RchiOBHm_Chr3g0485951

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0000030
Physical Location & Seq
Reverse (-)
32767822 .. 32771937
4116 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ45051

Sequence Viewer

Length: 1233 bp
ATGGGCGTCATGGATAGAGGGTGCGATGTGAATCTTGAAGGAAGCACCGAGGACCCTGATATACTGGGGCTGAAGAGCAAGCTTTCAAGGAAGGAGAAGGAGATAACCATACATGGTCTGAGGAGGTTGTTGATTGAATCTGAAAGTACCGACGACACTTTTAAGGTCAGCTTTGCTTTGTATGCCCTTGCAACTCTGTTAATCCCAGTTACGGGAATCGAAGTTGATCCAAGATACCTTATACCACTTAAGGATCCTAATGCCCTGGGTTCAAAAAACTGGGCAAAGTTTGCATTCGCCAAGCTTGTTGAAGGGTTGTCATCATTCCAGGCCACGCGGACTGGTTTGGCAGGAGGTTGTATTATGTTCCTTCAATTGTTCTACCTGGACGTTGTTGGCAACGGTATCTGTATATATCCAAAGATTGGGAAACCAGTGATGACGTGGAGCAGAGATGACTTGAAGAGAGTTTATGAAAAAGTGGAGAGCGAGGGCGGATTTAAAAGCGAGAATGTGCGTGTAACAAAGAAGTATTTCAGGGGAAATGTACTTTCAGGGACTGGATCAGTTGATCCCAGCACAGGGATTAAGACAACTGTAGTAGACGATTTATCAGAAGTGAGGTCTGATGTTGGTGTTGTGAAAGGGGATATAGAGAGTTTGAAGTTAACGATTAGTCGGTTGGAGCCAGACATGGGTCGATTGAGGAGAGCAATTCTGACACTAGAATCCACGGTTGGGCAACTTAAGGCCAACGGTCTCGGCGGCATTGTTGCTGAAGCAATCAAGCAAGTGTTTGAAGACAAGTCCTACACTTACGGTGGTAATTTTGGGAACGATGGTCTTTTTATCAATGAAGAGCACCAAGGCACAGAAGCTGAGCAACATGACGATGAGATGCCTCATAACAAATCTATCATTGTCATGTCCACTGACAAGGATGCATATGGATGTGACAGCATTGACATGGAAGAAGATGAGGCAGGGAGTTTCCCGGCGGTGTCTGAGATATCGCACAGCGACTCATACCTACTGACCTATCTATTCAGCAAGAAGGTTACCGCCAACGACAGTGTTGGGAGCAATGAAGTTGCGAGGCACGAGGAATGGTCTGTTTCTCGATGGGACATGAGGAGCTTGTCCCCAATGCAATGTCTGACCTGTGAGGTACTATATGGCATGCGATCCAGATCAAGTATGCTTTGTTCTGTCAGTCTATGGCATTCAATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

410

Amino Acids

45.25

Weight (kDa)

5.11

Isoelectric Point (pI)

