Rh6DG199900

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0000030
Physical Location & Seq
Reverse (-)
35613992 .. 35616694
2703 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG199900.1

Sequence Viewer

Length: 1401 bp
ATGACTGCAAAAAAGGTGTACCAGAAAGAAGATAATACCAGGGATACTGCAAGGAAGTTGAAAACCGAACGAGTTGTGGGATATCGTAATTGTGTGAAAACCGTGGTCAAGGAGCATAGGGCAAAACGGAGAAGATTGAAGAAGACGGAGGCATTCAATCTGAAAAGCAGTTTGAAAGACAATGATGAAGGTCATTTGGGTGTTTGTAAGATGGAGGAGAAAGGATTAGAAGAGAATATGCATCCAATTCCCAAGTCAAATAGTTGGGACTGTGTAAGAGAAGATGTTGAAGAATTGAAGTCCCATATGGAAAGACTACAGTCGACCGTTTCATGTATTGTATCCAATATAGGAGCCATTGGAAGACAATTATTTGATGCGGAACGTTCAATGGTGGTTAGCAAAGGCGCTAGCATCGAAGCAATTGTAACAGAGGTATTGAGAGTGATTGGTTCAAATGGAACCAAAGGATGTAAGGGCTACAAAAAAGCTGAAGCACGCATACATTATTTTAGTAATGAAACGTTCCATAACGATGGGAAAACAAAGGTACATGAAAGAGAAGAAATTGGTATTTGCGGAAAGGAGAAGGCGGGACATGAACAGAAACTGGAAACTTTTTCATGGGTTGAAAAAGTTTCTAGAAAGGAATCTAATATGTTGGCTTACTTGATCAGAAATAGTGGAATTGGTGAAGAGGAATGGAGGGACGATGTTGCCAAGTTTGGTGATTTTATGCTGTCACTTGGGGAAATACAGTGTCTATCACCAAATGTCATTAATATATGGGCAGCATACCTGAATGAAAATCAGTTAGAGAACTGGTTTCTCCCCACATCATTTGCGCTGACAGCAAACCGTCTTAATGCAGGGCTTGATGCGAAGGCTTTGGTGGCTTTAACAATTCGAACATGTCGGCTGCGGCGGTTTTATAAGCGACTTAATAAATGCTCCAAGATATTCATACCTATGGAGGACCAACATGCTGGACACTGGTTTCTTTTGGTGATGAACCTTGTCCAGCGAAGAGGTACATTGTGGGATAGCTTGCCGGATGTTGGAGGTTTAGAAAGGCGAATGAAGCTGGCAACAACAAGCATTAATTTGTTGCAGCGTGTTTTTGAGAACGACATGACAAGATCAAGTGATGTACAATACCATTTTCCCTCATTTGAGTTGAGGGTTGGCCCAAGCAACCCCACCCACGGGAATACTAATGAAAGTGGGATATACGTCATACGTCATATGCAGCACCCTATGACGAATTGGTTTGAAGAGTTTGTTGCTGAGGATCATAGGGAAAGTTTGTGCATTGAGACTGTGAAGCACCCCAGCAATGAAGTCCTTAAGAAAGTTAAAGCTGCAGTTGAATCGTTCTGCAGTCAAATGGAACCAAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

466

Amino Acids

53.47

Weight (kDa)

8.8

Isoelectric Point (pI)

