FvH4_4g03350

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000030
Physical Location & Seq
Reverse (-)
3020243 .. 3029603
9361 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g03350.t1

Sequence Viewer

Length: 1863 bp
ATGACAGATCACACTTCAATTCAGAAACGAGTCTGCAACTCACCCATCACACCACCAAAACCATCTCATCCTCCATCGACGACGATTGATCGCCGCCCCGCTCCAGACCGGAACCACGGCCACTGCGATCTCGCTCCACTACCAAACCGCCGCCCCATATGCAACCACCCACACAAGCCAAGAAGACCCACCGAGGAAGCCTCCAAACGTCTGCCTCAAACCACCAGACTCGCTCACAAACCATGCATCCCGTCCGGCCGCCCCAAACGAACGTTGACAGGGCCAGAGGCCATCCCCAACTACGCGCTTGCATGCTCCTGGAAGAAAAAAGTGAGATCTTCCTTTCTGTTCGGCGACGAGCTCTTTCACCGTCGTCGAACGGGTCTAGTTGCCTCCTTGTTGGGCTGGGTTGGCGTGCGGTTCCTCGATCAATCTTCTCAATTGGTGATTGTGGCGTCGATGTGTGAGGTGAGGAGTGGGAGAGATCCGTGGCGAAGGATGATTAAGACTTTACTGTCAGGCATGGCGATTGTGGCTGGGTTGGCGTGCAGTTCCTCGATCAATCTTCTCTACTGTCAGGCATGGCGACATTGCCATCGTGGCGTGGAGGACGGTGGATCCTTGGCGAGGCATACTCCAATATGGGGGCTTTCTAGTCTGGTGAGGTGGTATTTGTGGATCCGAGTGGCGTCAAGCTGCTCTGGTCTTGAGACGCTTTTAATTTGGATCTGGTTCTCTCTAGGTTGGATATGGCAAGGTCATGGTGGCGTATTCCAGCGTGCGCTTGACGACAGCATGTGTGTAGAGGTGGTTTGGCGTTTTCGGCGAGGCGGGGTAGCGGTGACCATTGCATGGTTGGCGGCAATGATTTCTCCTCTCTCCTTGGAAGCAAGCGCGGCGACGATCACGAATCGCGGTTCCGAAGCCAAAACAGTGGACGGGCTTTCAAATATACAACCCCTAATTCAGATCCGTTGCGTCGAGAATTCAGAAAAGAGGTTATCATCCATGGACGATAAGGATGCCGAGAGGAGGAAACGTGAGCCTGAGTATGCAAGGAATTCTGAATCAACGAAGAGAGCCTGTCATGAAGTAGTTTTCCATCTGGAGGAGACGCATATTGAAAAGAGGAAGAATGATGTGGACAGAGGCTGTGGAATTTCAACAGGATGTGACCCGAAAGCGTTTAAAGCTGTAGCGTCCCGAATATCGAATGAGAAGGTATTCCTGATTCAAGAATTGGGATTTGGGCCGGTGCGGCAGTTCCGGTGTAGTGAGTTAAATCTGTCGCTATGCAAAATGTTGTTGGACAATTTTAATGTTGAAAAATGTACGATCAAGATACACGGGCGAAACCTGACAGTTATGGAGAAGGACTTTGACCGGCTAATGGGATTGAGGTGTCGCGGCACAGAAGTATCCCTACCAAAGAGGGTCATCCATGATCCAGAAGTAGCGGATTTACAAGAAGAGAAAGTTGGAGTTCTAGCGAATACCATGTACCGTATTGGTCCAGATATATCCAACCTGCGAGAGGCAATGACATTGTTACATGATTCAATGGTGAAGTTGAAGTCAGGAGATGTGACCGGCTTAGTGGATGAGGTGTTCAGAGCAGTCCGTTCAATTGAAGGTGGCAATGTTCATCCAGGGGAGGGGGAGGATGTGAACGCCCATATCTCGAAACCAGTCGGCCCTAACAGTGATGGTAAAGGGTCTCAGCCCTTTAATGGCAGTGGGGAGGCGAAGAAACAGAGGCGGCGTAAGTTTGGCACTGTGGCAAAACTATCCCCTTCAGACATGGATATGCTGAAGTATTTATCTAGCAAGAAGGGTCATGCCGAGGACAGCCTAGGAAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

621

Amino Acids

69.26

Weight (kDa)

9.5

Isoelectric Point (pI)

52.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 514
Acc36I ACCTGC 1 cut(s) 1536