37.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 425
AccI GTMKAC 1 cut(s) 603
AccII CGCG 1 cut(s) 337
AciI CCGC 5 cut(s) 337, 495, 765, 998, 1062
AclWI GGATC 6 cut(s) 221, 248, 261, 566, 571, 1179
AcuI CTGAAG 2 cut(s) 92, 798
AcyI GRCGYC 1 cut(s) 6
AfaI GTAC 3 cut(s) 148, 549, 1170
AfiI CCNNNNNNNGG 7 cut(s) 211, 212, 425, 581, 582, 695, 738
AflII CTTAAG 2 cut(s) 248, 746
AjiI CACGTC 1 cut(s) 444
AjnI CCWGG 3 cut(s) 264, 327, 384
AjuI GAANNNNNNNTTGG 2 cut(s) 720, 752
AluBI AGCT 5 cut(s) 82, 171, 304, 878, 1137
AluI AGCT 5 cut(s) 82, 171, 304, 878, 1137
Alw21I GWGCWC 1 cut(s) 864
Alw26I GTCTC 1 cut(s) 764
AlwI GGATC 6 cut(s) 221, 248, 261, 566, 571, 1179
AlwNI CAGNNNCTG 2 cut(s) 560, 878
AoxI GGCC 2 cut(s) 330, 750
Asp700I GAANNNNTTC 1 cut(s) 533
AspS9I GGNCC 1 cut(s) 52
AsuC2I CCSGG 1 cut(s) 995
AvaII GGWCC 1 cut(s) 52
BamHI GGATCC 1 cut(s) 253
BauI CACGAG 1 cut(s) 1100
BbsI GAAGAC 1 cut(s) 807
Bbv12I GWGCWC 1 cut(s) 864
BccI CCATC 2 cut(s) 833, 1116
BciT130I CCWGG 3 cut(s) 266, 329, 386
BcnI CCSGG 1 cut(s) 995
BcoDI GTCTC 1 cut(s) 764
BfaI CTAG 1 cut(s) 725
BfmI CTRYAG 1 cut(s) 597
BfrI CTTAAG 2 cut(s) 248, 746
BisI GCNGC 1 cut(s) 766
BlpI GCTNAGC 1 cut(s) 879
BlsI GCNGC 1 cut(s) 767
Bme1390I CCNGG 4 cut(s) 266, 329, 386, 995
Bme18I GGWCC 1 cut(s) 52
BmgBI CACGTC 1 cut(s) 444
BmgT120I GGNCC 1 cut(s) 52
BmiI GGNNCC 3 cut(s) 54, 255, 687
BmrFI CCNGG 4 cut(s) 266, 329, 386, 995
BmrI ACTGGG 3 cut(s) 74, 200, 289
BmsI GCATC 2 cut(s) 888, 931
BmuI ACTGGG 3 cut(s) 74, 200, 289
BoxI GACNNNNGTC 1 cut(s) 696
BpiI GAAGAC 1 cut(s) 807
Bpu1102I GCTNAGC 1 cut(s) 879
BpuMI CCSGG 1 cut(s) 995
BsaBI GATNNNNATC 2 cut(s) 30, 1189
BsaHI GRCGYC 1 cut(s) 6
BsaI GGTCTC 1 cut(s) 764
BsaJI CCNNGG 5 cut(s) 48, 264, 265, 732, 865
Bsc4I CCNNNNNNNGG 7 cut(s) 211, 212, 425, 581, 582, 695, 738
Bse1I ACTGG 6 cut(s) 69, 206, 284, 346, 434, 565
Bse3DI GCAATG 2 cut(s) 1090, 1157
Bse8I GATNNNNATC 2 cut(s) 30, 1189
BseBI CCWGG 3 cut(s) 266, 329, 386
BseDI CCNNGG 5 cut(s) 48, 264, 265, 732, 865
BseGI GGATG 2 cut(s) 946, 956
BseJI GATNNNNATC 2 cut(s) 30, 1189
BseLI CCNNNNNNNGG 7 cut(s) 211, 212, 425, 581, 582, 695, 738
BseMI GCAATG 2 cut(s) 1090, 1157
BseMII CTCAG 3 cut(s) 110, 870, 996
BseNI ACTGG 6 cut(s) 69, 206, 284, 346, 434, 565
BseRI GAGGAG 3 cut(s) 136, 721, 1147
BseYI CCCAGC 1 cut(s) 575
Bsh1236I CGCG 1 cut(s) 337
BshFI GGCC 2 cut(s) 332, 752
BsiHKAI GWGCWC 1 cut(s) 864
BsiSI CCGG 1 cut(s) 995
BslFI GGGAC 3 cut(s) 571, 1126, 1139
BslI CCNNNNNNNGG 7 cut(s) 211, 212, 425, 581, 582, 695, 738
BsmAI GTCTC 1 cut(s) 764
