Rh6BG067300

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0000030
Physical Location & Seq
Reverse (-)
10415567 .. 10416928
1362 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG067300.1

Sequence Viewer

Length: 1362 bp
ATGGAATGCAGAAGAAAAGGACACCCAATATCTGTGCATAAGAAGTGGTGGCATCTAGGTGTACGGGAAATTATGAAGGGTCATCTATCTAATGATAGGGGGATATGGTTTGATGCACCTGCTGACTTCTCCAAAACTATTGTGAGTCTGCCATTGGAAAAAATTTCTGCTATAAGGGATATGGGCTTCGGTCCACTTCATATAATAGGCTGCCCCAAGTTGTATGAAGACGTATGCGACATGATGCTAAACAACCTTGAACCCTTGAATCAAACAGTTGTTATACATGGCAGGACTTTCTCTATTACGGCATCGGATTTTGAGCGCATCATGGGAGTTAAAGATGGTGGAGTCGATGTAGATTTTAGTGGAGGAGTTAACGAATCAATGATTGCTGTGTTGAAGAAAGAGTTAGACGGAAATGATGGGAACATAACTGTCAACTCATTGAAGGACATTGTGTTGAATCGAAGGGAAGTAGATGGTATTTTCAAAGTCGCGTTTGTCATGTATGCAATGTCAGGACTGCTGTGTCCAACGGAGGGAAACATTGTTGACCACATGTTGCTAGTGCCGCTCATGAAGGCCGAGTCAATTGAGGGACTAAATTGGGCCACATATTGCTGCAGTAAACTACACGATGCCGTGCTCACCATGAAGCCAGGAGATAATAGGAGAATAAGTGTATGTTTTTTGTTTCTCCAACCATTCTACTTTGATGTTGTTGGTACAAGTTTGGGTTTGGTTGACAAGAGCATTACTCCGCTTATATGGTGGGAAGTTGATATGACTTCTGAGTTAGTTGAGTGGATTGGGCAGCAAGGAGGTGTTAGAACAGACAACAAGAGGGTTTGGGGGGCTAAACATAAGGAATCTTGGTGCAATTTTAAAGTGCCTCAAAGAGATCAAGAGTGGAAAACTACTATTGCAAGTGCTTATGATCAGATGAAAGCAGTTTGTTCAGACATGGATTGTGTGAAAGAAGATGTACATGTTTTGAAGGAGAACGTAAGTCAGATAAAACCACGTCTGGAAGGTATGTCAATGCAGATTGAGGGGATACAACAGTTCTTTGCAACCTTGAGGAAGGACATGGTGGAAATGACTGTAAAAGAGGTTCTTAAACAGTACAATCCTGAAACAGTTCATGAAAGGAGACCTATGCACACGACATGGACAGAGAGGGGAAACACTGAGTTGAAGAGTAATATTGCACAATACAATAGTGGGAAGAAATTGCAAGAAGTGTGTGTCATTTCAGATGACACTTCATCATTGAAGTTTCCTCACTCTAATAATGCTCACCCGGGTGTTGCAGCCTACCATCAGGTTTGTGCTAAACTAGCTTCCTTTACAAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMG_box

Protein Analysis

453

Amino Acids

51.19

Weight (kDa)

6.32

Isoelectric Point (pI)

