FvH4_c19g00020

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
contig_19
OG0000030
Physical Location & Seq
Forward (+)
2192 .. 4230
2039 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_c19g00020.t1

Sequence Viewer

Length: 1176 bp
ATGTCTGCAATGAGGTCTCACATTTCCACTGCAGAAGAGAAAGTTGGAGTTCTAGCGAATACCATGTACCGTATTGGTCCAGATATATCCAACCTGCGAGAGGCAATGACATTGTTACATGATTCAATGGTGAAGTTGAAGTCAGGAGATGTGACCGGCTTAGTGGATGAGGAGGAGGATGTGAACGCCCATATCTCGAAACCAGTCGGCCCTAACAGTGATGGTAAAGGGTCTCAGCCCTTTAATGGCAGTGGGGAGGCGAAGAAACAGAGGCGGCGTAAGTTTGGCACTGTGGCAAAACTATCCCCTTCAGACATGGATATGCTGAAGTATTTATCTAGCAAGAAGGGTCGTGCCGAGGACAGCCTAGGAAGTGTTGAAGTTGGGAGATTTAGAGAATTCAGCGTGTCTCGTTGGGACCTCCAGTGCCTCAGTCCCACGTGTTCAATTAGCAGCGAGGTGATCAACATCATGGGGGAATACTGTTTTGTGAATCGGGAGGATTGGTGGTTCCTCTCGACTTTATTTTCTGTACGAGCGTGCAAAGGAACTACTATGATTCTTATGCGGGAGTGCAGTCGTACGTATCAGCAACCATTAGCATGTGTAGGCTACGCAAATACTGCGGTCGTCTTAAAGCATGTAAAAAGATATTCATCCCTATTCTTGACGACGTTGTGGATCACTGGTTTCTTGTTGTTGCAAACATCACCGAAGGTGAATGTGAGATATGGGACTGCATCCCGACCTCCCAGCGCAACAACGCCGCAAGAACATGTCTGCTGGGAGAAGTTTTTTTCTTCTGAACTTGAAGTATCAGATCTAGCTCCATCAGCATTGTCCTCGTACAGTTTCACGTATCCTGAGAGCTCCCGAACTGTTCCTAACAAGTACGACTCTGGTATATTCACTATCAGACATGTCCAGTACTACCGAGAGCGGTGGTTCTCTGTGTTCAACTCTGCTGATGAGAGGATTAGGATCGCACTTGAGATTGTGAACAACCCCATGAACGAGTGCTATAAGAGTGTTTGGGATTCTGTGTGCCGCGAAGAGAATGAGATGAGTGAATGCAAGGAACTACCTGCAACAAGTGGGGACGTAGTTGGTGATCACGCAGACCCAGTTATGACAACATCAGGTATGAAGTTGAAGCCTCGTGTTCCACGCCGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

392

Amino Acids

44.02

Weight (kDa)

8.24

Isoelectric Point (pI)

