FvH4_6g40321

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000030
Physical Location & Seq
Reverse (-)
31852753 .. 31855854
3102 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g40321.t1

Sequence Viewer

Length: 2001 bp
ATGGACGATAAGGATGCCGAGAGGAGGAAACGTGAGCCTGAGTATGCAAGGAATTCTGAATCAACGAAGAGAGCCTGTCATGAAGTAGTTTTCCATCTGGAGGAGACGCATATTGAAAAGAGGAAGAATGATGTGGACAGAGGCTGTGGAATTTCAACAGGATGTGACCCGAAAGCGTTTAAAGCTGTAGCGTCCCGAATATCGAATGAGAAGGTATTCCTGATTCAAGAATTGGGATTTGGGCCGGTGCGGCAGTTCCGGTGTAGTGAGTTAAATCTGTCGCTATGCAAAATGTTGTTGGACAATTTTAATGTTGAAAAATGTACGATCAAGATACACGGGCGAAACCTGACAGTTATGGAGAAGGACTTTGACCGGCTAATGGGATTGAGGTGTCGCGGCACAGAAGTATCCCTACCAAAGAGGGTCATCCATGATCCAGAAGTAGCGGATTTACAAGGTATAATTTGGGGGGTTGATAAAGAGATGAGTATTGACATATTGAGGAGGAATGTAGTGTTTTCAGACGATCCAGACAACTTGTTTGTGGTTAGTTTTGTATTGTTTGCGCTGGCTATCATGTATTGCCCCACCAGAGCAGGTTATGTAGATCCAAGGCTGTTATTATTGGTGAAGGACAGGAAGCAACAACAAACCCGGCCATGTTGGGGGCTGCCTTGTCTTCCTACAACTGTTCTATTTGAGTGTTATAGGGGAAAAAATGTTCATAATTCCAAAGAGTGTCCTCCGGTAATGACATGGGGGAGGAAAGAGTCGAACATGATATATGAAAGGGTTGAAGAGAAAGGAGGTTTTTACAAGAGTGATGGTATATGGGTAACGAAGAGATACTCAAGTGTTAGATCGACCGAGTTCTCGGGTTCCCGGGATTACAGCACGGGACTGAAAACAAATCTGGTGGACGACATGTCTGCAATGAGGTCTCACATTTCCACTGCAGAAGAGAAAGTTGGAGTTCTAGCGAATACCATGTACCGTATTGGTCCAGATATATCCAACCTGCGAGAGGCAATGACATTGTTACATGATTCAATGGTGAAGTTGAAGTCAGGAGATGTGACCGGCTTAGTGGATGAGGTGTTCAGAGCAGTCCGTTCAATTGAAGGTGGCAATGTTCATCCAGGGGAGGAGGAGGATGTGAACGCCCATATCTCGAAACCAGTCGGCCCTAACAGTGATGGTAAAGGGTCTCAGCCCTTTAATGGCAGTGGGGAGGCGAAGAAACAGAGGCGGCGTAAGTTTGGCACTGTGGCAAAACTATCCCCTTCAGACATGGATATGCTGAAGTATTTATCTAGCAAGAAGGGTCGTGCCGAGGACAGCCTAGGAAGTGTTGAAGTTGGGAGATTTAGAGAATTCAGCGTGTCTCGTTGGGACCTCCAGTGCCTCAGTCCCACGTGTTCAATTAGCAGCGAGGTGATCAACATCATGGGGGAATACTGTTTTGTGAATCGGGAGGATTGGTGGTTCCTCTCGACTTTATTTTCTGAGCGTGCAAAGGACTACTATGATTCTTATGCGGGAGTGCAGTCGTACGTATCAGCAACCATTAGCATGTGTAGGCTACGCAAATACTGCGGTCGTCTTAAAGCATGTAAAAAGATATTCATCCCTATTCTTGACGACGTTGTGGATCACTGGTTTCTTGTTGTTGCAAACATCACCGAAGGTGAATGTGAGATATGGGACTGCATCCCCGACCTCCCAGCGCAACAACGCCGCAAGAACATGGTTAACAACGTTATGAGTCTGCTGGGAGAAGTTTTTTCTTCTGAACTTGAAGTATCAGATCTAGCTCCATCAGCATTGTCCTCGTACAGTTTCACGTATCCTGAGAGCTCCCGAACTGTTCCTAACAAGTACGACTCTGGTATATTCACTATCAGACATGTCCAGTACTACCGAGAGCGGTGGTTCTCTGTGTTCAACTCTGCTGATGAGAGGATTAGGATCGCACTTGAGATTGTGAACAACCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

667