BsmFI GGGAC 3 cut(s) 571, 1126, 1139
BsmI GAATGC 2 cut(s) 293, 1222
BsnI GGCC 2 cut(s) 332, 752
Bso31I GGTCTC 1 cut(s) 764
Bsp1286I GDGCHC 1 cut(s) 864
Bsp143I GATC 6 cut(s) 226, 253, 563, 571, 1184, 1190
Bsp1720I GCTNAGC 1 cut(s) 879
BspACI CCGC 5 cut(s) 337, 495, 765, 998, 1062
BspANI GGCC 2 cut(s) 332, 752
BspCNI CTCAG 3 cut(s) 111, 871, 997
BspFNI CGCG 1 cut(s) 337
BspLI GGNNCC 3 cut(s) 54, 255, 687
BspPI GGATC 6 cut(s) 221, 248, 261, 566, 571, 1179
BspQI GCTCTTC 2 cut(s) 68, 852
BspTI CTTAAG 2 cut(s) 248, 746
BspTNI GGTCTC 1 cut(s) 764
BsrDI GCAATG 2 cut(s) 1090, 1157
BsrI ACTGG 6 cut(s) 69, 206, 284, 346, 434, 565
BssECI CCNNGG 5 cut(s) 48, 264, 265, 732, 865
BssMI GATC 6 cut(s) 226, 253, 563, 571, 1184, 1190
BssNI GRCGYC 1 cut(s) 6
BssSI CACGAG 1 cut(s) 1100
BssT1I CCWWGG 1 cut(s) 865
Bst2BI CACGAG 1 cut(s) 1100
Bst2UI CCWGG 3 cut(s) 266, 329, 386
Bst4CI ACNGT 6 cut(s) 404, 598, 736, 758, 821, 1073
Bst6I CTCTTC 3 cut(s) 68, 458, 852
BstACI GRCGYC 1 cut(s) 6
BstAFI CTTAAG 2 cut(s) 248, 746
BstAPI GCANNNNNTGC 1 cut(s) 290
BstC8I GCNNGC 2 cut(s) 80, 1181
BstDEI CTNAG 3 cut(s) 119, 879, 1005
BstDSI CCRYGG 1 cut(s) 732
BstEII GGTNACC 1 cut(s) 1057
BstF5I GGATG 2 cut(s) 946, 956
BstFNI CGCG 1 cut(s) 337
BstKTI GATC 6 cut(s) 229, 256, 566, 574, 1187, 1193
BstMAI GTCTC 1 cut(s) 764
BstMBI GATC 6 cut(s) 226, 253, 563, 571, 1184, 1190
BstMWI GCNNNNNNNGC 2 cut(s) 182, 290
BstNI CCWGG 3 cut(s) 266, 329, 386
BstNSI RCATGY 1 cut(s) 1183
BstPAI GACNNNNGTC 1 cut(s) 696
BstPI GGTNACC 1 cut(s) 1057
BstSCI CCNGG 4 cut(s) 264, 327, 384, 993
BstSFI CTRYAG 1 cut(s) 597
BstUI CGCG 1 cut(s) 337
BstV2I GAAGAC 1 cut(s) 807
BstX2I RGATCY 1 cut(s) 253
BstYI RGATCY 1 cut(s) 253
BsuRI GGCC 2 cut(s) 332, 752
BtgI CCRYGG 1 cut(s) 732
BtgZI GCGATG 1 cut(s) 39
BtrI CACGTC 1 cut(s) 444
BtsCI GGATG 2 cut(s) 946, 956
BtsIMutI CAGTG 3 cut(s) 441, 930, 1078
Cac8I GCNNGC 2 cut(s) 80, 1181
CaiI CAGNNNCTG 2 cut(s) 560, 878
Cfr13I GGNCC 1 cut(s) 52
Csp6I GTAC 3 cut(s) 147, 548, 1169
CviAII CATG 8 cut(s) 10, 113, 694, 887, 925, 967, 1129, 1180
CviJI RGCY 9 cut(s) 70, 82, 171, 304, 332, 688, 752, 878, 1137
CviKI_1 RGCY 9 cut(s) 70, 82, 171, 304, 332, 688, 752, 878, 1137
CviQI GTAC 3 cut(s) 147, 548, 1169
DdeI CTNAG 3 cut(s) 119, 879, 1005
DpnI GATC 6 cut(s) 228, 255, 565, 573, 1186, 1192
DpnII GATC 6 cut(s) 226, 253, 563, 571, 1184, 1190
DraI TTTAAA 1 cut(s) 502
Eam1104I CTCTTC 3 cut(s) 68, 458, 852
EarI CTCTTC 3 cut(s) 68, 458, 852
EciI GGCGGA 1 cut(s) 510
Eco130I CCWWGG 1 cut(s) 865
Eco31I GGTCTC 1 cut(s) 764
Eco32I GATATC 1 cut(s) 1011
