Rh5BG373800

Glucomannan 4-beta-mannosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Reverse (-)
58895802 .. 58905574
9773 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG373800.1

Sequence Viewer

Length: 2001 bp
ATGGCTGAGAGTACCAAAGTTCTGATACCAGACACATTCCAGGGTGGGAGTAGCTTTGACATTGCAGGCCAAATTGGGCTGATTTGGGAGCTAATCAAAGCGCCATTGATAGTTCCTCTGCTTAGAGTTGGAGTCTATGTCTCACTAGCCATGGTTCTCATGCTCTTTGTAGAGAGGGTCTACATGGGTATTGTCATTGTTTTGGTCAAAATGTTCTGGAAAAAGCCAGAGAAGCGCTACAACTATGAGCCCATTCAGGAGGATTTGGGATTGGGTAGTTCCAATTTCCCAATGGTGCTTGTTCAAATCCCCATGTTCAATGAAAGAGAGGTCTACAAGATCTCCATTGGAGCTGCATGTGGGCTGTCGTGGCCGTCCGATCGTCTTGTGATCCAAGTCCTGGATGATTCAACTGACCCTACAATCAAGAAAATGGTGGAGGCAGAGTGTCAGAGGTGGGCGAGAAAAGGCATAAACATAGTGTACCAAATCAGAGAAACTAGAGGAGGATACAAAGCAGGTGCATTGAAAGAAGGTTTGAAACGAAGCTACGTGAAACACTGTGAGTACGTGGCTATAATGGACGCCGATTTCCGACCCGAGCCAGACTATCTCAGGCGAGCCATCCCTTTCTTGGTTCAGAACCCCGAAATTGCTTTGGTTCAAGCACGTTGGAGATTCGTGAACGCGGACGAGTGCTTGCTGACAAGAATGCAAGAGATGTCATTGGATTACCATTTCACAGTTGAACAAGAAGTTGGGTCAGCAACACATGCCTTCTTTAGCTTCAACGGAACTGCTGGTGTGTTGAGAATTGCTACTATTAATGAGGCAGGTGGGTGGAAAGATCGTTCAACAGTGGAGGATATGGATCTTGCTGTCCGAGCTGGTCTCAGAGGCTGGAAATTTTTGTACCTTGGTGACCTTCAGGTGAAAAGTGAACTTCCTAGTACCTTCAATGACTACCGTAACCAGCAGCACCGATGGTCTTGTGGTCCAGCTAATCTGTTCAGGAAAATTGTCATGGAAATAGCAATGAATGAGAAAGTTACATTGTGGAAGAAATTCTATGTCATCTACAGTTTCTTCTTTGTTAGGAAGATCATTGTCCACATGGTGACTTTCTTCTTTTACTGTGTTGTGCTTCCCCTGACCATTTTTGTTCCTGAAGTTGATGTTCCAATTTGGGGAGCAGTTTATATTCCTTCCATCATTGCCATCCTTAACTCAGTTGGAACTCCAAGGTCAGTTTACCTTTTGTTTTACTGGATCCTTTTCGAGAATGCGATGTCCTTGCACCGGACCAAGGCAACTTTAATCGGCCTATTCGGAGCCGGGAGAGCCAATGAATGGGTTGTCACCGAGAAACTGGGAGATGCTGCCAAGAACAAACCAGCCCCCAAATTCTTCAGGAAACCAAAGTTCAAGTTTGGCAACAGACTGCACATGTTGGAGCTGGGATTTGGATTGTTTCTGTTCTTCTGTGGATGCTACGATTATGAAGTTAAGGGTCGTGTGAGTGCAAAAGAGGATGGCGTTGATGAAGCTGAGGAGGAAAGTAGAGGGGAGAGTACCATGCCGGAGCGGTTTAGGTACTTGACCGAAGAAGCTCCTGACCCTCCTGTGAAGTTGGCATGGTTTCTGGTTTCACAAGGATTCAAGGAGCCCATTTCTACGGTCTGGCTGGAGAGTAGCACATGGCAGTGCTACTATGCTGGTGAATTGGTGCGTTCAGACGAGTCAAGTCCATCGAAAAATCCCAAAAAACGCATGAAGAAATTAGCATCGGCAGTTAATGAGGAAAAGACCGGTGACACTAAAATTATCATAAGAGGTGATTGCCAAGAAGATGGAAAGAATGGAAGCTTCATAACAGTTCTGGTGAAGTTCCCATTATCATTTCAATGGCCGGCCGGGCAAAAGAGTTCAAACAGACTGTTGGAAAGCTGTCAAATGAAAAGGCATGAAGATTCATGGGAGACACTTGATGATCAGCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

