Rh1DG177400

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
OG0000030
Physical Location & Seq
Reverse (-)
36250937 .. 36253865
2929 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG177400.1

Sequence Viewer

Length: 1779 bp
ATGTCTTCCCTATCAGCTGGAAAGTTAGTTGCAACAATAGAAATGGGGTTTGGGTCACTTTATGAATTTCGCTGTACGAAAGTGAATCTCCCACTTTGCCAAGTGCTGGTTGAAAATTTTGACGTGGCGAACTCAAGCATCAAGATTCATGGAAGGAACCTGACAATCACACATGAAGACTTTGAACGCATAATGGGCGTTAGGCATGGAGGTTGTGATGTGGAGGTTGAAGGAAACACCGAGGACCCTGATATATTGGCCCTGGAGAGGAAGATTTCGGGGAAGGAGAATCAGATAACAATACATGGATTGAGGAGGGTGCTGATTGAGTCTGAAAGCGCTGATGAGATATTTAGGATCAGCTTTGCCTTGTATGCCCTTGCAACCCTGCTATCTCCGGTAACAGGAATCCATGTCGAACGAAGATATCTTATACCACTTAAGGAACCAAATGGCTTGTGTTCAAAAAACTGGGCAAAGTTTGCATTTGATAAGCTCGTTGAAGGGGTGTCATTGTTTCAGGGCACGGGGATTGGATTGGCCGGAGGTTGTATTTTGTTCCTTCAGTTGTTCTATCTGGACGTTGTTAGCAATGGCATGTTTGTTTTGCCGAAGACGGTGAAACCTGTTATGATATGGGGCGCGGACGAGGCGAAGAAAATTTATGAGCAGGTAGAGAGCATGGGGGGATGGAAAAGTGAGTCTGTTTATGTGACAAATAGGTATTTGTGGGACAGAACAAATCAGTACAGTGGATCGGTTGATGCCAGCACAGGGATAAAAACCAATGTCGTGGAAGACTTGTCAGAAGTGATGTCTGATGTGGGTGTCGTTAAAGGGGACATCAGGAATCTAAAGTCAATGGTCGGTCAATTGGGACCAGATATGTGCCGTTTGAGGAGCGCAATTATGACGTTAGAAACATCTCTTGAGCAGCTGAAGGCTGAGGGCCTCTCTCAGCTTGTTTCAGACACTATCATGGGAGTATTTGAGGATAAGCAGAATGATTATGTGGGCAATGATGGGACTGATGTTTTTGTTGATGGTCAAAAGCAGCATGGTCCAGAATTTGAGTCAGATGACGATGGGATGCTTAATGCTAAATCCAAAATTGTCATTTCCAATGAGGTGGTAGCATACCGGGATCGCAGCACTGAGGTTGAGAGAAATGAACAGACGAGGTTCGAAGCGGTGGCCGAAATTTCAGAGAGGGATGCATACTTATTGGCATATCTCTTCAGCAAGAAGGTTTCTGCGGACGACAGTTTTGGGAGCAACGAAGTTGCTAGGTTCGAGGATTCAGGTGTATCTCGCTGGGACCTGAGCTGCTTGTCCCCAACGCAGTCGTTGACTGCCGAGGTTGTCAACATATCAGCTGCGTACTTGTGCCAGAGCGGATCTGAGAACTGGTTCTTGCCAGCTACAGTATCGGAGCGTGCTAAGGAGATTTCGGCAGGTATGCTAGTGGAAGCTATTGTGCCTTCGACCATTACACTCTGCAAACTAGGAAGATTTATTGGCCGATTATCGTCATGCAATAAGATGTTCCTCCCCATCCACGACGGGGAAGTGAAGCATTGGTTTTTGGCTGTGGTGAACATACCGGACGCCGAGTGTGAAATATGGGACAGCAACCCTGTTGATTCTGCTAATACACGCAGGCAGGAATATGCCATTGCATCGTTTAACTCCGGCGACCAGAGGGTTCGTATGGCACTTGAGATTGTCAATCACCCTACGAATGAAATTCGTGACCGGGTGTGGAGTGCCGCCGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

592

Amino Acids

65.58

Weight (kDa)

4.91

Isoelectric Point (pI)

36.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 661, 1445
