Rorug06G0184400

protein desumoylation

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
29232444 .. 29239990
7547 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0184400.1

Sequence Viewer

Length: 1464 bp
ATGGACGCCGCTGTTTCATGCCCCGGTGTCCTTCCCCAAATGAAGCTCTCCAGCTCCGGCCTCTCCCGCTCTGATCATAAATTCCAGATTGGTAGGTCTTACGCGAGGTCAATTGAAGTTCTCTCTTGCAATAAAGGATTGCAAATTGTTCCGAAAAAGCTCGAATTCTTGTGTTCTGCTGCATCGAGAGATGATGAGAGGAATGAAATGGTGTTTGGGGCATCACATTGGGAGAAGAAAAGCCCTGTTGGGGAGACATTGTGTGTTGCTGCGGGTGTATGCACTTATGGTGGGACTGCTGTGGAGTCTCATCACTCCCACACTGTGGAAGAGAAGGTTGGAGTGCTGCTCCTGAATCTTGGAGGACCCGAGACGCTTGATGATGTTCAACCGTTTCTGTTTAATCTATTTGCTGATCCGGATATCATACGTTTACCAAGGGTGTTTCAGTTTCTTCAGAAGCCACTGGCGAAATTGATTTCTGTGCTTCGAGCTCCTAAGAGCAAGGAAGGGTATGCTTCTATAGGAGGTGGTTCACCCTTGCGTAAGATGACAGATGAGCAGGCAAATGCACTGAAAATGGCTTTGGAATCGAAGGACATGCCGGTGAATGTCTATGTGGGAATGCGGTACTGGTTCCCGTTCACTGAGGAAGCAGTTCATCAAATTAAGAGGGACAGAATAACCAGGCTAGTTGTCCTGCCTCTATATCCTCAATTCTCTATCTCTACAACTGGATCAAGCGTTCGTGTGCTCCAGAAGATTTTCAGGAACGATCCATATTTATCAAGGTTGCCTGTTTCAGTTATAAACTCATGGTATCAACGTGAAGGTTATATTAAGTCAATGGCTGACTTGATCTCAAAAGAGCTAGAGAGTTTTTCTGAGCCTGCACAGGTCATGATATTCTTCAGTGCCCACGGGGTACCACTAAGTTATGTGAAGGACTCTGGAGATCCATACAAAGATCAAATGGAGGAGTGTATCTTCTTAATAATGAAAGAGTTGAAAGCTAGAGGAATCAATAATGAACATACTCTTGCCTACCAGAGCCGAGTTGGTCCTGTACAATGGTTGAAGCCATACACTGATGAAGTTCTTGTTGAGCTTGGCCAGAAAGGAGTAAAAAGTCTCCTAGCTGTTCCAGTCAGCTTTGTGAGTGAGCACATAGAAACTCTTGAAGAGATAGATATGGAGTACAAGGAATTGGCCCTCGAATCCGGCATTGAGAATTGGGGCCGAGTCCCTGCCCTCGGCCTTACCCCTTCATTTATAACAGATCTGGCAGATGCAGTTATAGAGGCTCTACCACTGGCAGCAGCCACTTCAACCCCAAAGATTACCTCAGCAGTTGATCACGACCCTATGACATGGGTTATCAAAATGTTCTTTGGTTCATTTCTAGCATTCTTTTTGTTCTTTTCGCCAAAAATGCTAATGGCATTCAGGAACCACCTGATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

487

Amino Acids

54.37

Weight (kDa)

6.17

Isoelectric Point (pI)