666

Amino Acids

76.21

Weight (kDa)

8.29

Isoelectric Point (pI)

40.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_tranf_2_3 PF13641 97 - 332 3.8e-16 Glycosyltransferase like family 2
Glycos_transf_2 PF00535 102 - 251 1e-10 Glycosyl transferase family 2
Glyco_trans_2_3 PF13632 190 - 385 1.9e-24 Glycosyl transferase family group 2
AtTam38 PF25114 513 - 568 2.2e-11 AtTam38 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 509, 824
Acc36I ACCTGC 2 cut(s) 509, 824
AccB7I CCANNNNNTGG 2 cut(s) 400, 1350
AccBSI CCGCTC 1 cut(s) 1585
AccI GTMKAC 2 cut(s) 180, 333
AccII CGCG 1 cut(s) 689
AciI CCGC 2 cut(s) 689, 1585
AclWI GGATC 4 cut(s) 385, 879, 1264, 1277
AcoI YGGCCR 3 cut(s) 371, 1907, 1911
AcsI RAATTY 3 cut(s) 905, 1064, 1403
AcuI CTGAAG 3 cut(s) 911, 1188, 1393
AcyI GRCGYC 1 cut(s) 585
AdeI CACNNNGTG 1 cut(s) 1117
AfaI GTAC 7 cut(s) 13, 485, 569, 914, 952, 1573, 1595
AfeI AGCGCT 1 cut(s) 236
AfiI CCNNNNNNNGG 6 cut(s) 400, 634, 1187, 1299, 1306, 1350
AflIII ACRYGT 1 cut(s) 1446
AgeI ACCGGT 1 cut(s) 1808
AjnI CCWGG 2 cut(s) 39, 399
AjuI GAANNNNNNNTTGG 2 cut(s) 741, 773
AloI GAACNNNNNNTCC 2 cut(s) 835, 867
Alw26I GTCTC 3 cut(s) 145, 896, 1973
AlwI GGATC 4 cut(s) 385, 879, 1264, 1277
AlwNI CAGNNNCTG 1 cut(s) 900
Ama87I CYCGRG 1 cut(s) 599
Aor51HI AGCGCT 1 cut(s) 236
AoxI GGCC 5 cut(s) 67, 371, 1321, 1907, 1911
ApeKI GCWGC 3 cut(s) 353, 976, 1379
ApoI RAATTY 3 cut(s) 905, 1064, 1403
AseI ATTAAT 1 cut(s) 825
AsiGI ACCGGT 1 cut(s) 1808
Asp700I GAANNNNTTC 1 cut(s) 1064
AspLEI GCGC 2 cut(s) 103, 237
AspS9I GGNCC 2 cut(s) 995, 1302
AsuC2I CCSGG 2 cut(s) 1336, 1915
AsuHPI GGTGA 8 cut(s) 932, 943, 1129, 1351, 1730, 1823, 1847, 1894
AvaI CYCGRG 1 cut(s) 599
AvaII GGWCC 2 cut(s) 995, 1302
BamHI GGATCC 1 cut(s) 1269
BanII GRGCYC 2 cut(s) 252, 1668
BbvCI CCTCAGC 1 cut(s) 1548
BbvI GCAGC 3 cut(s) 340, 988, 1366
BccI CCATC 7 cut(s) 632, 978, 1217, 1226, 1526, 1756, 1844
BceAI ACGGC 1 cut(s) 358
BcgI CGANNNNNNTGC 2 cut(s) 1276, 1310