AccB7I CCANNNNNTGG 1 cut(s) 106
AccBSI CCGCTC 1 cut(s) 1395
AccII CGCG 1 cut(s) 644
AciI CCGC 6 cut(s) 644, 1190, 1256, 1395, 1770, 1773
AclWI GGATC 4 cut(s) 365, 763, 1152, 1405
AcoI YGGCCR 3 cut(s) 540, 1194, 1519
AcsI RAATTY 6 cut(s) 65, 115, 660, 1067, 1200, 1746
AcuI CTGAAG 3 cut(s) 548, 959, 1222
AcyI GRCGYC 1 cut(s) 1608
AfaI GTAC 3 cut(s) 76, 749, 1382
AfeI AGCGCT 1 cut(s) 340
AfiI CCNNNNNNNGG 5 cut(s) 106, 267, 404, 774, 1564
AflII CTTAAG 1 cut(s) 440
AgsI TTSAA 5 cut(s) 113, 185, 230, 465, 503
AjiI CACGTC 1 cut(s) 124
AjnI CCWGG 1 cut(s) 261
AjuI GAANNNNNNNTTGG 2 cut(s) 33, 65
AluBI AGCT 9 cut(s) 17, 363, 496, 937, 961, 1326, 1376, 1421, 1472
AluI AGCT 9 cut(s) 17, 363, 496, 937, 961, 1326, 1376, 1421, 1472
AlwI GGATC 4 cut(s) 365, 763, 1152, 1405
Aor51HI AGCGCT 1 cut(s) 340
AoxI GGCC 5 cut(s) 258, 540, 949, 1194, 1519
ApeKI GCWGC 5 cut(s) 934, 1054, 1149, 1326, 1376
ApoI RAATTY 6 cut(s) 65, 115, 660, 1067, 1200, 1746
ArsI GACNNNNNNTTYG 2 cut(s) 1250, 1282
Asp700I GAANNNNTTC 1 cut(s) 1409
AspLEI GCGC 3 cut(s) 341, 644, 905
AspS9I GGNCC 6 cut(s) 244, 259, 878, 949, 1061, 1318
AsuC2I CCSGG 2 cut(s) 1142, 1757
AsuHPI GGTGA 3 cut(s) 631, 1606, 1724
AsuII TTCGAA 1 cut(s) 1185
AvaII GGWCC 4 cut(s) 244, 878, 1061, 1318
BaeGI GKGCMC 1 cut(s) 527
BbsI GAAGAC 3 cut(s) 183, 620, 804
BbvCI CCTCAGC 1 cut(s) 945
BbvI GCAGC 5 cut(s) 946, 1066, 1161, 1313, 1363
BccI CCATC 5 cut(s) 684, 1016, 1037, 1079, 1562
BceAI ACGGC 1 cut(s) 876
BciT130I CCWGG 1 cut(s) 263
BcnI CCSGG 2 cut(s) 1142, 1757
BfaI CTAG 3 cut(s) 1287, 1463, 1505
BfmI CTRYAG 1 cut(s) 1422
BfoI RGCGCY 1 cut(s) 342
BfrI CTTAAG 1 cut(s) 440
BfuAI ACCTGC 2 cut(s) 661, 1445
BisI GCNGC 7 cut(s) 935, 1055, 1150, 1327, 1377, 1770, 1773
BlsI GCNGC 7 cut(s) 936, 1056, 1151, 1328, 1378, 1771, 1774
Bme1390I CCNGG 3 cut(s) 263, 1142, 1757
Bme18I GGWCC 4 cut(s) 244, 878, 1061, 1318
BmgBI CACGTC 1 cut(s) 124
BmgT120I GGNCC 6 cut(s) 244, 259, 878, 949, 1061, 1318
BmiI GGNNCC 5 cut(s) 158, 246, 447, 879, 1319
BmrFI CCNGG 3 cut(s) 263, 1142, 1757
BmrI ACTGGG 1 cut(s) 481
BmsI GCATC 5 cut(s) 147, 754, 1080, 1204, 1688
BmuI ACTGGG 1 cut(s) 481
BpiI GAAGAC 3 cut(s) 183, 620, 804
BplI GAGNNNNNCTC 2 cut(s) 938, 970
