Rw2G016610

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000030
Physical Location & Seq
Forward (+)
19968629 .. 19971029
2401 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G016610.1

Sequence Viewer

Length: 1008 bp
ATGGCTGACGTGGCCTTAACAGATTTGGAAGTTAGAACTTGTTTACACATTATGATCGGGTGTGAATTATCTGGGAAACGTAGAAGGTTGGTGGCTGAAATCGTGCAACGACCCCTTAATGAAGTGCTTGAGGAGAAGGGTGATCCCTCACATTGCGTTGCAGAAGGTGGTGAACTACTGTCTTCAATAGTGTTAAAAACAGGCTGTAATCCAAAGGATTTCAAACAAACCTGTGCTCAGTTATCAATAGGAAAGACGAATGCAGTAGATGGAATTGGATTTGGGCCATTAACGAAGATAGGGTGCACCAAAATGAACTGGGAGATATGCCAAATGTTGGTTGACAACTTTGAGGTGGAAAAGGAAGGCTGCTGTATCAAAATTCAGGGGAGATCTTTGTCAATTCGGGATAGTGACTTTAAGCGCGTGATGGGGGTGAGGAACGGAGGATCAGCTGTAGAACTAGATGGATGGTCGGAGGTCCTTAAGATAAATGAGCTAACAAGTAAGATATTTGGTGAGAACAGAGAGATTAGTATTGTTACTTTGAAGAAGAACATACTAGAGAGGGATGAAGTTGATGATATCCTCAAAATAAGCTTTGTCCTATATACTCTTGCCATCCTGTTATGCCCGACGAAGCCTGGCTGTGTTGAGAGGAAGTTTCTTATTCCAGTTTGTGATGCTGCAGCAATCGGTACAAAGAATTGGGCAAGTCTCCATTCGTACAGAATGGAAACAGGAAATGGAAATGAGTTTGGAAGCGACGATGATGGGAGTGTAATTGGTATTGATACCGAACCGTGGCAGAAACTTCCACTGTCCCCATATTATGACGGAGGATCATGGTACGAAGGAGCATACGATGAAGCAGCAGAAGAGGGTGATACGTATGTGGAGGACACGGGTGCGAAAGTTGGACTGAAACCAGGTCCTGTCTCCACAGATGATGGTAATGTTCGAAAGGAGAGGAAGATAGGTTCCCATTCAAGGGAAATCTTTCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

335

Amino Acids

36.84

Weight (kDa)

5.03

Isoelectric Point (pI)

