Ulp1 protease family, C-terminal catalytic domain
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 438 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 237 |
| AccII | CGCG | 1 cut(s) | 477 |
| AciI | CCGC | 1 cut(s) | 475 |
| AclI | AACGTT | 1 cut(s) | 334 |
| AclWI | GGATC | 1 cut(s) | 330 |
| AcuI | CTGAAG | 1 cut(s) | 479 |
| AfaI | GTAC | 2 cut(s) | 64, 183 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 89, 237 |
| AflII | CTTAAG | 1 cut(s) | 377 |
| AgsI | TTSAA | 2 cut(s) | 112, 305 |
| AluBI | AGCT | 4 cut(s) | 78, 115, 392, 398 |
| AluI | AGCT | 4 cut(s) | 78, 115, 392, 398 |
| Alw26I | GTCTC | 1 cut(s) | 341 |
| AlwI | GGATC | 1 cut(s) | 330 |
| AoxI | GGCC | 2 cut(s) | 217, 547 |
| ApeKI | GCWGC | 4 cut(s) | 142, 280, 392, 395 |
| AseI | ATTAAT | 1 cut(s) | 132 |
| AspS9I | GGNCC | 3 cut(s) | 7, 218, 547 |
| AsuC2I | CCSGG | 1 cut(s) | 517 |
| AsuHPI | GGTGA | 2 cut(s) | 49, 535 |
| AsuII | TTCGAA | 2 cut(s) | 559, 568 |
| AvaII | GGWCC | 1 cut(s) | 7 |
| BbvCI | CCTCAGC | 1 cut(s) | 318 |
| BbvI | GCAGC | 4 cut(s) | 154, 292, 379, 407 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 384, 418 |
| BcnI | CCSGG | 1 cut(s) | 517 |
| BcoDI | GTCTC | 1 cut(s) | 341 |
| BfmI | CTRYAG | 1 cut(s) | 393 |
| BfrI | CTTAAG | 1 cut(s) | 377 |
| BisI | GCNGC | 4 cut(s) | 143, 281, 393, 396 |
| BlsI | GCNGC | 4 cut(s) | 144, 282, 394, 397 |
| Bme1390I | CCNGG | 1 cut(s) | 517 |
| Bme18I | GGWCC | 1 cut(s) | 7 |
| BmgT120I | GGNCC | 3 cut(s) | 7, 218, 547 |
| BmiI | GGNNCC | 1 cut(s) | 423 |
| BmrFI | CCNGG | 1 cut(s) | 517 |
| BmsI | GCATC | 2 cut(s) | 345, 480 |
| Bpu10I | CCTNAGC | 1 cut(s) | 318 |
| Bpu14I | TTCGAA | 2 cut(s) | 559, 568 |
| BpuMI | CCSGG | 1 cut(s) | 517 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 89, 237 |
| Bse1I | ACTGG | 2 cut(s) | 29, 242 |
| Bse3DI | GCAATG | 1 cut(s) | 373 |
| BseGI | GGATG | 2 cut(s) | 91, 471 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 89, 237 |
| BseMI | GCAATG | 1 cut(s) | 373 |
| BseMII | CTCAG | 1 cut(s) | 309 |
| BseNI | ACTGG | 2 cut(s) | 29, 242 |
| BseRI | GAGGAG | 1 cut(s) | 589 |
| BseXI | GCAGC | 4 cut(s) | 154, 292, 379, 407 |
| BseYI | CCCAGC | 1 cut(s) | 362 |
| Bsh1236I | CGCG | 1 cut(s) | 477 |
| BshFI | GGCC | 2 cut(s) | 219, 549 |
| BsiSI | CCGG | 2 cut(s) | 83, 516 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 89, 237 |
| BsmAI | GTCTC | 1 cut(s) | 341 |
| BsnI | GGCC | 2 cut(s) | 219, 549 |
| Bsp119I | TTCGAA | 2 cut(s) | 559, 568 |
| Bsp1407I | TGTACA | 1 cut(s) | 181 |
| Bsp143I | GATC | 3 cut(s) | 170, 322, 580 |
| BspACI | CCGC | 1 cut(s) | 475 |
| BspANI | GGCC | 2 cut(s) | 219, 549 |
| BspCNI | CTCAG | 1 cut(s) | 310 |
| BspFNI | CGCG | 1 cut(s) | 477 |
| BspLI | GGNNCC | 1 cut(s) | 423 |
| BspMAI | CTGCAG | 1 cut(s) | 397 |
| BspPI | GGATC | 1 cut(s) | 330 |
| BspT104I | TTCGAA | 2 cut(s) | 559, 568 |