Amino Acids

75.85

Weight (kDa)

7.74

Isoelectric Point (pI)

50.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_C48 PF02902 535 - 642 6.8e-10 Ulp1 protease family, C-terminal catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 590, 1029
AccBSI CCGCTC 1 cut(s) 1930
AccII CGCG 1 cut(s) 399
AciI CCGC 8 cut(s) 250, 399, 449, 1252, 1541, 1599, 1741, 1930
AclI AACGTT 1 cut(s) 1761
AclWI GGATC 5 cut(s) 431, 524, 605, 1662, 1979
AcoI YGGCCR 1 cut(s) 659
AcsI RAATTY 3 cut(s) 52, 150, 1376
AcuI CTGAAG 2 cut(s) 1272, 1325
AcvI CACGTG 1 cut(s) 1419
AfaI GTAC 6 cut(s) 325, 995, 1556, 1838, 1883, 1919
AfiI CCNNNNNNNGG 6 cut(s) 24, 100, 382, 668, 1027, 1223
AflIII ACRYGT 3 cut(s) 927, 1418, 1909
AhdI GACNNNNNGTC 1 cut(s) 928
AjnI CCWGG 1 cut(s) 1141
AjuI GAANNNNNNNTTGG 4 cut(s) 222, 254, 954, 986
AloI GAACNNNNNNTCC 6 cut(s) 708, 740, 1085, 1117, 1472, 1504
AluBI AGCT 3 cut(s) 185, 1817, 1860
AluI AGCT 3 cut(s) 185, 1817, 1860
Alw21I GWGCWC 1 cut(s) 1862
Alw26I GTCTC 4 cut(s) 98, 948, 1215, 1392
AlwI GGATC 5 cut(s) 431, 524, 605, 1662, 1979
AlwNI CAGNNNCTG 1 cut(s) 144
Ama87I CYCGRG 2 cut(s) 877, 885
AoxI GGCC 3 cut(s) 242, 659, 1186
ApeKI GCWGC 2 cut(s) 673, 1431
ApoI RAATTY 3 cut(s) 52, 150, 1376
ArsI GACNNNNNNTTYG 2 cut(s) 527, 559
Asp700I GAANNNNTTC 1 cut(s) 215
AspA2I CCTAGG 1 cut(s) 1345
AspLEI GCGC 2 cut(s) 571, 1732
AspS9I GGNCC 4 cut(s) 242, 1004, 1187, 1396
AsuC2I CCSGG 3 cut(s) 658, 886, 887
AsuHPI GGTGA 5 cut(s) 643, 1069, 1450, 1675, 1703
AvaI CYCGRG 2 cut(s) 877, 885
AvaII GGWCC 2 cut(s) 1004, 1396
AvrII CCTAGG 1 cut(s) 1345
BaeI ACNNNNGTAYC 4 cut(s) 393, 426, 841, 874
BanII GRGCYC 1 cut(s) 1862
BarI GAAGNNNNNNTAC 2 cut(s) 399, 431
BbrPI CACGTG 1 cut(s) 1419
BbsI GAAGAC 1 cut(s) 674
Bbv12I GWGCWC 1 cut(s) 1862
BbvI GCAGC 2 cut(s) 660, 1443
BccI CCATC 4 cut(s) 102, 821, 1193, 1828
BcgI CGANNNNNNTGC 5 cut(s) 30, 914, 948, 1815, 1849
BciT130I CCWGG 1 cut(s) 1143
BciVI GTATCC 2 cut(s) 421, 1860
BclI TGATCA 1 cut(s) 1440
BcnI CCSGG 3 cut(s) 658, 886, 887
BcoDI GTCTC 4 cut(s) 98, 948, 1215, 1392
BfaI CTAG 4 cut(s) 980, 1317, 1346, 1814
BfmI CTRYAG 2 cut(s) 186, 957
BfuAI ACCTGC 2 cut(s) 590, 1029
BfuI GTATCC 2 cut(s) 421, 1860
BglI GCCNNNNNGGC 1 cut(s) 250
BglII AGATCT 1 cut(s) 1810
BisI GCNGC 6 cut(s) 251, 400, 674, 1253, 1432, 1741
BlnI CCTAGG 1 cut(s) 1345