BciT130I CCWGG 2 cut(s) 41, 401
BciVI GTATCC 1 cut(s) 503
BclI TGATCA 1 cut(s) 1990
BcnI CCSGG 2 cut(s) 1336, 1915
BcoDI GTCTC 3 cut(s) 145, 896, 1973
BfaI CTAG 3 cut(s) 146, 501, 948
BfmI CTRYAG 1 cut(s) 1078
BfoI RGCGCY 2 cut(s) 104, 238
BfuAI ACCTGC 2 cut(s) 509, 824
BfuI GTATCC 1 cut(s) 503
BglI GCCNNNNNGGC 1 cut(s) 1915
BglII AGATCT 1 cut(s) 339
BisI GCNGC 3 cut(s) 354, 977, 1380
BlsI GCNGC 3 cut(s) 355, 978, 1381
Bme1390I CCNGG 4 cut(s) 41, 401, 1336, 1915
Bme18I GGWCC 2 cut(s) 995, 1302
BmeT110I CYCGRG 1 cut(s) 599
BmgT120I GGNCC 2 cut(s) 995, 1302
BmiI GGNNCC 3 cut(s) 1271, 1333, 1665
BmrFI CCNGG 4 cut(s) 41, 401, 1336, 1915
BmrI ACTGGG 1 cut(s) 1379
BmsI GCATC 3 cut(s) 1366, 1478, 1793
BmuI ACTGGG 1 cut(s) 1379
BplI GAGNNNNNCTC 2 cut(s) 876, 908
BpmI CTGGAG 1 cut(s) 1706
Bpu10I CCTNAGC 1 cut(s) 1548
BpuMI CCSGG 2 cut(s) 1336, 1915
BsaAI YACGTR 2 cut(s) 553, 571
BsaBI GATNNNNATC 1 cut(s) 870
BsaHI GRCGYC 1 cut(s) 585
BsaI GGTCTC 1 cut(s) 896
BsaJI CCNNGG 5 cut(s) 40, 150, 916, 1241, 1305
BsaWI WCCGGW 2 cut(s) 1299, 1808
BsaXI ACNNNNNCTCC 6 cut(s) 123, 153, 326, 356, 431, 461
Bsc4I CCNNNNNNNGG 6 cut(s) 400, 634, 1187, 1299, 1306, 1350
Bse118I RCCGGY 2 cut(s) 1808, 1909
Bse1I ACTGG 2 cut(s) 1271, 1374
Bse3DI GCAATG 3 cut(s) 60, 1041, 1212
Bse8I GATNNNNATC 1 cut(s) 870
BseBI CCWGG 2 cut(s) 41, 401
BseDI CCNNGG 5 cut(s) 40, 150, 916, 1241, 1305
BseGI GGATG 5 cut(s) 409, 624, 1218, 1493, 1537
BseJI GATNNNNATC 1 cut(s) 870
BseLI CCNNNNNNNGG 6 cut(s) 400, 634, 1187, 1299, 1306, 1350
BseMI GCAATG 3 cut(s) 60, 1041, 1212
BseMII CTCAG 4 cut(s) 628, 907, 1242, 1539
BseNI ACTGG 2 cut(s) 1271, 1374
BseRI GAGGAG 2 cut(s) 519, 1565
BseX3I CGGCCG 1 cut(s) 1911
BseXI GCAGC 3 cut(s) 340, 988, 1366
BseYI CCCAGC 1 cut(s) 1456
BsgI GTGCAG 1 cut(s) 1427
Bsh1236I CGCG 1 cut(s) 689
Bsh1285I CGRYCG 2 cut(s) 382, 1914
BshFI GGCC 5 cut(s) 69, 373, 1323, 1909, 1913
BshTI ACCGGT 1 cut(s) 1808
BsiEI CGRYCG 2 cut(s) 382, 1914
BsiHKCI CYCGRG 1 cut(s) 599
BsiSI CCGG 6 cut(s) 1300, 1335, 1580, 1809, 1910, 1914
BslI CCNNNNNNNGG 6 cut(s) 400, 634, 1187, 1299, 1306, 1350
BsmAI GTCTC 3 cut(s) 145, 896, 1973
BsmI GAATGC 2 cut(s) 717, 1288
