RLG00000030439

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000030
Physical Location & Seq
Forward (+)
61480457 .. 61484072
3616 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030439

Sequence Viewer

Length: 2307 bp
ATGGAAGGGAAGGCCATCTCCTTGAAAAGTTTGCAATGGGAGGCATCATGGGGGATAAGGGCTCAGCCTCATATTGACTTCATCAACACAGTCCGGGCCCTTCCCATCGATAAGATTTCAGCTATATGGGAGATGGGTTTTGGTTCACTTCAGAGTATAGGATGCCCTCAACTACATGACCAAGTATGGAAAATGATGGTCGATGGCCTTGAACCTCTGAATGAAACAGTGGTTATACATGGAAAGACTTTCAGCATACATGCATCTGATTTTGAGAGTATTATGGGAGTCAGAGACGGGGGACTTGATGTAGGTTTTAGTGGAGATAGTAACACAGCGGTTGTCGCACATGTCAAACAAGAGTTAGCTGGTTTAGATGGGAACATAACATTATCCTCGTTGAAGGAGGTAGTTCTTCGAAGGGTGGATGTGGACCAAATATTTAGAGTGGCCTACGTATTGTACGCAATGTCGGCCTTATTGTGCCCAACCAATAGTGAAGTGGTCGACTACATATTGCTTATGGCCATGATAACAAGCAGGTCGATAGGGGATCTTAATTGGGCCACATATTGCTTCAGCAAGTTGATGGATGGTGTACTCACAAGGTTGCGCAACGACGATACCATTGGCGGTGCATGTTTCTTGTTCCTCCAAGTGTTTTACTTTGAAGCCGTTGGGACAAGTTTGGGATGGGTTGACAAGACAATCACACCAGTCATATACTGGGGAGTTGACAAGGCCGCAAATTTGGTGCAGTTCGTTAAGAATAATGGAGGCGTTACCTCAGAAAATAACAGAGTCTGGGCACATGAGATAGGTGGCACTTGGATGAAAAAGAATGCTGAGAACTATGAAGGTGGGATAACAGTGGAGGAGACAGTTTTTGCACAGGTGGAGGAGATGTGGTCAGAGATAGAAAGTGTGAAAAATATTGATGTGCACTATATGAAGGAAAACATAGCTCTTATTGCAAAATTGGCTGAAATGATTGAAGGAGTTCGAACTGAGATTTTGTCAGCTAGGAAGGAAACCGTGACCGCTGCTGCCGCAGAGGTATTCAAACAATACAAACCCCAATTAGATCATATGCTTGGTGTGAGACCTAAAGTCATGGAGAGAGCAATAACAGAGGCAAGGAGTAACAGCGCACACTTCAATGGGGGAAAGAATTCTAAATCTAAAGGGGATAATTCACAGGATTCAAGTTGCATGATCTTATATTGCAATAATGTCAATGCACAGACAATACATAATGATCAGGTCAAGGTGAACGGGAACAATGGAAAAGAACTTCAACCAACTCTATCTGATTGTTCAGTGAGCCCCATTGAGGGTCCAAAGGCTATGCGTAGGAGCAGTAAGGAGAAAAATAAAAAGATACCAACTGTGGCACCTAGGCACATTGTTCGTGCACTATTTAAGAAGAGTGCAATTCCGGGTAGAAAGAAGTCACATTTGAAGGGGTGGGGGAAGGGGACTATTGATGCCGGCCCATTCCGTGTCAATCGGGGTACTTCTAAGGACGACATGGATCTTTTGAAGTTTATATTTATGGATATGGAGCAGAATGATTTGGATTACCGTGCCGTAGTTGCGAGTGTCGAAGGAATGCACGTCACAAGGACTGATCTTCAATGCCTCGGTCCAAGGGAGCTTGTCTGCAGCCTTGTTATAAATATATTTGTGGAGTACCTTAACGAAATAGGAAAGGATGATTGGTATGTCCCAACATACTTCGGGAGAAACTCTATAAAAATGGGAGACAACATGTCAACTCAAGAATGGATTCAACAGACTAAAAGACTAAGTAGGCTTGACAGATTCATTGGCCATTTTGCCAAATGCAGAAGGATTTTTATCCCAATGCACGAGCCAGGAATACAAGAGAAGGATGCACATTGGTATTTGTTGGTGGTGCATGTCAGAGATAGGTCTGCAGAGATCCTTGATAGTGCTCCAAATCCTTCCAAAACAATATCCCGGCAAAGAGATGCACGGGCAACGTTGGACATGCTGGATCGCATTTATGGCGACGCTATGTCGAGACATGCAAATCGGTTGTTTGCTTTCGGAACCCTTCCCTTCAAGGCTGATGGAGCTGGACTTCGACAGAAGAATGATACAGACTGCGGTGTTTTTGTCATTAGGAATATGCAGCGATATGGTACCGATTGGGCTGCTACGTACAAATCTGATATTGAACGTGCAAGTTTGGTGGTCGAGTGTCTAAGGCATCCGAAGAATGAGGTGGGAGACTTGCATGTGAAAGTGGACAGATGCTTAGCTCGCATCTCAGGGAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

