Rh6AG175300

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0000030
Physical Location & Seq
Forward (+)
28496166 .. 28499589
3424 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG175300.1

Sequence Viewer

Length: 1629 bp
ATGTCTTCCCTGTCAGATGAAAAGGTAGCTGCGACATATGAAATTGGGTTTGGGTCACTGCACCGATTTCGTTGTGGCAAAGTGAACCTCCCACTGTGCCAAATGCTGGTTGAAAATTTTGATGTTGGGAACTCATGCATCAAGATACACGGAAGGAACCTGACAATCACACATGAAGACTTTTGGCGCATTATGGGCGTCATGGATGGAGGGTGCGATGTGAATCTTGAAGGAAGCACCGAGGACCCTGATATACTGGGGCTGAAGAGCAAGCTTTCAAGGAAGAAGAAGGAGATAACCATACATGGTCTGAGGAGGTTGTTGATTGAATCTGAAAGTACCGACGACACTTTTAAGTTTGCATTCGCCAAGCTTGTTGAAGGGGTGTCATCATTCCGGGCGACGCGGACTGGTTTGGCAGGAGGTTGTATTCTGTTCCTTCAATTGTTCTACCTGGACGTTGTTGGCAATAATATCTATACATATCCAAAGATTGGGAAACCAGTGATGACGTGGAGCAAAGATGACTTGAAGAGAGTTTATGAAAAAGTGGAGAGCGAGGGCGGATTTAAAAGCCAGAATGTGCGTGTAACGAAGAAGTATTTAAGGGGAAATGTACTTTCAGGGACTGGATCAGTTGATCCCAGCACAGGGATTAAGACAACTGTAGTAGACGATTTATCAGAAGTGAGGTCTGATGTTGGTGTTGTGAAAGGGGATATAGAGAGTTTGAAGTTAACGGTTGGTCGGTTGGAACCAGACATGGGTCGATTGAGGAGAGCAATTCTGACACTAGAATCCACGGTTGGGGAACTTAAGGCCAACGGTCTCGGCGGCATTGTTGCTGAAGCAATCAAGCAAGTGTTTGAAGACAAGTCCTACACTTACGGTGGTAATTTTGGGAATGATGGTCTTTTTATCAATGAAGAGCACCAAGGCACAGAAGCTGAGCAACATAACGATGAGATGCCTCATAATAAATCTATCATTATAAGTGTCATGTCCACTGACAAGGATGCATATGGATGCGACAGCAGTGACATGGAAGAAGATGAGGCAGGGAGTTTCCCGGCGGTGTCTGAGATATCGCACAGCGACTCATACCTACTGACCTATCTATTCAGCAAGAAGGTTACCGCCGATGACAGTGTTGGGAGCAATGAAGTTGCTAGGCACGAGGAATGGTCTGTTTCTCGATGGGACATGAGGAGCTTGTCCCCAATGCAATGTCTGACCTGTGAGATTGTTGACATATCGGCTGCTTACTTGTTTGATCGGGGATCGGACAACTGGTTCATGCCAACTTCATTCTCAGTGGAAGGTCTCGTGCCATCTACCGTTAAACTGTGCCGACTGGGAAGATTAATTGGTCGATTTATGTCGTGCAAAAAGATTTTCTTTCCTATCCATGACGGCATACTTAAGCATTGGTTCTTGGCTATTCTTAAAATACCCAGTTGGCAATGCGAAATATGGGACAGCAACCCCGAGAAGTCAGCAAACAAACGTCGGGAGGAATATGTTGCTGCATCTGAACCCTACCTTACATATATTGTTAACATGTGTGGGGAGAAGCAGATTGTTCACACCCTAATAACACCAGCATCTAGTTATGAATGCACTGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

542

Amino Acids

60.41

Weight (kDa)

5.47

Isoelectric Point (pI)

40.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 992
AccB7I CCANNNNNTGG 2 cut(s) 106, 494