31.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 127
AasI GACNNNNNNGTC 1 cut(s) 531
Acc36I ACCTGC 1 cut(s) 127
AccBSI CCGCTC 1 cut(s) 577
AccII CGCG 1 cut(s) 500
AciI CCGC 2 cut(s) 575, 764
AcsI RAATTY 1 cut(s) 162
AfaI GTAC 4 cut(s) 63, 730, 990, 1130
AfiI CCNNNNNNNGG 1 cut(s) 542
AflIII ACRYGT 2 cut(s) 561, 991
AgsI TTSAA 9 cut(s) 260, 268, 403, 451, 466, 493, 1000, 1201, 1279
AjiI CACGTC 1 cut(s) 1028
AjnI CCWGG 1 cut(s) 661
AleI CACNNNNGTG 1 cut(s) 1308
AluBI AGCT 1 cut(s) 1346
AluI AGCT 1 cut(s) 1346
Alw21I GWGCWC 1 cut(s) 651
Alw26I GTCTC 1 cut(s) 1150
Ama87I CYCGRG 1 cut(s) 1306
AoxI GGCC 2 cut(s) 585, 612
ApeKI GCWGC 4 cut(s) 210, 624, 817, 1316
ApoI RAATTY 1 cut(s) 162
Asp700I GAANNNNTTC 1 cut(s) 1143
AspLEI GCGC 1 cut(s) 327
AspS9I GGNCC 2 cut(s) 191, 612
AsuC2I CCSGG 2 cut(s) 1307, 1308
AsuHPI GGTGA 2 cut(s) 643, 1295
AvaI CYCGRG 1 cut(s) 1306
AvaII GGWCC 1 cut(s) 191
BaeI ACNNNNGTAYC 2 cut(s) 1052, 1085
BbsI GAAGAC 1 cut(s) 234
Bbv12I GWGCWC 1 cut(s) 651
BbvI GCAGC 4 cut(s) 197, 611, 829, 1328
BccI CCATC 4 cut(s) 338, 419, 476, 1332
BceAI ACGGC 2 cut(s) 324, 629
BciT130I CCWGG 1 cut(s) 663
BciVI GTATCC 1 cut(s) 1053
BclI TGATCA 1 cut(s) 940
BcnI CCSGG 2 cut(s) 1307, 1308
BcoDI GTCTC 1 cut(s) 1150
BfaI CTAG 3 cut(s) 56, 569, 1343
BfmI CTRYAG 1 cut(s) 625
BfuAI ACCTGC 1 cut(s) 127
BfuI GTATCC 1 cut(s) 1053
BisI GCNGC 5 cut(s) 211, 575, 625, 818, 1317
BlsI GCNGC 5 cut(s) 212, 576, 626, 819, 1318
Bme1390I CCNGG 3 cut(s) 663, 1307, 1308
Bme18I GGWCC 1 cut(s) 191
BmeT110I CYCGRG 1 cut(s) 1306
BmgBI CACGTC 1 cut(s) 1028
BmgT120I GGNCC 2 cut(s) 191, 612
BmrFI CCNGG 3 cut(s) 663, 1307, 1308
BmsI GCATC 6 cut(s) 61, 103, 234, 320, 336, 631
BpiI GAAGAC 1 cut(s) 234
BplI GAGNNNNNCTC 2 cut(s) 745, 777
BpuEI CTTGAG 1 cut(s) 1102
BpuMI CCSGG 2 cut(s) 1307, 1308
BsaI GGTCTC 1 cut(s) 1150
BsaJI CCNNGG 1 cut(s) 1306
BsaXI ACNNNNNCTCC 4 cut(s) 342, 372, 667, 697
Bsc4I CCNNNNNNNGG 1 cut(s) 542
Bse3DI GCAATG 1 cut(s) 522
BseBI CCWGG 1 cut(s) 663
BseDI CCNNGG 1 cut(s) 1306
BseLI CCNNNNNNNGG 1 cut(s) 542
BseMI GCAATG 1 cut(s) 522
BseMII CTCAG 2 cut(s) 786, 1185
BseRI GAGGAG 1 cut(s) 387
BseXI GCAGC 4 cut(s) 197, 611, 829, 1328
Bsh1236I CGCG 1 cut(s) 500
