RLG00000005655

protein desumoylation

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Forward (+)
618851 .. 625680
6830 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005655

Sequence Viewer

Length: 1710 bp
ATGGAAGAGGGATGGAAGAGAAATCATGATCTTTCCGGAAGCAGAAATGATGCGCTCTGCGCTGTTGAGACGCAAACAGGAGGTCATGACCGGAAGCGGAAGAACGAAAACCATAATGTAGAAAAGAAGGGAACCAACTCCGCTGTTGTATTATCAAGTGGGTCAGGCATTGATGATTGTATGACATTACCCGGTGGTAAGGAAGAATCAGACAGTCAGTTAGTTGCAACAATAGAAATGGGGTTTGGGTCACTTTATGAATTTCGCTGTACGAAAGTGAATCTCCCACTTTGCCAAGTGCTGGTTGAAAATTTTGACGTGGCGAACTCAAGCATCAACATTCATGGAAGGAACCTGACAATCACACATGAAGACTTTGAACGCATAATGGGCGTTAGGAATGGAGGTTGTGATGTGGAGGTTGAAGGAAACACCGAGGACCCTGATATATTGGCCCTGGAGAGGAAGATTTCGGGGAAGGAGAATCAGATAACAATACATGGATTGAGGAGGGTGCTGATTGAGTCTGAAAGCGCTGATGAAATATTTAGGATCAGCTTTGCCTTGTATGCCCTTGCAACCTTGCTATCTCCAGTAACAGGAATCCATGTCGAACGAAGATATCTTATTCCACTTAAGGATCCAAATGGCCTATGTTCAAAAAACTGGGCAAAGTTTGCATTTGATAAGCTCGTTGAAGGGGTGTCATTGTTTCAGGGCACGGGGATTGGATTGGCCGGAGGTTGTATTCTGTTCCTTCAGTTGTTCTATCTGGACGTTGTTAGCAATGGCATGTTTGTTTTGCTGAAGACAGTGAAACCTGTTATGATATGGGGCGCGGACGAGGCAAAGAAAATTTATGAGCAGGTGGAGAGCATGGGGGGATGGAAAAGTGAGTCTGTTTATGTGACAAAGAGGTATTTGTGGGACAGAACAATTCAGTATAGTGGATCGGTTGATGCCAGCACAGGGATAAAAACCAATGTCGTGGAAGACTTGTCAGAAGTGATGTCTGATGTGGGTGTCGTTAAAGGGGACATCCGGAATCTAAAGTCAATGGTCGGTCAATTGGGACCGGATATGTGCCGTTTGAGGAGCGCAATTATGACGTTAGAAACATCTCTTGAGAAGCTGAAGGCTGAGGGCCTCTGTCAGCTTGTTTCAGACACTATCATGGGAGTGTTTGAGGATAAGCAGAATGATTATGTGGGCAATGATGGGACTGATGTTTTTGTTGATGGTCAAAAGCAGCATGGTCCAGAATTTGAGTCAGATGACGATGGGATGCCTAATGCTAAATCCAAAATTGTCATTTCCAATGAGGTGGTAGCATACCGGGATCGCAGCACTGAGGTTGAGAGAAATGAACAGACGAGGTTCGAAGCGGTGGCCGAGATCTCAGAGAGGGATGCATACTTATTGGCATATCTCTTCAGCAAGAAGGTTTCTGCAGACAACAGTTTTGGGAGCAACGAAGTTGCTAGGTTCGAGGATTCAGGTGTATCTCGCTGGGATCTGAGCTGCTTGTCCCCAACGCAGTCGTTGACTGCCGAGGTTGTCAACATATCAGCTGCGTACTTGTGCCAGAGCGGATCTGAGAACTGGTTCTTGCCAGCTACAGTGTCGGAGCGTGCTAAGGAGATTTCGGCAGGCTTTGTACGAGTTTTTAAAAAATTTGAATCCTATAAGACAAGATTCATTCCTTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

570

Amino Acids

63.01

Weight (kDa)

5.02

Isoelectric Point (pI)