23.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 337
AccII CGCG 1 cut(s) 426
AclWI GGATC 3 cut(s) 137, 457, 850
AcsI RAATTY 1 cut(s) 381
AfaI GTAC 3 cut(s) 700, 728, 851
AfiI CCNNNNNNNGG 4 cut(s) 337, 804, 990, 991
AflII CTTAAG 1 cut(s) 485
AgsI TTSAA 4 cut(s) 186, 223, 550, 990
AjiI CACGTC 1 cut(s) 10
AjnI CCWGG 2 cut(s) 643, 928
AloI GAACNNNNNNTCC 2 cut(s) 964, 996
AluBI AGCT 3 cut(s) 455, 499, 600
AluI AGCT 3 cut(s) 455, 499, 600
Alw21I GWGCWC 2 cut(s) 238, 308
Alw26I GTCTC 2 cut(s) 722, 943
Alw44I GTGCAC 1 cut(s) 304
AlwI GGATC 3 cut(s) 137, 457, 850
AlwNI CAGNNNCTG 1 cut(s) 935
AoxI GGCC 2 cut(s) 12, 284
ApaLI GTGCAC 1 cut(s) 304
ApeKI GCWGC 4 cut(s) 369, 686, 689, 872
ApoI RAATTY 1 cut(s) 381
Asp700I GAANNNNTTC 1 cut(s) 999
AspLEI GCGC 1 cut(s) 426
AspS9I GGNCC 3 cut(s) 284, 481, 932
AsuHPI GGTGA 5 cut(s) 152, 182, 448, 530, 896
AsuII TTCGAA 1 cut(s) 961
AvaII GGWCC 2 cut(s) 481, 932
BaeGI GKGCMC 1 cut(s) 308
BaeI ACNNNNGTAYC 2 cut(s) 879, 912
BbsI GAAGAC 1 cut(s) 174
Bbv12I GWGCWC 2 cut(s) 238, 308
BbvI GCAGC 4 cut(s) 356, 673, 701, 884
BccI CCATC 7 cut(s) 263, 424, 461, 465, 629, 767, 944
BciT130I CCWGG 2 cut(s) 645, 930
BcoDI GTCTC 2 cut(s) 722, 943
BfaI CTAG 2 cut(s) 464, 563
BfmI CTRYAG 2 cut(s) 456, 687
BfrI CTTAAG 1 cut(s) 485
BglII AGATCT 1 cut(s) 392
BisI GCNGC 4 cut(s) 370, 687, 690, 873
BlsI GCNGC 4 cut(s) 371, 688, 691, 874
Bme1390I CCNGG 2 cut(s) 645, 930
Bme18I GGWCC 2 cut(s) 481, 932
BmgBI CACGTC 1 cut(s) 10
BmgT120I GGNCC 3 cut(s) 284, 481, 932
BmiI GGNNCC 1 cut(s) 982
BmrFI CCNGG 2 cut(s) 645, 930
BmrI ACTGGG 1 cut(s) 328
BmsI GCATC 1 cut(s) 673
BmuI ACTGGG 1 cut(s) 328
BpiI GAAGAC 1 cut(s) 174
Bpu14I TTCGAA 1 cut(s) 961
BpuEI CTTGAG 1 cut(s) 149
BsaAI YACGTR 1 cut(s) 891
BsaJI CCNNGG 1 cut(s) 803
Bsc4I CCNNNNNNNGG 4 cut(s) 337, 804, 990, 991
Bse1I ACTGG 2 cut(s) 323, 674
Bse3DI GCAATG 1 cut(s) 151
BseBI CCWGG 2 cut(s) 645, 930
BseDI CCNNGG 1 cut(s) 803
BseGI GGATG 3 cut(s) 476, 577, 621
BseLI CCNNNNNNNGG 4 cut(s) 337, 804, 990, 991
BseMI GCAATG 1 cut(s) 151
BseMII CTCAG 1 cut(s) 251
BseNI ACTGG 2 cut(s) 323, 674
BseRI GAGGAG 1 cut(s) 146
BseSI GKGCMC 1 cut(s) 308
BseXI GCAGC 4 cut(s) 356, 673, 701, 884
Bsh1236I CGCG 1 cut(s) 426
BshFI GGCC 2 cut(s) 14, 286
BsiHKAI GWGCWC 2 cut(s) 238, 308
BslFI GGGAC 1 cut(s) 808
BslI CCNNNNNNNGG 4 cut(s) 337, 804, 990, 991
BsmAI GTCTC 2 cut(s) 722, 943
BsmFI GGGAC 1 cut(s) 808
BsmI GAATGC 1 cut(s) 265
BsnI GGCC 2 cut(s) 14, 286
Bsp119I TTCGAA 1 cut(s) 961
Bsp1286I GDGCHC 2 cut(s) 238, 308
Bsp143I GATC 5 cut(s) 54, 142, 392, 449, 842
BspANI GGCC 2 cut(s) 14, 286
BspCNI CTCAG 1 cut(s) 250
BspFNI CGCG 1 cut(s) 426
BspLI GGNNCC 1 cut(s) 982
BspMAI CTGCAG 1 cut(s) 691
BspPI GGATC 3 cut(s) 137, 457, 850