769

Amino Acids

86.15

Weight (kDa)

8.09

Isoelectric Point (pI)

38.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_C48 PF02902 592 - 722 5.2e-12 Ulp1 protease family, C-terminal catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1676
Acc16I TGCGCA 1 cut(s) 614
Acc36I ACCTGC 1 cut(s) 531
Acc65I GGTACC 1 cut(s) 2168
AccB1I GGYRCC 2 cut(s) 1393, 2168
AccI GTMKAC 1 cut(s) 507
AciI CCGC 6 cut(s) 338, 633, 744, 1041, 1050, 2133
AclI AACGTT 1 cut(s) 2006
AclWI GGATC 4 cut(s) 561, 1542, 1939, 2028
AcoI YGGCCR 2 cut(s) 525, 1831
AcsI RAATTY 2 cut(s) 748, 1171
AcuI CTGAAG 2 cut(s) 134, 562
AfaI GTAC 6 cut(s) 464, 600, 1516, 1694, 2170, 2189
AfiI CCNNNNNNNGG 2 cut(s) 1333, 1334
AflIII ACRYGT 2 cut(s) 349, 1770
AhdI GACNNNNNGTC 3 cut(s) 1109, 1771, 2041
AjiI CACGTC 1 cut(s) 1618
AjnI CCWGG 1 cut(s) 1876
AjuI GAANNNNNNNTTGG 2 cut(s) 1702, 1734
AluBI AGCT 7 cut(s) 122, 368, 965, 1022, 1657, 2102, 2288
AluI AGCT 7 cut(s) 122, 368, 965, 1022, 1657, 2102, 2288
Alw21I GWGCWC 3 cut(s) 945, 1417, 1960
Alw26I GTCTC 6 cut(s) 288, 872, 1096, 1758, 2041, 2250
Alw44I GTGCAC 2 cut(s) 941, 1413
AlwI GGATC 4 cut(s) 561, 1542, 1939, 2028
AlwNI CAGNNNCTG 1 cut(s) 804
ApaI GGGCCC 1 cut(s) 100
ApaLI GTGCAC 2 cut(s) 941, 1413
ApeKI GCWGC 5 cut(s) 1043, 1046, 1665, 2158, 2180
ApoI RAATTY 2 cut(s) 748, 1171
Asp700I GAANNNNTTC 3 cut(s) 999, 1171, 1788
Asp718I GGTACC 1 cut(s) 2168
AspA2I CCTAGG 1 cut(s) 1397
AspLEI GCGC 2 cut(s) 615, 1151
AspS9I GGNCC 7 cut(s) 96, 97, 433, 564, 1337, 1493, 1646
AsuC2I CCSGG 3 cut(s) 95, 1440, 1984
AsuHPI GGTGA 1 cut(s) 1282
AsuII TTCGAA 2 cut(s) 418, 1003
AvaII GGWCC 3 cut(s) 433, 1337, 1646
AvrII CCTAGG 1 cut(s) 1397
BaeGI GKGCMC 5 cut(s) 100, 488, 811, 945, 1417
BalI TGGCCA 2 cut(s) 527, 1833
BanI GGYRCC 2 cut(s) 1393, 2168
BanII GRGCYC 3 cut(s) 64, 100, 1328
BauI CACGAG 1 cut(s) 1871
Bbv12I GWGCWC 3 cut(s) 945, 1417, 1960
BbvI GCAGC 5 cut(s) 1030, 1033, 1677, 2167, 2170
BceAI ACGGC 2 cut(s) 659, 1574
BcgI CGANNNNNNTGC 4 cut(s) 1391, 1425, 2162, 2196