BlsI GCNGC 6 cut(s) 252, 401, 675, 1254, 1433, 1742
BmcAI AGTACT 1 cut(s) 1919
Bme1390I CCNGG 4 cut(s) 658, 886, 887, 1143
Bme18I GGWCC 2 cut(s) 1004, 1396
BmeRI GACNNNNNGTC 1 cut(s) 928
BmeT110I CYCGRG 2 cut(s) 877, 885
BmgT120I GGNCC 4 cut(s) 242, 1004, 1187, 1396
BmiI GGNNCC 3 cut(s) 883, 1397, 1490
BmrFI CCNGG 4 cut(s) 658, 886, 887, 1143
BmsI GCATC 2 cut(s) 4, 1722
BpiI GAAGAC 1 cut(s) 674
BpmI CTGGAG 2 cut(s) 119, 1385
BpuEI CTTGAG 2 cut(s) 838, 2000
BpuMI CCSGG 3 cut(s) 658, 886, 887
BsaAI YACGTR 3 cut(s) 1419, 1558, 1848
BsaBI GATNNNNATC 3 cut(s) 1445, 1628, 1970
BsaI GGTCTC 2 cut(s) 948, 1215
BsaJI CCNNGG 5 cut(s) 614, 885, 1142, 1335, 1345
BsaWI WCCGGW 2 cut(s) 258, 748
BsaXI ACNNNNNCTCC 4 cut(s) 16, 46, 1469, 1499
Bsc4I CCNNNNNNNGG 6 cut(s) 24, 100, 382, 668, 1027, 1223
Bse118I RCCGGY 3 cut(s) 244, 375, 1082
Bse1I ACTGG 4 cut(s) 1181, 1402, 1664, 1915
Bse3DI GCAATG 3 cut(s) 942, 1038, 1138
Bse8I GATNNNNATC 3 cut(s) 1445, 1628, 1970
BseBI CCWGG 1 cut(s) 1143
BseDI CCNNGG 5 cut(s) 614, 885, 1142, 1335, 1345
BseGI GGATG 8 cut(s) 19, 167, 429, 1099, 1138, 1162, 1629, 1713
BseJI GATNNNNATC 3 cut(s) 1445, 1628, 1970
BseLI CCNNNNNNNGG 6 cut(s) 24, 100, 382, 668, 1027, 1223
BseMI GCAATG 3 cut(s) 942, 1038, 1138
BseMII CTCAG 5 cut(s) 30, 1226, 1423, 1500, 1845
BseNI ACTGG 4 cut(s) 1181, 1402, 1664, 1915
BseRI GAGGAG 5 cut(s) 37, 116, 520, 1163, 1166
BseXI GCAGC 2 cut(s) 660, 1443
BseYI CCCAGC 2 cut(s) 1726, 1774
BsgI GTGCAG 1 cut(s) 1568
Bsh1236I CGCG 1 cut(s) 399
Bsh1285I CGRYCG 2 cut(s) 870, 1603
BshFI GGCC 3 cut(s) 244, 661, 1188
BsiEI CGRYCG 2 cut(s) 870, 1603
BsiHKAI GWGCWC 1 cut(s) 1862
BsiHKCI CYCGRG 2 cut(s) 877, 885
BsiSI CCGG 7 cut(s) 245, 259, 376, 658, 749, 886, 1083
BsiWI CGTACG 1 cut(s) 1554
BslFI GGGAC 5 cut(s) 178, 915, 1398, 1409, 1721
BslI CCNNNNNNNGG 6 cut(s) 24, 100, 382, 668, 1027, 1223
BsmAI GTCTC 4 cut(s) 98, 948, 1215, 1392
BsmBI CGTCTC 1 cut(s) 98
BsmFI GGGAC 5 cut(s) 178, 915, 1398, 1409, 1721
BsnI GGCC 3 cut(s) 244, 661, 1188
Bso31I GGTCTC 2 cut(s) 948, 1215
BsoBI CYCGRG 2 cut(s) 877, 885
Bsp1286I GDGCHC 1 cut(s) 1862
Bsp143I GATC 9 cut(s) 327, 436, 529, 610, 863, 1440, 1654, 1810, 1971
BspACI CCGC 8 cut(s) 250, 399, 449, 1252, 1541, 1599, 1741, 1930
BspANI GGCC 3 cut(s) 244, 661, 1188
BspCNI CTCAG 5 cut(s) 31, 1225, 1422, 1501, 1846
