FvH4_2g25151

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000030
Physical Location & Seq
Reverse (-)
20509452 .. 20512789
3338 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g25151.t1

Sequence Viewer

Length: 2277 bp
ATGGACGATAAGGATGCCGAGAGGAGGAAACGTGAGCCTGAGTATGCAAGGAATTCTGAATCAACGAAGAGAGCCTGTCATGAAGTAGTTTTCCATCTGGAGGAGACGTATATTGAAAAGAGGAAGAATGATGTGGACAGAGGCTGTGGAATTTCAACAGGATGTGACCCGAAAGCGTTTAAAGCTGTAGCGTCCCGAATATCGAATGAGAAGGTATTCCTGATTCAAGAATTGGGATTTGGGCCGGTGCGGCAGTTCCGGTGTAGTGAGTTAAATCTGTCGCTATGCAAAATGTTGTTGGACAATTTTAATGTTGAAAAATGTACGATCAAGATACACGGGCGAAACCTGACAGTTATGGAGAAGGACTTTGACCGGCTAATGGGATTGAGGTGTCGCGGCACAGAAGTATCCCTACCAAAGAGGGTCATCCATGATCCAGAAGTAGCGGATTTACAAGGTATAATTTGGGGGGTTGATAAAGAGATGAGTATTGACATATTGAGGAGGAATGTAGTGTTTTCAGACGATCCAGACAACTTGTTTGTGGTTAGTTTTGTATTGTTTGCGCTGGCTATCATGTATTGCCCCACCAGAGCAGGTTATGTAGATCCAAGGCTGTTATTATTGGTGAAGGACAGGAAGCGTATGAGGAGTTATAACTGGGGTCGTTTAGCGTTTAGAAAATTGTTGGAGGAAGTTCAGCTGTATCAGAACAACAAACCCGGCCATGTTGGGGGCTGCCTTGTCTTCCTACAACTGTTCTATTTGAGTGTTATAGGGGAAAAAATGTTCATAATTCCAAAGAGTGTCCCTCCGGTAATGACATGGGGGAGGAAAGAGTCGAACATGATATATGAAAGGGTTGAAGAGAAAGGAGGTTTTTACAAGACTGATGGTATATGGGTAACGAAGAGATACTCAAGTGTTAGATCGACCGAGTTCTCGGGTTCCCGGGATTACAGCACGGGACTGAAAACAAATCTGGTGGACGACATGTCTGCAATGAGGTCTCACATTTCCACTGCAGAAGAGAAAGTTGGAGTTCTAGCGAATACCATGTACCGTATTGGTCCAGATATATCCAACCTGCGAGAGGCAATGACATTGTTACATGATTCAATGGTGAAGTTGAAGTCAGGAGATGTGACCGGCTTAGTGGATGAGGTGTTCAGAGCAGTCCGTTCAATTGAAGGTGGCAATGTTCATCTAGGGGATTACAGTGATTACAGTGGGTTTGAGAAAAACCAATGTACAAGGGAGGAGGATGTGAACGCCCATATCTCGAAACCAGTCGGCCCTAACAGTGATGGTAAAGGGTCTCAGCCCTTTAATGGCAGTGGGGAGGCGAAGAAACAGAGGCGGCGTAAGTTTGGCACTGTGGCAAAACTATCCCCTTCAGACATGGATATGCTGAAGTATTTATCTAGCAAGAAGGGTCGTGCCGAGGACAGCCTAGGAAGTGTTGAAGTTGGGAGATTTAGAGAATTCAGCGTGTCTCGTTGGGACCTCCAGTGCCTCAGTCCCACGTGTTCAATTAGCAGCGAGGTGATCAACATCATGGGGGAATACTGTTTTGTGAATCGGGAGGATTGGTGGTTCCTCTCGACTTTATTTTCTGAGCGTGCAAAGGACTACTATGATTCTTATGCGGGAGTGCAGTCGTACGTATCAGCAACCATTAGCATGTGTAGGCTACGCAAATACTGCGGTCGTCTTAAAGCATGTAAAAAGATATTCATCCCTATTCTTGACGACGTTGTGGATCACTGGTTTCTTGTTGTTGCAAACATCACCGAAGGTGAATGTGAGATATGGGACTGCATCCCCGACCTCCCAGCGCAACAACGCCGCAAGAACATGGTTAACAACGTTATGAGTCTGCTGGGAGAAGTTTTTTCTTCTGAACTTGAAGTATCGGATCTAGCTCCATCAGCATTGTCCTCGTACAGTTTCACGTATCCTGAGAGCTCCCGAACTGTTCCTAACAAGTACGACTCTGGTATATTCACTATCAGACATGTCCAGTACTACCGAGAGCGGTGGTTCTCTGTGTTCAACTCTGCTGATGAGAGGATTAGGATCGCACTTGAGATTGTGAACAACCCCATGAACGAGTGCTATAAGAGTGTTTGGGATTCTGTGTGCCGCGAAGAGAATGAGATGAGTGAATGCAAGGAACTACCTGTAACAAGTGGGGACGTAATTGGTGATCACGCAGACCCAGTTATGACAACATCAGGTATGAAGTTGAAGCCTCGTGTTCCACGCCGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