BciT130I CCWGG 1 cut(s) 1878
BclI TGATCA 1 cut(s) 1258
BcnI CCSGG 3 cut(s) 95, 1440, 1984
BcoDI GTCTC 6 cut(s) 288, 872, 1096, 1758, 2041, 2250
BfaI CTAG 2 cut(s) 1023, 1398
BfmI CTRYAG 2 cut(s) 1663, 1938
BfuAI ACCTGC 1 cut(s) 531
BisI GCNGC 7 cut(s) 744, 1044, 1047, 1050, 1666, 2159, 2181
BlnI CCTAGG 1 cut(s) 1397
BlpI GCTNAGC 2 cut(s) 63, 2284
BlsI GCNGC 7 cut(s) 745, 1045, 1048, 1051, 1667, 2160, 2182
Bme1390I CCNGG 4 cut(s) 95, 1440, 1878, 1984
Bme18I GGWCC 3 cut(s) 433, 1337, 1646
BmeRI GACNNNNNGTC 3 cut(s) 1109, 1771, 2041
BmgBI CACGTC 1 cut(s) 1618
BmgT120I GGNCC 7 cut(s) 96, 97, 433, 564, 1337, 1493, 1646
BmiI GGNNCC 5 cut(s) 98, 1338, 1395, 2077, 2170
BmrFI CCNGG 4 cut(s) 95, 1440, 1878, 1984
BmrI ACTGGG 1 cut(s) 736
BmsI GCATC 9 cut(s) 53, 152, 272, 1477, 1885, 1984, 2245, 2270, 2301
BmuI ACTGGG 1 cut(s) 736
Bpu1102I GCTNAGC 2 cut(s) 63, 2284
Bpu14I TTCGAA 2 cut(s) 418, 1003
BpuEI CTTGAG 1 cut(s) 1764
BpuMI CCSGG 3 cut(s) 95, 1440, 1984
Bsa29I ATCGAT 1 cut(s) 108
BsaAI YACGTR 2 cut(s) 457, 2187
BsaBI GATNNNNATC 1 cut(s) 1859
BsaI GGTCTC 1 cut(s) 1096
BsaJI CCNNGG 3 cut(s) 1397, 1642, 1649
BsaXI ACNNNNNCTCC 4 cut(s) 890, 893, 920, 923
Bsc4I CCNNNNNNNGG 2 cut(s) 1333, 1334
Bse118I RCCGGY 1 cut(s) 1490
Bse1I ACTGG 2 cut(s) 716, 731
Bse3DI GCAATG 2 cut(s) 41, 474
Bse8I GATNNNNATC 1 cut(s) 1859
BseBI CCWGG 1 cut(s) 1878
BseCI ATCGAT 1 cut(s) 108
BseDI CCNNGG 3 cut(s) 1397, 1642, 1649
BseGI GGATG 8 cut(s) 167, 433, 598, 698, 837, 1720, 1900, 2236
BseJI GATNNNNATC 1 cut(s) 1859
BseLI CCNNNNNNNGG 2 cut(s) 1333, 1334
BseMI GCAATG 2 cut(s) 41, 474
BseMII CTCAG 4 cut(s) 77, 801, 837, 999
BseNI ACTGG 2 cut(s) 716, 731
BseRI GAGGAG 2 cut(s) 890, 914
BseSI GKGCMC 5 cut(s) 100, 488, 811, 945, 1417
BseXI GCAGC 5 cut(s) 1030, 1033, 1677, 2167, 2170
BsgI GTGCAG 1 cut(s) 776
BshNI GGYRCC 2 cut(s) 1393, 2168
BshVI ATCGAT 1 cut(s) 108
BsiHKAI GWGCWC 3 cut(s) 945, 1417, 1960
BsiSI CCGG 4 cut(s) 94, 1439, 1491, 1984
BslFI GGGAC 4 cut(s) 315, 694, 1492, 1712
BslI CCNNNNNNNGG 2 cut(s) 1333, 1334
BsmAI GTCTC 6 cut(s) 288, 872, 1096, 1758, 2041, 2250
BsmBI CGTCTC 1 cut(s) 288
BsmFI GGGAC 4 cut(s) 315, 694, 1492, 1712
BsmI GAATGC 2 cut(s) 847, 1617
Bso31I GGTCTC 1 cut(s) 1096
Bsp119I TTCGAA 2 cut(s) 418, 1003
Bsp120I GGGCCC 1 cut(s) 96