BshFI GGCC 2 cut(s) 587, 614
BsiHKAI GWGCWC 1 cut(s) 651
BsiHKCI CYCGRG 1 cut(s) 1306
BsiSI CCGG 1 cut(s) 1307
BslFI GGGAC 1 cut(s) 615
BslI CCNNNNNNNGG 1 cut(s) 542
BsmAI GTCTC 1 cut(s) 1150
BsmFI GGGAC 1 cut(s) 615
BsmI GAATGC 1 cut(s) 11
BsnI GGCC 2 cut(s) 587, 614
Bso31I GGTCTC 1 cut(s) 1150
BsoBI CYCGRG 1 cut(s) 1306
Bsp1286I GDGCHC 1 cut(s) 651
Bsp1407I TGTACA 1 cut(s) 988
Bsp143I GATC 2 cut(s) 904, 940
BspACI CCGC 2 cut(s) 575, 764
BspANI GGCC 2 cut(s) 587, 614
BspCNI CTCAG 2 cut(s) 787, 1186
BspFNI CGCG 1 cut(s) 500
BspHI TCATGA 2 cut(s) 579, 1147
BspMAI CTGCAG 1 cut(s) 629
BspMI ACCTGC 1 cut(s) 127
BspTNI GGTCTC 1 cut(s) 1150
BsrBI CCGCTC 1 cut(s) 577
BsrDI GCAATG 1 cut(s) 522
BsrGI TGTACA 1 cut(s) 988
BssECI CCNNGG 1 cut(s) 1306
BssMI GATC 2 cut(s) 904, 940
Bst2UI CCWGG 1 cut(s) 663
Bst4CI ACNGT 6 cut(s) 277, 439, 1068, 1108, 1128, 1144
Bst6I CTCTTC 1 cut(s) 1196
BstAUI TGTACA 1 cut(s) 988
BstDEI CTNAG 2 cut(s) 795, 1194
BstFNI CGCG 1 cut(s) 500
BstHHI GCGC 1 cut(s) 327
BstKTI GATC 2 cut(s) 907, 943
BstMAI GTCTC 1 cut(s) 1150
BstMBI GATC 2 cut(s) 904, 940
BstMWI GCNNNNNNNGC 2 cut(s) 574, 1343
BstNI CCWGG 1 cut(s) 663
BstNSI RCATGY 2 cut(s) 565, 995
BstSCI CCNGG 3 cut(s) 661, 1305, 1306
BstSFI CTRYAG 1 cut(s) 625
BstUI CGCG 1 cut(s) 500
BstV1I GCAGC 4 cut(s) 197, 611, 829, 1328
BstV2I GAAGAC 1 cut(s) 234
BsuI GTATCC 1 cut(s) 1053
BsuRI GGCC 2 cut(s) 587, 614
BtrI CACGTC 1 cut(s) 1028
BtsIMutI CAGTG 1 cut(s) 1191
BveI ACCTGC 1 cut(s) 127
CciI TCATGA 2 cut(s) 579, 1147
CfoI GCGC 1 cut(s) 327
Cfr13I GGNCC 2 cut(s) 191, 612
Cfr9I CCCGGG 1 cut(s) 1306
Csp6I GTAC 4 cut(s) 62, 729, 989, 1129
CviJI RGCY 8 cut(s) 186, 210, 587, 614, 661, 860, 1319, 1346
CviKI_1 RGCY 8 cut(s) 186, 210, 587, 614, 661, 860, 1319, 1346
CviQI GTAC 4 cut(s) 62, 729, 989, 1129
DdeI CTNAG 2 cut(s) 795, 1194
DpnI GATC 2 cut(s) 906, 942
DpnII GATC 2 cut(s) 904, 940
DraI TTTAAA 1 cut(s) 889
DrdI GACNNNNNNGTC 1 cut(s) 531
DseDI GACNNNNNNGTC 1 cut(s) 531
Eam1104I CTCTTC 1 cut(s) 1196
EarI CTCTTC 1 cut(s) 1196
Eco31I GGTCTC 1 cut(s) 1150
Eco47I GGWCC 1 cut(s) 191
Eco88I CYCGRG 1 cut(s) 1306
EcoRII CCWGG 1 cut(s) 661
FalI AAGNNNNNCTT 2 cut(s) 1104, 1136
FaqI GGGAC 1 cut(s) 615