45.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ferrochelatase PF00762 112 - 435 6e-111 Ferrochelatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 809, 1274
Acc65I GGTACC 1 cut(s) 925
AccB1I GGYRCC 1 cut(s) 925
AccB7I CCANNNNNTGG 1 cut(s) 325
AccBSI CCGCTC 1 cut(s) 69
AccII CGCG 1 cut(s) 104
AccIII TCCGGA 1 cut(s) 418
AciI CCGC 4 cut(s) 9, 67, 272, 628
AclWI GGATC 4 cut(s) 410, 745, 770, 950
AcoI YGGCCR 1 cut(s) 1111
AcsI RAATTY 2 cut(s) 80, 164
AcuI CTGAAG 2 cut(s) 440, 895
AcyI GRCGYC 1 cut(s) 6
AdeI CACNNNGTG 1 cut(s) 325
AfaI GTAC 4 cut(s) 632, 927, 1068, 1199
AfiI CCNNNNNNNGG 3 cut(s) 250, 325, 1253
AgsI TTSAA 6 cut(s) 116, 389, 1009, 1078, 1181, 1329
AjnI CCWGG 1 cut(s) 686
AjuI GAANNNNNNNTTGG 6 cut(s) 198, 230, 321, 353, 569, 601
AloI GAACNNNNNNTCC 2 cut(s) 729, 761
AluBI AGCT 9 cut(s) 46, 54, 160, 494, 871, 1013, 1108, 1139, 1152
AluI AGCT 9 cut(s) 46, 54, 160, 494, 871, 1013, 1108, 1139, 1152
Alw21I GWGCWC 3 cut(s) 496, 756, 1167
Alw26I GTCTC 4 cut(s) 248, 312, 365, 1136
AlwI GGATC 4 cut(s) 410, 745, 770, 950
Ama87I CYCGRG 1 cut(s) 368
Aor13HI TCCGGA 1 cut(s) 418
AoxI GGCC 5 cut(s) 58, 1111, 1209, 1237, 1255
ApeKI GCWGC 5 cut(s) 179, 269, 346, 1316, 1319
ApoI RAATTY 2 cut(s) 80, 164
Asp700I GAANNNNTTC 2 cut(s) 657, 764
Asp718I GGTACC 1 cut(s) 925
AspS9I GGNCC 4 cut(s) 365, 1061, 1210, 1237
AsuC2I CCSGG 1 cut(s) 24
AsuHPI GGTGA 2 cut(s) 528, 619
AvaI CYCGRG 1 cut(s) 368
AvaII GGWCC 2 cut(s) 365, 1061
BaeGI GKGCMC 1 cut(s) 919
BalI TGGCCA 1 cut(s) 1113
BanI GGYRCC 1 cut(s) 925
BanII GRGCYC 1 cut(s) 496
Bbv12I GWGCWC 3 cut(s) 496, 756, 1167
BbvCI CCTCAGC 1 cut(s) 1345
BbvI GCAGC 5 cut(s) 166, 256, 333, 1328, 1331
BcgI CGANNNNNNTGC 2 cut(s) 583, 617
BciT130I CCWGG 1 cut(s) 688
BclI TGATCA 2 cut(s) 73, 1354
BcnI CCSGG 1 cut(s) 24
BcoDI GTCTC 4 cut(s) 248, 312, 365, 1136
BfaI CTAG 5 cut(s) 692, 872, 1014, 1136, 1403
BfmI CTRYAG 1 cut(s) 522
BglII AGATCT 1 cut(s) 1279
BisI GCNGC 6 cut(s) 9, 180, 270, 347, 1317, 1320
BlsI GCNGC 6 cut(s) 10, 181, 271, 348, 1318, 1321
Bme1390I CCNGG 2 cut(s) 24, 688
Bme18I GGWCC 2 cut(s) 365, 1061
BmeT110I CYCGRG 1 cut(s) 368
BmgT120I GGNCC 4 cut(s) 365, 1061, 1210, 1237
BmiI GGNNCC 5 cut(s) 367, 638, 927, 1238, 1451
BmrFI CCNGG 2 cut(s) 24, 688
BmsI GCATC 3 cut(s) 191, 230, 1279