BsnI GGCC 5 cut(s) 69, 373, 1323, 1909, 1913
Bso31I GGTCTC 1 cut(s) 896
BsoBI CYCGRG 1 cut(s) 599
Bsp1286I GDGCHC 2 cut(s) 252, 1668
Bsp143I GATC 8 cut(s) 339, 379, 390, 847, 871, 1101, 1269, 1990
Bsp19I CCATGG 1 cut(s) 150
BspACI CCGC 2 cut(s) 689, 1585
BspANI GGCC 5 cut(s) 69, 373, 1323, 1909, 1913
BspCNI CTCAG 4 cut(s) 627, 906, 1241, 1540
BspFNI CGCG 1 cut(s) 689
BspLI GGNNCC 3 cut(s) 1271, 1333, 1665
BspMI ACCTGC 2 cut(s) 509, 824
BspPI GGATC 4 cut(s) 385, 879, 1264, 1277
BspTNI GGTCTC 1 cut(s) 896
BsrBI CCGCTC 1 cut(s) 1585
BsrDI GCAATG 3 cut(s) 60, 1041, 1212
BsrFI RCCGGY 2 cut(s) 1808, 1909
BsrI ACTGG 2 cut(s) 1271, 1374
BssAI RCCGGY 2 cut(s) 1808, 1909
BssECI CCNNGG 5 cut(s) 40, 150, 916, 1241, 1305
BssMI GATC 8 cut(s) 339, 379, 390, 847, 871, 1101, 1269, 1990
BssNI GRCGYC 1 cut(s) 585
BssT1I CCWWGG 4 cut(s) 150, 916, 1241, 1305
Bst2UI CCWGG 2 cut(s) 41, 401
Bst4CI ACNGT 9 cut(s) 563, 745, 859, 968, 1082, 1136, 1678, 1876, 1938
BstACI GRCGYC 1 cut(s) 585
BstAPI GCANNNNNTGC 1 cut(s) 773
BstBAI YACGTR 2 cut(s) 553, 571
BstC8I GCNNGC 4 cut(s) 67, 621, 701, 1911
BstDEI CTNAG 6 cut(s) 6, 122, 614, 893, 1228, 1548
BstDSI CCRYGG 1 cut(s) 150
BstEII GGTNACC 1 cut(s) 920
BstF5I GGATG 5 cut(s) 409, 624, 1218, 1493, 1537
BstFNI CGCG 1 cut(s) 689
BstH2I RGCGCY 2 cut(s) 104, 238
BstHHI GCGC 2 cut(s) 103, 237
BstKTI GATC 8 cut(s) 342, 382, 393, 850, 874, 1104, 1272, 1993
BstMAI GTCTC 3 cut(s) 145, 896, 1973
BstMBI GATC 8 cut(s) 339, 379, 390, 847, 871, 1101, 1269, 1990
BstMCI CGRYCG 2 cut(s) 382, 1914
BstMWI GCNNNNNNNGC 6 cut(s) 232, 370, 773, 884, 1340, 1915
BstNI CCWGG 2 cut(s) 41, 401
BstNSI RCATGY 3 cut(s) 360, 776, 1450
BstPI GGTNACC 1 cut(s) 920
BstSCI CCNGG 4 cut(s) 39, 399, 1334, 1913
BstSFI CTRYAG 1 cut(s) 1078
BstUI CGCG 1 cut(s) 689
BstV1I GCAGC 3 cut(s) 340, 988, 1366
BstX2I RGATCY 3 cut(s) 339, 871, 1269
BstXI CCANNNNNNTGG 1 cut(s) 1850
BstYI RGATCY 3 cut(s) 339, 871, 1269
BstZI CGGCCG 1 cut(s) 1911
BsuI GTATCC 1 cut(s) 503
BsuRI GGCC 5 cut(s) 69, 373, 1323, 1909, 1913
BtgI CCRYGG 1 cut(s) 150
BtgZI GCGATG 1 cut(s) 1301
BtsCI GGATG 5 cut(s) 409, 624, 1218, 1493, 1537