38.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_C48 PF02902 312 - 427 5.3e-09 Ulp1 protease family, C-terminal catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 933
AccI GTMKAC 1 cut(s) 323
AciI CCGC 5 cut(s) 380, 579, 593, 922, 925
AclI AACGTT 2 cut(s) 385, 524
AclWI GGATC 1 cut(s) 1299
AcuI CTGAAG 1 cut(s) 513
AfaI GTAC 4 cut(s) 20, 552, 1033, 1152
AfiI CCNNNNNNNGG 3 cut(s) 1058, 1205, 1206
AflII CTTAAG 1 cut(s) 1346
AflIII ACRYGT 1 cut(s) 911
AjnI CCWGG 1 cut(s) 38
AluBI AGCT 4 cut(s) 491, 1047, 1084, 1361
AluI AGCT 4 cut(s) 491, 1047, 1084, 1361
Alw26I GTCTC 1 cut(s) 1310
AlwI GGATC 1 cut(s) 1299
AlwNI CAGNNNCTG 1 cut(s) 610
AoxI GGCC 1 cut(s) 1186
ApeKI GCWGC 5 cut(s) 791, 919, 1111, 1249, 1361
AseI ATTAAT 2 cut(s) 780, 1101
AspLEI GCGC 2 cut(s) 410, 847
AspS9I GGNCC 2 cut(s) 976, 1187
AsuHPI GGTGA 4 cut(s) 704, 740, 759, 1018
AsuII TTCGAA 1 cut(s) 907
AsuNHI GCTAGC 1 cut(s) 410
AvaII GGWCC 1 cut(s) 976
BarI GAAGNNNNNNTAC 2 cut(s) 486, 518
BbsI GAAGAC 2 cut(s) 149, 370
BbvCI CCTCAGC 1 cut(s) 1287
BbvI GCAGC 5 cut(s) 803, 906, 1123, 1261, 1348
BccI CCATC 2 cut(s) 205, 530
BcgI CGANNNNNNTGC 2 cut(s) 1353, 1387
BciT130I CCWGG 1 cut(s) 40
BciVI GTATCC 2 cut(s) 37, 352
BclI TGATCA 1 cut(s) 672
BcoDI GTCTC 1 cut(s) 1310
BfaI CTAG 2 cut(s) 411, 642
BfmI CTRYAG 3 cut(s) 317, 1362, 1378
BfoI RGCGCY 1 cut(s) 411
BfrI CTTAAG 1 cut(s) 1346
BfuI GTATCC 2 cut(s) 37, 352
BisI GCNGC 6 cut(s) 792, 920, 923, 1112, 1250, 1362
BlsI GCNGC 6 cut(s) 793, 921, 924, 1113, 1251, 1363
Bme1390I CCNGG 1 cut(s) 40
Bme18I GGWCC 1 cut(s) 976
BmgT120I GGNCC 2 cut(s) 976, 1187
BmiI GGNNCC 3 cut(s) 355, 463, 1392
BmrFI CCNGG 1 cut(s) 40
BmsI GCATC 4 cut(s) 250, 367, 423, 868
BmtI GCTAGC 1 cut(s) 414
BoxI GACNNNNGTC 1 cut(s) 319
BpiI GAAGAC 2 cut(s) 149, 370
Bpu10I CCTNAGC 1 cut(s) 1287
Bpu14I TTCGAA 1 cut(s) 907
BsaJI CCNNGG 3 cut(s) 39, 102, 1204
Bsc4I CCNNNNNNNGG 3 cut(s) 1058, 1205, 1206
Bse1I ACTGG 3 cut(s) 615, 827, 998
Bse3DI GCAATG 1 cut(s) 1342
BseBI CCWGG 1 cut(s) 40
BseDI CCNNGG 3 cut(s) 39, 102, 1204
BseGI GGATG 3 cut(s) 241, 476, 1060
BseLI CCNNNNNNNGG 3 cut(s) 1058, 1205, 1206
BseMI GCAATG 1 cut(s) 1342
BseMII CTCAG 1 cut(s) 1278
BseNI ACTGG 3 cut(s) 615, 827, 998
BseRI GAGGAG 1 cut(s) 230
BseXI GCAGC 5 cut(s) 803, 906, 1123, 1261, 1348
BseYI CCCAGC 1 cut(s) 1331