759

Amino Acids

86.55

Weight (kDa)

7.92

Isoelectric Point (pI)

48.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_C48 PF02902 572 - 680 7.5e-10 Ulp1 protease family, C-terminal catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 660
Acc36I ACCTGC 2 cut(s) 590, 1098
AccBSI CCGCTC 1 cut(s) 2041
AccII CGCG 2 cut(s) 399, 2151
AciI CCGC 9 cut(s) 250, 399, 449, 1363, 1652, 1710, 1852, 2041, 2149
AclI AACGTT 1 cut(s) 1872
AclWI GGATC 6 cut(s) 431, 524, 605, 1773, 1929, 2090
AcoI YGGCCR 1 cut(s) 727
AcsI RAATTY 3 cut(s) 52, 150, 1487
AcuI CTGAAG 2 cut(s) 1383, 1436
AcvI CACGTG 1 cut(s) 1530
AfaI GTAC 7 cut(s) 325, 1064, 1255, 1667, 1949, 1994, 2030
AfiI CCNNNNNNNGG 6 cut(s) 24, 100, 382, 736, 1096, 1334
AflIII ACRYGT 3 cut(s) 996, 1529, 2020
AhdI GACNNNNNGTC 1 cut(s) 997
AjuI GAANNNNNNNTTGG 4 cut(s) 222, 254, 1023, 1055
AloI GAACNNNNNNTCC 6 cut(s) 776, 808, 1154, 1186, 1583, 1615
AluBI AGCT 4 cut(s) 185, 706, 1928, 1971
AluI AGCT 4 cut(s) 185, 706, 1928, 1971
Alw21I GWGCWC 1 cut(s) 1973
Alw26I GTCTC 4 cut(s) 98, 1017, 1326, 1503
AlwI GGATC 6 cut(s) 431, 524, 605, 1773, 1929, 2090
AlwNI CAGNNNCTG 1 cut(s) 144
Ama87I CYCGRG 2 cut(s) 946, 954
AoxI GGCC 3 cut(s) 242, 727, 1297
ApeKI GCWGC 2 cut(s) 741, 1542
ApoI RAATTY 3 cut(s) 52, 150, 1487
ArsI GACNNNNNNTTYG 2 cut(s) 527, 559
Asp700I GAANNNNTTC 1 cut(s) 215
AspA2I CCTAGG 1 cut(s) 1456
AspLEI GCGC 2 cut(s) 571, 1843
AspS9I GGNCC 4 cut(s) 242, 1073, 1298, 1507
AsuC2I CCSGG 3 cut(s) 726, 955, 956
AsuHPI GGTGA 6 cut(s) 643, 1138, 1561, 1786, 1814, 2222
AvaI CYCGRG 2 cut(s) 946, 954
AvaII GGWCC 2 cut(s) 1073, 1507
AvrII CCTAGG 1 cut(s) 1456
BaeI ACNNNNGTAYC 4 cut(s) 393, 426, 910, 943
BanII GRGCYC 1 cut(s) 1973
BarI GAAGNNNNNNTAC 2 cut(s) 399, 431
BauI CACGAG 1 cut(s) 2259
BbrPI CACGTG 1 cut(s) 1530
BbsI GAAGAC 1 cut(s) 742
Bbv12I GWGCWC 1 cut(s) 1973
BbvI GCAGC 2 cut(s) 728, 1554
BccI CCATC 4 cut(s) 102, 890, 1304, 1939
BceAI ACGGC 1 cut(s) 2256