Bsp1286I GDGCHC 8 cut(s) 64, 100, 488, 811, 945, 1328, 1417, 1960
Bsp143I GATC 8 cut(s) 553, 1084, 1215, 1258, 1534, 1630, 1944, 2020
Bsp1720I GCTNAGC 2 cut(s) 63, 2284
BspACI CCGC 6 cut(s) 338, 633, 744, 1041, 1050, 2133
BspCNI CTCAG 4 cut(s) 76, 800, 838, 1000
BspDI ATCGAT 1 cut(s) 108
BspLI GGNNCC 5 cut(s) 98, 1338, 1395, 2077, 2170
BspMAI CTGCAG 2 cut(s) 1667, 1942
BspMI ACCTGC 1 cut(s) 531
BspPI GGATC 4 cut(s) 561, 1542, 1939, 2028
BspT104I TTCGAA 2 cut(s) 418, 1003
BspT107I GGYRCC 2 cut(s) 1393, 2168
BspTNI GGTCTC 1 cut(s) 1096
BsrDI GCAATG 2 cut(s) 41, 474
BsrFI RCCGGY 1 cut(s) 1490
BsrI ACTGG 2 cut(s) 716, 731
BssAI RCCGGY 1 cut(s) 1490
BssECI CCNNGG 3 cut(s) 1397, 1642, 1649
BssMI GATC 8 cut(s) 553, 1084, 1215, 1258, 1534, 1630, 1944, 2020
BssSI CACGAG 1 cut(s) 1871
BssT1I CCWWGG 2 cut(s) 1397, 1649
Bst2BI CACGAG 1 cut(s) 1871
Bst2UI CCWGG 1 cut(s) 1878
Bst4CI ACNGT 7 cut(s) 91, 229, 871, 883, 1036, 1390, 1586
Bst6I CTCTTC 1 cut(s) 1421
BstBAI YACGTR 2 cut(s) 457, 2187
BstBI TTCGAA 2 cut(s) 418, 1003
BstC8I GCNNGC 2 cut(s) 1492, 2290
BstDEI CTNAG 9 cut(s) 63, 787, 846, 1008, 1521, 1808, 2231, 2284, 2296
BstF5I GGATG 8 cut(s) 167, 433, 598, 698, 837, 1720, 1900, 2236
BstHHI GCGC 2 cut(s) 615, 1151
BstKTI GATC 8 cut(s) 556, 1087, 1218, 1261, 1537, 1633, 1947, 2023
BstMAI GTCTC 6 cut(s) 288, 872, 1096, 1758, 2041, 2250
BstMBI GATC 8 cut(s) 553, 1084, 1215, 1258, 1534, 1630, 1944, 2020
BstMWI GCNNNNNNNGC 9 cut(s) 344, 473, 971, 980, 1049, 1595, 2031, 2099, 2289
BstNI CCWGG 1 cut(s) 1878
BstNSI RCATGY 8 cut(s) 263, 353, 642, 1774, 1925, 2017, 2054, 2267
BstSCI CCNGG 4 cut(s) 93, 1438, 1876, 1982
BstSFI CTRYAG 2 cut(s) 1663, 1938
BstSLI GKGCMC 5 cut(s) 100, 488, 811, 945, 1417
BstSNI TACGTA 2 cut(s) 457, 2187
BstV1I GCAGC 5 cut(s) 1030, 1033, 1677, 2167, 2170
BstX2I RGATCY 3 cut(s) 553, 1534, 1944
BstYI RGATCY 3 cut(s) 553, 1534, 1944
Bsu15I ATCGAT 1 cut(s) 108
BsuTUI ATCGAT 1 cut(s) 108
BtrI CACGTC 1 cut(s) 1618
BtsCI GGATG 8 cut(s) 167, 433, 598, 698, 837, 1720, 1900, 2236
BtsIMutI CAGTG 3 cut(s) 234, 876, 1326
BveI ACCTGC 1 cut(s) 531
Cac8I GCNNGC 2 cut(s) 1492, 2290
CaiI CAGNNNCTG 1 cut(s) 804
CfoI GCGC 2 cut(s) 615, 1151
Cfr10I RCCGGY 1 cut(s) 1490
Cfr13I GGNCC 7 cut(s) 96, 97, 433, 564, 1337, 1493, 1646
ClaI ATCGAT 1 cut(s) 108
CseI GACGC 1 cut(s) 2045