BspT104I TTCGAA 1 cut(s) 961
BspTI CTTAAG 1 cut(s) 485
BsrDI GCAATG 1 cut(s) 151
BsrI ACTGG 2 cut(s) 323, 674
BssECI CCNNGG 1 cut(s) 803
BssMI GATC 5 cut(s) 54, 142, 392, 449, 842
Bst2UI CCWGG 2 cut(s) 645, 930
Bst4CI ACNGT 3 cut(s) 180, 804, 822
Bst6I CTCTTC 1 cut(s) 873
BstAFI CTTAAG 1 cut(s) 485
BstBAI YACGTR 1 cut(s) 891
BstBI TTCGAA 1 cut(s) 961
BstDEI CTNAG 1 cut(s) 237
BstDSI CCRYGG 1 cut(s) 803
BstF5I GGATG 3 cut(s) 476, 577, 621
BstFNI CGCG 1 cut(s) 426
BstHHI GCGC 1 cut(s) 426
BstKTI GATC 5 cut(s) 57, 145, 395, 452, 845
BstMAI GTCTC 2 cut(s) 722, 943
BstMBI GATC 5 cut(s) 54, 142, 392, 449, 842
BstMWI GCNNNNNNNGC 1 cut(s) 11
BstNI CCWGG 2 cut(s) 645, 930
BstSCI CCNGG 2 cut(s) 643, 928
BstSFI CTRYAG 2 cut(s) 456, 687
BstSLI GKGCMC 1 cut(s) 308
BstSNI TACGTA 1 cut(s) 891
BstUI CGCG 1 cut(s) 426
BstV1I GCAGC 4 cut(s) 356, 673, 701, 884
BstV2I GAAGAC 1 cut(s) 174
BstX2I RGATCY 1 cut(s) 392
BstYI RGATCY 1 cut(s) 392
BsuRI GGCC 2 cut(s) 14, 286
BtgI CCRYGG 1 cut(s) 803
BtrI CACGTC 1 cut(s) 10
BtsCI GGATG 3 cut(s) 476, 577, 621
BtsIMutI CAGTG 2 cut(s) 818, 1003
CaiI CAGNNNCTG 1 cut(s) 935
CfoI GCGC 1 cut(s) 426
Cfr13I GGNCC 3 cut(s) 284, 481, 932
CsiI ACCWGGT 1 cut(s) 928
Csp6I GTAC 3 cut(s) 699, 727, 850
CviAII CATG 1 cut(s) 846
CviQI GTAC 3 cut(s) 699, 727, 850
DdeI CTNAG 1 cut(s) 237
DpnI GATC 5 cut(s) 56, 144, 394, 451, 844
DpnII GATC 5 cut(s) 54, 142, 392, 449, 842
Eam1104I CTCTTC 1 cut(s) 873
EarI CTCTTC 1 cut(s) 873
Eco105I TACGTA 1 cut(s) 891
Eco32I GATATC 1 cut(s) 586
Eco47I GGWCC 2 cut(s) 481, 932
EcoO109I RGGNCCY 2 cut(s) 481, 932
EcoRII CCWGG 2 cut(s) 643, 928
EcoRV GATATC 1 cut(s) 586
FaeI CATG 1 cut(s) 849
FaqI GGGAC 1 cut(s) 808
FatI CATG 1 cut(s) 845
Fnu4HI GCNGC 4 cut(s) 370, 687, 690, 873
FokI GGATG 3 cut(s) 483, 584, 608
Fsp4HI GCNGC 4 cut(s) 370, 687, 690, 873
FspBI CTAG 2 cut(s) 464, 563
GlaI GCGC 1 cut(s) 425
GluI GCNGC 4 cut(s) 370, 687, 690, 873
HaeIII GGCC 2 cut(s) 14, 286
HhaI GCGC 1 cut(s) 426
Hin1II CATG 1 cut(s) 849
Hin6I GCGC 1 cut(s) 424
HinP1I GCGC 1 cut(s) 424
HincII GTYRAC 1 cut(s) 343
HindII GTYRAC 1 cut(s) 343
HindIII AAGCTT 1 cut(s) 598
HphI GGTGA 5 cut(s) 152, 182, 448, 530, 896
Hpy166II GTNNAC 4 cut(s) 44, 173, 306, 343
Hpy188I TCNGA 1 cut(s) 478
Hpy188III TCNNGA 1 cut(s) 407
Hpy8I GTNNAC 4 cut(s) 44, 173, 306, 343
Hpy99I CGWCG 2 cut(s) 640, 770
HpyAV CCTTC 5 cut(s) 78, 130, 158, 359, 848
HpyCH4III ACNGT 3 cut(s) 180, 804, 822
HpyCH4IV ACGT 3 cut(s) 9, 79, 890
HpyCH4V TGCA 5 cut(s) 106, 161, 263, 306, 689
HpyF10VI GCNNNNNNNGC 1 cut(s) 11
HpyF3I CTNAG 1 cut(s) 237
HpySE526I ACGT 3 cut(s) 9, 79, 890
Hsp92II CATG 1 cut(s) 849
HspAI GCGC 1 cut(s) 424
Kzo9I GATC 5 cut(s) 54, 142, 392, 449, 842
LmnI GCTCC 1 cut(s) 857
Lsp1109I GCAGC 4 cut(s) 356, 673, 701, 884