AccB7I CCANNNNNTGG 1 cut(s) 852
AccBSI CCGCTC 1 cut(s) 101
AccII CGCG 4 cut(s) 305, 896, 915, 1407
AclI AACGTT 1 cut(s) 272
AclWI GGATC 8 cut(s) 479, 612, 625, 673, 686, 734, 964, 1439
AcoI YGGCCR 2 cut(s) 118, 256
AcsI RAATTY 3 cut(s) 985, 1060, 1158
AcuI CTGAAG 2 cut(s) 1779, 1832
AcyI GRCGYC 2 cut(s) 455, 689
AfaI GTAC 2 cut(s) 1333, 1502
AfiI CCNNNNNNNGG 9 cut(s) 627, 644, 852, 1032, 1108, 1390, 1534, 1655, 1730
AjnI CCWGG 2 cut(s) 317, 1648
AjuI GAANNNNNNNTTGG 4 cut(s) 1230, 1262, 1461, 1493
AloI GAACNNNNNNTCC 2 cut(s) 1592, 1624
AluBI AGCT 3 cut(s) 361, 696, 1193
AluI AGCT 3 cut(s) 361, 696, 1193
Alw21I GWGCWC 1 cut(s) 363
Alw26I GTCTC 3 cut(s) 704, 1106, 1722
AlwI GGATC 8 cut(s) 479, 612, 625, 673, 686, 734, 964, 1439
AlwNI CAGNNNCTG 1 cut(s) 1152
AoxI GGCC 6 cut(s) 118, 256, 281, 288, 1250, 1693
ApeKI GCWGC 1 cut(s) 696
ApoI RAATTY 3 cut(s) 985, 1060, 1158
Asp700I GAANNNNTTC 1 cut(s) 1223
AspA2I CCTAGG 1 cut(s) 1852
AspLEI GCGC 3 cut(s) 307, 784, 896
AspS9I GGNCC 4 cut(s) 281, 1250, 1511, 1694
AsuHPI GGTGA 7 cut(s) 33, 359, 457, 481, 673, 853, 1576
AvaII GGWCC 1 cut(s) 1511
AvrII CCTAGG 1 cut(s) 1852
BaeI ACNNNNGTAYC 2 cut(s) 1401, 1434
BamHI GGATCC 2 cut(s) 617, 678
BanII GRGCYC 1 cut(s) 363
BarI GAAGNNNNNNTAC 2 cut(s) 1407, 1439
BbsI GAAGAC 1 cut(s) 190
Bbv12I GWGCWC 1 cut(s) 363
BbvI GCAGC 1 cut(s) 683
BccI CCATC 7 cut(s) 53, 70, 82, 299, 603, 1110, 1700
BceAI ACGGC 1 cut(s) 133
BcgI CGANNNNNNTGC 2 cut(s) 1004, 1038
BciT130I CCWGG 2 cut(s) 319, 1650
BciVI GTATCC 1 cut(s) 1429
BcoDI GTCTC 3 cut(s) 704, 1106, 1722
BfaI CTAG 6 cut(s) 386, 654, 740, 1487, 1824, 1853
BfmI CTRYAG 1 cut(s) 1194
BfuAI ACCTGC 1 cut(s) 1536
BfuI GTATCC 1 cut(s) 1429
BglI GCCNNNNNGGC 2 cut(s) 600, 1258
BglII AGATCT 1 cut(s) 335
BisI GCNGC 9 cut(s) 94, 151, 259, 697, 861, 897, 1259, 1408, 1760
BlnI CCTAGG 1 cut(s) 1852
BlsI GCNGC 9 cut(s) 95, 152, 260, 698, 862, 898, 1260, 1409, 1761
Bme1390I CCNGG 2 cut(s) 319, 1650
Bme18I GGWCC 1 cut(s) 1511
BmgT120I GGNCC 4 cut(s) 281, 1250, 1511, 1694
BmiI GGNNCC 5 cut(s) 113, 422, 619, 680, 919
BmrFI CCNGG 2 cut(s) 319, 1650
BmsI GCATC 2 cut(s) 255, 1012
BpiI GAAGAC 1 cut(s) 190
BplI GAGNNNNNCTC 4 cut(s) 185, 217, 619, 651
BpmI CTGGAG 2 cut(s) 87, 1127
BpuEI CTTGAG 1 cut(s) 728
BsaHI GRCGYC 2 cut(s) 455, 689
BsaI GGTCTC 1 cut(s) 1722
BsaJI CCNNGG 9 cut(s) 115, 192, 488, 621, 882, 1008, 1649, 1842, 1852