BtsI GCAGTG 1 cut(s) 1709
BtsIMutI CAGTG 3 cut(s) 559, 864, 1709
BveI ACCTGC 2 cut(s) 509, 824
Cac8I GCNNGC 4 cut(s) 67, 621, 701, 1911
CaiI CAGNNNCTG 1 cut(s) 900
CfoI GCGC 2 cut(s) 103, 237
Cfr10I RCCGGY 2 cut(s) 1808, 1909
Cfr13I GGNCC 2 cut(s) 995, 1302
CseI GACGC 1 cut(s) 593
Csp6I GTAC 7 cut(s) 12, 484, 568, 913, 951, 1572, 1594
CspAI ACCGGT 1 cut(s) 1808
CviQI GTAC 7 cut(s) 12, 484, 568, 913, 951, 1572, 1594
DdeI CTNAG 6 cut(s) 6, 122, 614, 893, 1228, 1548
DpnI GATC 8 cut(s) 341, 381, 392, 849, 873, 1103, 1271, 1992
DpnII GATC 8 cut(s) 339, 379, 390, 847, 871, 1101, 1269, 1990
DraIII CACNNNGTG 1 cut(s) 1117
EaeI YGGCCR 3 cut(s) 371, 1907, 1911
EagI CGGCCG 1 cut(s) 1911
EclXI CGGCCG 1 cut(s) 1911
Eco130I CCWWGG 4 cut(s) 150, 916, 1241, 1305
Eco24I GRGCYC 2 cut(s) 252, 1668
Eco31I GGTCTC 1 cut(s) 896
Eco47I GGWCC 2 cut(s) 995, 1302
Eco47III AGCGCT 1 cut(s) 236
Eco52I CGGCCG 1 cut(s) 1911
Eco57I CTGAAG 3 cut(s) 911, 1188, 1393
Eco88I CYCGRG 1 cut(s) 599
Eco91I GGTNACC 1 cut(s) 920
EcoO65I GGTNACC 1 cut(s) 920
EcoRII CCWGG 2 cut(s) 39, 399
EcoT14I CCWWGG 4 cut(s) 150, 916, 1241, 1305
EcoT38I GRGCYC 2 cut(s) 252, 1668
ErhI CCWWGG 4 cut(s) 150, 916, 1241, 1305
FbaI TGATCA 1 cut(s) 1990
FblI GTMKAC 2 cut(s) 180, 333
Fnu4HI GCNGC 3 cut(s) 354, 977, 1380
FokI GGATG 5 cut(s) 416, 611, 1205, 1500, 1544
FriOI GRGCYC 2 cut(s) 252, 1668
FseI GGCCGGCC 1 cut(s) 1913
Fsp4HI GCNGC 3 cut(s) 354, 977, 1380
FspBI CTAG 3 cut(s) 146, 501, 948
GlaI GCGC 2 cut(s) 102, 236
GluI GCNGC 3 cut(s) 354, 977, 1380
GsaI CCCAGC 1 cut(s) 1460
GsuI CTGGAG 1 cut(s) 1706
HaeII RGCGCY 2 cut(s) 104, 238
HaeIII GGCC 5 cut(s) 69, 373, 1323, 1909, 1913
HapII CCGG 6 cut(s) 1300, 1335, 1580, 1809, 1910, 1914
HgaI GACGC 1 cut(s) 593
HhaI GCGC 2 cut(s) 103, 237
Hin1I GRCGYC 1 cut(s) 585
Hin6I GCGC 2 cut(s) 101, 235
HinP1I GCGC 2 cut(s) 101, 235
HindIII AAGCTT 1 cut(s) 1864
HinfI GANTC 6 cut(s) 132, 407, 678, 1656, 1739, 1970
HpaII CCGG 6 cut(s) 1300, 1335, 1580, 1809, 1910, 1914
HphI GGTGA 8 cut(s) 932, 943, 1129, 1351, 1730, 1823, 1847, 1894
Hpy166II GTNNAC 7 cut(s) 181, 334, 484, 685, 941, 1111, 1252