BplI GAGNNNNNCTC 2 cut(s) 333, 365
BpmI CTGGAG 3 cut(s) 34, 740, 972
Bpu10I CCTNAGC 1 cut(s) 1345
BpuMI CCSGG 1 cut(s) 24
BsaHI GRCGYC 1 cut(s) 6
BsaJI CCNNGG 4 cut(s) 22, 437, 919, 1252
BsaWI WCCGGW 1 cut(s) 418
BsaXI ACNNNNNCTCC 2 cut(s) 245, 275
Bsc4I CCNNNNNNNGG 3 cut(s) 250, 325, 1253
Bse118I RCCGGY 1 cut(s) 604
Bse1I ACTGG 5 cut(s) 471, 638, 739, 1145, 1317
BseAI TCCGGA 1 cut(s) 418
BseBI CCWGG 1 cut(s) 688
BseDI CCNNGG 4 cut(s) 22, 437, 919, 1252
BseLI CCNNNNNNNGG 3 cut(s) 250, 325, 1253
BseMII CTCAG 3 cut(s) 639, 876, 1359
BseNI ACTGG 5 cut(s) 471, 638, 739, 1145, 1317
BseRI GAGGAG 1 cut(s) 992
BseSI GKGCMC 1 cut(s) 919
BseXI GCAGC 5 cut(s) 166, 256, 333, 1328, 1331
BsgI GTGCAG 1 cut(s) 876
Bsh1236I CGCG 1 cut(s) 104
BshFI GGCC 5 cut(s) 60, 1113, 1211, 1239, 1257
BshNI GGYRCC 1 cut(s) 925
BsiHKAI GWGCWC 3 cut(s) 496, 756, 1167
BsiHKCI CYCGRG 1 cut(s) 368
BsiSI CCGG 5 cut(s) 24, 57, 419, 605, 1221
BslFI GGGAC 3 cut(s) 307, 689, 1229
BslI CCNNNNNNNGG 3 cut(s) 250, 325, 1253
BsmAI GTCTC 4 cut(s) 248, 312, 365, 1136
BsmBI CGTCTC 1 cut(s) 365
BsmFI GGGAC 3 cut(s) 307, 689, 1229
BsmI GAATGC 3 cut(s) 630, 1406, 1442
BsnI GGCC 5 cut(s) 60, 1113, 1211, 1239, 1257
BsoBI CYCGRG 1 cut(s) 368
Bsp1286I GDGCHC 4 cut(s) 496, 756, 919, 1167
Bsp13I TCCGGA 1 cut(s) 418
Bsp1407I TGTACA 1 cut(s) 1066
Bsp143I GATC 9 cut(s) 73, 415, 737, 775, 858, 955, 967, 1279, 1354
BspACI CCGC 4 cut(s) 9, 67, 272, 628
BspANI GGCC 5 cut(s) 60, 1113, 1211, 1239, 1257
BspCNI CTCAG 3 cut(s) 640, 877, 1358
BspEI TCCGGA 1 cut(s) 418
BspFNI CGCG 1 cut(s) 104
BspHI TCATGA 1 cut(s) 900
BspLI GGNNCC 5 cut(s) 367, 638, 927, 1238, 1451
BspPI GGATC 4 cut(s) 410, 745, 770, 950
BspT107I GGYRCC 1 cut(s) 925
BsrBI CCGCTC 1 cut(s) 69
BsrFI RCCGGY 1 cut(s) 604
BsrGI TGTACA 1 cut(s) 1066
BsrI ACTGG 5 cut(s) 471, 638, 739, 1145, 1317
BssAI RCCGGY 1 cut(s) 604
BssECI CCNNGG 4 cut(s) 22, 437, 919, 1252
BssMI GATC 9 cut(s) 73, 415, 737, 775, 858, 955, 967, 1279, 1354
BssNI GRCGYC 1 cut(s) 6
BssT1I CCWWGG 1 cut(s) 437
Bst2UI CCWGG 1 cut(s) 688
Bst4CI ACNGT 2 cut(s) 325, 393
Bst6I CTCTTC 2 cut(s) 324, 1176
BstACI GRCGYC 1 cut(s) 6
BstAUI TGTACA 1 cut(s) 1066
BstC8I GCNNGC 2 cut(s) 564, 891
BstDEI CTNAG 5 cut(s) 498, 648, 885, 932, 1345
BstDSI CCRYGG 1 cut(s) 919