BsaWI WCCGGW 2 cut(s) 108, 1266
BsaXI ACNNNNNCTCC 2 cut(s) 1024, 1054
Bsc4I CCNNNNNNNGG 9 cut(s) 627, 644, 852, 1032, 1108, 1390, 1534, 1655, 1730
Bse118I RCCGGY 3 cut(s) 1252, 1383, 1589
Bse1I ACTGG 1 cut(s) 1688
Bse3DI GCAATG 5 cut(s) 589, 846, 870, 1545, 1645
BseBI CCWGG 2 cut(s) 319, 1650
BseDI CCNNGG 9 cut(s) 115, 192, 488, 621, 882, 1008, 1649, 1842, 1852
BseLI CCNNNNNNNGG 9 cut(s) 627, 644, 852, 1032, 1108, 1390, 1534, 1655, 1730
BseMI GCAATG 5 cut(s) 589, 846, 870, 1545, 1645
BseMII CTCAG 2 cut(s) 1038, 1733
BseNI ACTGG 1 cut(s) 1688
BseRI GAGGAG 4 cut(s) 487, 864, 1045, 1124
BseX3I CGGCCG 1 cut(s) 256
BseXI GCAGC 1 cut(s) 683
BseYI CCCAGC 2 cut(s) 405, 536
BsgI GTGCAG 1 cut(s) 568
Bsh1236I CGCG 4 cut(s) 305, 896, 915, 1407
Bsh1285I CGRYCG 1 cut(s) 259
BshFI GGCC 6 cut(s) 120, 258, 283, 290, 1252, 1695
BsiEI CGRYCG 1 cut(s) 259
BsiHKAI GWGCWC 1 cut(s) 363
BsiSI CCGG 6 cut(s) 109, 255, 1253, 1267, 1384, 1590
BslFI GGGAC 1 cut(s) 1186
BslI CCNNNNNNNGG 9 cut(s) 627, 644, 852, 1032, 1108, 1390, 1534, 1655, 1730
BsmAI GTCTC 3 cut(s) 704, 1106, 1722
BsmBI CGTCTC 2 cut(s) 704, 1106
BsmFI GGGAC 1 cut(s) 1186
BsnI GGCC 6 cut(s) 120, 258, 283, 290, 1252, 1695
Bso31I GGTCTC 1 cut(s) 1722
Bsp1286I GDGCHC 1 cut(s) 363
Bsp19I CCATGG 1 cut(s) 1008
BspANI GGCC 6 cut(s) 120, 258, 283, 290, 1252, 1695
BspCNI CTCAG 2 cut(s) 1039, 1732
BspFNI CGCG 4 cut(s) 305, 896, 915, 1407
BspHI TCATGA 1 cut(s) 1087
BspLI GGNNCC 5 cut(s) 113, 422, 619, 680, 919
BspMI ACCTGC 1 cut(s) 1536
BspPI GGATC 8 cut(s) 479, 612, 625, 673, 686, 734, 964, 1439
BspTNI GGTCTC 1 cut(s) 1722
BsrBI CCGCTC 1 cut(s) 101
BsrDI GCAATG 5 cut(s) 589, 846, 870, 1545, 1645
BsrFI RCCGGY 3 cut(s) 1252, 1383, 1589
BsrI ACTGG 1 cut(s) 1688
BssAI RCCGGY 3 cut(s) 1252, 1383, 1589
BssECI CCNNGG 9 cut(s) 115, 192, 488, 621, 882, 1008, 1649, 1842, 1852
BssNI GRCGYC 2 cut(s) 455, 689
BssT1I CCWWGG 4 cut(s) 621, 882, 1008, 1852
Bst2UI CCWGG 2 cut(s) 319, 1650
Bst4CI ACNGT 9 cut(s) 371, 516, 575, 614, 934, 1363, 1505, 1703, 1777
Bst6I CTCTTC 2 cut(s) 1070, 1464
BstACI GRCGYC 2 cut(s) 455, 689
BstC8I GCNNGC 6 cut(s) 309, 313, 416, 547, 780, 892
BstDEI CTNAG 3 cut(s) 1047, 1594, 1719
BstDSI CCRYGG 3 cut(s) 115, 488, 1008
BstEII GGTNACC 1 cut(s) 841
BstENI CCTNNNNNAGG 2 cut(s) 625, 1532
BstFNI CGCG 4 cut(s) 305, 896, 915, 1407