BcgI CGANNNNNNTGC 5 cut(s) 30, 983, 1017, 1926, 1960
BciVI GTATCC 2 cut(s) 421, 1971
BclI TGATCA 2 cut(s) 1551, 2212
BcnI CCSGG 3 cut(s) 726, 955, 956
BcoDI GTCTC 4 cut(s) 98, 1017, 1326, 1503
BfaI CTAG 5 cut(s) 1049, 1211, 1428, 1457, 1925
BfmI CTRYAG 2 cut(s) 186, 1026
BfuAI ACCTGC 2 cut(s) 590, 1098
BfuI GTATCC 2 cut(s) 421, 1971
BglI GCCNNNNNGGC 1 cut(s) 250
BisI GCNGC 7 cut(s) 251, 400, 742, 1364, 1543, 1852, 2149
BlnI CCTAGG 1 cut(s) 1456
BlsI GCNGC 7 cut(s) 252, 401, 743, 1365, 1544, 1853, 2150
BmcAI AGTACT 1 cut(s) 2030
Bme1390I CCNGG 3 cut(s) 726, 955, 956
Bme18I GGWCC 2 cut(s) 1073, 1507
BmeRI GACNNNNNGTC 1 cut(s) 997
BmeT110I CYCGRG 2 cut(s) 946, 954
BmgT120I GGNCC 4 cut(s) 242, 1073, 1298, 1507
BmiI GGNNCC 3 cut(s) 952, 1508, 1601
BmrFI CCNGG 3 cut(s) 726, 955, 956
BmrI ACTGGG 2 cut(s) 673, 2219
BmsI GCATC 2 cut(s) 4, 1833
BmuI ACTGGG 2 cut(s) 673, 2219
BpiI GAAGAC 1 cut(s) 742
BplI GAGNNNNNCTC 2 cut(s) 799, 831
BpmI CTGGAG 2 cut(s) 119, 1496
BpuEI CTTGAG 2 cut(s) 907, 2111
BpuMI CCSGG 3 cut(s) 726, 955, 956
BsaAI YACGTR 3 cut(s) 1530, 1669, 1959
BsaBI GATNNNNATC 3 cut(s) 1556, 1739, 2081
BsaI GGTCTC 2 cut(s) 1017, 1326
BsaJI CCNNGG 4 cut(s) 614, 954, 1446, 1456
BsaWI WCCGGW 2 cut(s) 258, 817
BsaXI ACNNNNNCTCC 6 cut(s) 16, 46, 92, 122, 1580, 1610
Bsc4I CCNNNNNNNGG 6 cut(s) 24, 100, 382, 736, 1096, 1334
Bse118I RCCGGY 3 cut(s) 244, 375, 1151
Bse1I ACTGG 6 cut(s) 668, 1292, 1513, 1775, 2026, 2225
Bse3DI GCAATG 3 cut(s) 1011, 1107, 1207
Bse8I GATNNNNATC 3 cut(s) 1556, 1739, 2081
BseDI CCNNGG 4 cut(s) 614, 954, 1446, 1456
BseGI GGATG 7 cut(s) 19, 167, 429, 1168, 1273, 1740, 1824
BseJI GATNNNNATC 3 cut(s) 1556, 1739, 2081
BseLI CCNNNNNNNGG 6 cut(s) 24, 100, 382, 736, 1096, 1334
BseMI GCAATG 3 cut(s) 1011, 1107, 1207
BseMII CTCAG 5 cut(s) 30, 1337, 1534, 1611, 1956
BseNI ACTGG 6 cut(s) 668, 1292, 1513, 1775, 2026, 2225
BseRI GAGGAG 5 cut(s) 37, 116, 520, 667, 1277
BseXI GCAGC 2 cut(s) 728, 1554
BseYI CCCAGC 2 cut(s) 1837, 1885
BsgI GTGCAG 1 cut(s) 1679
Bsh1236I CGCG 2 cut(s) 399, 2151
Bsh1285I CGRYCG 2 cut(s) 939, 1714
BshFI GGCC 3 cut(s) 244, 729, 1299
BsiEI CGRYCG 2 cut(s) 939, 1714
BsiHKAI GWGCWC 1 cut(s) 1973
BsiHKCI CYCGRG 2 cut(s) 946, 954
BsiSI CCGG 7 cut(s) 245, 259, 376, 726, 818, 955, 1152
BsiWI CGTACG 1 cut(s) 1665
