(s) 240, 742
XcmI CCANNNNNNNNNTGG 1 cut(s) 2059
XspI CTAG 3 cut(s) 1398, 1502, 2173
Zsp2I ATGCAT 1 cut(s) 1330
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.