Hpy188III TCNNGA 9 cut(s) 217, 257, 427, 682, 1012, 1166, 1279, 1411, 1613
Hpy8I GTNNAC 7 cut(s) 181, 334, 484, 685, 941, 1111, 1252
HpyAV CCTTC 5 cut(s) 527, 787, 935, 964, 1215
HpyCH4III ACNGT 9 cut(s) 563, 745, 859, 968, 1082, 1136, 1678, 1876, 1938
HpyCH4IV ACGT 3 cut(s) 552, 570, 670
HpyCH4V TGCA 7 cut(s) 65, 356, 524, 715, 1297, 1444, 1523
HpyF10VI GCNNNNNNNGC 6 cut(s) 232, 370, 773, 884, 1340, 1915
HpyF3I CTNAG 6 cut(s) 6, 122, 614, 893, 1228, 1548
HpySE526I ACGT 3 cut(s) 552, 570, 670
Hsp92I GRCGYC 1 cut(s) 585
HspAI GCGC 2 cut(s) 101, 235
KroI GCCGGC 1 cut(s) 1909
KroNI GCCGGC 1 cut(s) 1911
Ksp22I TGATCA 1 cut(s) 1990
Kzo9I GATC 8 cut(s) 339, 379, 390, 847, 871, 1101, 1269, 1990
LmnI GCTCC 8 cut(s) 88, 350, 1190, 1331, 1453, 1582, 1615, 1663
Lsp1109I GCAGC 3 cut(s) 340, 988, 1366
LweI GCATC 3 cut(s) 1366, 1478, 1793
MaeI CTAG 3 cut(s) 146, 501, 948
MaeII ACGT 3 cut(s) 552, 570, 670
MaeIII GTNAC 6 cut(s) 920, 968, 1048, 1117, 1357, 1811
MalI GATC 8 cut(s) 341, 381, 392, 849, 873, 1103, 1271, 1992
MbiI CCGCTC 1 cut(s) 1585
MboI GATC 8 cut(s) 339, 379, 390, 847, 871, 1101, 1269, 1990
MflI RGATCY 3 cut(s) 339, 871, 1269
MhlI GDGCHC 2 cut(s) 252, 1668
MlyI GAGTC 2 cut(s) 141, 1748
MmeI TCCRAC 6 cut(s) 109, 619, 653, 1213, 1431, 1920
MroNI GCCGGC 1 cut(s) 1909
MroXI GAANNNNTTC 1 cut(s) 1064
MseI TTAA 5 cut(s) 825, 1224, 1316, 1506, 1794
MslI CAYNNNNRTG 2 cut(s) 1702, 1903
MspI CCGG 6 cut(s) 1300, 1335, 1580, 1809, 1910, 1914
MspR9I CCNGG 4 cut(s) 41, 401, 1336, 1915
Mva1269I GAATGC 2 cut(s) 717, 1288
MvaI CCWGG 2 cut(s) 41, 401
MvnI CGCG 1 cut(s) 689
MwoI GCNNNNNNNGC 6 cut(s) 232, 370, 773, 884, 1340, 1915
NaeI GCCGGC 1 cut(s) 1911
NciI CCSGG 2 cut(s) 1336, 1915
NcoI CCATGG 1 cut(s) 150
NdeII GATC 8 cut(s) 339, 379, 390, 847, 871, 1101, 1269, 1990
NgoMIV GCCGGC 1 cut(s) 1909
NlaIV GGNNCC 3 cut(s) 1271, 1333, 1665
NmuCI GTSAC 4 cut(s) 920, 1117, 1357, 1811
NspI RCATGY 3 cut(s) 360, 776, 1450
PaqCI CACCTGC 2 cut(s) 509, 824
PciI ACATGT 1 cut(s) 1446
PctI GAATGC 2 cut(s) 717, 1288
PdiI GCCGGC 1 cut(s) 1911
PdmI GAANNNNTTC 1 cut(s) 1064
PfeI GAWTC 4 cut(s) 407, 678, 1656, 1970
PflMI CCANNNNNTGG 2 cut(s) 400, 1350