35.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 856
Acc36I ACCTGC 1 cut(s) 856
AccB7I CCANNNNNTGG 1 cut(s) 301
AccBSI CCGCTC 1 cut(s) 1590
AccII CGCG 1 cut(s) 839
AccIII TCCGGA 2 cut(s) 35, 1041
AciI CCGC 5 cut(s) 97, 141, 839, 1385, 1590
AclWI GGATC 7 cut(s) 560, 635, 648, 958, 1347, 1521, 1600
AcoI YGGCCR 2 cut(s) 735, 1389
AcsI RAATTY 5 cut(s) 260, 310, 855, 1262, 1673
AcuI CTGAAG 4 cut(s) 743, 827, 1154, 1417
AfaI GTAC 3 cut(s) 271, 1577, 1659
AfeI AGCGCT 1 cut(s) 535
AfiI CCNNNNNNNGG 4 cut(s) 301, 462, 599, 969
AflII CTTAAG 1 cut(s) 635
AgsI TTSAA 6 cut(s) 308, 380, 425, 660, 698, 1679
AjiI CACGTC 1 cut(s) 319
AjnI CCWGG 1 cut(s) 456
AjuI GAANNNNNNNTTGG 2 cut(s) 228, 260
AluBI AGCT 7 cut(s) 558, 691, 1132, 1156, 1521, 1571, 1616
AluI AGCT 7 cut(s) 558, 691, 1132, 1156, 1521, 1571, 1616
Alw26I GTCTC 1 cut(s) 62
AlwI GGATC 7 cut(s) 560, 635, 648, 958, 1347, 1521, 1600
Aor13HI TCCGGA 2 cut(s) 35, 1041
Aor51HI AGCGCT 1 cut(s) 535
AoxI GGCC 5 cut(s) 453, 649, 735, 1144, 1389
ApeKI GCWGC 4 cut(s) 1249, 1344, 1521, 1571
ApoI RAATTY 5 cut(s) 260, 310, 855, 1262, 1673
ArsI GACNNNNNNTTYG 4 cut(s) 67, 99, 1445, 1477
Asp700I GAANNNNTTC 1 cut(s) 1604
AspLEI GCGC 5 cut(s) 55, 62, 536, 839, 1100
AspS9I GGNCC 5 cut(s) 439, 454, 1073, 1144, 1256
AsuC2I CCSGG 2 cut(s) 192, 1337
AsuII TTCGAA 1 cut(s) 1380
AvaII GGWCC 3 cut(s) 439, 1073, 1256
BaeGI GKGCMC 1 cut(s) 722
BamHI GGATCC 1 cut(s) 640
BbsI GAAGAC 3 cut(s) 378, 815, 999
BbvCI CCTCAGC 1 cut(s) 1140
BbvI GCAGC 4 cut(s) 1261, 1356, 1508, 1558
BccI CCATC 5 cut(s) 6, 879, 1211, 1232, 1274
BceAI ACGGC 1 cut(s) 1071
BciT130I CCWGG 1 cut(s) 458
BcnI CCSGG 2 cut(s) 192, 1337
BcoDI GTCTC 1 cut(s) 62
BfaI CTAG 1 cut(s) 1482
BfmI CTRYAG 2 cut(s) 1449, 1617
BfoI RGCGCY 1 cut(s) 537
BfrI CTTAAG 1 cut(s) 635
BfuAI ACCTGC 1 cut(s) 856
BglII AGATCT 1 cut(s) 1395
BisI GCNGC 4 cut(s) 1250, 1345, 1522, 1572
BlsI GCNGC 4 cut(s) 1251, 1346, 1523, 1573
Bme1390I CCNGG 3 cut(s) 192, 458, 1337
Bme18I GGWCC 3 cut(s) 439, 1073, 1256
BmgBI CACGTC 1 cut(s) 319
BmgT120I GGNCC 5 cut(s) 439, 454, 1073, 1144, 1256
BmiI GGNNCC 5 cut(s) 133, 353, 441, 642, 1074
BmrFI CCNGG 3 cut(s) 192, 458, 1337
BmrI ACTGGG 1 cut(s) 676
BmsI GCATC 5 cut(s) 40, 342, 949, 1275, 1399
BmuI ACTGGG 1 cut(s) 676