BstFNI CGCG 1 cut(s) 104
BstKTI GATC 9 cut(s) 76, 418, 740, 778, 861, 958, 970, 1282, 1357
BstMAI GTCTC 4 cut(s) 248, 312, 365, 1136
BstMBI GATC 9 cut(s) 73, 415, 737, 775, 858, 955, 967, 1279, 1354
BstMWI GCNNNNNNNGC 2 cut(s) 66, 1432
BstNI CCWGG 1 cut(s) 688
BstNSI RCATGY 1 cut(s) 604
BstSCI CCNGG 2 cut(s) 22, 686
BstSFI CTRYAG 1 cut(s) 522
BstSLI GKGCMC 1 cut(s) 919
BstUI CGCG 1 cut(s) 104
BstV1I GCAGC 5 cut(s) 166, 256, 333, 1328, 1331
BstX2I RGATCY 2 cut(s) 955, 1279
BstYI RGATCY 2 cut(s) 955, 1279
BsuRI GGCC 5 cut(s) 60, 1113, 1211, 1239, 1257
BtgI CCRYGG 1 cut(s) 919
BtsIMutI CAGTG 7 cut(s) 321, 464, 572, 645, 919, 1086, 1310
Cac8I GCNNGC 2 cut(s) 564, 891
CciI TCATGA 1 cut(s) 900
Cfr10I RCCGGY 1 cut(s) 604
Cfr13I GGNCC 4 cut(s) 365, 1061, 1210, 1237
CseI GACGC 2 cut(s) 14, 382
Csp6I GTAC 4 cut(s) 631, 926, 1067, 1198
CspCI CAANNNNNGTGG 1 cut(s) 1442
CviAII CATG 5 cut(s) 18, 601, 816, 901, 1371
CviQI GTAC 4 cut(s) 631, 926, 1067, 1198
DdeI CTNAG 5 cut(s) 498, 648, 885, 932, 1345
DpnI GATC 9 cut(s) 75, 417, 739, 777, 860, 957, 969, 1281, 1356
DpnII GATC 9 cut(s) 73, 415, 737, 775, 858, 955, 967, 1279, 1354
DraIII CACNNNGTG 1 cut(s) 325
EaeI YGGCCR 1 cut(s) 1111
Eam1104I CTCTTC 2 cut(s) 324, 1176
EarI CTCTTC 2 cut(s) 324, 1176
Ecl136II GAGCTC 1 cut(s) 494
Eco130I CCWWGG 1 cut(s) 437
Eco24I GRGCYC 1 cut(s) 496
Eco32I GATATC 1 cut(s) 424
Eco47I GGWCC 2 cut(s) 365, 1061
Eco53kI GAGCTC 1 cut(s) 494
Eco57I CTGAAG 2 cut(s) 440, 895
Eco88I CYCGRG 1 cut(s) 368
EcoICRI GAGCTC 1 cut(s) 494
EcoO109I RGGNCCY 1 cut(s) 365
EcoRI GAATTC 1 cut(s) 164
EcoRII CCWGG 1 cut(s) 686
EcoRV GATATC 1 cut(s) 424
EcoT14I CCWWGG 1 cut(s) 437
EcoT38I GRGCYC 1 cut(s) 496
ErhI CCWWGG 1 cut(s) 437
Esp3I CGTCTC 1 cut(s) 365
FaeI CATG 5 cut(s) 21, 604, 819, 904, 1374
FaqI GGGAC 3 cut(s) 307, 689, 1229
FatI CATG 5 cut(s) 17, 600, 815, 900, 1370
FauI CCCGC 2 cut(s) 74, 265
FbaI TGATCA 2 cut(s) 73, 1354
Fnu4HI GCNGC 6 cut(s) 9, 180, 270, 347, 1317, 1320
FriOI GRGCYC 1 cut(s) 496
Fsp4HI GCNGC 6 cut(s) 9, 180, 270, 347, 1317, 1320
FspBI CTAG 5 cut(s) 692, 872, 1014, 1136, 1403
GluI GCNGC 6 cut(s) 9, 180, 270, 347, 1317, 1320
GsuI CTGGAG 3 cut(s) 34, 740, 972
HaeIII GGCC 5 cut(s) 60, 1113, 1211, 1239, 1257
HapII CCGG 5 cut(s) 24, 57, 419, 605, 1221