Eco47I GGWCC 1 cut(s) 52
Eco57I CTGAAG 2 cut(s) 92, 798
Eco91I GGTNACC 1 cut(s) 1057
EcoO109I RGGNCCY 1 cut(s) 52
EcoO65I GGTNACC 1 cut(s) 1057
EcoRII CCWGG 3 cut(s) 264, 327, 384
EcoRV GATATC 1 cut(s) 1011
EcoT14I CCWWGG 1 cut(s) 865
EcoT22I ATGCAT 1 cut(s) 946
ErhI CCWWGG 1 cut(s) 865
FaeI CATG 8 cut(s) 13, 116, 697, 890, 928, 970, 1132, 1183
FalI AAGNNNNNCTT 2 cut(s) 155, 187
FaqI GGGAC 3 cut(s) 571, 1126, 1139
FatI CATG 8 cut(s) 9, 112, 693, 886, 924, 966, 1128, 1179
FauNDI CATATG 1 cut(s) 946
FblI GTMKAC 1 cut(s) 603
Fnu4HI GCNGC 1 cut(s) 766
FokI GGATG 2 cut(s) 953, 963
Fsp4HI GCNGC 1 cut(s) 766
FspBI CTAG 1 cut(s) 725
GluI GCNGC 1 cut(s) 766
GsaI CCCAGC 1 cut(s) 579
HaeIII GGCC 2 cut(s) 332, 752
HapII CCGG 1 cut(s) 995
Hin1I GRCGYC 1 cut(s) 6
Hin1II CATG 8 cut(s) 13, 116, 697, 890, 928, 970, 1132, 1183
HincII GTYRAC 1 cut(s) 669
HindII GTYRAC 1 cut(s) 669
HindIII AAGCTT 2 cut(s) 80, 302
HinfI GANTC 5 cut(s) 31, 137, 216, 728, 1022
HpaI GTTAAC 1 cut(s) 669
HpaII CCGG 1 cut(s) 995
Hpy166II GTNNAC 3 cut(s) 604, 669, 930
Hpy188I TCNGA 7 cut(s) 120, 142, 616, 628, 720, 1006, 1158
Hpy188III TCNNGA 3 cut(s) 35, 1119, 1188
Hpy8I GTNNAC 3 cut(s) 604, 669, 930
Hpy99I CGWCG 1 cut(s) 155
HpyAV CCTTC 6 cut(s) 32, 85, 91, 305, 380, 1048
HpyCH4III ACNGT 6 cut(s) 404, 598, 736, 758, 821, 1073
HpyCH4IV ACGT 2 cut(s) 390, 443
HpyCH4V TGCA 4 cut(s) 191, 293, 944, 1150
HpyF10VI GCNNNNNNNGC 2 cut(s) 182, 290
HpyF3I CTNAG 3 cut(s) 119, 879, 1005
HpySE526I ACGT 2 cut(s) 390, 443
Hsp92I GRCGYC 1 cut(s) 6
Hsp92II CATG 8 cut(s) 13, 116, 697, 890, 928, 970, 1132, 1183
KspAI GTTAAC 1 cut(s) 669
Kzo9I GATC 6 cut(s) 226, 253, 563, 571, 1184, 1190
LguI GCTCTTC 2 cut(s) 68, 852
LmnI GCTCC 4 cut(s) 447, 685, 1080, 1134
LweI GCATC 2 cut(s) 888, 931
MaeI CTAG 1 cut(s) 725
MaeII ACGT 2 cut(s) 390, 443
MaeIII GTNAC 4 cut(s) 208, 520, 953, 1057
MalI GATC 6 cut(s) 228, 255, 565, 573, 1186, 1192
MboI GATC 6 cut(s) 226, 253, 563, 571, 1184, 1190
MboII GAAGA 6 cut(s) 85, 475, 812, 869, 983, 986
MfeI CAATTG 1 cut(s) 374
MflI RGATCY 1 cut(s) 253
MhlI GDGCHC 1 cut(s) 864
MluCI AATT 3 cut(s) 374, 714, 826
MlyI GAGTC 1 cut(s) 1016
MmeI TCCRAC 1 cut(s) 663
Mph1103I ATGCAT 1 cut(s) 946
MroXI GAANNNNTTC 1 cut(s) 533
MseI TTAA 7 cut(s) 162, 200, 249, 501, 588, 668, 747
MslI CAYNNNNRTG 4 cut(s) 891, 923, 949, 965
MspCI CTTAAG 2 cut(s) 248, 746
MspI CCGG 1 cut(s) 995
MspR9I CCNGG 4 cut(s) 266, 329, 386, 995
MunI CAATTG 1 cut(s) 374
Mva1269I GAATGC 2 cut(s) 293, 1222
MvaI CCWGG 3 cut(s) 266, 329, 386
MvnI CGCG 1 cut(s) 337
MwoI GCNNNNNNNGC 2 cut(s) 182, 290