BstHHI GCGC 3 cut(s) 307, 784, 896
BstMAI GTCTC 3 cut(s) 704, 1106, 1722
BstMCI CGRYCG 1 cut(s) 259
BstNI CCWGG 2 cut(s) 319, 1650
BstNSI RCATGY 2 cut(s) 315, 799
BstPI GGTNACC 1 cut(s) 841
BstSCI CCNGG 2 cut(s) 317, 1648
BstSFI CTRYAG 1 cut(s) 1194
BstUI CGCG 4 cut(s) 305, 896, 915, 1407
BstV1I GCAGC 1 cut(s) 683
BstV2I GAAGAC 1 cut(s) 190
BstX2I RGATCY 6 cut(s) 335, 484, 617, 678, 726, 969
BstXI CCANNNNNNTGG 1 cut(s) 934
BstYI RGATCY 6 cut(s) 335, 484, 617, 678, 726, 969
BstZI CGGCCG 1 cut(s) 256
BsuI GTATCC 1 cut(s) 1429
BsuRI GGCC 6 cut(s) 120, 258, 283, 290, 1252, 1695
BtgI CCRYGG 3 cut(s) 115, 488, 1008
BtsI GCAGTG 2 cut(s) 121, 1741
BtsIMutI CAGTG 5 cut(s) 121, 939, 1708, 1741, 1773
BveI ACCTGC 1 cut(s) 1536
Cac8I GCNNGC 6 cut(s) 309, 313, 416, 547, 780, 892
CaiI CAGNNNCTG 1 cut(s) 1152
CciI TCATGA 1 cut(s) 1087
CfoI GCGC 3 cut(s) 307, 784, 896
Cfr10I RCCGGY 3 cut(s) 1252, 1383, 1589
Cfr13I GGNCC 4 cut(s) 281, 1250, 1511, 1694
CseI GACGC 6 cut(s) 444, 678, 721, 967, 1123, 1188
Csp6I GTAC 2 cut(s) 1332, 1501
CviQI GTAC 2 cut(s) 1332, 1501
DdeI CTNAG 3 cut(s) 1047, 1594, 1719
DraI TTTAAA 1 cut(s) 1189
DrdI GACNNNNNNGTC 1 cut(s) 514
DseDI GACNNNNNNGTC 1 cut(s) 514
EaeI YGGCCR 2 cut(s) 118, 256
EagI CGGCCG 1 cut(s) 256
Eam1104I CTCTTC 2 cut(s) 1070, 1464
EarI CTCTTC 2 cut(s) 1070, 1464
Ecl136II GAGCTC 1 cut(s) 361
EclXI CGGCCG 1 cut(s) 256
Eco130I CCWWGG 4 cut(s) 621, 882, 1008, 1852
Eco24I GRGCYC 1 cut(s) 363
Eco31I GGTCTC 1 cut(s) 1722
Eco47I GGWCC 1 cut(s) 1511
Eco52I CGGCCG 1 cut(s) 256
Eco53kI GAGCTC 1 cut(s) 361
Eco57I CTGAAG 2 cut(s) 1779, 1832
Eco91I GGTNACC 1 cut(s) 841
EcoICRI GAGCTC 1 cut(s) 361
EcoNI CCTNNNNNAGG 2 cut(s) 625, 1532
EcoO65I GGTNACC 1 cut(s) 841
EcoRI GAATTC 2 cut(s) 985, 1060
EcoRII CCWGG 2 cut(s) 317, 1648
EcoT14I CCWWGG 4 cut(s) 621, 882, 1008, 1852
EcoT22I ATGCAT 1 cut(s) 248
EcoT38I GRGCYC 1 cut(s) 363
ErhI CCWWGG 4 cut(s) 621, 882, 1008, 1852
Esp3I CGTCTC 2 cut(s) 704, 1106
FaqI GGGAC 1 cut(s) 1186
FauI CCCGC 2 cut(s) 106, 824
FauNDI CATATG 1 cut(s) 158
Fnu4HI GCNGC 9 cut(s) 94, 151, 259, 697, 861, 897, 1259, 1408, 1760
FriOI GRGCYC 1 cut(s) 363
Fsp4HI GCNGC 9 cut(s) 94, 151, 259, 697, 861, 897, 1259, 1408, 1760
FspBI CTAG 6 cut(s) 386, 654, 740, 1487, 1824, 1853
GlaI GCGC 3 cut(s) 306, 783, 895