BpmI CTGGAG 1 cut(s) 284
Bpu10I CCTNAGC 3 cut(s) 945, 1322, 1440
Bpu14I TTCGAA 1 cut(s) 1185
BpuEI CTTGAG 3 cut(s) 118, 950, 1739
BpuMI CCSGG 2 cut(s) 1142, 1757
BsaHI GRCGYC 1 cut(s) 1608
BsaJI CCNNGG 3 cut(s) 240, 261, 1356
BsaWI WCCGGW 2 cut(s) 397, 1603
Bsc4I CCNNNNNNNGG 5 cut(s) 106, 267, 404, 774, 1564
Bse1I ACTGG 2 cut(s) 476, 1412
Bse3DI GCAATG 3 cut(s) 598, 1024, 1674
BseBI CCWGG 1 cut(s) 263
BseDI CCNNGG 3 cut(s) 240, 261, 1356
BseGI GGATG 4 cut(s) 695, 1095, 1219, 1554
BseLI CCNNNNNNNGG 5 cut(s) 106, 267, 404, 774, 1564
BseMI GCAATG 3 cut(s) 598, 1024, 1674
BseMII CTCAG 5 cut(s) 936, 971, 1146, 1313, 1392
BseNI ACTGG 2 cut(s) 476, 1412
BseRI GAGGAG 2 cut(s) 328, 913
BseSI GKGCMC 1 cut(s) 527
BseXI GCAGC 5 cut(s) 946, 1066, 1161, 1313, 1363
BseYI CCCAGC 1 cut(s) 1314
Bsh1236I CGCG 1 cut(s) 644
BshFI GGCC 5 cut(s) 260, 542, 951, 1196, 1521
BsiSI CCGG 6 cut(s) 398, 543, 1141, 1604, 1692, 1756
BslFI GGGAC 7 cut(s) 746, 854, 891, 1039, 1318, 1331, 1640
BslI CCNNNNNNNGG 5 cut(s) 106, 267, 404, 774, 1564
BsmFI GGGAC 7 cut(s) 746, 854, 891, 1039, 1318, 1331, 1640
BsnI GGCC 5 cut(s) 260, 542, 951, 1196, 1521
Bsp119I TTCGAA 1 cut(s) 1185
Bsp1286I GDGCHC 1 cut(s) 527
Bsp143I GATC 4 cut(s) 357, 755, 1144, 1397
BspACI CCGC 6 cut(s) 644, 1190, 1256, 1395, 1770, 1773
BspANI GGCC 5 cut(s) 260, 542, 951, 1196, 1521
BspCNI CTCAG 5 cut(s) 937, 970, 1147, 1314, 1393
BspFNI CGCG 1 cut(s) 644
BspLI GGNNCC 5 cut(s) 158, 246, 447, 879, 1319
BspMI ACCTGC 2 cut(s) 661, 1445
BspPI GGATC 4 cut(s) 365, 763, 1152, 1405
BspT104I TTCGAA 1 cut(s) 1185
BspTI CTTAAG 1 cut(s) 440
BsrBI CCGCTC 1 cut(s) 1395
BsrDI GCAATG 3 cut(s) 598, 1024, 1674
BsrI ACTGG 2 cut(s) 476, 1412
BssECI CCNNGG 3 cut(s) 240, 261, 1356
BssMI GATC 4 cut(s) 357, 755, 1144, 1397
BssNI GRCGYC 1 cut(s) 1608
Bst2UI CCWGG 1 cut(s) 263
Bst4CI ACNGT 4 cut(s) 619, 752, 1265, 1426
Bst6I CTCTTC 1 cut(s) 1241
BstACI GRCGYC 1 cut(s) 1608
BstAFI CTTAAG 1 cut(s) 440
BstAPI GCANNNNNTGC 1 cut(s) 482
BstBI TTCGAA 1 cut(s) 1185
BstC8I GCNNGC 4 cut(s) 769, 1419, 1437, 1661
BstDEI CTNAG 7 cut(s) 945, 957, 1155, 1322, 1401, 1440, 1776
BstF5I GGATG 4 cut(s) 695, 1095, 1219, 1554
BstFNI CGCG 1 cut(s) 644
BstH2I RGCGCY 1 cut(s) 342