BslFI GGGAC 7 cut(s) 178, 797, 984, 1509, 1520, 1832, 2213
BslI CCNNNNNNNGG 6 cut(s) 24, 100, 382, 736, 1096, 1334
BsmAI GTCTC 4 cut(s) 98, 1017, 1326, 1503
BsmBI CGTCTC 1 cut(s) 98
BsmFI GGGAC 7 cut(s) 178, 797, 984, 1509, 1520, 1832, 2213
BsmI GAATGC 1 cut(s) 2177
BsnI GGCC 3 cut(s) 244, 729, 1299
Bso31I GGTCTC 2 cut(s) 1017, 1326
BsoBI CYCGRG 2 cut(s) 946, 954
Bsp1286I GDGCHC 1 cut(s) 1973
Bsp1407I TGTACA 1 cut(s) 1253
BspACI CCGC 9 cut(s) 250, 399, 449, 1363, 1652, 1710, 1852, 2041, 2149
BspANI GGCC 3 cut(s) 244, 729, 1299
BspCNI CTCAG 5 cut(s) 31, 1336, 1533, 1612, 1957
BspFNI CGCG 2 cut(s) 399, 2151
BspHI TCATGA 1 cut(s) 79
BspLI GGNNCC 3 cut(s) 952, 1508, 1601
BspMAI CTGCAG 1 cut(s) 1030
BspMI ACCTGC 2 cut(s) 590, 1098
BspPI GGATC 6 cut(s) 431, 524, 605, 1773, 1929, 2090
BspTNI GGTCTC 2 cut(s) 1017, 1326
BsrBI CCGCTC 1 cut(s) 2041
BsrDI GCAATG 3 cut(s) 1011, 1107, 1207
BsrFI RCCGGY 3 cut(s) 244, 375, 1151
BsrGI TGTACA 1 cut(s) 1253
BsrI ACTGG 6 cut(s) 668, 1292, 1513, 1775, 2026, 2225
BssAI RCCGGY 3 cut(s) 244, 375, 1151
BssECI CCNNGG 4 cut(s) 614, 954, 1446, 1456
BssSI CACGAG 1 cut(s) 2259
BssT1I CCWWGG 2 cut(s) 614, 1456
Bst2BI CACGAG 1 cut(s) 2259
Bst6I CTCTTC 5 cut(s) 62, 864, 908, 1026, 2148
BstAPI GCANNNNNTGC 1 cut(s) 1707
BstAUI TGTACA 1 cut(s) 1253
BstBAI YACGTR 3 cut(s) 1530, 1669, 1959
BstC8I GCNNGC 2 cut(s) 573, 1626
BstDEI CTNAG 6 cut(s) 39, 1156, 1323, 1520, 1620, 1965
BstENI CCTNNNNNAGG 1 cut(s) 1094
BstF5I GGATG 7 cut(s) 19, 167, 429, 1168, 1273, 1740, 1824
BstFNI CGCG 2 cut(s) 399, 2151
BstHHI GCGC 2 cut(s) 571, 1843
BstMAI GTCTC 4 cut(s) 98, 1017, 1326, 1503
BstMCI CGRYCG 2 cut(s) 939, 1714
BstMWI GCNNNNNNNGC 4 cut(s) 182, 250, 1707, 1934
BstNSI RCATGY 4 cut(s) 1000, 1690, 1728, 2024
BstSCI CCNGG 3 cut(s) 724, 953, 954
BstSFI CTRYAG 2 cut(s) 186, 1026
BstSNI TACGTA 1 cut(s) 1669
BstUI CGCG 2 cut(s) 399, 2151
BstV1I GCAGC 2 cut(s) 728, 1554
BstV2I GAAGAC 1 cut(s) 742
BstX2I RGATCY 2 cut(s) 610, 1921
BstYI RGATCY 2 cut(s) 610, 1921
BsuI GTATCC 2 cut(s) 421, 1971
BsuRI GGCC 3 cut(s) 244, 729, 1299
BtsCI GGATG 7 cut(s) 19, 167, 429, 1168, 1273, 1740, 1824
BtsI GCAGTG 2 cut(s) 1023, 1345
BtsIMutI CAGTG 8 cut(s) 1023, 1228, 1237, 1312, 1345, 1377, 1520, 1768
BveI ACCTGC 2 cut(s) 590, 1098
Cac8I GCNNGC 2 cut(s) 573, 1626