54.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 102, 1093
AccBSI CCGCTC 1 cut(s) 940
AccII CGCG 1 cut(s) 1050
AciI CCGC 6 cut(s) 274, 568, 626, 767, 940, 1048
AclWI GGATC 2 cut(s) 689, 989
AcsI RAATTY 1 cut(s) 398
AcuI CTGAAG 2 cut(s) 294, 347
AcvI CACGTG 1 cut(s) 441
AfaI GTAC 6 cut(s) 68, 534, 583, 848, 893, 929
AfiI CCNNNNNNNGG 2 cut(s) 100, 245
AflIII ACRYGT 3 cut(s) 440, 775, 919
AgsI TTSAA 7 cut(s) 126, 139, 380, 447, 812, 958, 1153
AjuI GAANNNNNNNTTGG 2 cut(s) 27, 59
AloI GAACNNNNNNTCC 2 cut(s) 494, 526
AluBI AGCT 2 cut(s) 827, 870
AluI AGCT 2 cut(s) 827, 870
Alw21I GWGCWC 1 cut(s) 872
Alw26I GTCTC 3 cut(s) 21, 237, 414
AlwI GGATC 2 cut(s) 689, 989
AoxI GGCC 1 cut(s) 208
ApeKI GCWGC 1 cut(s) 453
ApoI RAATTY 1 cut(s) 398
AspA2I CCTAGG 1 cut(s) 367
AspLEI GCGC 1 cut(s) 758
AspS9I GGNCC 3 cut(s) 77, 209, 418
AsuHPI GGTGA 5 cut(s) 142, 472, 702, 730, 1121
AvaII GGWCC 2 cut(s) 77, 418
AvrII CCTAGG 1 cut(s) 367
BanII GRGCYC 1 cut(s) 872
BauI CACGAG 1 cut(s) 1158
BbrPI CACGTG 1 cut(s) 441
Bbv12I GWGCWC 1 cut(s) 872
BbvI GCAGC 1 cut(s) 465
BccI CCATC 2 cut(s) 215, 838
BceAI ACGGC 1 cut(s) 1155
BcgI CGANNNNNNTGC 2 cut(s) 825, 859
BciVI GTATCC 1 cut(s) 870
BclI TGATCA 2 cut(s) 462, 1111
BcoDI GTCTC 3 cut(s) 21, 237, 414
BfaI CTAG 4 cut(s) 53, 339, 368, 824
BfmI CTRYAG 1 cut(s) 30
BfuAI ACCTGC 2 cut(s) 102, 1093
BfuI GTATCC 1 cut(s) 870
BglII AGATCT 1 cut(s) 820
BisI GCNGC 4 cut(s) 275, 454, 767, 1048
BlnI CCTAGG 1 cut(s) 367
BlsI GCNGC 4 cut(s) 276, 455, 768, 1049
BmcAI AGTACT 1 cut(s) 929
Bme18I GGWCC 2 cut(s) 77, 418
BmgT120I GGNCC 3 cut(s) 77, 209, 418
BmiI GGNNCC 2 cut(s) 419, 512
BmrI ACTGGG 1 cut(s) 1118
BmsI GCATC 1 cut(s) 749
BmuI ACTGGG 1 cut(s) 1118
BpmI CTGGAG 1 cut(s) 407
BpuEI CTTGAG 1 cut(s) 1010
BsaAI YACGTR 3 cut(s) 441, 585, 858
BsaBI GATNNNNATC 3 cut(s) 467, 655, 980
BsaI GGTCTC 2 cut(s) 21, 237
BsaJI CCNNGG 2 cut(s) 357, 367
BsaXI ACNNNNNCTCC 2 cut(s) 491, 521
Bsc4I CCNNNNNNNGG 2 cut(s) 100, 245
Bse118I RCCGGY 1 cut(s) 155
Bse1I ACTGG 5 cut(s) 203, 424, 691, 925, 1124
Bse3DI GCAATG 2 cut(s) 15, 111
Bse8I GATNNNNATC 3 cut(s) 467, 655, 980
BseDI CCNNGG 2 cut(s) 357, 367
BseGI GGATG 4 cut(s) 172, 184, 656, 740
BseJI GATNNNNATC 3 cut(s) 467, 655, 980
BseLI CCNNNNNNNGG 2 cut(s) 100, 245
BseMI GCAATG 2 cut(s) 15, 111
BseMII CTCAG 3 cut(s) 248, 445, 855
BseNI ACTGG 5 cut(s) 203, 424, 691, 925, 1124
BseRI GAGGAG 2 cut(s) 185, 188
BseXI GCAGC 1 cut(s) 465
BseYI CCCAGC 2 cut(s) 752, 783
BsgI GTGCAG 1 cut(s) 595
Bsh1236I CGCG 1 cut(s) 1050
Bsh1285I CGRYCG 1 cut(s) 630