BstHHI GCGC 3 cut(s) 341, 644, 905
BstKTI GATC 4 cut(s) 360, 758, 1147, 1400
BstMBI GATC 4 cut(s) 357, 755, 1144, 1397
BstMWI GCNNNNNNNGC 4 cut(s) 195, 374, 482, 650
BstNI CCWGG 1 cut(s) 263
BstNSI RCATGY 1 cut(s) 601
BstSCI CCNGG 3 cut(s) 261, 1140, 1755
BstSFI CTRYAG 1 cut(s) 1422
BstSLI GKGCMC 1 cut(s) 527
BstUI CGCG 1 cut(s) 644
BstV1I GCAGC 5 cut(s) 946, 1066, 1161, 1313, 1363
BstV2I GAAGAC 3 cut(s) 183, 620, 804
BstX2I RGATCY 1 cut(s) 1397
BstXI CCANNNNNNTGG 2 cut(s) 793, 1129
BstYI RGATCY 1 cut(s) 1397
BsuRI GGCC 5 cut(s) 260, 542, 951, 1196, 1521
BtrI CACGTC 1 cut(s) 124
BtsCI GGATG 4 cut(s) 695, 1095, 1219, 1554
BtsIMutI CAGTG 2 cut(s) 757, 1152
BveI ACCTGC 2 cut(s) 661, 1445
Cac8I GCNNGC 4 cut(s) 769, 1419, 1437, 1661
CfoI GCGC 3 cut(s) 341, 644, 905
Cfr13I GGNCC 6 cut(s) 244, 259, 878, 949, 1061, 1318
CseI GACGC 1 cut(s) 1616
Csp6I GTAC 3 cut(s) 75, 748, 1381
CviQI GTAC 3 cut(s) 75, 748, 1381
DdeI CTNAG 7 cut(s) 945, 957, 1155, 1322, 1401, 1440, 1776
DpnI GATC 4 cut(s) 359, 757, 1146, 1399
DpnII GATC 4 cut(s) 357, 755, 1144, 1397
EaeI YGGCCR 3 cut(s) 540, 1194, 1519
Eam1104I CTCTTC 1 cut(s) 1241
EarI CTCTTC 1 cut(s) 1241
Eco32I GATATC 1 cut(s) 428
Eco47I GGWCC 4 cut(s) 244, 878, 1061, 1318
Eco47III AGCGCT 1 cut(s) 340
Eco57I CTGAAG 3 cut(s) 548, 959, 1222
EcoO109I RGGNCCY 3 cut(s) 244, 949, 1318
EcoRII CCWGG 1 cut(s) 261
EcoRV GATATC 1 cut(s) 428
EcoT22I ATGCAT 1 cut(s) 1219
FaqI GGGAC 7 cut(s) 746, 854, 891, 1039, 1318, 1331, 1640
Fnu4HI GCNGC 7 cut(s) 935, 1055, 1150, 1327, 1377, 1770, 1773
FokI GGATG 4 cut(s) 702, 1102, 1226, 1541
Fsp4HI GCNGC 7 cut(s) 935, 1055, 1150, 1327, 1377, 1770, 1773
FspBI CTAG 3 cut(s) 1287, 1463, 1505
GlaI GCGC 3 cut(s) 340, 643, 904
GluI GCNGC 7 cut(s) 935, 1055, 1150, 1327, 1377, 1770, 1773
GsaI CCCAGC 1 cut(s) 1318
GsuI CTGGAG 1 cut(s) 284
HaeII RGCGCY 1 cut(s) 342
HaeIII GGCC 5 cut(s) 260, 542, 951, 1196, 1521
HapII CCGG 6 cut(s) 398, 543, 1141, 1604, 1692, 1756
HgaI GACGC 1 cut(s) 1616
HhaI GCGC 3 cut(s) 341, 644, 905
Hin1I GRCGYC 1 cut(s) 1608
Hin6I GCGC 3 cut(s) 339, 642, 903
HinP1I GCGC 3 cut(s) 339, 642, 903
HincII GTYRAC 2 cut(s) 1350, 1366
HindII GTYRAC 2 cut(s) 1350, 1366
HpaII CCGG 6 cut(s) 398, 543, 1141, 1604, 1692, 1756