Csp6I GTAC 6 cut(s) 463, 599, 1515, 1693, 2169, 2188
CspCI CAANNNNNGTGG 2 cut(s) 2199, 2234
CviQI GTAC 6 cut(s) 463, 599, 1515, 1693, 2169, 2188
DdeI CTNAG 9 cut(s) 63, 787, 846, 1008, 1521, 1808, 2231, 2284, 2296
DpnI GATC 8 cut(s) 555, 1086, 1217, 1260, 1536, 1632, 1946, 2022
DpnII GATC 8 cut(s) 553, 1084, 1215, 1258, 1534, 1630, 1944, 2020
DriI GACNNNNNGTC 3 cut(s) 1109, 1771, 2041
EaeI YGGCCR 2 cut(s) 525, 1831
Eam1104I CTCTTC 1 cut(s) 1421
Eam1105I GACNNNNNGTC 3 cut(s) 1109, 1771, 2041
EarI CTCTTC 1 cut(s) 1421
Eco105I TACGTA 2 cut(s) 457, 2187
Eco130I CCWWGG 2 cut(s) 1397, 1649
Eco24I GRGCYC 3 cut(s) 64, 100, 1328
Eco31I GGTCTC 1 cut(s) 1096
Eco47I GGWCC 3 cut(s) 433, 1337, 1646
Eco57I CTGAAG 2 cut(s) 134, 562
EcoO109I RGGNCCY 1 cut(s) 97
EcoRI GAATTC 1 cut(s) 1171
EcoRII CCWGG 1 cut(s) 1876
EcoT14I CCWWGG 2 cut(s) 1397, 1649
EcoT22I ATGCAT 1 cut(s) 265
EcoT38I GRGCYC 3 cut(s) 64, 100, 1328
ErhI CCWWGG 2 cut(s) 1397, 1649
Esp3I CGTCTC 1 cut(s) 288
FaqI GGGAC 4 cut(s) 315, 694, 1492, 1712
FauNDI CATATG 1 cut(s) 1089
FbaI TGATCA 1 cut(s) 1258
FblI GTMKAC 1 cut(s) 507
Fnu4HI GCNGC 7 cut(s) 744, 1044, 1047, 1050, 1666, 2159, 2181
FokI GGATG 8 cut(s) 174, 440, 605, 705, 844, 1727, 1907, 2223
FriOI GRGCYC 3 cut(s) 64, 100, 1328
Fsp4HI GCNGC 7 cut(s) 744, 1044, 1047, 1050, 1666, 2159, 2181
FspBI CTAG 2 cut(s) 1023, 1398
FspI TGCGCA 1 cut(s) 614
GlaI GCGC 2 cut(s) 614, 1150
GluI GCNGC 7 cut(s) 744, 1044, 1047, 1050, 1666, 2159, 2181
HapII CCGG 4 cut(s) 94, 1439, 1491, 1984
HgaI GACGC 1 cut(s) 2045
HhaI GCGC 2 cut(s) 615, 1151
Hin6I GCGC 2 cut(s) 613, 1149
HinP1I GCGC 2 cut(s) 613, 1149
HincII GTYRAC 4 cut(s) 508, 700, 736, 1776
HindII GTYRAC 4 cut(s) 508, 700, 736, 1776
HinfI GANTC 5 cut(s) 288, 801, 1202, 1789, 1824
HpaII CCGG 4 cut(s) 94, 1439, 1491, 1984
HphI GGTGA 1 cut(s) 1282
Hpy188III TCNNGA 3 cut(s) 1741, 1781, 2046
Hpy99I CGWCG 2 cut(s) 623, 2039
HpyCH4III ACNGT 7 cut(s) 91, 229, 871, 883, 1036, 1390, 1586
HpyCH4IV ACGT 5 cut(s) 456, 1617, 2006, 2186, 2206
HpyF10VI GCNNNNNNNGC 9 cut(s) 344, 473, 971, 980, 1049, 1595, 2031, 2099, 2289
HpyF3I CTNAG 9 cut(s) 63, 787, 846, 1008, 1521, 1808, 2231, 2284, 2296
HpySE526I ACGT 5 cut(s) 456, 1617, 2006, 2186, 2206
HspAI GCGC 2 cut(s) 613, 1149
KpnI GGTACC 1 cut(s) 2172
KroI GCCGGC 1 cut(s) 1490
KroNI GCCGGC 1 cut(s) 1492