BshFI GGCC 1 cut(s) 210
BsiEI CGRYCG 1 cut(s) 630
BsiHKAI GWGCWC 1 cut(s) 872
BsiSI CCGG 1 cut(s) 156
BsiWI CGTACG 1 cut(s) 581
BslFI GGGAC 4 cut(s) 420, 431, 748, 1112
BslI CCNNNNNNNGG 2 cut(s) 100, 245
BsmAI GTCTC 3 cut(s) 21, 237, 414
BsmFI GGGAC 4 cut(s) 420, 431, 748, 1112
BsmI GAATGC 1 cut(s) 1076
BsnI GGCC 1 cut(s) 210
Bso31I GGTCTC 2 cut(s) 21, 237
Bsp1286I GDGCHC 1 cut(s) 872
Bsp143I GATC 5 cut(s) 462, 681, 820, 981, 1111
BspACI CCGC 6 cut(s) 274, 568, 626, 767, 940, 1048
BspANI GGCC 1 cut(s) 210
BspCNI CTCAG 3 cut(s) 247, 444, 856
BspFNI CGCG 1 cut(s) 1050
BspLI GGNNCC 2 cut(s) 419, 512
BspMAI CTGCAG 1 cut(s) 34
BspMI ACCTGC 2 cut(s) 102, 1093
BspPI GGATC 2 cut(s) 689, 989
BspTNI GGTCTC 2 cut(s) 21, 237
BsrBI CCGCTC 1 cut(s) 940
BsrDI GCAATG 2 cut(s) 15, 111
BsrFI RCCGGY 1 cut(s) 155
BsrI ACTGG 5 cut(s) 203, 424, 691, 925, 1124
BssAI RCCGGY 1 cut(s) 155
BssECI CCNNGG 2 cut(s) 357, 367
BssMI GATC 5 cut(s) 462, 681, 820, 981, 1111
BssSI CACGAG 1 cut(s) 1158
BssT1I CCWWGG 1 cut(s) 367
Bst2BI CACGAG 1 cut(s) 1158
Bst4CI ACNGT 6 cut(s) 71, 218, 292, 485, 851, 880
Bst6I CTCTTC 2 cut(s) 30, 1047
BstAPI GCANNNNNTGC 1 cut(s) 623
BstBAI YACGTR 3 cut(s) 441, 585, 858
BstC8I GCNNGC 1 cut(s) 541
BstDEI CTNAG 4 cut(s) 160, 234, 431, 864
BstENI CCTNNNNNAGG 1 cut(s) 98
BstF5I GGATG 4 cut(s) 172, 184, 656, 740
BstFNI CGCG 1 cut(s) 1050
BstHHI GCGC 1 cut(s) 758
BstKTI GATC 5 cut(s) 465, 684, 823, 984, 1114
BstMAI GTCTC 3 cut(s) 21, 237, 414
BstMBI GATC 5 cut(s) 462, 681, 820, 981, 1111
BstMCI CGRYCG 1 cut(s) 630
BstMWI GCNNNNNNNGC 2 cut(s) 623, 833
BstNSI RCATGY 4 cut(s) 606, 644, 779, 923
BstSFI CTRYAG 1 cut(s) 30
BstSNI TACGTA 1 cut(s) 585
BstUI CGCG 1 cut(s) 1050
BstV1I GCAGC 1 cut(s) 465
BstX2I RGATCY 1 cut(s) 820
BstYI RGATCY 1 cut(s) 820
BsuI GTATCC 1 cut(s) 870
BsuRI GGCC 1 cut(s) 210
BtsCI GGATG 4 cut(s) 172, 184, 656, 740
BtsI GCAGTG 2 cut(s) 27, 256
BtsIMutI CAGTG 6 cut(s) 27, 223, 256, 288, 431, 684
BveI ACCTGC 2 cut(s) 102, 1093
Cac8I GCNNGC 1 cut(s) 541
CfoI GCGC 1 cut(s) 758
Cfr10I RCCGGY 1 cut(s) 155
Cfr13I GGNCC 3 cut(s) 77, 209, 418
Csp6I GTAC 6 cut(s) 67, 533, 582, 847, 892, 928
CviAII CATG 9 cut(s) 64, 119, 316, 472, 603, 641, 776, 920, 1009
CviJI RGCY 8 cut(s) 159, 210, 238, 366, 612, 827, 870, 1156
CviKI_1 RGCY 8 cut(s) 159, 210, 238, 366, 612, 827, 870, 1156
CviQI GTAC 6 cut(s) 67, 533, 582, 847, 892, 928
DdeI CTNAG 4 cut(s) 160, 234, 431, 864
DpnI GATC 5 cut(s) 464, 683, 822, 983, 1113
DpnII GATC 5 cut(s) 462, 681, 820, 981, 1111
Eam1104I CTCTTC 2 cut(s) 30, 1047