NciI CCSGG 1 cut(s) 995
NdeI CATATG 1 cut(s) 946
NdeII GATC 6 cut(s) 226, 253, 563, 571, 1184, 1190
NlaIII CATG 8 cut(s) 13, 116, 697, 890, 928, 970, 1132, 1183
NlaIV GGNNCC 3 cut(s) 54, 255, 687
NmeAIII GCCGAG 1 cut(s) 741
NmuCI GTSAC 1 cut(s) 953
NsiI ATGCAT 1 cut(s) 946
NspI RCATGY 1 cut(s) 1183
PaeI GCATGC 1 cut(s) 1183
PasI CCCWGGG 1 cut(s) 265
PciSI GCTCTTC 2 cut(s) 68, 852
PctI GAATGC 2 cut(s) 293, 1222
PdmI GAANNNNTTC 1 cut(s) 533
PfeI GAWTC 4 cut(s) 31, 137, 216, 728
PflMI CCANNNNNTGG 1 cut(s) 425
PkrI GCNGC 1 cut(s) 767
PleI GAGTC 1 cut(s) 1016
PpsI GAGTC 1 cut(s) 1016
PpuMI RGGWCCY 1 cut(s) 52
PshAI GACNNNNGTC 1 cut(s) 696
Psp5II RGGWCCY 1 cut(s) 52
Psp6I CCWGG 3 cut(s) 264, 327, 384
PspEI GGTNACC 1 cut(s) 1057
PspFI CCCAGC 1 cut(s) 575
PspGI CCWGG 3 cut(s) 264, 327, 384
PspN4I GGNNCC 3 cut(s) 54, 255, 687
PspPI GGNCC 1 cut(s) 52
PspPPI RGGWCCY 1 cut(s) 52
PsrI GAACNNNNNNTAC 2 cut(s) 1189, 1221
PstNI CAGNNNCTG 2 cut(s) 560, 878
PsuI RGATCY 1 cut(s) 253
RsaI GTAC 3 cut(s) 148, 549, 1170
RsaNI GTAC 3 cut(s) 147, 548, 1169
RseI CAYNNNNRTG 4 cut(s) 891, 923, 949, 965
SapI GCTCTTC 2 cut(s) 68, 852
SaqAI TTAA 7 cut(s) 162, 200, 249, 501, 588, 668, 747
SatI GCNGC 1 cut(s) 766
Sau3AI GATC 6 cut(s) 226, 253, 563, 571, 1184, 1190
Sau96I GGNCC 1 cut(s) 52
SchI GAGTC 1 cut(s) 1016
ScrFI CCNGG 4 cut(s) 266, 329, 386, 995
SduI GDGCHC 1 cut(s) 864
SfaNI GCATC 2 cut(s) 888, 931
SfcI CTRYAG 1 cut(s) 597
SinI GGWCC 1 cut(s) 52
SmiMI CAYNNNNRTG 4 cut(s) 891, 923, 949, 965
SmlI CTYRAG 2 cut(s) 248, 746
SmoI CTYRAG 2 cut(s) 248, 746
SphI GCATGC 1 cut(s) 1183
Sse9I AATT 3 cut(s) 374, 714, 826
SsiI CCGC 5 cut(s) 337, 495, 765, 998, 1062
SspMI CTAG 1 cut(s) 725
StyD4I CCNGG 4 cut(s) 264, 327, 384, 993
StyI CCWWGG 1 cut(s) 865
TaaI ACNGT 6 cut(s) 404, 598, 736, 758, 821, 1073
TaiI ACGT 2 cut(s) 393, 446
TaqI TCGA 3 cut(s) 219, 700, 1120
TasI AATT 3 cut(s) 374, 714, 826
TatI WGTACW 1 cut(s) 547
TauI GCSGC 1 cut(s) 768
TfiI GAWTC 4 cut(s) 31, 137, 216, 728
Tru1I TTAA 7 cut(s) 162, 200, 249, 501, 588, 668, 747
Tru9I TTAA 7 cut(s) 162, 200, 249, 501, 588, 668, 747
TscAI CASTG 3 cut(s) 441, 937, 1078
TseFI GTSAC 1 cut(s) 953
Tsp45I GTSAC 1 cut(s) 953
TspDTI ATGAA 3 cut(s) 489, 870, 1101
TspRI CASTG 3 cut(s) 441, 937, 1078
Van91I CCANNNNNTGG 1 cut(s) 425
Vha464I CTTAAG 2 cut(s) 248, 746
VpaK11BI GGWCC 1 cut(s) 52
XceI RCATGY 1 cut(s) 1183
XcmI CCANNNNNNNNNTGG 1 cut(s) 441
XmiI GTMKAC 1 cut(s) 603
XmnI GAANNNNTTC 1 cut(s) 533
XspI CTAG 1 cut(s) 725
Zsp2I ATGCAT 1 cut(s) 946
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.