AccI GTMKAC 1 cut(s) 672
AccII CGCG 1 cut(s) 406
AciI CCGC 5 cut(s) 406, 564, 834, 1073, 1137
AclWI GGATC 3 cut(s) 635, 640, 1288
AcsI RAATTY 1 cut(s) 115
AcuI CTGAAG 2 cut(s) 284, 867
AcyI GRCGYC 1 cut(s) 198
AfaI GTAC 2 cut(s) 340, 618
AfiI CCNNNNNNNGG 6 cut(s) 106, 494, 650, 651, 764, 807
AflII CTTAAG 2 cut(s) 815, 1421
AflIII ACRYGT 1 cut(s) 1560
AgsI TTSAA 9 cut(s) 113, 230, 279, 329, 380, 443, 532, 733, 869
AjiI CACGTC 1 cut(s) 513
AjnI CCWGG 1 cut(s) 453
AjuI GAANNNNNNNTTGG 4 cut(s) 33, 65, 789, 821
AloI GAACNNNNNNTCC 2 cut(s) 1277, 1309
AluBI AGCT 5 cut(s) 29, 274, 373, 947, 1212
AluI AGCT 5 cut(s) 29, 274, 373, 947, 1212
Alw21I GWGCWC 1 cut(s) 933
Alw26I GTCTC 2 cut(s) 833, 1328
AlwI GGATC 3 cut(s) 635, 640, 1288
AlwNI CAGNNNCTG 2 cut(s) 629, 947
Ama87I CYCGRG 1 cut(s) 1487
AoxI GGCC 1 cut(s) 819
ApeKI GCWGC 3 cut(s) 29, 1259, 1526
ApoI RAATTY 1 cut(s) 115
AseI ATTAAT 1 cut(s) 1364
AspLEI GCGC 1 cut(s) 189
AspS9I GGNCC 1 cut(s) 244
AsuC2I CCSGG 2 cut(s) 398, 1070
AvaI CYCGRG 1 cut(s) 1487
AvaII GGWCC 1 cut(s) 244
BauI CACGAG 2 cut(s) 1175, 1325
BbsI GAAGAC 2 cut(s) 183, 876
Bbv12I GWGCWC 1 cut(s) 933
BbvI GCAGC 3 cut(s) 16, 1246, 1513
BccI CCATC 4 cut(s) 200, 902, 1191, 1339
BceAI ACGGC 1 cut(s) 1429
BcgI CGANNNNNNTGC 2 cut(s) 50, 84
BciT130I CCWGG 1 cut(s) 455
BcnI CCSGG 2 cut(s) 398, 1070
BcoDI GTCTC 2 cut(s) 833, 1328
BfaI CTAG 3 cut(s) 794, 1170, 1608
BfmI CTRYAG 1 cut(s) 666
BfrI CTTAAG 2 cut(s) 815, 1421
BisI GCNGC 4 cut(s) 30, 835, 1260, 1527
BlpI GCTNAGC 1 cut(s) 948
BlsI GCNGC 4 cut(s) 31, 836, 1261, 1528
Bme1390I CCNGG 3 cut(s) 398, 455, 1070
Bme18I GGWCC 1 cut(s) 244
BmeT110I CYCGRG 1 cut(s) 1487
BmgBI CACGTC 1 cut(s) 513
BmgT120I GGNCC 1 cut(s) 244
BmiI GGNNCC 3 cut(s) 158, 246, 756
BmrFI CCNGG 3 cut(s) 398, 455, 1070
BmrI ACTGGG 3 cut(s) 266, 1364, 1449
BmsI GCATC 6 cut(s) 147, 957, 1006, 1016, 1538, 1613
BmuI ACTGGG 3 cut(s) 266, 1364, 1449
BoxI GACNNNNGTC 1 cut(s) 765
BpiI GAAGAC 2 cut(s) 183, 876
Bpu1102I GCTNAGC 1 cut(s) 948
BpuMI CCSGG 2 cut(s) 398, 1070
BsaBI GATNNNNATC 1 cut(s) 222
BsaHI GRCGYC 1 cut(s) 198