PfoI TCCNGGA 1 cut(s) 399
PinAI ACCGGT 1 cut(s) 1808
PkrI GCNGC 3 cut(s) 355, 978, 1381
Ple19I CGATCG 1 cut(s) 382
PleI GAGTC 2 cut(s) 140, 1747
PpsI GAGTC 2 cut(s) 140, 1747
Ppu21I YACGTR 2 cut(s) 553, 571
PscI ACATGT 1 cut(s) 1446
PshBI ATTAAT 1 cut(s) 825
Psp6I CCWGG 2 cut(s) 39, 399
PspEI GGTNACC 1 cut(s) 920
PspFI CCCAGC 1 cut(s) 1456
PspGI CCWGG 2 cut(s) 39, 399
PspN4I GGNNCC 3 cut(s) 1271, 1333, 1665
PspPI GGNCC 2 cut(s) 995, 1302
PstNI CAGNNNCTG 1 cut(s) 900
PsuI RGATCY 3 cut(s) 339, 871, 1269
PvuI CGATCG 1 cut(s) 382
RigI GGCCGGCC 1 cut(s) 1913
RsaI GTAC 7 cut(s) 13, 485, 569, 914, 952, 1573, 1595
RsaNI GTAC 7 cut(s) 12, 484, 568, 913, 951, 1572, 1594
RseI CAYNNNNRTG 2 cut(s) 1702, 1903
SaqAI TTAA 5 cut(s) 825, 1224, 1316, 1506, 1794
SatI GCNGC 3 cut(s) 354, 977, 1380
Sau3AI GATC 8 cut(s) 339, 379, 390, 847, 871, 1101, 1269, 1990
Sau96I GGNCC 2 cut(s) 995, 1302
SchI GAGTC 2 cut(s) 141, 1748
ScrFI CCNGG 4 cut(s) 41, 401, 1336, 1915
SduI GDGCHC 2 cut(s) 252, 1668
SfaNI GCATC 3 cut(s) 1366, 1478, 1793
SfcI CTRYAG 1 cut(s) 1078
SinI GGWCC 2 cut(s) 995, 1302
SmiMI CAYNNNNRTG 2 cut(s) 1702, 1903
SsiI CCGC 2 cut(s) 689, 1585
SspMI CTAG 3 cut(s) 146, 501, 948
StyD4I CCNGG 4 cut(s) 39, 399, 1334, 1913
StyI CCWWGG 4 cut(s) 150, 916, 1241, 1305
TaaI ACNGT 9 cut(s) 563, 745, 859, 968, 1082, 1136, 1678, 1876, 1938
TaiI ACGT 3 cut(s) 555, 573, 673
TaqI TCGA 2 cut(s) 1278, 1751
TaqII GACCGA 1 cut(s) 1616
TfiI GAWTC 4 cut(s) 407, 678, 1656, 1970
Tru1I TTAA 5 cut(s) 825, 1224, 1316, 1506, 1794
Tru9I TTAA 5 cut(s) 825, 1224, 1316, 1506, 1794
TscAI CASTG 3 cut(s) 566, 864, 1709
TseFI GTSAC 4 cut(s) 920, 1117, 1357, 1811
TseI GCWGC 3 cut(s) 353, 976, 1379
Tsp45I GTSAC 4 cut(s) 920, 1117, 1357, 1811
TspGWI ACGGA 1 cut(s) 807
TspRI CASTG 3 cut(s) 566, 864, 1709
Van91I CCANNNNNTGG 2 cut(s) 400, 1350
VpaK11BI GGWCC 2 cut(s) 995, 1302
VspI ATTAAT 1 cut(s) 825
XapI RAATTY 3 cut(s) 905, 1064, 1403
XceI RCATGY 3 cut(s) 360, 776, 1450
XcmI CCANNNNNNNNNTGG 2 cut(s) 289, 631
XmiI GTMKAC 2 cut(s) 180, 333
XmnI GAANNNNTTC 1 cut(s) 1064
XspI CTAG 3 cut(s) 146, 501, 948
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.