LweI GCATC 1 cut(s) 673
MabI ACCWGGT 1 cut(s) 928
MaeI CTAG 2 cut(s) 464, 563
MaeII ACGT 3 cut(s) 9, 79, 890
MaeIII GTNAC 2 cut(s) 413, 541
MalI GATC 5 cut(s) 56, 144, 394, 451, 844
MboI GATC 5 cut(s) 54, 142, 392, 449, 842
MboII GAAGA 6 cut(s) 174, 307, 562, 565, 890, 985
MflI RGATCY 1 cut(s) 392
MhlI GDGCHC 2 cut(s) 238, 308
MluCI AATT 6 cut(s) 65, 273, 381, 402, 706, 783
MmeI TCCRAC 2 cut(s) 456, 898
MroXI GAANNNNTTC 1 cut(s) 999
MseI TTAA 6 cut(s) 17, 117, 194, 290, 420, 486
MslI CAYNNNNRTG 1 cut(s) 311
MspA1I CMGCKG 1 cut(s) 455
MspCI CTTAAG 1 cut(s) 485
MspR9I CCNGG 2 cut(s) 645, 930
Mva1269I GAATGC 1 cut(s) 265
MvaI CCWGG 2 cut(s) 645, 930
MvnI CGCG 1 cut(s) 426
MwoI GCNNNNNNNGC 1 cut(s) 11
NdeII GATC 5 cut(s) 54, 142, 392, 449, 842
NlaIII CATG 1 cut(s) 849
NlaIV GGNNCC 1 cut(s) 982
NmuCI GTSAC 1 cut(s) 413
NspV TTCGAA 1 cut(s) 961
PctI GAATGC 1 cut(s) 265
PdmI GAANNNNTTC 1 cut(s) 999
PflMI CCANNNNNTGG 1 cut(s) 337
PkrI GCNGC 4 cut(s) 371, 688, 691, 874
Ppu21I YACGTR 1 cut(s) 891
PpuMI RGGWCCY 2 cut(s) 481, 932
Psp5II RGGWCCY 2 cut(s) 481, 932
Psp6I CCWGG 2 cut(s) 643, 928
PspGI CCWGG 2 cut(s) 643, 928
PspN4I GGNNCC 1 cut(s) 982
PspPI GGNCC 3 cut(s) 284, 481, 932
PspPPI RGGWCCY 2 cut(s) 481, 932
PstI CTGCAG 1 cut(s) 691
PstNI CAGNNNCTG 1 cut(s) 935
PsuI RGATCY 1 cut(s) 392
PvuII CAGCTG 1 cut(s) 455
RsaI GTAC 3 cut(s) 700, 728, 851
RsaNI GTAC 3 cut(s) 699, 727, 850
RseI CAYNNNNRTG 1 cut(s) 311
SaqAI TTAA 6 cut(s) 17, 117, 194, 290, 420, 486
SatI GCNGC 4 cut(s) 370, 687, 690, 873
Sau3AI GATC 5 cut(s) 54, 142, 392, 449, 842
Sau96I GGNCC 3 cut(s) 284, 481, 932
ScrFI CCNGG 2 cut(s) 645, 930
SduI GDGCHC 2 cut(s) 238, 308
SexAI ACCWGGT 1 cut(s) 928
SfaNI GCATC 1 cut(s) 673
SfcI CTRYAG 2 cut(s) 456, 687
SfuI TTCGAA 1 cut(s) 961
SinI GGWCC 2 cut(s) 481, 932
SmiMI CAYNNNNRTG 1 cut(s) 311
SmlI CTYRAG 2 cut(s) 128, 485
SmoI CTYRAG 2 cut(s) 128, 485
SnaBI TACGTA 1 cut(s) 891
Sse9I AATT 6 cut(s) 65, 273, 381, 402, 706, 783
SspMI CTAG 2 cut(s) 464, 563
StyD4I CCNGG 2 cut(s) 643, 928
TaaI ACNGT 3 cut(s) 180, 804, 822
TaiI ACGT 3 cut(s) 12, 82, 893
TaqI TCGA 1 cut(s) 961
TasI AATT 6 cut(s) 65, 273, 381, 402, 706, 783
Tru1I TTAA 6 cut(s) 17, 117, 194, 290, 420, 486
Tru9I TTAA 6 cut(s) 17, 117, 194, 290, 420, 486
TscAI CASTG 1 cut(s) 825
TseFI GTSAC 1 cut(s) 413
TseI GCWGC 4 cut(s) 369, 686, 689, 872
Tsp45I GTSAC 1 cut(s) 413
TspDTI ATGAA 4 cut(s) 135, 329, 588, 882
TspGWI ACGGA 2 cut(s) 459, 852
TspRI CASTG 1 cut(s) 825
Van91I CCANNNNNTGG 1 cut(s) 337
Vha464I CTTAAG 1 cut(s) 485
VneI GTGCAC 1 cut(s) 304
VpaK11BI GGWCC 2 cut(s) 481, 932
XapI RAATTY 1 cut(s) 381
XmnI GAANNNNTTC 1 cut(s) 999
XspI CTAG 2 cut(s) 464, 563
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.