| BspTI | CTTAAG | 1 cut(s) | 377 |
| BsrDI | GCAATG | 1 cut(s) | 373 |
| BsrGI | TGTACA | 1 cut(s) | 181 |
| BsrI | ACTGG | 2 cut(s) | 29, 242 |
| BssMI | GATC | 3 cut(s) | 170, 322, 580 |
| Bst4CI | ACNGT | 1 cut(s) | 352 |
| Bst6I | CTCTTC | 1 cut(s) | 300 |
| BstAFI | CTTAAG | 1 cut(s) | 377 |
| BstAUI | TGTACA | 1 cut(s) | 181 |
| BstBI | TTCGAA | 2 cut(s) | 559, 568 |
| BstC8I | GCNNGC | 2 cut(s) | 80, 117 |
| BstDEI | CTNAG | 1 cut(s) | 318 |
| BstF5I | GGATG | 2 cut(s) | 91, 471 |
| BstFNI | CGCG | 1 cut(s) | 477 |
| BstKTI | GATC | 3 cut(s) | 173, 325, 583 |
| BstMAI | GTCTC | 1 cut(s) | 341 |
| BstMBI | GATC | 3 cut(s) | 170, 322, 580 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 112 |
| BstNSI | RCATGY | 1 cut(s) | 17 |
| BstSCI | CCNGG | 1 cut(s) | 515 |
| BstSFI | CTRYAG | 1 cut(s) | 393 |
| BstUI | CGCG | 1 cut(s) | 477 |
| BstV1I | GCAGC | 4 cut(s) | 154, 292, 379, 407 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 17 |
| BsuRI | GGCC | 2 cut(s) | 219, 549 |
| BtgZI | GCGATG | 1 cut(s) | 492 |
| BtsCI | GGATG | 2 cut(s) | 91, 471 |
| BtsIMutI | CAGTG | 2 cut(s) | 22, 235 |
| Cac8I | GCNNGC | 2 cut(s) | 80, 117 |
| Cfr13I | GGNCC | 3 cut(s) | 7, 218, 547 |
| Csp6I | GTAC | 2 cut(s) | 63, 182 |
| CviAII | CATG | 3 cut(s) | 14, 464, 584 |
| CviJI | RGCY | 7 cut(s) | 78, 115, 219, 392, 398, 549, 564 |
| CviKI_1 | RGCY | 7 cut(s) | 78, 115, 219, 392, 398, 549, 564 |
| CviQI | GTAC | 2 cut(s) | 63, 182 |
| DdeI | CTNAG | 1 cut(s) | 318 |
| DpnI | GATC | 3 cut(s) | 172, 324, 582 |
| DpnII | GATC | 3 cut(s) | 170, 322, 580 |
| Eam1104I | CTCTTC | 1 cut(s) | 300 |
| EarI | CTCTTC | 1 cut(s) | 300 |
| Eco47I | GGWCC | 1 cut(s) | 7 |
| Eco57I | CTGAAG | 1 cut(s) | 479 |
| FaeI | CATG | 3 cut(s) | 17, 467, 587 |
| FatI | CATG | 3 cut(s) | 13, 463, 583 |
| FauNDI | CATATG | 1 cut(s) | 276 |
| Fnu4HI | GCNGC | 4 cut(s) | 143, 281, 393, 396 |
| FokI | GGATG | 2 cut(s) | 98, 458 |
| Fsp4HI | GCNGC | 4 cut(s) | 143, 281, 393, 396 |
| GluI | GCNGC | 4 cut(s) | 143, 281, 393, 396 |
| GsaI | CCCAGC | 1 cut(s) | 366 |
| HaeIII | GGCC | 2 cut(s) | 219, 549 |
| HapII | CCGG | 2 cut(s) | 83, 516 |
| Hin1II | CATG | 3 cut(s) | 17, 467, 587 |
| HinfI | GANTC | 2 cut(s) | 401, 529 |
| HpaII | CCGG | 2 cut(s) | 83, 516 |
| HphI | GGTGA | 2 cut(s) | 49, 535 |
| Hpy188I | TCNGA | 2 cut(s) | 498, 543 |
| Hpy99I | CGWCG | 1 cut(s) | 547 |
| HpyAV | CCTTC | 2 cut(s) | 514, 575 |
| HpyCH4III | ACNGT | 1 cut(s) | 352 |
| HpyCH4IV | ACGT | 3 cut(s) | 264, 271, 334 |
| HpyCH4V | TGCA | 6 cut(s) | 142, 280, 342, 358, 395, 411 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 112 |
| HpyF3I | CTNAG | 1 cut(s) | 318 |
| HpySE526I | ACGT | 3 cut(s) | 264, 271, 334 |
| Hsp92II | CATG | 3 cut(s) | 17, 467, 587 |
| Kzo9I | GATC | 3 cut(s) | 170, 322, 580 |
| LpnPI | CCDG | 8 cut(s) | 3, 10, 65, 96, 101, 223, 376, 529 |