BspFNI CGCG 1 cut(s) 399
BspHI TCATGA 1 cut(s) 79
BspLI GGNNCC 3 cut(s) 883, 1397, 1490
BspMAI CTGCAG 1 cut(s) 961
BspMI ACCTGC 2 cut(s) 590, 1029
BspPI GGATC 5 cut(s) 431, 524, 605, 1662, 1979
BspTNI GGTCTC 2 cut(s) 948, 1215
BsrBI CCGCTC 1 cut(s) 1930
BsrDI GCAATG 3 cut(s) 942, 1038, 1138
BsrFI RCCGGY 3 cut(s) 244, 375, 1082
BsrI ACTGG 4 cut(s) 1181, 1402, 1664, 1915
BssAI RCCGGY 3 cut(s) 244, 375, 1082
BssECI CCNNGG 5 cut(s) 614, 885, 1142, 1335, 1345
BssMI GATC 9 cut(s) 327, 436, 529, 610, 863, 1440, 1654, 1810, 1971
BssT1I CCWWGG 2 cut(s) 614, 1345
Bst2UI CCWGG 1 cut(s) 1143
Bst4CI ACNGT 8 cut(s) 355, 694, 998, 1196, 1270, 1463, 1841, 1870
Bst6I CTCTTC 4 cut(s) 62, 795, 839, 957
BstAPI GCANNNNNTGC 1 cut(s) 1596
BstBAI YACGTR 3 cut(s) 1419, 1558, 1848
BstC8I GCNNGC 2 cut(s) 573, 1515
BstDEI CTNAG 6 cut(s) 39, 1087, 1212, 1409, 1509, 1854
BstENI CCTNNNNNAGG 1 cut(s) 1025
BstF5I GGATG 8 cut(s) 19, 167, 429, 1099, 1138, 1162, 1629, 1713
BstFNI CGCG 1 cut(s) 399
BstHHI GCGC 2 cut(s) 571, 1732
BstKTI GATC 9 cut(s) 330, 439, 532, 613, 866, 1443, 1657, 1813, 1974
BstMAI GTCTC 4 cut(s) 98, 948, 1215, 1392
BstMBI GATC 9 cut(s) 327, 436, 529, 610, 863, 1440, 1654, 1810, 1971
BstMCI CGRYCG 2 cut(s) 870, 1603
BstMWI GCNNNNNNNGC 4 cut(s) 182, 250, 1596, 1823
BstNI CCWGG 1 cut(s) 1143
BstNSI RCATGY 4 cut(s) 931, 1579, 1617, 1913
BstSCI CCNGG 4 cut(s) 656, 884, 885, 1141
BstSFI CTRYAG 2 cut(s) 186, 957
BstSNI TACGTA 1 cut(s) 1558
BstUI CGCG 1 cut(s) 399
BstV1I GCAGC 2 cut(s) 660, 1443
BstV2I GAAGAC 1 cut(s) 674
BstX2I RGATCY 2 cut(s) 610, 1810
BstYI RGATCY 2 cut(s) 610, 1810
BsuI GTATCC 2 cut(s) 421, 1860
BsuRI GGCC 3 cut(s) 244, 661, 1188
BtsCI GGATG 8 cut(s) 19, 167, 429, 1099, 1138, 1162, 1629, 1713
BtsI GCAGTG 2 cut(s) 954, 1234
BtsIMutI CAGTG 6 cut(s) 954, 1201, 1234, 1266, 1409, 1657
BveI ACCTGC 2 cut(s) 590, 1029
Cac8I GCNNGC 2 cut(s) 573, 1515
CaiI CAGNNNCTG 1 cut(s) 144
CciI TCATGA 1 cut(s) 79
CfoI GCGC 2 cut(s) 571, 1732
Cfr10I RCCGGY 3 cut(s) 244, 375, 1082
Cfr13I GGNCC 4 cut(s) 242, 1004, 1187, 1396
Cfr9I CCCGGG 1 cut(s) 885
CseI GACGC 2 cut(s) 115, 180
Csp6I GTAC 6 cut(s) 324, 994, 1555, 1837, 1882, 1918
CspCI CAANNNNNGTGG 2 cut(s) 900, 935
CviQI GTAC 6 cut(s) 324, 994, 1555, 1837, 1882, 1918
DdeI CTNAG 6 cut(s) 39, 1087, 1212, 1409, 1509, 1854