HphI GGTGA 3 cut(s) 631, 1606, 1724
Hpy166II GTNNAC 3 cut(s) 1350, 1366, 1597
Hpy188I TCNGA 9 cut(s) 294, 334, 808, 820, 970, 1078, 1207, 1402, 1432
Hpy188III TCNNGA 6 cut(s) 142, 578, 847, 929, 1064, 1751
Hpy8I GTNNAC 3 cut(s) 1350, 1366, 1597
Hpy99I CGWCG 1 cut(s) 1565
HpyAV CCTTC 8 cut(s) 147, 224, 277, 497, 572, 934, 1240, 1491
HpyCH4III ACNGT 4 cut(s) 619, 752, 1265, 1426
HpyCH4IV ACGT 3 cut(s) 123, 582, 914
HpyCH4V TGCA 7 cut(s) 32, 383, 485, 1217, 1500, 1536, 1679
HpyF10VI GCNNNNNNNGC 4 cut(s) 195, 374, 482, 650
HpyF3I CTNAG 7 cut(s) 945, 957, 1155, 1322, 1401, 1440, 1776
HpySE526I ACGT 3 cut(s) 123, 582, 914
Hsp92I GRCGYC 1 cut(s) 1608
HspAI GCGC 3 cut(s) 339, 642, 903
Kzo9I GATC 4 cut(s) 357, 755, 1144, 1397
LmnI GCTCC 3 cut(s) 900, 1272, 1432
Lsp1109I GCAGC 5 cut(s) 946, 1066, 1161, 1313, 1363
LweI GCATC 5 cut(s) 147, 754, 1080, 1204, 1688
MaeI CTAG 3 cut(s) 1287, 1463, 1505
MaeII ACGT 3 cut(s) 123, 582, 914
MaeIII GTNAC 4 cut(s) 54, 400, 712, 1751
MalI GATC 4 cut(s) 359, 757, 1146, 1399
MbiI CCGCTC 1 cut(s) 1395
MboI GATC 4 cut(s) 357, 755, 1144, 1397
MboII GAAGA 8 cut(s) 188, 283, 435, 625, 667, 809, 1228, 1521
MfeI CAATTG 1 cut(s) 872
MflI RGATCY 1 cut(s) 1397
MhlI GDGCHC 1 cut(s) 527
MluCI AATT 9 cut(s) 65, 115, 660, 872, 906, 1067, 1110, 1200, 1746
MlyI GAGTC 3 cut(s) 338, 710, 1082
Mph1103I ATGCAT 1 cut(s) 1219
MroXI GAANNNNTTC 1 cut(s) 1409
MseI TTAA 4 cut(s) 441, 834, 1095, 1686
MslI CAYNNNNRTG 1 cut(s) 977
MspA1I CMGCKG 3 cut(s) 17, 937, 1376
MspCI CTTAAG 1 cut(s) 440
MspI CCGG 6 cut(s) 398, 543, 1141, 1604, 1692, 1756
MspR9I CCNGG 3 cut(s) 263, 1142, 1757
MunI CAATTG 1 cut(s) 872
MvaI CCWGG 1 cut(s) 263
MvnI CGCG 1 cut(s) 644
MwoI GCNNNNNNNGC 4 cut(s) 195, 374, 482, 650
NciI CCSGG 2 cut(s) 1142, 1757
NdeII GATC 4 cut(s) 357, 755, 1144, 1397
NlaIV GGNNCC 5 cut(s) 158, 246, 447, 879, 1319
NmeAIII GCCGAG 2 cut(s) 1381, 1636
NmuCI GTSAC 3 cut(s) 54, 712, 1751
NsiI ATGCAT 1 cut(s) 1219
NspI RCATGY 1 cut(s) 601
NspV TTCGAA 1 cut(s) 1185
PdmI GAANNNNTTC 1 cut(s) 1409
PfeI GAWTC 7 cut(s) 85, 145, 289, 408, 850, 1298, 1643
PflMI CCANNNNNTGG 1 cut(s) 106
PkrI GCNGC 7 cut(s) 936, 1056, 1151, 1328, 1378, 1771, 1774