BpiI GAAGAC 3 cut(s) 378, 815, 999
BpmI CTGGAG 2 cut(s) 479, 576
Bpu10I CCTNAGC 2 cut(s) 1140, 1635
Bpu14I TTCGAA 1 cut(s) 1380
BpuEI CTTGAG 2 cut(s) 313, 1145
BpuMI CCSGG 2 cut(s) 192, 1337
BsaJI CCNNGG 3 cut(s) 435, 456, 1551
BsaWI WCCGGW 4 cut(s) 35, 90, 1041, 1075
Bsc4I CCNNNNNNNGG 4 cut(s) 301, 462, 599, 969
Bse1I ACTGG 3 cut(s) 593, 671, 1607
Bse3DI GCAATG 2 cut(s) 793, 1219
BseAI TCCGGA 2 cut(s) 35, 1041
BseBI CCWGG 1 cut(s) 458
BseDI CCNNGG 3 cut(s) 435, 456, 1551
BseGI GGATG 5 cut(s) 17, 890, 1038, 1290, 1414
BseLI CCNNNNNNNGG 4 cut(s) 301, 462, 599, 969
BseMI GCAATG 2 cut(s) 793, 1219
BseMII CTCAG 5 cut(s) 1131, 1341, 1413, 1508, 1587
BseNI ACTGG 3 cut(s) 593, 671, 1607
BseRI GAGGAG 2 cut(s) 523, 1108
BseSI GKGCMC 1 cut(s) 722
BseXI GCAGC 4 cut(s) 1261, 1356, 1508, 1558
BseYI CCCAGC 1 cut(s) 1509
Bsh1236I CGCG 1 cut(s) 839
BshFI GGCC 5 cut(s) 455, 651, 737, 1146, 1391
BsiSI CCGG 7 cut(s) 36, 91, 192, 738, 1042, 1076, 1336
BslFI GGGAC 5 cut(s) 941, 1049, 1086, 1234, 1513
BslI CCNNNNNNNGG 4 cut(s) 301, 462, 599, 969
BsmAI GTCTC 1 cut(s) 62
BsmBI CGTCTC 1 cut(s) 62
BsmFI GGGAC 5 cut(s) 941, 1049, 1086, 1234, 1513
BsnI GGCC 5 cut(s) 455, 651, 737, 1146, 1391
Bsp119I TTCGAA 1 cut(s) 1380
Bsp1286I GDGCHC 1 cut(s) 722
Bsp13I TCCGGA 2 cut(s) 35, 1041
Bsp143I GATC 8 cut(s) 28, 552, 640, 950, 1339, 1395, 1513, 1592
BspACI CCGC 5 cut(s) 97, 141, 839, 1385, 1590
BspANI GGCC 5 cut(s) 455, 651, 737, 1146, 1391
BspCNI CTCAG 5 cut(s) 1132, 1342, 1412, 1509, 1588
BspEI TCCGGA 2 cut(s) 35, 1041
BspFNI CGCG 1 cut(s) 839
BspHI TCATGA 2 cut(s) 25, 85
BspLI GGNNCC 5 cut(s) 133, 353, 441, 642, 1074
BspMAI CTGCAG 1 cut(s) 1453
BspMI ACCTGC 1 cut(s) 856
BspPI GGATC 7 cut(s) 560, 635, 648, 958, 1347, 1521, 1600
BspT104I TTCGAA 1 cut(s) 1380
BspTI CTTAAG 1 cut(s) 635
BsrBI CCGCTC 1 cut(s) 1590
BsrDI GCAATG 2 cut(s) 793, 1219
BsrI ACTGG 3 cut(s) 593, 671, 1607
BssECI CCNNGG 3 cut(s) 435, 456, 1551
BssMI GATC 8 cut(s) 28, 552, 640, 950, 1339, 1395, 1513, 1592
Bst2UI CCWGG 1 cut(s) 458
Bst4CI ACNGT 4 cut(s) 215, 814, 1460, 1621
Bst6I CTCTTC 2 cut(s) 11, 1436
BstAFI CTTAAG 1 cut(s) 635
BstAPI GCANNNNNTGC 1 cut(s) 677
BstBI TTCGAA 1 cut(s) 1380
BstC8I GCNNGC 4 cut(s) 964, 1614, 1632, 1651
BstDEI CTNAG 6 cut(s) 1140, 1350, 1399, 1517, 1596, 1635