HgaI GACGC 2 cut(s) 14, 382
Hin1I GRCGYC 1 cut(s) 6
Hin1II CATG 5 cut(s) 21, 604, 819, 904, 1374
HinfI GANTC 7 cut(s) 305, 355, 590, 947, 1020, 1217, 1242
HpaII CCGG 5 cut(s) 24, 57, 419, 605, 1221
HphI GGTGA 2 cut(s) 528, 619
Hpy166II GTNNAC 3 cut(s) 434, 536, 645
Hpy188I TCNGA 4 cut(s) 73, 153, 459, 886
Hpy8I GTNNAC 3 cut(s) 434, 536, 645
HpyAV CCTTC 7 cut(s) 41, 328, 503, 589, 824, 937, 1275
HpyCH4III ACNGT 2 cut(s) 325, 393
HpyCH4IV ACGT 2 cut(s) 430, 826
HpyCH4V TGCA 7 cut(s) 129, 142, 182, 282, 572, 893, 1292
HpyF10VI GCNNNNNNNGC 2 cut(s) 66, 1432
HpyF3I CTNAG 5 cut(s) 498, 648, 885, 932, 1345
HpySE526I ACGT 2 cut(s) 430, 826
Hsp92I GRCGYC 1 cut(s) 6
Hsp92II CATG 5 cut(s) 21, 604, 819, 904, 1374
Kpn2I TCCGGA 1 cut(s) 418
KpnI GGTACC 1 cut(s) 929
Ksp22I TGATCA 2 cut(s) 73, 1354
Kzo9I GATC 9 cut(s) 73, 415, 737, 775, 858, 955, 967, 1279, 1354
LmnI GCTCC 4 cut(s) 59, 354, 499, 759
Lsp1109I GCAGC 5 cut(s) 166, 256, 333, 1328, 1331
LweI GCATC 3 cut(s) 191, 230, 1279
MaeI CTAG 5 cut(s) 692, 872, 1014, 1136, 1403
MaeII ACGT 2 cut(s) 430, 826
MalI GATC 9 cut(s) 75, 417, 739, 777, 860, 957, 969, 1281, 1356
MbiI CCGCTC 1 cut(s) 69
MboI GATC 9 cut(s) 73, 415, 737, 775, 858, 955, 967, 1279, 1354
MboII GAAGA 7 cut(s) 247, 341, 446, 772, 901, 979, 1193
MfeI CAATTG 1 cut(s) 111
MflI RGATCY 2 cut(s) 955, 1279
MhlI GDGCHC 4 cut(s) 496, 756, 919, 1167
MlsI TGGCCA 1 cut(s) 1113
MluCI AATT 9 cut(s) 80, 111, 144, 164, 473, 666, 716, 1205, 1231
MluNI TGGCCA 1 cut(s) 1113
MlyI GAGTC 3 cut(s) 314, 941, 1251
MmeI TCCRAC 1 cut(s) 319
Mox20I TGGCCA 1 cut(s) 1113
MroI TCCGGA 1 cut(s) 418
MroXI GAANNNNTTC 2 cut(s) 657, 764
MscI TGGCCA 1 cut(s) 1113
MseI TTAA 4 cut(s) 402, 669, 840, 992
MslI CAYNNNNRTG 1 cut(s) 605
Msp20I TGGCCA 1 cut(s) 1113
MspA1I CMGCKG 1 cut(s) 11
MspI CCGG 5 cut(s) 24, 57, 419, 605, 1221
MspR9I CCNGG 2 cut(s) 24, 688
MunI CAATTG 1 cut(s) 111
Mva1269I GAATGC 3 cut(s) 630, 1406, 1442
MvaI CCWGG 1 cut(s) 688
MvnI CGCG 1 cut(s) 104
MwoI GCNNNNNNNGC 2 cut(s) 66, 1432
NciI CCSGG 1 cut(s) 24
NdeII GATC 9 cut(s) 73, 415, 737, 775, 858, 955, 967, 1279, 1354
NlaIII CATG 5 cut(s) 21, 604, 819, 904, 1374
NlaIV GGNNCC 5 cut(s) 367, 638, 927, 1238, 1451
NmeAIII GCCGAG 3 cut(s) 1079, 1233, 1265
NspI RCATGY 1 cut(s) 604