DpnI GATC 9 cut(s) 329, 438, 531, 612, 865, 1442, 1656, 1812, 1973
DpnII GATC 9 cut(s) 327, 436, 529, 610, 863, 1440, 1654, 1810, 1971
DraI TTTAAA 1 cut(s) 181
DriI GACNNNNNGTC 1 cut(s) 928
EaeI YGGCCR 1 cut(s) 659
Eam1104I CTCTTC 4 cut(s) 62, 795, 839, 957
Eam1105I GACNNNNNGTC 1 cut(s) 928
EarI CTCTTC 4 cut(s) 62, 795, 839, 957
Ecl136II GAGCTC 1 cut(s) 1860
Eco105I TACGTA 1 cut(s) 1558
Eco130I CCWWGG 2 cut(s) 614, 1345
Eco24I GRGCYC 1 cut(s) 1862
Eco31I GGTCTC 2 cut(s) 948, 1215
Eco47I GGWCC 2 cut(s) 1004, 1396
Eco53kI GAGCTC 1 cut(s) 1860
Eco57I CTGAAG 2 cut(s) 1272, 1325
Eco72I CACGTG 1 cut(s) 1419
Eco88I CYCGRG 2 cut(s) 877, 885
EcoICRI GAGCTC 1 cut(s) 1860
EcoNI CCTNNNNNAGG 1 cut(s) 1025
EcoO109I RGGNCCY 1 cut(s) 1396
EcoRI GAATTC 2 cut(s) 52, 1376
EcoRII CCWGG 1 cut(s) 1141
EcoT14I CCWWGG 2 cut(s) 614, 1345
EcoT38I GRGCYC 1 cut(s) 1862
ErhI CCWWGG 2 cut(s) 614, 1345
Esp3I CGTCTC 1 cut(s) 98
FaqI GGGAC 5 cut(s) 178, 915, 1398, 1409, 1721
FauI CCCGC 1 cut(s) 1534
FbaI TGATCA 1 cut(s) 1440
Fnu4HI GCNGC 6 cut(s) 251, 400, 674, 1253, 1432, 1741
FokI GGATG 8 cut(s) 26, 174, 416, 1106, 1125, 1169, 1616, 1700
FriOI GRGCYC 1 cut(s) 1862
Fsp4HI GCNGC 6 cut(s) 251, 400, 674, 1253, 1432, 1741
FspBI CTAG 4 cut(s) 980, 1317, 1346, 1814
GlaI GCGC 2 cut(s) 570, 1731
GluI GCNGC 6 cut(s) 251, 400, 674, 1253, 1432, 1741
GsaI CCCAGC 2 cut(s) 1730, 1778
GsuI CTGGAG 2 cut(s) 119, 1385
HaeIII GGCC 3 cut(s) 244, 661, 1188
HapII CCGG 7 cut(s) 245, 259, 376, 658, 749, 886, 1083
HgaI GACGC 2 cut(s) 115, 180
HhaI GCGC 2 cut(s) 571, 1732
Hin6I GCGC 2 cut(s) 569, 1730
HinP1I GCGC 2 cut(s) 569, 1730
HincII GTYRAC 1 cut(s) 1756
HindII GTYRAC 1 cut(s) 1756
HinfI GANTC 8 cut(s) 59, 223, 773, 1049, 1471, 1532, 1768, 1886
HpaI GTTAAC 1 cut(s) 1756
HpaII CCGG 7 cut(s) 245, 259, 376, 658, 749, 886, 1083
HphI GGTGA 5 cut(s) 643, 1069, 1450, 1675, 1703
Hpy166II GTNNAC 5 cut(s) 136, 922, 1162, 1756, 1990
Hpy188I TCNGA 8 cut(s) 58, 526, 1106, 1291, 1510, 1795, 1810, 1907
Hpy8I GTNNAC 5 cut(s) 136, 922, 1162, 1756, 1990
Hpy99I CGWCG 1 cut(s) 1649
HpyAV CCTTC 7 cut(s) 205, 358, 628, 1118, 1296, 1318, 1682
HpyCH4III ACNGT 8 cut(s) 355, 694, 998, 1196, 1270, 1463, 1841, 1870
HpyCH4IV ACGT 6 cut(s) 31, 1418, 1557, 1647, 1761, 1847
HpyCH4V TGCA 8 cut(s) 47, 288, 935, 959, 1517, 1549, 1676, 1713