BstF5I GGATG 5 cut(s) 17, 890, 1038, 1290, 1414
BstFNI CGCG 1 cut(s) 839
BstH2I RGCGCY 1 cut(s) 537
BstHHI GCGC 5 cut(s) 55, 62, 536, 839, 1100
BstKTI GATC 8 cut(s) 31, 555, 643, 953, 1342, 1398, 1516, 1595
BstMAI GTCTC 1 cut(s) 62
BstMBI GATC 8 cut(s) 28, 552, 640, 950, 1339, 1395, 1513, 1592
BstMWI GCNNNNNNNGC 5 cut(s) 59, 390, 569, 677, 845
BstNI CCWGG 1 cut(s) 458
BstNSI RCATGY 1 cut(s) 796
BstSCI CCNGG 3 cut(s) 190, 456, 1335
BstSFI CTRYAG 2 cut(s) 1449, 1617
BstSLI GKGCMC 1 cut(s) 722
BstUI CGCG 1 cut(s) 839
BstV1I GCAGC 4 cut(s) 1261, 1356, 1508, 1558
BstV2I GAAGAC 3 cut(s) 378, 815, 999
BstX2I RGATCY 4 cut(s) 640, 1395, 1513, 1592
BstXI CCANNNNNNTGG 2 cut(s) 988, 1324
BstYI RGATCY 4 cut(s) 640, 1395, 1513, 1592
BsuRI GGCC 5 cut(s) 455, 651, 737, 1146, 1391
BtrI CACGTC 1 cut(s) 319
BtsCI GGATG 5 cut(s) 17, 890, 1038, 1290, 1414
BtsIMutI CAGTG 3 cut(s) 819, 1347, 1626
BveI ACCTGC 1 cut(s) 856
Cac8I GCNNGC 4 cut(s) 964, 1614, 1632, 1651
CciI TCATGA 2 cut(s) 25, 85
CfoI GCGC 5 cut(s) 55, 62, 536, 839, 1100
Cfr13I GGNCC 5 cut(s) 439, 454, 1073, 1144, 1256
CseI GACGC 1 cut(s) 79
Csp6I GTAC 3 cut(s) 270, 1576, 1658
CviQI GTAC 3 cut(s) 270, 1576, 1658
DdeI CTNAG 6 cut(s) 1140, 1350, 1399, 1517, 1596, 1635
DpnI GATC 8 cut(s) 30, 554, 642, 952, 1341, 1397, 1515, 1594
DpnII GATC 8 cut(s) 28, 552, 640, 950, 1339, 1395, 1513, 1592
DraI TTTAAA 1 cut(s) 1669
EaeI YGGCCR 2 cut(s) 735, 1389
Eam1104I CTCTTC 2 cut(s) 11, 1436
EarI CTCTTC 2 cut(s) 11, 1436
Eco32I GATATC 1 cut(s) 623
Eco47I GGWCC 3 cut(s) 439, 1073, 1256
Eco47III AGCGCT 1 cut(s) 535
Eco57I CTGAAG 4 cut(s) 743, 827, 1154, 1417
EcoO109I RGGNCCY 2 cut(s) 439, 1144
EcoRII CCWGG 1 cut(s) 456
EcoRV GATATC 1 cut(s) 623
EcoT22I ATGCAT 1 cut(s) 1414
Esp3I CGTCTC 1 cut(s) 62
FaqI GGGAC 5 cut(s) 941, 1049, 1086, 1234, 1513
Fnu4HI GCNGC 4 cut(s) 1250, 1345, 1522, 1572
FokI GGATG 5 cut(s) 24, 897, 1025, 1297, 1421
Fsp4HI GCNGC 4 cut(s) 1250, 1345, 1522, 1572
FspBI CTAG 1 cut(s) 1482
GlaI GCGC 5 cut(s) 54, 61, 535, 838, 1099
GluI GCNGC 4 cut(s) 1250, 1345, 1522, 1572
GsaI CCCAGC 1 cut(s) 1513
GsuI CTGGAG 2 cut(s) 479, 576
HaeII RGCGCY 1 cut(s) 537
HaeIII GGCC 5 cut(s) 455, 651, 737, 1146, 1391
HapII CCGG 7 cut(s) 36, 91, 192, 738, 1042, 1076, 1336
HgaI GACGC 1 cut(s) 79
HhaI GCGC 5 cut(s) 55, 62, 536, 839, 1100