| Lsp1109I | GCAGC | 4 cut(s) | 154, 292, 379, 407 |
| LweI | GCATC | 2 cut(s) | 345, 480 |
| MaeII | ACGT | 3 cut(s) | 264, 271, 334 |
| MalI | GATC | 3 cut(s) | 172, 324, 582 |
| MboI | GATC | 3 cut(s) | 170, 322, 580 |
| MboII | GAAGA | 1 cut(s) | 317 |
| MluCI | AATT | 3 cut(s) | 133, 295, 503 |
| MmeI | TCCRAC | 2 cut(s) | 70, 566 |
| MnlI | CCTC | 7 cut(s) | 53, 86, 204, 208, 313, 519, 567 |
| MseI | TTAA | 3 cut(s) | 132, 378, 387 |
| MslI | CAYNNNNRTG | 1 cut(s) | 462 |
| MspA1I | CMGCKG | 1 cut(s) | 398 |
| MspCI | CTTAAG | 1 cut(s) | 377 |
| MspI | CCGG | 2 cut(s) | 83, 516 |
| MspR9I | CCNGG | 1 cut(s) | 517 |
| MvnI | CGCG | 1 cut(s) | 477 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 112 |
| NciI | CCSGG | 1 cut(s) | 517 |
| NdeI | CATATG | 1 cut(s) | 276 |
| NdeII | GATC | 3 cut(s) | 170, 322, 580 |
| NlaIII | CATG | 3 cut(s) | 17, 467, 587 |
| NlaIV | GGNNCC | 1 cut(s) | 423 |
| NspI | RCATGY | 1 cut(s) | 17 |
| NspV | TTCGAA | 2 cut(s) | 559, 568 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 565 |
| PfeI | GAWTC | 2 cut(s) | 401, 529 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 237 |
| PkrI | GCNGC | 4 cut(s) | 144, 282, 394, 397 |
| PshBI | ATTAAT | 1 cut(s) | 132 |
| PsiI | TTATAA | 1 cut(s) | 438 |
| Psp1406I | AACGTT | 1 cut(s) | 334 |
| PspFI | CCCAGC | 1 cut(s) | 362 |
| PspN4I | GGNNCC | 1 cut(s) | 423 |
| PspPI | GGNCC | 3 cut(s) | 7, 218, 547 |
| PstI | CTGCAG | 1 cut(s) | 397 |
| PvuII | CAGCTG | 1 cut(s) | 398 |
| RsaI | GTAC | 2 cut(s) | 64, 183 |
| RsaNI | GTAC | 2 cut(s) | 63, 182 |
| RseI | CAYNNNNRTG | 1 cut(s) | 462 |
| SaqAI | TTAA | 3 cut(s) | 132, 378, 387 |
| SatI | GCNGC | 4 cut(s) | 143, 281, 393, 396 |
| Sau3AI | GATC | 3 cut(s) | 170, 322, 580 |
| Sau96I | GGNCC | 3 cut(s) | 7, 218, 547 |
| ScrFI | CCNGG | 1 cut(s) | 517 |
| SfaNI | GCATC | 2 cut(s) | 345, 480 |
| SfcI | CTRYAG | 1 cut(s) | 393 |
| SfuI | TTCGAA | 2 cut(s) | 559, 568 |
| SinI | GGWCC | 1 cut(s) | 7 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 462 |
| SmlI | CTYRAG | 1 cut(s) | 377 |
| SmoI | CTYRAG | 1 cut(s) | 377 |
| Sse9I | AATT | 3 cut(s) | 133, 295, 503 |
| SsiI | CCGC | 1 cut(s) | 475 |
| StyD4I | CCNGG | 1 cut(s) | 515 |
| TaaI | ACNGT | 1 cut(s) | 352 |
| TaiI | ACGT | 3 cut(s) | 267, 274, 337 |
| TaqI | TCGA | 2 cut(s) | 559, 568 |
| TasI | AATT | 3 cut(s) | 133, 295, 503 |
| TatI | WGTACW | 1 cut(s) | 181 |
| TfiI | GAWTC | 2 cut(s) | 401, 529 |
| Tru1I | TTAA | 3 cut(s) | 132, 378, 387 |
| Tru9I | TTAA | 3 cut(s) | 132, 378, 387 |
| TscAI | CASTG | 2 cut(s) | 29, 242 |
| TseI | GCWGC | 4 cut(s) | 142, 280, 392, 395 |
| TspDTI | ATGAA | 4 cut(s) | 56, 264, 384, 480 |
| TspRI | CASTG | 2 cut(s) | 29, 242 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 237 |
| Vha464I | CTTAAG | 1 cut(s) | 377 |
| VpaK11BI | GGWCC | 1 cut(s) | 7 |
| VspI | ATTAAT | 1 cut(s) | 132 |
| XceI | RCATGY | 1 cut(s) | 17 |