BsaI GGTCTC 2 cut(s) 833, 1328
BsaJI CCNNGG 3 cut(s) 240, 801, 934
Bsc4I CCNNNNNNNGG 6 cut(s) 106, 494, 650, 651, 764, 807
Bse1I ACTGG 7 cut(s) 261, 415, 503, 634, 1295, 1359, 1455
Bse3DI GCAATG 3 cut(s) 1165, 1232, 1469
Bse8I GATNNNNATC 1 cut(s) 222
BseBI CCWGG 1 cut(s) 455
BseDI CCNNGG 3 cut(s) 240, 801, 934
BseGI GGATG 3 cut(s) 211, 1021, 1031
BseJI GATNNNNATC 1 cut(s) 222
BseLI CCNNNNNNNGG 6 cut(s) 106, 494, 650, 651, 764, 807
BseMI GCAATG 3 cut(s) 1165, 1232, 1469
BseMII CTCAG 4 cut(s) 302, 939, 1071, 1326
BseNI ACTGG 7 cut(s) 261, 415, 503, 634, 1295, 1359, 1455
BseRI GAGGAG 3 cut(s) 328, 790, 1222
BseXI GCAGC 3 cut(s) 16, 1246, 1513
BseYI CCCAGC 1 cut(s) 644
BsgI GTGCAG 1 cut(s) 44
Bsh1236I CGCG 1 cut(s) 406
BshFI GGCC 1 cut(s) 821
BsiHKAI GWGCWC 1 cut(s) 933
BsiHKCI CYCGRG 1 cut(s) 1487
BsiSI CCGG 2 cut(s) 397, 1070
BslFI GGGAC 4 cut(s) 640, 1201, 1214, 1490
BslI CCNNNNNNNGG 6 cut(s) 106, 494, 650, 651, 764, 807
BsmAI GTCTC 2 cut(s) 833, 1328
BsmFI GGGAC 4 cut(s) 640, 1201, 1214, 1490
BsmI GAATGC 2 cut(s) 362, 1622
BsnI GGCC 1 cut(s) 821
Bso31I GGTCTC 2 cut(s) 833, 1328
BsoBI CYCGRG 1 cut(s) 1487
Bsp1286I GDGCHC 1 cut(s) 933
Bsp143I GATC 4 cut(s) 632, 640, 1273, 1280
Bsp1720I GCTNAGC 1 cut(s) 948
BspACI CCGC 5 cut(s) 406, 564, 834, 1073, 1137
BspANI GGCC 1 cut(s) 821
BspCNI CTCAG 4 cut(s) 303, 940, 1072, 1325
BspFNI CGCG 1 cut(s) 406
BspLI GGNNCC 3 cut(s) 158, 246, 756
BspPI GGATC 3 cut(s) 635, 640, 1288
BspQI GCTCTTC 2 cut(s) 260, 921
BspTI CTTAAG 2 cut(s) 815, 1421
BspTNI GGTCTC 2 cut(s) 833, 1328
BsrDI GCAATG 3 cut(s) 1165, 1232, 1469
BsrI ACTGG 7 cut(s) 261, 415, 503, 634, 1295, 1359, 1455
BssECI CCNNGG 3 cut(s) 240, 801, 934
BssMI GATC 4 cut(s) 632, 640, 1273, 1280
BssNI GRCGYC 1 cut(s) 198
BssSI CACGAG 2 cut(s) 1175, 1325
BssT1I CCWWGG 1 cut(s) 934
Bst2BI CACGAG 2 cut(s) 1175, 1325
Bst2UI CCWGG 1 cut(s) 455
Bst6I CTCTTC 3 cut(s) 260, 527, 921
BstACI GRCGYC 1 cut(s) 198
BstAFI CTTAAG 2 cut(s) 815, 1421
BstC8I GCNNGC 1 cut(s) 272
BstDEI CTNAG 4 cut(s) 311, 948, 1080, 1312
BstDSI CCRYGG 1 cut(s) 801
BstEII GGTNACC 1 cut(s) 1132