Hin6I GCGC 5 cut(s) 53, 60, 534, 837, 1098
HinP1I GCGC 5 cut(s) 53, 60, 534, 837, 1098
HincII GTYRAC 2 cut(s) 1545, 1561
HindII GTYRAC 2 cut(s) 1545, 1561
HpaII CCGG 7 cut(s) 36, 91, 192, 738, 1042, 1076, 1336
Hpy166II GTNNAC 2 cut(s) 1545, 1561
Hpy188III TCNNGA 7 cut(s) 26, 36, 86, 773, 1042, 1124, 1259
Hpy8I GTNNAC 2 cut(s) 1545, 1561
HpyAV CCTTC 8 cut(s) 121, 342, 419, 472, 692, 767, 1129, 1435
HpyCH4III ACNGT 4 cut(s) 215, 814, 1460, 1621
HpyCH4IV ACGT 3 cut(s) 318, 777, 1109
HpyCH4V TGCA 5 cut(s) 227, 578, 680, 1412, 1451
HpyF10VI GCNNNNNNNGC 5 cut(s) 59, 390, 569, 677, 845
HpyF3I CTNAG 6 cut(s) 1140, 1350, 1399, 1517, 1596, 1635
HpySE526I ACGT 3 cut(s) 318, 777, 1109
HspAI GCGC 5 cut(s) 53, 60, 534, 837, 1098
Kpn2I TCCGGA 2 cut(s) 35, 1041
Kzo9I GATC 8 cut(s) 28, 552, 640, 950, 1339, 1395, 1513, 1592
LmnI GCTCC 3 cut(s) 1095, 1467, 1627
Lsp1109I GCAGC 4 cut(s) 1261, 1356, 1508, 1558
LweI GCATC 5 cut(s) 40, 342, 949, 1275, 1399
MaeI CTAG 1 cut(s) 1482
MaeII ACGT 3 cut(s) 318, 777, 1109
MaeIII GTNAC 3 cut(s) 249, 595, 907
MalI GATC 8 cut(s) 30, 554, 642, 952, 1341, 1397, 1515, 1594
MbiI CCGCTC 1 cut(s) 1590
MboI GATC 8 cut(s) 28, 552, 640, 950, 1339, 1395, 1513, 1592
MfeI CAATTG 1 cut(s) 1067
MflI RGATCY 4 cut(s) 640, 1395, 1513, 1592
MhlI GDGCHC 1 cut(s) 722
MluCI AATT 9 cut(s) 260, 310, 855, 936, 1067, 1101, 1262, 1305, 1673
MlyI GAGTC 3 cut(s) 533, 905, 1277
MmeI TCCRAC 1 cut(s) 1605
Mph1103I ATGCAT 1 cut(s) 1414
MroI TCCGGA 2 cut(s) 35, 1041
MroXI GAANNNNTTC 1 cut(s) 1604
MseI TTAA 3 cut(s) 636, 1029, 1668
MslI CAYNNNNRTG 2 cut(s) 1172, 1178
MspA1I CMGCKG 2 cut(s) 143, 1571
MspCI CTTAAG 1 cut(s) 635
MspI CCGG 7 cut(s) 36, 91, 192, 738, 1042, 1076, 1336
MspR9I CCNGG 3 cut(s) 192, 458, 1337
MunI CAATTG 1 cut(s) 1067
MvaI CCWGG 1 cut(s) 458
MvnI CGCG 1 cut(s) 839
MwoI GCNNNNNNNGC 5 cut(s) 59, 390, 569, 677, 845
NciI CCSGG 2 cut(s) 192, 1337
NdeII GATC 8 cut(s) 28, 552, 640, 950, 1339, 1395, 1513, 1592
NlaIV GGNNCC 5 cut(s) 133, 353, 441, 642, 1074
NmeAIII GCCGAG 2 cut(s) 1417, 1576
NmuCI GTSAC 2 cut(s) 249, 907
NsiI ATGCAT 1 cut(s) 1414
NspI RCATGY 1 cut(s) 796
NspV TTCGAA 1 cut(s) 1380
PagI TCATGA 2 cut(s) 25, 85
PaqCI CACCTGC 1 cut(s) 856
PdmI GAANNNNTTC 1 cut(s) 1604