EarI CTCTTC 2 cut(s) 30, 1047
Ecl136II GAGCTC 1 cut(s) 870
Eco105I TACGTA 1 cut(s) 585
Eco130I CCWWGG 1 cut(s) 367
Eco24I GRGCYC 1 cut(s) 872
Eco31I GGTCTC 2 cut(s) 21, 237
Eco47I GGWCC 2 cut(s) 77, 418
Eco53kI GAGCTC 1 cut(s) 870
Eco57I CTGAAG 2 cut(s) 294, 347
Eco72I CACGTG 1 cut(s) 441
EcoICRI GAGCTC 1 cut(s) 870
EcoNI CCTNNNNNAGG 1 cut(s) 98
EcoO109I RGGNCCY 1 cut(s) 418
EcoRI GAATTC 1 cut(s) 398
EcoT14I CCWWGG 1 cut(s) 367
EcoT38I GRGCYC 1 cut(s) 872
ErhI CCWWGG 1 cut(s) 367
FaeI CATG 9 cut(s) 67, 122, 319, 475, 606, 644, 779, 923, 1012
FaqI GGGAC 4 cut(s) 420, 431, 748, 1112
FatI CATG 9 cut(s) 63, 118, 315, 471, 602, 640, 775, 919, 1008
FauI CCCGC 1 cut(s) 561
FbaI TGATCA 2 cut(s) 462, 1111
Fnu4HI GCNGC 4 cut(s) 275, 454, 767, 1048
FokI GGATG 4 cut(s) 179, 191, 643, 727
FriOI GRGCYC 1 cut(s) 872
Fsp4HI GCNGC 4 cut(s) 275, 454, 767, 1048
FspBI CTAG 4 cut(s) 53, 339, 368, 824
GlaI GCGC 1 cut(s) 757
GluI GCNGC 4 cut(s) 275, 454, 767, 1048
GsaI CCCAGC 2 cut(s) 756, 787
GsuI CTGGAG 1 cut(s) 407
HaeIII GGCC 1 cut(s) 210
HapII CCGG 1 cut(s) 156
HhaI GCGC 1 cut(s) 758
Hin1II CATG 9 cut(s) 67, 122, 319, 475, 606, 644, 779, 923, 1012
Hin6I GCGC 1 cut(s) 756
HinP1I GCGC 1 cut(s) 756
HinfI GANTC 5 cut(s) 122, 493, 559, 896, 1037
HpaII CCGG 1 cut(s) 156
HphI GGTGA 5 cut(s) 142, 472, 702, 730, 1121
Hpy166II GTNNAC 2 cut(s) 184, 1000
Hpy188I TCNGA 4 cut(s) 313, 805, 820, 917
Hpy188III TCNNGA 9 cut(s) 80, 144, 196, 497, 517, 667, 744, 863, 873
Hpy8I GTNNAC 2 cut(s) 184, 1000
Hpy99I CGWCG 1 cut(s) 676
HpyAV CCTTC 3 cut(s) 318, 340, 709
HpyCH4III ACNGT 6 cut(s) 71, 218, 292, 485, 851, 880
HpyCH4IV ACGT 5 cut(s) 440, 584, 674, 857, 1101
HpyCH4V TGCA 8 cut(s) 8, 32, 543, 576, 703, 740, 1074, 1088
HpyF10VI GCNNNNNNNGC 2 cut(s) 623, 833
HpyF3I CTNAG 4 cut(s) 160, 234, 431, 864
HpySE526I ACGT 5 cut(s) 440, 584, 674, 857, 1101
Hsp92II CATG 9 cut(s) 67, 122, 319, 475, 606, 644, 779, 923, 1012
HspAI GCGC 1 cut(s) 756
Ksp22I TGATCA 2 cut(s) 462, 1111
Kzo9I GATC 5 cut(s) 462, 681, 820, 981, 1111
LmnI GCTCC 2 cut(s) 832, 875
Lsp1109I GCAGC 1 cut(s) 465
LweI GCATC 1 cut(s) 749
MaeI CTAG 4 cut(s) 53, 339, 368, 824
MaeII ACGT 5 cut(s) 440, 584, 674, 857, 1101
MaeIII GTNAC 2 cut(s) 114, 151
MalI GATC 5 cut(s) 464, 683, 822, 983, 1113
MbiI CCGCTC 1 cut(s) 940
MboI GATC 5 cut(s) 462, 681, 820, 981, 1111
MboII GAAGA 4 cut(s) 47, 274, 792, 1064
MflI RGATCY 1 cut(s) 820
MhlI GDGCHC 1 cut(s) 872
MluCI AATT 2 cut(s) 398, 447
MlyI GAGTC 1 cut(s) 890
MmeI TCCRAC 2 cut(s) 25, 114
MseI TTAA 2 cut(s) 243, 635