CaiI CAGNNNCTG 1 cut(s) 144
CciI TCATGA 1 cut(s) 79
CfoI GCGC 2 cut(s) 571, 1843
Cfr10I RCCGGY 3 cut(s) 244, 375, 1151
Cfr13I GGNCC 4 cut(s) 242, 1073, 1298, 1507
Cfr9I CCCGGG 1 cut(s) 954
CseI GACGC 1 cut(s) 180
Csp6I GTAC 7 cut(s) 324, 1063, 1254, 1666, 1948, 1993, 2029
CspCI CAANNNNNGTGG 2 cut(s) 969, 1004
CviQI GTAC 7 cut(s) 324, 1063, 1254, 1666, 1948, 1993, 2029
DdeI CTNAG 6 cut(s) 39, 1156, 1323, 1520, 1620, 1965
DraI TTTAAA 1 cut(s) 181
DriI GACNNNNNGTC 1 cut(s) 997
EaeI YGGCCR 1 cut(s) 727
Eam1104I CTCTTC 5 cut(s) 62, 864, 908, 1026, 2148
Eam1105I GACNNNNNGTC 1 cut(s) 997
EarI CTCTTC 5 cut(s) 62, 864, 908, 1026, 2148
Ecl136II GAGCTC 1 cut(s) 1971
Eco105I TACGTA 1 cut(s) 1669
Eco130I CCWWGG 2 cut(s) 614, 1456
Eco24I GRGCYC 1 cut(s) 1973
Eco31I GGTCTC 2 cut(s) 1017, 1326
Eco47I GGWCC 2 cut(s) 1073, 1507
Eco53kI GAGCTC 1 cut(s) 1971
Eco57I CTGAAG 2 cut(s) 1383, 1436
Eco72I CACGTG 1 cut(s) 1530
Eco88I CYCGRG 2 cut(s) 946, 954
EcoICRI GAGCTC 1 cut(s) 1971
EcoNI CCTNNNNNAGG 1 cut(s) 1094
EcoO109I RGGNCCY 1 cut(s) 1507
EcoRI GAATTC 2 cut(s) 52, 1487
EcoT14I CCWWGG 2 cut(s) 614, 1456
EcoT38I GRGCYC 1 cut(s) 1973
ErhI CCWWGG 2 cut(s) 614, 1456
Esp3I CGTCTC 1 cut(s) 98
FaqI GGGAC 7 cut(s) 178, 797, 984, 1509, 1520, 1832, 2213
FauI CCCGC 1 cut(s) 1645
FbaI TGATCA 2 cut(s) 1551, 2212
Fnu4HI GCNGC 7 cut(s) 251, 400, 742, 1364, 1543, 1852, 2149
FokI GGATG 7 cut(s) 26, 174, 416, 1175, 1280, 1727, 1811
FriOI GRGCYC 1 cut(s) 1973
Fsp4HI GCNGC 7 cut(s) 251, 400, 742, 1364, 1543, 1852, 2149
FspBI CTAG 5 cut(s) 1049, 1211, 1428, 1457, 1925
GlaI GCGC 2 cut(s) 570, 1842
GluI GCNGC 7 cut(s) 251, 400, 742, 1364, 1543, 1852, 2149
GsaI CCCAGC 2 cut(s) 1841, 1889
GsuI CTGGAG 2 cut(s) 119, 1496
HaeIII GGCC 3 cut(s) 244, 729, 1299
HapII CCGG 7 cut(s) 245, 259, 376, 726, 818, 955, 1152
HgaI GACGC 1 cut(s) 180
HhaI GCGC 2 cut(s) 571, 1843
Hin6I GCGC 2 cut(s) 569, 1841
HinP1I GCGC 2 cut(s) 569, 1841
HincII GTYRAC 1 cut(s) 1867
HindII GTYRAC 1 cut(s) 1867
HinfI GANTC 9 cut(s) 59, 223, 842, 1118, 1582, 1643, 1879, 1997, 2138
HpaI GTTAAC 1 cut(s) 1867
HpaII CCGG 7 cut(s) 245, 259, 376, 726, 818, 955, 1152
HphI GGTGA 6 cut(s) 643, 1138, 1561, 1786, 1814, 2222
Hpy166II GTNNAC 5 cut(s) 136, 991, 1273, 1867, 2101