PfeI GAWTC 8 cut(s) 206, 280, 484, 603, 1045, 1493, 1679, 1695
PflMI CCANNNNNTGG 1 cut(s) 301
PkrI GCNGC 4 cut(s) 1251, 1346, 1523, 1573
PleI GAGTC 3 cut(s) 532, 904, 1276
PpsI GAGTC 3 cut(s) 532, 904, 1276
PpuMI RGGWCCY 1 cut(s) 439
Psp5II RGGWCCY 1 cut(s) 439
Psp6I CCWGG 1 cut(s) 456
PspFI CCCAGC 1 cut(s) 1509
PspGI CCWGG 1 cut(s) 456
PspN4I GGNNCC 5 cut(s) 133, 353, 441, 642, 1074
PspPI GGNCC 5 cut(s) 439, 454, 1073, 1144, 1256
PspPPI RGGWCCY 1 cut(s) 439
PstI CTGCAG 1 cut(s) 1453
PsuI RGATCY 4 cut(s) 640, 1395, 1513, 1592
PvuII CAGCTG 1 cut(s) 1571
RsaI GTAC 3 cut(s) 271, 1577, 1659
RsaNI GTAC 3 cut(s) 270, 1576, 1658
RseI CAYNNNNRTG 2 cut(s) 1172, 1178
SaqAI TTAA 3 cut(s) 636, 1029, 1668
SatI GCNGC 4 cut(s) 1250, 1345, 1522, 1572
Sau3AI GATC 8 cut(s) 28, 552, 640, 950, 1339, 1395, 1513, 1592
Sau96I GGNCC 5 cut(s) 439, 454, 1073, 1144, 1256
SchI GAGTC 3 cut(s) 533, 905, 1277
ScrFI CCNGG 3 cut(s) 192, 458, 1337
SduI GDGCHC 1 cut(s) 722
SfaNI GCATC 5 cut(s) 40, 342, 949, 1275, 1399
SfcI CTRYAG 2 cut(s) 1449, 1617
SfuI TTCGAA 1 cut(s) 1380
SinI GGWCC 3 cut(s) 439, 1073, 1256
SmiMI CAYNNNNRTG 2 cut(s) 1172, 1178
SmlI CTYRAG 3 cut(s) 328, 635, 1124
SmoI CTYRAG 3 cut(s) 328, 635, 1124
Sse9I AATT 9 cut(s) 260, 310, 855, 936, 1067, 1101, 1262, 1305, 1673
SsiI CCGC 5 cut(s) 97, 141, 839, 1385, 1590
SspI AATATT 1 cut(s) 546
SspMI CTAG 1 cut(s) 1482
StyD4I CCNGG 3 cut(s) 190, 456, 1335
TaaI ACNGT 4 cut(s) 215, 814, 1460, 1621
TaiI ACGT 3 cut(s) 321, 780, 1112
TaqI TCGA 3 cut(s) 612, 1380, 1488
TaqII GACCGA 1 cut(s) 1052
TasI AATT 9 cut(s) 260, 310, 855, 936, 1067, 1101, 1262, 1305, 1673
TfiI GAWTC 8 cut(s) 206, 280, 484, 603, 1045, 1493, 1679, 1695
Tru1I TTAA 3 cut(s) 636, 1029, 1668
Tru9I TTAA 3 cut(s) 636, 1029, 1668
TscAI CASTG 3 cut(s) 819, 1354, 1626
TseFI GTSAC 2 cut(s) 249, 907
TseI GCWGC 4 cut(s) 1249, 1344, 1521, 1571
Tsp45I GTSAC 2 cut(s) 249, 907
TspDTI ATGAA 7 cut(s) 273, 332, 384, 555, 1380, 1687, 1695
TspRI CASTG 3 cut(s) 819, 1354, 1626
Van91I CCANNNNNTGG 1 cut(s) 301
Vha464I CTTAAG 1 cut(s) 635
VpaK11BI GGWCC 3 cut(s) 439, 1073, 1256
XapI RAATTY 5 cut(s) 260, 310, 855, 1262, 1673
XceI RCATGY 1 cut(s) 796
XmnI GAANNNNTTC 1 cut(s) 1604
XspI CTAG 1 cut(s) 1482
Zsp2I ATGCAT 1 cut(s) 1414
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.