PleI GAGTC 3 cut(s) 337, 709, 1081
PpsI GAGTC 3 cut(s) 337, 709, 1081
PpuMI RGGWCCY 2 cut(s) 244, 1318
Psp5II RGGWCCY 2 cut(s) 244, 1318
Psp6I CCWGG 1 cut(s) 261
PspFI CCCAGC 1 cut(s) 1314
PspGI CCWGG 1 cut(s) 261
PspN4I GGNNCC 5 cut(s) 158, 246, 447, 879, 1319
PspPI GGNCC 6 cut(s) 244, 259, 878, 949, 1061, 1318
PspPPI RGGWCCY 2 cut(s) 244, 1318
PsuI RGATCY 1 cut(s) 1397
PvuII CAGCTG 3 cut(s) 17, 937, 1376
RsaI GTAC 3 cut(s) 76, 749, 1382
RsaNI GTAC 3 cut(s) 75, 748, 1381
RseI CAYNNNNRTG 1 cut(s) 977
SaqAI TTAA 4 cut(s) 441, 834, 1095, 1686
SatI GCNGC 7 cut(s) 935, 1055, 1150, 1327, 1377, 1770, 1773
Sau3AI GATC 4 cut(s) 357, 755, 1144, 1397
Sau96I GGNCC 6 cut(s) 244, 259, 878, 949, 1061, 1318
SchI GAGTC 3 cut(s) 338, 710, 1082
ScrFI CCNGG 3 cut(s) 263, 1142, 1757
SduI GDGCHC 1 cut(s) 527
SfaNI GCATC 5 cut(s) 147, 754, 1080, 1204, 1688
SfcI CTRYAG 1 cut(s) 1422
SfuI TTCGAA 1 cut(s) 1185
SinI GGWCC 4 cut(s) 244, 878, 1061, 1318
SmiMI CAYNNNNRTG 1 cut(s) 977
SmlI CTYRAG 4 cut(s) 133, 440, 929, 1718
SmoI CTYRAG 4 cut(s) 133, 440, 929, 1718
Sse9I AATT 9 cut(s) 65, 115, 660, 872, 906, 1067, 1110, 1200, 1746
SsiI CCGC 6 cut(s) 644, 1190, 1256, 1395, 1770, 1773
SspMI CTAG 3 cut(s) 1287, 1463, 1505
StyD4I CCNGG 3 cut(s) 261, 1140, 1755
TaaI ACNGT 4 cut(s) 619, 752, 1265, 1426
TaiI ACGT 3 cut(s) 126, 585, 917
TaqI TCGA 4 cut(s) 417, 1185, 1293, 1484
TaqII GACCGA 1 cut(s) 857
TasI AATT 9 cut(s) 65, 115, 660, 872, 906, 1067, 1110, 1200, 1746
TatI WGTACW 1 cut(s) 747
TauI GCSGC 2 cut(s) 1772, 1775
TfiI GAWTC 7 cut(s) 85, 145, 289, 408, 850, 1298, 1643
Tru1I TTAA 4 cut(s) 441, 834, 1095, 1686
Tru9I TTAA 4 cut(s) 441, 834, 1095, 1686
TscAI CASTG 2 cut(s) 757, 1159
TseFI GTSAC 3 cut(s) 54, 712, 1751
TseI GCWGC 5 cut(s) 934, 1054, 1149, 1326, 1376
Tsp45I GTSAC 3 cut(s) 54, 712, 1751
TspDTI ATGAA 5 cut(s) 78, 137, 189, 1185, 1758
TspRI CASTG 2 cut(s) 757, 1159
Van91I CCANNNNNTGG 1 cut(s) 106
Vha464I CTTAAG 1 cut(s) 440
VpaK11BI GGWCC 4 cut(s) 244, 878, 1061, 1318
XapI RAATTY 6 cut(s) 65, 115, 660, 1067, 1200, 1746
XceI RCATGY 1 cut(s) 601
XmnI GAANNNNTTC 1 cut(s) 1409
XspI CTAG 3 cut(s) 1287, 1463, 1505
Zsp2I ATGCAT 1 cut(s) 1219
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.