Ksp22I TGATCA 1 cut(s) 1258
Kzo9I GATC 8 cut(s) 553, 1084, 1215, 1258, 1534, 1630, 1944, 2020
LmnI GCTCC 5 cut(s) 1356, 1564, 1654, 1963, 2099
Lsp1109I GCAGC 5 cut(s) 1030, 1033, 1677, 2167, 2170
LweI GCATC 9 cut(s) 53, 152, 272, 1477, 1885, 1984, 2245, 2270, 2301
MaeI CTAG 2 cut(s) 1023, 1398
MaeII ACGT 5 cut(s) 456, 1617, 2006, 2186, 2206
MaeIII GTNAC 6 cut(s) 329, 781, 1036, 1142, 1452, 1618
MalI GATC 8 cut(s) 555, 1086, 1217, 1260, 1536, 1632, 1946, 2022
MboI GATC 8 cut(s) 553, 1084, 1215, 1258, 1534, 1630, 1944, 2020
MboII GAAGA 5 cut(s) 407, 1438, 1625, 2128, 2254
MflI RGATCY 3 cut(s) 553, 1534, 1944
MhlI GDGCHC 8 cut(s) 64, 100, 488, 811, 945, 1328, 1417, 1960
MlsI TGGCCA 2 cut(s) 527, 1833
MluCI AATT 7 cut(s) 559, 748, 977, 1079, 1171, 1192, 1434
MluNI TGGCCA 2 cut(s) 527, 1833
MlyI GAGTC 2 cut(s) 297, 810
MmeI TCCRAC 1 cut(s) 1989
Mox20I TGGCCA 2 cut(s) 527, 1833
Mph1103I ATGCAT 1 cut(s) 265
MroNI GCCGGC 1 cut(s) 1490
MroXI GAANNNNTTC 3 cut(s) 999, 1171, 1788
MscI TGGCCA 2 cut(s) 527, 1833
MseI TTAA 4 cut(s) 558, 765, 1422, 1698
MslI CAYNNNNRTG 2 cut(s) 830, 1158
Msp20I TGGCCA 2 cut(s) 527, 1833
MspA1I CMGCKG 2 cut(s) 338, 1043
MspI CCGG 4 cut(s) 94, 1439, 1491, 1984
MspR9I CCNGG 4 cut(s) 95, 1440, 1878, 1984
Mva1269I GAATGC 2 cut(s) 847, 1617
MvaI CCWGG 1 cut(s) 1878
MwoI GCNNNNNNNGC 9 cut(s) 344, 473, 971, 980, 1049, 1595, 2031, 2099, 2289
NaeI GCCGGC 1 cut(s) 1492
NciI CCSGG 3 cut(s) 95, 1440, 1984
NdeI CATATG 1 cut(s) 1089
NdeII GATC 8 cut(s) 553, 1084, 1215, 1258, 1534, 1630, 1944, 2020
NgoMIV GCCGGC 1 cut(s) 1490
NlaIV GGNNCC 5 cut(s) 98, 1338, 1395, 2077, 2170
NmuCI GTSAC 3 cut(s) 1036, 1452, 1618
NsbI TGCGCA 1 cut(s) 614
NsiI ATGCAT 1 cut(s) 265
NspI RCATGY 8 cut(s) 263, 353, 642, 1774, 1925, 2017, 2054, 2267
NspV TTCGAA 2 cut(s) 418, 1003
PciI ACATGT 2 cut(s) 349, 1770
PctI GAATGC 2 cut(s) 847, 1617
PdiI GCCGGC 1 cut(s) 1492
PdmI GAANNNNTTC 3 cut(s) 999, 1171, 1788
PfeI GAWTC 3 cut(s) 1202, 1789, 1824
PkrI GCNGC 7 cut(s) 745, 1045, 1048, 1051, 1667, 2160, 2182
PleI GAGTC 2 cut(s) 296, 809
PpsI GAGTC 2 cut(s) 296, 809
Ppu21I YACGTR 2 cut(s) 457, 2187
PscI ACATGT 2 cut(s) 349, 1770
PsiI TTATAA 1 cut(s) 1676
Psp1406I AACGTT 1 cut(s) 2006
Psp6I CCWGG 1 cut(s) 1876
PspGI CCWGG 1 cut(s) 1876
PspN4I GGNNCC 5 cut(s) 98, 1338, 1395, 2077, 2170