GluI GCNGC 9 cut(s) 94, 151, 259, 697, 861, 897, 1259, 1408, 1760
GsaI CCCAGC 2 cut(s) 409, 540
GsuI CTGGAG 2 cut(s) 87, 1127
HaeIII GGCC 6 cut(s) 120, 258, 283, 290, 1252, 1695
HapII CCGG 6 cut(s) 109, 255, 1253, 1267, 1384, 1590
HgaI GACGC 6 cut(s) 444, 678, 721, 967, 1123, 1188
HhaI GCGC 3 cut(s) 307, 784, 896
Hin1I GRCGYC 2 cut(s) 455, 689
Hin6I GCGC 3 cut(s) 305, 782, 894
HinP1I GCGC 3 cut(s) 305, 782, 894
HincII GTYRAC 1 cut(s) 276
HindII GTYRAC 1 cut(s) 276
HinfI GANTC 6 cut(s) 30, 228, 910, 1067, 1231, 1556
HpaII CCGG 6 cut(s) 109, 255, 1253, 1267, 1384, 1590
HphI GGTGA 7 cut(s) 33, 359, 457, 481, 673, 853, 1576
Hpy166II GTNNAC 4 cut(s) 276, 937, 1144, 1669
Hpy188I TCNGA 8 cut(s) 24, 683, 922, 969, 991, 1066, 1613, 1798
Hpy8I GTNNAC 4 cut(s) 276, 937, 1144, 1669
Hpy99I CGWCG 8 cut(s) 82, 85, 359, 375, 378, 460, 904, 983
HpyAV CCTTC 7 cut(s) 489, 1213, 1366, 1625, 1803, 1825, 1851
HpyCH4III ACNGT 9 cut(s) 371, 516, 575, 614, 934, 1363, 1505, 1703, 1777
HpyCH4IV ACGT 3 cut(s) 208, 272, 1039
HpyCH4V TGCA 8 cut(s) 36, 162, 246, 311, 549, 851, 1055, 1296
HpyF3I CTNAG 3 cut(s) 1047, 1594, 1719
HpySE526I ACGT 3 cut(s) 208, 272, 1039
Hsp92I GRCGYC 2 cut(s) 455, 689
HspAI GCGC 3 cut(s) 305, 782, 894
LmnI GCTCC 3 cut(s) 106, 139, 320
Lsp1109I GCAGC 1 cut(s) 683
LweI GCATC 2 cut(s) 255, 1012
MaeI CTAG 6 cut(s) 386, 654, 740, 1487, 1824, 1853
MaeII ACGT 3 cut(s) 208, 272, 1039
MaeIII GTNAC 4 cut(s) 841, 1172, 1548, 1585
MbiI CCGCTC 1 cut(s) 101
MboII GAAGA 9 cut(s) 195, 330, 334, 426, 557, 1087, 1144, 1481, 1759
MfeI CAATTG 2 cut(s) 440, 1626
MflI RGATCY 6 cut(s) 335, 484, 617, 678, 726, 969
MhlI GDGCHC 1 cut(s) 363
MlyI GAGTC 2 cut(s) 39, 222
MmeI TCCRAC 4 cut(s) 725, 1287, 1459, 1548
Mph1103I ATGCAT 1 cut(s) 248
MroXI GAANNNNTTC 1 cut(s) 1223
MseI TTAA 6 cut(s) 504, 719, 1188, 1280, 1317, 1728
MslI CAYNNNNRTG 1 cut(s) 1805
MspI CCGG 6 cut(s) 109, 255, 1253, 1267, 1384, 1590
MspR9I CCNGG 2 cut(s) 319, 1650
MunI CAATTG 2 cut(s) 440, 1626
MvaI CCWGG 2 cut(s) 319, 1650
MvnI CGCG 4 cut(s) 305, 896, 915, 1407
NcoI CCATGG 1 cut(s) 1008
NdeI CATATG 1 cut(s) 158
NlaIV GGNNCC 5 cut(s) 113, 422, 619, 680, 919
NmeAIII GCCGAG 1 cut(s) 1051
NmuCI GTSAC 3 cut(s) 841, 1172, 1585
NsiI ATGCAT 1 cut(s) 248
NspI RCATGY 2 cut(s) 315, 799
PaeI GCATGC 1 cut(s) 315
PagI TCATGA 1 cut(s) 1087
PcsI WCGNNNNNNNCGW 1 cut(s) 123