MslI CAYNNNNRTG 2 cut(s) 320, 601
MspI CCGG 1 cut(s) 156
Mva1269I GAATGC 1 cut(s) 1076
MvnI CGCG 1 cut(s) 1050
MwoI GCNNNNNNNGC 2 cut(s) 623, 833
NdeII GATC 5 cut(s) 462, 681, 820, 981, 1111
NlaIII CATG 9 cut(s) 67, 122, 319, 475, 606, 644, 779, 923, 1012
NlaIV GGNNCC 2 cut(s) 419, 512
NmeAIII GCCGAG 1 cut(s) 382
NmuCI GTSAC 1 cut(s) 151
NspI RCATGY 4 cut(s) 606, 644, 779, 923
PciI ACATGT 2 cut(s) 775, 919
PctI GAATGC 1 cut(s) 1076
PfeI GAWTC 4 cut(s) 122, 493, 559, 1037
Pfl23II CGTACG 1 cut(s) 581
PkrI GCNGC 4 cut(s) 276, 455, 768, 1049
PleI GAGTC 1 cut(s) 890
PmaCI CACGTG 1 cut(s) 441
PmlI CACGTG 1 cut(s) 441
PpsI GAGTC 1 cut(s) 890
Ppu21I YACGTR 3 cut(s) 441, 585, 858
PpuMI RGGWCCY 1 cut(s) 418
PscI ACATGT 2 cut(s) 775, 919
Psp124BI GAGCTC 1 cut(s) 872
Psp5II RGGWCCY 1 cut(s) 418
PspCI CACGTG 1 cut(s) 441
PspFI CCCAGC 2 cut(s) 752, 783
PspLI CGTACG 1 cut(s) 581
PspN4I GGNNCC 2 cut(s) 419, 512
PspPI GGNCC 3 cut(s) 77, 209, 418
PspPPI RGGWCCY 1 cut(s) 418
PstI CTGCAG 1 cut(s) 34
PsuI RGATCY 1 cut(s) 820
RsaI GTAC 6 cut(s) 68, 534, 583, 848, 893, 929
RsaNI GTAC 6 cut(s) 67, 533, 582, 847, 892, 928
RseI CAYNNNNRTG 2 cut(s) 320, 601
SacI GAGCTC 1 cut(s) 872
SaqAI TTAA 2 cut(s) 243, 635
SatI GCNGC 4 cut(s) 275, 454, 767, 1048
Sau3AI GATC 5 cut(s) 462, 681, 820, 981, 1111
Sau96I GGNCC 3 cut(s) 77, 209, 418
ScaI AGTACT 1 cut(s) 929
SchI GAGTC 1 cut(s) 890
SduI GDGCHC 1 cut(s) 872
SfaNI GCATC 1 cut(s) 749
SfcI CTRYAG 1 cut(s) 30
SinI GGWCC 2 cut(s) 77, 418
SmiMI CAYNNNNRTG 2 cut(s) 320, 601
SmlI CTYRAG 1 cut(s) 989
SmoI CTYRAG 1 cut(s) 989
SnaBI TACGTA 1 cut(s) 585
Sse9I AATT 2 cut(s) 398, 447
SsiI CCGC 6 cut(s) 274, 568, 626, 767, 940, 1048
SspMI CTAG 4 cut(s) 53, 339, 368, 824
SstI GAGCTC 1 cut(s) 872
StyI CCWWGG 1 cut(s) 367
TaaI ACNGT 6 cut(s) 71, 218, 292, 485, 851, 880
TaiI ACGT 5 cut(s) 443, 587, 677, 860, 1104
TaqI TCGA 2 cut(s) 197, 518
TasI AATT 2 cut(s) 398, 447
TatI WGTACW 1 cut(s) 927
TauI GCSGC 3 cut(s) 277, 769, 1050
TfiI GAWTC 4 cut(s) 122, 493, 559, 1037
Tru1I TTAA 2 cut(s) 243, 635
Tru9I TTAA 2 cut(s) 243, 635
TscAI CASTG 6 cut(s) 34, 223, 256, 295, 431, 691
TseFI GTSAC 1 cut(s) 151
TseI GCWGC 1 cut(s) 453
Tsp45I GTSAC 1 cut(s) 151
TspDTI ATGAA 3 cut(s) 645, 1025, 1160
TspRI CASTG 6 cut(s) 34, 223, 256, 295, 431, 691
VpaK11BI GGWCC 2 cut(s) 77, 418
XagI CCTNNNNNAGG 1 cut(s) 98
XapI RAATTY 1 cut(s) 398
XceI RCATGY 4 cut(s) 606, 644, 779, 923
XmaJI CCTAGG 1 cut(s) 367
XspI CTAG 4 cut(s) 53, 339, 368, 824
ZrmI AGTACT 1 cut(s) 929
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.