Bsh1285I CGRYCG 1 cut(s) 327
BshFI GGCC 1 cut(s) 1188
BsiEI CGRYCG 1 cut(s) 327
BsiSI CCGG 1 cut(s) 1052
BslFI GGGAC 4 cut(s) 281, 286, 609, 722
BslI CCNNNNNNNGG 3 cut(s) 1058, 1205, 1206
BsmAI GTCTC 1 cut(s) 1310
BsmFI GGGAC 4 cut(s) 281, 286, 609, 722
BsmI GAATGC 1 cut(s) 152
BsnI GGCC 1 cut(s) 1188
Bsp119I TTCGAA 1 cut(s) 907
Bsp1407I TGTACA 1 cut(s) 1150
Bsp143I GATC 3 cut(s) 672, 1139, 1291
BspACI CCGC 5 cut(s) 380, 579, 593, 922, 925
BspANI GGCC 1 cut(s) 1188
BspCNI CTCAG 1 cut(s) 1279
BspLI GGNNCC 3 cut(s) 355, 463, 1392
BspMAI CTGCAG 2 cut(s) 1366, 1382
BspOI GCTAGC 1 cut(s) 414
BspPI GGATC 1 cut(s) 1299
BspT104I TTCGAA 1 cut(s) 907
BspTI CTTAAG 1 cut(s) 1346
BsrDI GCAATG 1 cut(s) 1342
BsrGI TGTACA 1 cut(s) 1150
BsrI ACTGG 3 cut(s) 615, 827, 998
BssECI CCNNGG 3 cut(s) 39, 102, 1204
BssMI GATC 3 cut(s) 672, 1139, 1291
Bst2UI CCWGG 1 cut(s) 40
Bst4CI ACNGT 7 cut(s) 103, 272, 321, 328, 759, 860, 1321
Bst6I CTCTTC 4 cut(s) 225, 690, 1021, 1269
BstAFI CTTAAG 1 cut(s) 1346
BstAUI TGTACA 1 cut(s) 1150
BstBI TTCGAA 1 cut(s) 907
BstC8I GCNNGC 4 cut(s) 412, 499, 1049, 1086
BstDEI CTNAG 1 cut(s) 1287
BstDSI CCRYGG 2 cut(s) 102, 1204
BstF5I GGATG 3 cut(s) 241, 476, 1060
BstH2I RGCGCY 1 cut(s) 411
BstHHI GCGC 2 cut(s) 410, 847
BstKTI GATC 3 cut(s) 675, 1142, 1294
BstMAI GTCTC 1 cut(s) 1310
BstMBI GATC 3 cut(s) 672, 1139, 1291
BstMCI CGRYCG 1 cut(s) 327
BstMWI GCNNNNNNNGC 3 cut(s) 851, 893, 1081
BstNI CCWGG 1 cut(s) 40
BstNSI RCATGY 2 cut(s) 915, 986
BstPAI GACNNNNGTC 1 cut(s) 319
BstSCI CCNGG 1 cut(s) 38
BstSFI CTRYAG 3 cut(s) 317, 1362, 1378
BstV1I GCAGC 5 cut(s) 803, 906, 1123, 1261, 1348
BstV2I GAAGAC 2 cut(s) 149, 370
BstXI CCANNNNNNTGG 2 cut(s) 536, 986
BsuI GTATCC 2 cut(s) 37, 352
BsuRI GGCC 1 cut(s) 1188
BtgI CCRYGG 2 cut(s) 102, 1204
BtsCI GGATG 3 cut(s) 241, 476, 1060
BtsIMutI CAGTG 2 cut(s) 764, 991
Cac8I GCNNGC 4 cut(s) 412, 499, 1049, 1086
CaiI CAGNNNCTG 1 cut(s) 610
CfoI GCGC 2 cut(s) 410, 847
Cfr13I GGNCC 2 cut(s) 976, 1187
Csp6I GTAC 4 cut(s) 19, 551, 1032, 1151
CspCI CAANNNNNGTGG 2 cut(s) 823, 858
CviAII CATG 7 cut(s) 333, 554, 599, 624, 912, 983, 1132
CviQI GTAC 4 cut(s) 19, 551, 1032, 1151
DdeI CTNAG 1 cut(s) 1287
DpnI GATC 3 cut(s) 674, 1141, 1293
DpnII GATC 3 cut(s) 672, 1139, 1291
Eam1104I CTCTTC 4 cut(s) 225, 690, 1021, 1269