HpyF10VI GCNNNNNNNGC 4 cut(s) 182, 250, 1596, 1823
HpyF3I CTNAG 6 cut(s) 39, 1087, 1212, 1409, 1509, 1854
HpySE526I ACGT 6 cut(s) 31, 1418, 1557, 1647, 1761, 1847
HspAI GCGC 2 cut(s) 569, 1730
Ksp22I TGATCA 1 cut(s) 1440
KspAI GTTAAC 1 cut(s) 1756
Kzo9I GATC 9 cut(s) 327, 436, 529, 610, 863, 1440, 1654, 1810, 1971
LmnI GCTCC 2 cut(s) 1822, 1865
Lsp1109I GCAGC 2 cut(s) 660, 1443
LweI GCATC 2 cut(s) 4, 1722
MaeI CTAG 4 cut(s) 980, 1317, 1346, 1814
MaeII ACGT 6 cut(s) 31, 1418, 1557, 1647, 1761, 1847
MaeIII GTNAC 4 cut(s) 164, 838, 1041, 1078
MalI GATC 9 cut(s) 329, 438, 531, 612, 865, 1442, 1656, 1812, 1973
MbiI CCGCTC 1 cut(s) 1930
MboI GATC 9 cut(s) 327, 436, 529, 610, 863, 1440, 1654, 1810, 1971
MboII GAAGA 8 cut(s) 79, 136, 674, 812, 856, 974, 1252, 1782
MfeI CAATTG 1 cut(s) 1119
MflI RGATCY 2 cut(s) 610, 1810
MhlI GDGCHC 1 cut(s) 1862
MluCI AATT 9 cut(s) 52, 150, 230, 304, 465, 730, 1119, 1376, 1425
MlyI GAGTC 3 cut(s) 782, 1777, 1880
MmeI TCCRAC 3 cut(s) 279, 952, 1041
MroXI GAANNNNTTC 1 cut(s) 215
MseI TTAA 6 cut(s) 180, 272, 309, 1221, 1608, 1755
MslI CAYNNNNRTG 2 cut(s) 1298, 1574
MspI CCGG 7 cut(s) 245, 259, 376, 658, 749, 886, 1083
MspR9I CCNGG 4 cut(s) 658, 886, 887, 1143
MunI CAATTG 1 cut(s) 1119
MvaI CCWGG 1 cut(s) 1143
MvnI CGCG 1 cut(s) 399
MwoI GCNNNNNNNGC 4 cut(s) 182, 250, 1596, 1823
NciI CCSGG 3 cut(s) 658, 886, 887
NdeII GATC 9 cut(s) 327, 436, 529, 610, 863, 1440, 1654, 1810, 1971
NlaIV GGNNCC 3 cut(s) 883, 1397, 1490
NmeAIII GCCGAG 2 cut(s) 43, 1360
NmuCI GTSAC 2 cut(s) 164, 1078
NspI RCATGY 4 cut(s) 931, 1579, 1617, 1913
PagI TCATGA 1 cut(s) 79
PciI ACATGT 2 cut(s) 927, 1909
PdmI GAANNNNTTC 1 cut(s) 215
PfeI GAWTC 5 cut(s) 59, 223, 1049, 1471, 1532
Pfl23II CGTACG 1 cut(s) 1554
PkrI GCNGC 6 cut(s) 252, 401, 675, 1254, 1433, 1742
PleI GAGTC 3 cut(s) 781, 1776, 1880
PmaCI CACGTG 1 cut(s) 1419
PmlI CACGTG 1 cut(s) 1419
PpsI GAGTC 3 cut(s) 781, 1776, 1880
Ppu21I YACGTR 3 cut(s) 1419, 1558, 1848
PpuMI RGGWCCY 1 cut(s) 1396
PscI ACATGT 2 cut(s) 927, 1909
Psp124BI GAGCTC 1 cut(s) 1862
Psp1406I AACGTT 1 cut(s) 1761
Psp5II RGGWCCY 1 cut(s) 1396
Psp6I CCWGG 1 cut(s) 1141
PspCI CACGTG 1 cut(s) 1419
PspFI CCCAGC 2 cut(s) 1726, 1774
PspGI CCWGG 1 cut(s) 1141
PspLI CGTACG 1 cut(s) 1554
PspN4I GGNNCC 3 cut(s) 883, 1397, 1490