Hpy188I TCNGA 9 cut(s) 58, 526, 714, 1175, 1402, 1621, 1906, 1921, 2018
Hpy8I GTNNAC 5 cut(s) 136, 991, 1273, 1867, 2101
Hpy99I CGWCG 1 cut(s) 1760
HpyAV CCTTC 7 cut(s) 205, 358, 628, 1187, 1407, 1429, 1793
HpyCH4IV ACGT 8 cut(s) 31, 107, 1529, 1668, 1758, 1872, 1958, 2202
HpyCH4V TGCA 9 cut(s) 47, 288, 1004, 1028, 1628, 1660, 1787, 1824, 2175
HpyF10VI GCNNNNNNNGC 4 cut(s) 182, 250, 1707, 1934
HpyF3I CTNAG 6 cut(s) 39, 1156, 1323, 1520, 1620, 1965
HpySE526I ACGT 8 cut(s) 31, 107, 1529, 1668, 1758, 1872, 1958, 2202
HspAI GCGC 2 cut(s) 569, 1841
Ksp22I TGATCA 2 cut(s) 1551, 2212
KspAI GTTAAC 1 cut(s) 1867
LmnI GCTCC 2 cut(s) 1933, 1976
Lsp1109I GCAGC 2 cut(s) 728, 1554
LweI GCATC 2 cut(s) 4, 1833
MaeI CTAG 5 cut(s) 1049, 1211, 1428, 1457, 1925
MaeII ACGT 8 cut(s) 31, 107, 1529, 1668, 1758, 1872, 1958, 2202
MaeIII GTNAC 5 cut(s) 164, 907, 1110, 1147, 2188
MbiI CCGCTC 1 cut(s) 2041
MboII GAAGA 9 cut(s) 79, 136, 742, 881, 925, 1043, 1363, 1893, 2165
MfeI CAATTG 1 cut(s) 1188
MflI RGATCY 2 cut(s) 610, 1921
MhlI GDGCHC 1 cut(s) 1973
MlyI GAGTC 3 cut(s) 851, 1888, 1991
MmeI TCCRAC 4 cut(s) 279, 672, 1021, 1110
MroXI GAANNNNTTC 1 cut(s) 215
MseI TTAA 6 cut(s) 180, 272, 309, 1332, 1719, 1866
MslI CAYNNNNRTG 2 cut(s) 1409, 1685
MspA1I CMGCKG 1 cut(s) 706
MspI CCGG 7 cut(s) 245, 259, 376, 726, 818, 955, 1152
MspR9I CCNGG 3 cut(s) 726, 955, 956
MunI CAATTG 1 cut(s) 1188
Mva1269I GAATGC 1 cut(s) 2177
MvnI CGCG 2 cut(s) 399, 2151
MwoI GCNNNNNNNGC 4 cut(s) 182, 250, 1707, 1934
NciI CCSGG 3 cut(s) 726, 955, 956
NlaIV GGNNCC 3 cut(s) 952, 1508, 1601
NmeAIII GCCGAG 2 cut(s) 43, 1471
NmuCI GTSAC 2 cut(s) 164, 1147
NspI RCATGY 4 cut(s) 1000, 1690, 1728, 2024
PagI TCATGA 1 cut(s) 79
PciI ACATGT 2 cut(s) 996, 2020
PctI GAATGC 1 cut(s) 2177
PdmI GAANNNNTTC 1 cut(s) 215
PfeI GAWTC 6 cut(s) 59, 223, 1118, 1582, 1643, 2138
Pfl23II CGTACG 1 cut(s) 1665
PkrI GCNGC 7 cut(s) 252, 401, 743, 1365, 1544, 1853, 2150
PleI GAGTC 3 cut(s) 850, 1887, 1991
PmaCI CACGTG 1 cut(s) 1530
PmlI CACGTG 1 cut(s) 1530
PpsI GAGTC 3 cut(s) 850, 1887, 1991
Ppu21I YACGTR 3 cut(s) 1530, 1669, 1959
PpuMI RGGWCCY 1 cut(s) 1507
PscI ACATGT 2 cut(s) 996, 2020
PsiI TTATAA 1 cut(s) 660
Psp124BI GAGCTC 1 cut(s) 1973
Psp1406I AACGTT 1 cut(s) 1872
Psp5II RGGWCCY 1 cut(s) 1507
PspCI CACGTG 1 cut(s) 1530