EarI CTCTTC 4 cut(s) 225, 690, 1021, 1269
Eco32I GATATC 1 cut(s) 83
Eco47I GGWCC 1 cut(s) 976
Eco57I CTGAAG 1 cut(s) 513
EcoRII CCWGG 1 cut(s) 38
EcoRV GATATC 1 cut(s) 83
EcoT22I ATGCAT 1 cut(s) 243
FaeI CATG 7 cut(s) 336, 557, 602, 627, 915, 986, 1135
FaqI GGGAC 4 cut(s) 281, 286, 609, 722
FatI CATG 7 cut(s) 332, 553, 598, 623, 911, 982, 1131
FauI CCCGC 1 cut(s) 586
FauNDI CATATG 2 cut(s) 306, 1245
FbaI TGATCA 1 cut(s) 672
FblI GTMKAC 1 cut(s) 323
Fnu4HI GCNGC 6 cut(s) 792, 920, 923, 1112, 1250, 1362
FokI GGATG 3 cut(s) 228, 483, 1067
Fsp4HI GCNGC 6 cut(s) 792, 920, 923, 1112, 1250, 1362
FspBI CTAG 2 cut(s) 411, 642
GlaI GCGC 2 cut(s) 409, 846
GluI GCNGC 6 cut(s) 792, 920, 923, 1112, 1250, 1362
GsaI CCCAGC 1 cut(s) 1335
HaeII RGCGCY 1 cut(s) 411
HaeIII GGCC 1 cut(s) 1188
HapII CCGG 1 cut(s) 1052
HhaI GCGC 2 cut(s) 410, 847
Hin1II CATG 7 cut(s) 336, 557, 602, 627, 915, 986, 1135
Hin6I GCGC 2 cut(s) 408, 845
HinP1I GCGC 2 cut(s) 408, 845
HincII GTYRAC 1 cut(s) 324
HindII GTYRAC 1 cut(s) 324
HinfI GANTC 2 cut(s) 650, 1370
HpaII CCGG 1 cut(s) 1052
HphI GGTGA 4 cut(s) 704, 740, 759, 1018
Hpy166II GTNNAC 2 cut(s) 19, 324
Hpy188I TCNGA 2 cut(s) 162, 677
Hpy188III TCNNGA 1 cut(s) 642
Hpy8I GTNNAC 2 cut(s) 19, 324
HpyAV CCTTC 3 cut(s) 182, 583, 877
HpyCH4III ACNGT 7 cut(s) 103, 272, 321, 328, 759, 860, 1321
HpyCH4IV ACGT 4 cut(s) 385, 524, 1233, 1240
HpyCH4V TGCA 9 cut(s) 8, 50, 241, 869, 1111, 1249, 1311, 1364, 1380
HpyF10VI GCNNNNNNNGC 3 cut(s) 851, 893, 1081
HpyF3I CTNAG 1 cut(s) 1287
HpySE526I ACGT 4 cut(s) 385, 524, 1233, 1240
Hsp92II CATG 7 cut(s) 336, 557, 602, 627, 915, 986, 1135
HspAI GCGC 2 cut(s) 408, 845
Ksp22I TGATCA 1 cut(s) 672
Kzo9I GATC 3 cut(s) 672, 1139, 1291
LmnI GCTCC 3 cut(s) 112, 353, 956
Lsp1109I GCAGC 5 cut(s) 803, 906, 1123, 1261, 1348
LweI GCATC 4 cut(s) 250, 367, 423, 868
MaeI CTAG 2 cut(s) 411, 642
MaeII ACGT 4 cut(s) 385, 524, 1233, 1240
MaeIII GTNAC 2 cut(s) 427, 741
MalI GATC 3 cut(s) 674, 1141, 1293
MboI GATC 3 cut(s) 672, 1139, 1291
MfeI CAATTG 1 cut(s) 423
MmeI TCCRAC 1 cut(s) 1039
Mph1103I ATGCAT 1 cut(s) 243
MseI TTAA 7 cut(s) 780, 864, 899, 942, 1101, 1347, 1356
MslI CAYNNNNRTG 3 cut(s) 198, 534, 968
MspCI CTTAAG 1 cut(s) 1346
MspI CCGG 1 cut(s) 1052
MspR9I CCNGG 1 cut(s) 40
MunI CAATTG 1 cut(s) 423
Mva1269I GAATGC 1 cut(s) 152