PspPI GGNCC 4 cut(s) 242, 1004, 1187, 1396
PspPPI RGGWCCY 1 cut(s) 1396
PstI CTGCAG 1 cut(s) 961
PstNI CAGNNNCTG 1 cut(s) 144
PsuI RGATCY 2 cut(s) 610, 1810
RsaI GTAC 6 cut(s) 325, 995, 1556, 1838, 1883, 1919
RsaNI GTAC 6 cut(s) 324, 994, 1555, 1837, 1882, 1918
RseI CAYNNNNRTG 2 cut(s) 1298, 1574
SacI GAGCTC 1 cut(s) 1862
SaqAI TTAA 6 cut(s) 180, 272, 309, 1221, 1608, 1755
SatI GCNGC 6 cut(s) 251, 400, 674, 1253, 1432, 1741
Sau3AI GATC 9 cut(s) 327, 436, 529, 610, 863, 1440, 1654, 1810, 1971
Sau96I GGNCC 4 cut(s) 242, 1004, 1187, 1396
ScaI AGTACT 1 cut(s) 1919
SchI GAGTC 3 cut(s) 782, 1777, 1880
ScrFI CCNGG 4 cut(s) 658, 886, 887, 1143
SduI GDGCHC 1 cut(s) 1862
SfaNI GCATC 2 cut(s) 4, 1722
SfcI CTRYAG 2 cut(s) 186, 957
SinI GGWCC 2 cut(s) 1004, 1396
SmaI CCCGGG 1 cut(s) 887
SmiMI CAYNNNNRTG 2 cut(s) 1298, 1574
SmlI CTYRAG 2 cut(s) 853, 1979
SmoI CTYRAG 2 cut(s) 853, 1979
SnaBI TACGTA 1 cut(s) 1558
Sse9I AATT 9 cut(s) 52, 150, 230, 304, 465, 730, 1119, 1376, 1425
SsiI CCGC 8 cut(s) 250, 399, 449, 1252, 1541, 1599, 1741, 1930
SspMI CTAG 4 cut(s) 980, 1317, 1346, 1814
SstI GAGCTC 1 cut(s) 1862
StyD4I CCNGG 4 cut(s) 656, 884, 885, 1141
StyI CCWWGG 2 cut(s) 614, 1345
TaaI ACNGT 8 cut(s) 355, 694, 998, 1196, 1270, 1463, 1841, 1870
TaiI ACGT 6 cut(s) 34, 1421, 1560, 1650, 1764, 1850
TaqI TCGA 5 cut(s) 203, 776, 866, 1175, 1496
TaqII GACCGA 1 cut(s) 884
TasI AATT 9 cut(s) 52, 150, 230, 304, 465, 730, 1119, 1376, 1425
TatI WGTACW 1 cut(s) 1917
TauI GCSGC 4 cut(s) 253, 402, 1255, 1743
TfiI GAWTC 5 cut(s) 59, 223, 1049, 1471, 1532
Tru1I TTAA 6 cut(s) 180, 272, 309, 1221, 1608, 1755
Tru9I TTAA 6 cut(s) 180, 272, 309, 1221, 1608, 1755
TscAI CASTG 6 cut(s) 961, 1201, 1234, 1273, 1409, 1664
TseFI GTSAC 2 cut(s) 164, 1078
TseI GCWGC 2 cut(s) 673, 1431
Tsp45I GTSAC 2 cut(s) 164, 1078
TspDTI ATGAA 5 cut(s) 96, 716, 804, 1127, 1618
TspGWI ACGGA 1 cut(s) 1103
TspMI CCCGGG 1 cut(s) 885
TspRI CASTG 6 cut(s) 961, 1201, 1234, 1273, 1409, 1664
VpaK11BI GGWCC 2 cut(s) 1004, 1396
XagI CCTNNNNNAGG 1 cut(s) 1025
XapI RAATTY 3 cut(s) 52, 150, 1376
XceI RCATGY 4 cut(s) 931, 1579, 1617, 1913
XmaI CCCGGG 1 cut(s) 885
XmaJI CCTAGG 1 cut(s) 1345
XmnI GAANNNNTTC 1 cut(s) 215
XspI CTAG 4 cut(s) 980, 1317, 1346, 1814
ZrmI AGTACT 1 cut(s) 1919
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.