BstF5I GGATG 3 cut(s) 211, 1021, 1031
BstFNI CGCG 1 cut(s) 406
BstHHI GCGC 1 cut(s) 189
BstKTI GATC 4 cut(s) 635, 643, 1276, 1283
BstMAI GTCTC 2 cut(s) 833, 1328
BstMBI GATC 4 cut(s) 632, 640, 1273, 1280
BstMWI GCNNNNNNNGC 1 cut(s) 195
BstNI CCWGG 1 cut(s) 455
BstNSI RCATGY 1 cut(s) 1564
BstPAI GACNNNNGTC 1 cut(s) 765
BstPI GGTNACC 1 cut(s) 1132
BstSCI CCNGG 3 cut(s) 396, 453, 1068
BstSFI CTRYAG 1 cut(s) 666
BstUI CGCG 1 cut(s) 406
BstV1I GCAGC 3 cut(s) 16, 1246, 1513
BstV2I GAAGAC 2 cut(s) 183, 876
BsuRI GGCC 1 cut(s) 821
BtgI CCRYGG 1 cut(s) 801
BtgZI GCGATG 1 cut(s) 231
BtrI CACGTC 1 cut(s) 513
BtsCI GGATG 3 cut(s) 211, 1021, 1031
BtsI GCAGTG 2 cut(s) 56, 1042
BtsIMutI CAGTG 8 cut(s) 56, 92, 510, 1005, 1042, 1153, 1320, 1620
Cac8I GCNNGC 1 cut(s) 272
CaiI CAGNNNCTG 2 cut(s) 629, 947
CfoI GCGC 1 cut(s) 189
Cfr13I GGNCC 1 cut(s) 244
CseI GACGC 2 cut(s) 187, 412
Csp6I GTAC 2 cut(s) 339, 617
CviQI GTAC 2 cut(s) 339, 617
DdeI CTNAG 4 cut(s) 311, 948, 1080, 1312
DpnI GATC 4 cut(s) 634, 642, 1275, 1282
DpnII GATC 4 cut(s) 632, 640, 1273, 1280
DraI TTTAAA 1 cut(s) 571
Eam1104I CTCTTC 3 cut(s) 260, 527, 921
EarI CTCTTC 3 cut(s) 260, 527, 921
EciI GGCGGA 1 cut(s) 579
Eco130I CCWWGG 1 cut(s) 934
Eco31I GGTCTC 2 cut(s) 833, 1328
Eco32I GATATC 1 cut(s) 1086
Eco47I GGWCC 1 cut(s) 244
Eco57I CTGAAG 2 cut(s) 284, 867
Eco88I CYCGRG 1 cut(s) 1487
Eco91I GGTNACC 1 cut(s) 1132
EcoO109I RGGNCCY 1 cut(s) 244
EcoO65I GGTNACC 1 cut(s) 1132
EcoRII CCWGG 1 cut(s) 453
EcoRV GATATC 1 cut(s) 1086
EcoT14I CCWWGG 1 cut(s) 934
EcoT22I ATGCAT 2 cut(s) 140, 1021
ErhI CCWWGG 1 cut(s) 934
FalI AAGNNNNNCTT 2 cut(s) 1382, 1414
FaqI GGGAC 4 cut(s) 640, 1201, 1214, 1490
FauNDI CATATG 2 cut(s) 37, 1021
FblI GTMKAC 1 cut(s) 672
Fnu4HI GCNGC 4 cut(s) 30, 835, 1260, 1527
FokI GGATG 3 cut(s) 218, 1028, 1038
Fsp4HI GCNGC 4 cut(s) 30, 835, 1260, 1527
FspBI CTAG 3 cut(s) 794, 1170, 1608
GlaI GCGC 1 cut(s) 188
GluI GCNGC 4 cut(s) 30, 835, 1260, 1527
GsaI CCCAGC 1 cut(s) 648
HaeIII GGCC 1 cut(s) 821
HapII CCGG 2 cut(s) 397, 1070
HgaI GACGC 2 cut(s) 187, 412
HhaI GCGC 1 cut(s) 189
Hin1I GRCGYC 1 cut(s) 198