PdmI GAANNNNTTC 1 cut(s) 1223
PfeI GAWTC 4 cut(s) 910, 1067, 1231, 1556
PflMI CCANNNNNTGG 1 cut(s) 852
PfoI TCCNGGA 1 cut(s) 317
PkrI GCNGC 9 cut(s) 95, 152, 260, 698, 862, 898, 1260, 1409, 1761
PleI GAGTC 2 cut(s) 38, 222
PpsI GAGTC 2 cut(s) 38, 222
Psp124BI GAGCTC 1 cut(s) 363
Psp1406I AACGTT 1 cut(s) 272
Psp6I CCWGG 2 cut(s) 317, 1648
PspEI GGTNACC 1 cut(s) 841
PspFI CCCAGC 2 cut(s) 405, 536
PspGI CCWGG 2 cut(s) 317, 1648
PspN4I GGNNCC 5 cut(s) 113, 422, 619, 680, 919
PspPI GGNCC 4 cut(s) 281, 1250, 1511, 1694
PstNI CAGNNNCTG 1 cut(s) 1152
PsuI RGATCY 6 cut(s) 335, 484, 617, 678, 726, 969
RsaI GTAC 2 cut(s) 1333, 1502
RsaNI GTAC 2 cut(s) 1332, 1501
RseI CAYNNNNRTG 1 cut(s) 1805
SacI GAGCTC 1 cut(s) 363
SaqAI TTAA 6 cut(s) 504, 719, 1188, 1280, 1317, 1728
SatI GCNGC 9 cut(s) 94, 151, 259, 697, 861, 897, 1259, 1408, 1760
Sau96I GGNCC 4 cut(s) 281, 1250, 1511, 1694
SchI GAGTC 2 cut(s) 39, 222
ScrFI CCNGG 2 cut(s) 319, 1650
SduI GDGCHC 1 cut(s) 363
SfaNI GCATC 2 cut(s) 255, 1012
SfcI CTRYAG 1 cut(s) 1194
SinI GGWCC 1 cut(s) 1511
SmiMI CAYNNNNRTG 1 cut(s) 1805
SmlI CTYRAG 1 cut(s) 707
SmoI CTYRAG 1 cut(s) 707
SphI GCATGC 1 cut(s) 315
SspMI CTAG 6 cut(s) 386, 654, 740, 1487, 1824, 1853
SstI GAGCTC 1 cut(s) 363
StyD4I CCNGG 2 cut(s) 317, 1648
StyI CCWWGG 4 cut(s) 621, 882, 1008, 1852
TaaI ACNGT 9 cut(s) 371, 516, 575, 614, 934, 1363, 1505, 1703, 1777
TaiI ACGT 3 cut(s) 211, 275, 1042
TaqI TCGA 8 cut(s) 77, 376, 426, 458, 557, 981, 1211, 1682
TauI GCSGC 8 cut(s) 96, 153, 261, 863, 899, 1261, 1410, 1762
TfiI GAWTC 4 cut(s) 910, 1067, 1231, 1556
Tru1I TTAA 6 cut(s) 504, 719, 1188, 1280, 1317, 1728
Tru9I TTAA 6 cut(s) 504, 719, 1188, 1280, 1317, 1728
TscAI CASTG 5 cut(s) 128, 939, 1708, 1741, 1780
TseFI GTSAC 3 cut(s) 841, 1172, 1585
TseI GCWGC 1 cut(s) 696
Tsp45I GTSAC 3 cut(s) 841, 1172, 1585
TspDTI ATGAA 2 cut(s) 1104, 1634
TspGWI ACGGA 3 cut(s) 477, 962, 1610
TspRI CASTG 5 cut(s) 128, 939, 1708, 1741, 1780
Van91I CCANNNNNTGG 1 cut(s) 852
VpaK11BI GGWCC 1 cut(s) 1511
XagI CCTNNNNNAGG 2 cut(s) 625, 1532
XapI RAATTY 3 cut(s) 985, 1060, 1158
XceI RCATGY 2 cut(s) 315, 799
XcmI CCANNNNNNNNNTGG 1 cut(s) 853
XmaJI CCTAGG 1 cut(s) 1852
XmnI GAANNNNTTC 1 cut(s) 1223
XspI CTAG 6 cut(s) 386, 654, 740, 1487, 1824, 1853
Zsp2I ATGCAT 1 cut(s) 248
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.