PspFI CCCAGC 2 cut(s) 1837, 1885
PspLI CGTACG 1 cut(s) 1665
PspN4I GGNNCC 3 cut(s) 952, 1508, 1601
PspPI GGNCC 4 cut(s) 242, 1073, 1298, 1507
PspPPI RGGWCCY 1 cut(s) 1507
PstI CTGCAG 1 cut(s) 1030
PstNI CAGNNNCTG 1 cut(s) 144
PsuI RGATCY 2 cut(s) 610, 1921
PvuII CAGCTG 1 cut(s) 706
RsaI GTAC 7 cut(s) 325, 1064, 1255, 1667, 1949, 1994, 2030
RsaNI GTAC 7 cut(s) 324, 1063, 1254, 1666, 1948, 1993, 2029
RseI CAYNNNNRTG 2 cut(s) 1409, 1685
SacI GAGCTC 1 cut(s) 1973
SaqAI TTAA 6 cut(s) 180, 272, 309, 1332, 1719, 1866
SatI GCNGC 7 cut(s) 251, 400, 742, 1364, 1543, 1852, 2149
Sau96I GGNCC 4 cut(s) 242, 1073, 1298, 1507
ScaI AGTACT 1 cut(s) 2030
SchI GAGTC 3 cut(s) 851, 1888, 1991
ScrFI CCNGG 3 cut(s) 726, 955, 956
SduI GDGCHC 1 cut(s) 1973
SfaNI GCATC 2 cut(s) 4, 1833
SfcI CTRYAG 2 cut(s) 186, 1026
SinI GGWCC 2 cut(s) 1073, 1507
SmaI CCCGGG 1 cut(s) 956
SmiMI CAYNNNNRTG 2 cut(s) 1409, 1685
SmlI CTYRAG 2 cut(s) 922, 2090
SmoI CTYRAG 2 cut(s) 922, 2090
SnaBI TACGTA 1 cut(s) 1669
SsiI CCGC 9 cut(s) 250, 399, 449, 1363, 1652, 1710, 1852, 2041, 2149
SspMI CTAG 5 cut(s) 1049, 1211, 1428, 1457, 1925
SstI GAGCTC 1 cut(s) 1973
StyD4I CCNGG 3 cut(s) 724, 953, 954
StyI CCWWGG 2 cut(s) 614, 1456
TaiI ACGT 8 cut(s) 34, 110, 1532, 1671, 1761, 1875, 1961, 2205
TaqI TCGA 5 cut(s) 203, 845, 935, 1286, 1607
TaqII GACCGA 1 cut(s) 953
TatI WGTACW 2 cut(s) 1253, 2028
TauI GCSGC 5 cut(s) 253, 402, 1366, 1854, 2151
TfiI GAWTC 6 cut(s) 59, 223, 1118, 1582, 1643, 2138
Tru1I TTAA 6 cut(s) 180, 272, 309, 1332, 1719, 1866
Tru9I TTAA 6 cut(s) 180, 272, 309, 1332, 1719, 1866
TscAI CASTG 8 cut(s) 1030, 1228, 1237, 1312, 1345, 1384, 1520, 1775
TseFI GTSAC 2 cut(s) 164, 1147
TseI GCWGC 2 cut(s) 741, 1542
Tsp45I GTSAC 2 cut(s) 164, 1147
TspDTI ATGAA 7 cut(s) 96, 784, 873, 1196, 1729, 2126, 2261
TspGWI ACGGA 1 cut(s) 1172
TspMI CCCGGG 1 cut(s) 954
TspRI CASTG 8 cut(s) 1030, 1228, 1237, 1312, 1345, 1384, 1520, 1775
VpaK11BI GGWCC 2 cut(s) 1073, 1507
XagI CCTNNNNNAGG 1 cut(s) 1094
XapI RAATTY 3 cut(s) 52, 150, 1487
XceI RCATGY 4 cut(s) 1000, 1690, 1728, 2024
XmaI CCCGGG 1 cut(s) 954
XmaJI CCTAGG 1 cut(s) 1456
XmnI GAANNNNTTC 1 cut(s) 215
XspI CTAG 5 cut(s) 1049, 1211, 1428, 1457, 1925
ZrmI AGTACT 1 cut(s) 2030
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.