Hin6I GCGC 1 cut(s) 187
HinP1I GCGC 1 cut(s) 187
HincII GTYRAC 3 cut(s) 738, 1249, 1558
HindII GTYRAC 3 cut(s) 738, 1249, 1558
HindIII AAGCTT 2 cut(s) 272, 371
HinfI GANTC 4 cut(s) 223, 329, 797, 1097
HpaI GTTAAC 2 cut(s) 738, 1558
HpaII CCGG 2 cut(s) 397, 1070
Hpy166II GTNNAC 7 cut(s) 85, 673, 738, 1005, 1249, 1558, 1585
Hpy188III TCNNGA 4 cut(s) 142, 227, 1194, 1511
Hpy8I GTNNAC 7 cut(s) 85, 673, 738, 1005, 1249, 1558, 1585
Hpy99I CGWCG 3 cut(s) 347, 406, 1512
HpyAV CCTTC 7 cut(s) 147, 224, 283, 374, 449, 1123, 1313
HpyCH4IV ACGT 3 cut(s) 459, 512, 1507
HpyCH4V TGCA 8 cut(s) 61, 138, 362, 1019, 1225, 1386, 1529, 1620
HpyF10VI GCNNNNNNNGC 1 cut(s) 195
HpyF3I CTNAG 4 cut(s) 311, 948, 1080, 1312
HpySE526I ACGT 3 cut(s) 459, 512, 1507
Hsp92I GRCGYC 1 cut(s) 198
HspAI GCGC 1 cut(s) 187
KspAI GTTAAC 2 cut(s) 738, 1558
Kzo9I GATC 4 cut(s) 632, 640, 1273, 1280
LguI GCTCTTC 2 cut(s) 260, 921
LmnI GCTCC 3 cut(s) 516, 1155, 1209
Lsp1109I GCAGC 3 cut(s) 16, 1246, 1513
LweI GCATC 6 cut(s) 147, 957, 1006, 1016, 1538, 1613
MaeI CTAG 3 cut(s) 794, 1170, 1608
MaeII ACGT 3 cut(s) 459, 512, 1507
MaeIII GTNAC 4 cut(s) 54, 589, 1037, 1132
MalI GATC 4 cut(s) 634, 642, 1275, 1282
MboI GATC 4 cut(s) 632, 640, 1273, 1280
MfeI CAATTG 1 cut(s) 443
MhlI GDGCHC 1 cut(s) 933
MluCI AATT 6 cut(s) 42, 115, 443, 783, 895, 1365
MlyI GAGTC 1 cut(s) 1091
MmeI TCCRAC 1 cut(s) 732
Mph1103I ATGCAT 2 cut(s) 140, 1021
MslI CAYNNNNRTG 2 cut(s) 960, 1024
MspCI CTTAAG 2 cut(s) 815, 1421
MspI CCGG 2 cut(s) 397, 1070
MspR9I CCNGG 3 cut(s) 398, 455, 1070
MunI CAATTG 1 cut(s) 443
Mva1269I GAATGC 2 cut(s) 362, 1622
MvaI CCWGG 1 cut(s) 455
MvnI CGCG 1 cut(s) 406
MwoI GCNNNNNNNGC 1 cut(s) 195
NciI CCSGG 2 cut(s) 398, 1070
NdeI CATATG 2 cut(s) 37, 1021
NdeII GATC 4 cut(s) 632, 640, 1273, 1280
NlaIV GGNNCC 3 cut(s) 158, 246, 756
NmeAIII GCCGAG 1 cut(s) 810
NmuCI GTSAC 2 cut(s) 54, 1037
NsiI ATGCAT 2 cut(s) 140, 1021
NspI RCATGY 1 cut(s) 1564
PciI ACATGT 1 cut(s) 1560
PciSI GCTCTTC 2 cut(s) 260, 921
PctI GAATGC 2 cut(s) 362, 1622
PfeI GAWTC 3 cut(s) 223, 329, 797
PflMI CCANNNNNTGG 2 cut(s) 106, 494