PagI TCATGA 1 cut(s) 900
PctI GAATGC 3 cut(s) 630, 1406, 1442
PdmI GAANNNNTTC 2 cut(s) 657, 764
PfeI GAWTC 4 cut(s) 355, 590, 1020, 1217
PflMI CCANNNNNTGG 1 cut(s) 325
PkrI GCNGC 6 cut(s) 10, 181, 271, 348, 1318, 1321
PleI GAGTC 3 cut(s) 313, 941, 1250
PpsI GAGTC 3 cut(s) 313, 941, 1250
PpuMI RGGWCCY 1 cut(s) 365
PsiI TTATAA 2 cut(s) 809, 1274
Psp124BI GAGCTC 1 cut(s) 496
Psp5II RGGWCCY 1 cut(s) 365
Psp6I CCWGG 1 cut(s) 686
PspGI CCWGG 1 cut(s) 686
PspN4I GGNNCC 5 cut(s) 367, 638, 927, 1238, 1451
PspPI GGNCC 4 cut(s) 365, 1061, 1210, 1237
PspPPI RGGWCCY 1 cut(s) 365
PsuI RGATCY 2 cut(s) 955, 1279
RsaI GTAC 4 cut(s) 632, 927, 1068, 1199
RsaNI GTAC 4 cut(s) 631, 926, 1067, 1198
RseI CAYNNNNRTG 1 cut(s) 605
SacI GAGCTC 1 cut(s) 496
SaqAI TTAA 4 cut(s) 402, 669, 840, 992
SatI GCNGC 6 cut(s) 9, 180, 270, 347, 1317, 1320
Sau3AI GATC 9 cut(s) 73, 415, 737, 775, 858, 955, 967, 1279, 1354
Sau96I GGNCC 4 cut(s) 365, 1061, 1210, 1237
SchI GAGTC 3 cut(s) 314, 941, 1251
ScrFI CCNGG 2 cut(s) 24, 688
SduI GDGCHC 4 cut(s) 496, 756, 919, 1167
SfaNI GCATC 3 cut(s) 191, 230, 1279
SfcI CTRYAG 1 cut(s) 522
SinI GGWCC 2 cut(s) 365, 1061
SmiMI CAYNNNNRTG 1 cut(s) 605
Sse9I AATT 9 cut(s) 80, 111, 144, 164, 473, 666, 716, 1205, 1231
SsiI CCGC 4 cut(s) 9, 67, 272, 628
SspMI CTAG 5 cut(s) 692, 872, 1014, 1136, 1403
SstI GAGCTC 1 cut(s) 496
StyD4I CCNGG 2 cut(s) 22, 686
StyI CCWWGG 1 cut(s) 437
TaaI ACNGT 2 cut(s) 325, 393
TaiI ACGT 2 cut(s) 433, 829
TaqI TCGA 5 cut(s) 162, 185, 490, 593, 1215
TasI AATT 9 cut(s) 80, 111, 144, 164, 473, 666, 716, 1205, 1231
TatI WGTACW 2 cut(s) 1066, 1197
TauI GCSGC 1 cut(s) 11
TfiI GAWTC 4 cut(s) 355, 590, 1020, 1217
Tru1I TTAA 4 cut(s) 402, 669, 840, 992
Tru9I TTAA 4 cut(s) 402, 669, 840, 992
TscAI CASTG 7 cut(s) 328, 471, 579, 652, 919, 1093, 1317
TseI GCWGC 5 cut(s) 179, 269, 346, 1316, 1319
TspDTI ATGAA 9 cut(s) 6, 56, 219, 650, 1013, 1044, 1107, 1257, 1386
TspRI CASTG 7 cut(s) 328, 471, 579, 652, 919, 1093, 1317
Van91I CCANNNNNTGG 1 cut(s) 325
VpaK11BI GGWCC 2 cut(s) 365, 1061
XapI RAATTY 2 cut(s) 80, 164
XceI RCATGY 1 cut(s) 604
XcmI CCANNNNNNNNNTGG 1 cut(s) 1055
XmnI GAANNNNTTC 2 cut(s) 657, 764
XspI CTAG 5 cut(s) 692, 872, 1014, 1136, 1403
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.