PspOMI GGGCCC 1 cut(s) 96
PspPI GGNCC 7 cut(s) 96, 97, 433, 564, 1337, 1493, 1646
PstI CTGCAG 2 cut(s) 1667, 1942
PstNI CAGNNNCTG 1 cut(s) 804
PsuI RGATCY 3 cut(s) 553, 1534, 1944
RsaI GTAC 6 cut(s) 464, 600, 1516, 1694, 2170, 2189
RsaNI GTAC 6 cut(s) 463, 599, 1515, 1693, 2169, 2188
RseI CAYNNNNRTG 2 cut(s) 830, 1158
SalI GTCGAC 1 cut(s) 506
SaqAI TTAA 4 cut(s) 558, 765, 1422, 1698
SatI GCNGC 7 cut(s) 744, 1044, 1047, 1050, 1666, 2159, 2181
Sau3AI GATC 8 cut(s) 553, 1084, 1215, 1258, 1534, 1630, 1944, 2020
Sau96I GGNCC 7 cut(s) 96, 97, 433, 564, 1337, 1493, 1646
SchI GAGTC 2 cut(s) 297, 810
ScrFI CCNGG 4 cut(s) 95, 1440, 1878, 1984
SduI GDGCHC 8 cut(s) 64, 100, 488, 811, 945, 1328, 1417, 1960
SfaNI GCATC 9 cut(s) 53, 152, 272, 1477, 1885, 1984, 2245, 2270, 2301
SfcI CTRYAG 2 cut(s) 1663, 1938
SfuI TTCGAA 2 cut(s) 418, 1003
SinI GGWCC 3 cut(s) 433, 1337, 1646
SmiMI CAYNNNNRTG 2 cut(s) 830, 1158
SmlI CTYRAG 1 cut(s) 1779
SmoI CTYRAG 1 cut(s) 1779
SnaBI TACGTA 2 cut(s) 457, 2187
Sse9I AATT 7 cut(s) 559, 748, 977, 1079, 1171, 1192, 1434
SsiI CCGC 6 cut(s) 338, 633, 744, 1041, 1050, 2133
SspI AATATT 2 cut(s) 441, 934
SspMI CTAG 2 cut(s) 1023, 1398
StyD4I CCNGG 4 cut(s) 93, 1438, 1876, 1982
StyI CCWWGG 2 cut(s) 1397, 1649
TaaI ACNGT 7 cut(s) 91, 229, 871, 883, 1036, 1390, 1586
TaiI ACGT 5 cut(s) 459, 1620, 2009, 2189, 2209
TaqII GACCGA 1 cut(s) 1634
TasI AATT 7 cut(s) 559, 748, 977, 1079, 1171, 1192, 1434
TatI WGTACW 1 cut(s) 598
TauI GCSGC 2 cut(s) 746, 1052
TfiI GAWTC 3 cut(s) 1202, 1789, 1824
Tru1I TTAA 4 cut(s) 558, 765, 1422, 1698
Tru9I TTAA 4 cut(s) 558, 765, 1422, 1698
TscAI CASTG 3 cut(s) 234, 876, 1326
TseFI GTSAC 3 cut(s) 1036, 1452, 1618
TseI GCWGC 5 cut(s) 1043, 1046, 1665, 2158, 2180
Tsp45I GTSAC 3 cut(s) 1036, 1452, 1618
TspDTI ATGAA 6 cut(s) 70, 237, 848, 870, 965, 1816
TspGWI ACGGA 1 cut(s) 1490
TspRI CASTG 3 cut(s) 234, 876, 1326
VneI GTGCAC 2 cut(s) 941, 1413
VpaK11BI GGWCC 3 cut(s) 433, 1337, 1646
XapI RAATTY 2 cut(s) 748, 1171
XceI RCATGY 8 cut(s) 263, 353, 642, 1774, 1925, 2017, 2054, 2267
XcmI CCANNNNNNNNNTGG 2 cut(s) 499, 723
XmaJI CCTAGG 1 cut(s) 1397
XmiI GTMKAC 1 cut(s) 507
XmnI GAANNNNTTC 3 cut(s) 999, 1171, 1788
XspI CTAG 2 cut(s) 1023, 1398
Zsp2I ATGCAT 1 cut(s) 265
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.