MvaI CCWGG 1 cut(s) 40
MwoI GCNNNNNNNGC 3 cut(s) 851, 893, 1081
NdeI CATATG 2 cut(s) 306, 1245
NdeII GATC 3 cut(s) 672, 1139, 1291
NheI GCTAGC 1 cut(s) 410
NlaIII CATG 7 cut(s) 336, 557, 602, 627, 915, 986, 1135
NlaIV GGNNCC 3 cut(s) 355, 463, 1392
NmuCI GTSAC 1 cut(s) 741
NsiI ATGCAT 1 cut(s) 243
NspI RCATGY 2 cut(s) 915, 986
NspV TTCGAA 1 cut(s) 907
PciI ACATGT 1 cut(s) 911
PctI GAATGC 1 cut(s) 152
PfeI GAWTC 2 cut(s) 650, 1370
PkrI GCNGC 6 cut(s) 793, 921, 924, 1113, 1251, 1363
PscI ACATGT 1 cut(s) 911
PshAI GACNNNNGTC 1 cut(s) 319
PshBI ATTAAT 2 cut(s) 780, 1101
PsiI TTATAA 1 cut(s) 933
Psp1406I AACGTT 2 cut(s) 385, 524
Psp6I CCWGG 1 cut(s) 38
PspFI CCCAGC 1 cut(s) 1331
PspGI CCWGG 1 cut(s) 38
PspN4I GGNNCC 3 cut(s) 355, 463, 1392
PspPI GGNCC 2 cut(s) 976, 1187
PstI CTGCAG 2 cut(s) 1366, 1382
PstNI CAGNNNCTG 1 cut(s) 610
RsaI GTAC 4 cut(s) 20, 552, 1033, 1152
RsaNI GTAC 4 cut(s) 19, 551, 1032, 1151
RseI CAYNNNNRTG 3 cut(s) 198, 534, 968
SalI GTCGAC 1 cut(s) 322
SaqAI TTAA 7 cut(s) 780, 864, 899, 942, 1101, 1347, 1356
SatI GCNGC 6 cut(s) 792, 920, 923, 1112, 1250, 1362
Sau3AI GATC 3 cut(s) 672, 1139, 1291
Sau96I GGNCC 2 cut(s) 976, 1187
ScrFI CCNGG 1 cut(s) 40
SfaNI GCATC 4 cut(s) 250, 367, 423, 868
SfcI CTRYAG 3 cut(s) 317, 1362, 1378
SfuI TTCGAA 1 cut(s) 907
SinI GGWCC 1 cut(s) 976
SmiMI CAYNNNNRTG 3 cut(s) 198, 534, 968
SmlI CTYRAG 1 cut(s) 1346
SmoI CTYRAG 1 cut(s) 1346
SsiI CCGC 5 cut(s) 380, 579, 593, 922, 925
SspMI CTAG 2 cut(s) 411, 642
StyD4I CCNGG 1 cut(s) 38
TaaI ACNGT 7 cut(s) 103, 272, 321, 328, 759, 860, 1321
TaiI ACGT 4 cut(s) 388, 527, 1236, 1243
TaqI TCGA 3 cut(s) 323, 417, 907
TatI WGTACW 1 cut(s) 1150
TauI GCSGC 1 cut(s) 925
TfiI GAWTC 2 cut(s) 650, 1370
Tru1I TTAA 7 cut(s) 780, 864, 899, 942, 1101, 1347, 1356
Tru9I TTAA 7 cut(s) 780, 864, 899, 942, 1101, 1347, 1356
TscAI CASTG 2 cut(s) 764, 998
TseFI GTSAC 1 cut(s) 741
TseI GCWGC 5 cut(s) 791, 919, 1111, 1249, 1361
Tsp45I GTSAC 1 cut(s) 741
TspGWI ACGGA 2 cut(s) 142, 161
TspRI CASTG 2 cut(s) 764, 998
Vha464I CTTAAG 1 cut(s) 1346
VpaK11BI GGWCC 1 cut(s) 976
VspI ATTAAT 2 cut(s) 780, 1101
XbaI TCTAGA 1 cut(s) 641
XceI RCATGY 2 cut(s) 915, 986
XmiI GTMKAC 1 cut(s) 323
XspI CTAG 2 cut(s) 411, 642
Zsp2I ATGCAT 1 cut(s) 243
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.