PkrI GCNGC 4 cut(s) 31, 836, 1261, 1528
PleI GAGTC 1 cut(s) 1091
PpsI GAGTC 1 cut(s) 1091
PpuMI RGGWCCY 1 cut(s) 244
PscI ACATGT 1 cut(s) 1560
PshAI GACNNNNGTC 1 cut(s) 765
PshBI ATTAAT 1 cut(s) 1364
PsiI TTATAA 1 cut(s) 992
Psp5II RGGWCCY 1 cut(s) 244
Psp6I CCWGG 1 cut(s) 453
PspEI GGTNACC 1 cut(s) 1132
PspFI CCCAGC 1 cut(s) 644
PspGI CCWGG 1 cut(s) 453
PspN4I GGNNCC 3 cut(s) 158, 246, 756
PspPI GGNCC 1 cut(s) 244
PspPPI RGGWCCY 1 cut(s) 244
PstNI CAGNNNCTG 2 cut(s) 629, 947
RsaI GTAC 2 cut(s) 340, 618
RsaNI GTAC 2 cut(s) 339, 617
RseI CAYNNNNRTG 2 cut(s) 960, 1024
SapI GCTCTTC 2 cut(s) 260, 921
SatI GCNGC 4 cut(s) 30, 835, 1260, 1527
Sau3AI GATC 4 cut(s) 632, 640, 1273, 1280
Sau96I GGNCC 1 cut(s) 244
SchI GAGTC 1 cut(s) 1091
ScrFI CCNGG 3 cut(s) 398, 455, 1070
SduI GDGCHC 1 cut(s) 933
SfaNI GCATC 6 cut(s) 147, 957, 1006, 1016, 1538, 1613
SfcI CTRYAG 1 cut(s) 666
SinI GGWCC 1 cut(s) 244
SmiMI CAYNNNNRTG 2 cut(s) 960, 1024
SmlI CTYRAG 2 cut(s) 815, 1421
SmoI CTYRAG 2 cut(s) 815, 1421
Sse9I AATT 6 cut(s) 42, 115, 443, 783, 895, 1365
SsiI CCGC 5 cut(s) 406, 564, 834, 1073, 1137
SspMI CTAG 3 cut(s) 794, 1170, 1608
StyD4I CCNGG 3 cut(s) 396, 453, 1068
StyI CCWWGG 1 cut(s) 934
TaiI ACGT 3 cut(s) 462, 515, 1510
TaqI TCGA 3 cut(s) 769, 1195, 1372
TasI AATT 6 cut(s) 42, 115, 443, 783, 895, 1365
TatI WGTACW 1 cut(s) 616
TauI GCSGC 1 cut(s) 837
TfiI GAWTC 3 cut(s) 223, 329, 797
TscAI CASTG 8 cut(s) 63, 99, 510, 1012, 1042, 1153, 1320, 1627
TseFI GTSAC 2 cut(s) 54, 1037
TseI GCWGC 3 cut(s) 29, 1259, 1526
Tsp45I GTSAC 2 cut(s) 54, 1037
TspDTI ATGAA 9 cut(s) 33, 54, 189, 558, 939, 1176, 1285, 1296, 1629
TspGWI ACGGA 1 cut(s) 165
TspRI CASTG 8 cut(s) 63, 99, 510, 1012, 1042, 1153, 1320, 1627
Van91I CCANNNNNTGG 2 cut(s) 106, 494
Vha464I CTTAAG 2 cut(s) 815, 1421
VpaK11BI GGWCC 1 cut(s) 244
VspI ATTAAT 1 cut(s) 1364
XapI RAATTY 1 cut(s) 115
XceI RCATGY 1 cut(s) 1564
XcmI CCANNNNNNNNNTGG 1 cut(s) 510
XmiI GTMKAC 1 cut(s) 672
XspI CTAG 3 cut(s) 794, 1170, 1608
Zsp2I ATGCAT 2 cut(s) 140, 1021
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.