FbaI TGATCA 1 cut(s) 940
Fnu4HI GCNGC 5 cut(s) 211, 575, 625, 818, 1317
Fsp4HI GCNGC 5 cut(s) 211, 575, 625, 818, 1317
FspBI CTAG 3 cut(s) 56, 569, 1343
GlaI GCGC 1 cut(s) 326
GluI GCNGC 5 cut(s) 211, 575, 625, 818, 1317
HaeIII GGCC 2 cut(s) 587, 614
HapII CCGG 1 cut(s) 1307
HhaI GCGC 1 cut(s) 327
Hin6I GCGC 1 cut(s) 325
HinP1I GCGC 1 cut(s) 325
HincII GTYRAC 4 cut(s) 379, 442, 556, 748
HindII GTYRAC 4 cut(s) 379, 442, 556, 748
HinfI GANTC 7 cut(s) 145, 268, 351, 383, 466, 590, 872
HpaI GTTAAC 1 cut(s) 379
HpaII CCGG 1 cut(s) 1307
HphI GGTGA 2 cut(s) 643, 1295
Hpy166II GTNNAC 7 cut(s) 62, 194, 379, 442, 556, 632, 748
Hpy188I TCNGA 6 cut(s) 316, 796, 945, 964, 1017, 1261
Hpy188III TCNNGA 6 cut(s) 522, 580, 908, 1031, 1136, 1148
Hpy8I GTNNAC 7 cut(s) 62, 194, 379, 442, 556, 632, 748
HpyAV CCTTC 7 cut(s) 70, 445, 465, 577, 994, 1028, 1081
HpyCH4III ACNGT 6 cut(s) 277, 439, 1068, 1108, 1128, 1144
HpyCH4IV ACGT 3 cut(s) 231, 1008, 1027
HpyF10VI GCNNNNNNNGC 2 cut(s) 574, 1343
HpyF3I CTNAG 2 cut(s) 795, 1194
HpySE526I ACGT 3 cut(s) 231, 1008, 1027
HspAI GCGC 1 cut(s) 325
Ksp22I TGATCA 1 cut(s) 940
KspAI GTTAAC 1 cut(s) 379
Kzo9I GATC 2 cut(s) 904, 940
LpnPI CCDG 9 cut(s) 132, 277, 507, 648, 675, 1016, 1149, 1313, 1320
Lsp1109I GCAGC 4 cut(s) 197, 611, 829, 1328
LweI GCATC 6 cut(s) 61, 103, 234, 320, 336, 631
MaeI CTAG 3 cut(s) 56, 569, 1343
MaeII ACGT 3 cut(s) 231, 1008, 1027
MalI GATC 2 cut(s) 906, 942
MbiI CCGCTC 1 cut(s) 577
MboI GATC 2 cut(s) 904, 940
MboII GAAGA 6 cut(s) 24, 239, 415, 995, 1213, 1243
MfeI CAATTG 1 cut(s) 594
MhlI GDGCHC 1 cut(s) 651
MluCI AATT 6 cut(s) 69, 162, 594, 607, 883, 1235
MlyI GAGTC 3 cut(s) 154, 360, 599
MmeI TCCRAC 2 cut(s) 560, 727
MroXI GAANNNNTTC 1 cut(s) 1143
MseI TTAA 5 cut(s) 339, 378, 888, 1122, 1360
MslI CAYNNNNRTG 2 cut(s) 57, 1308
MspI CCGG 1 cut(s) 1307
MspR9I CCNGG 3 cut(s) 663, 1307, 1308
MunI CAATTG 1 cut(s) 594
Mva1269I GAATGC 1 cut(s) 11
MvaI CCWGG 1 cut(s) 663
MvnI CGCG 1 cut(s) 500
MwoI GCNNNNNNNGC 2 cut(s) 574, 1343
NciI CCSGG 2 cut(s) 1307, 1308
NdeII GATC 2 cut(s) 904, 940
NmeAIII GCCGAG 1 cut(s) 613
NspI RCATGY 2 cut(s) 565, 995
OliI CACNNNNGTG 1 cut(s) 1308
PagI TCATGA 2 cut(s) 579, 1147
PaqCI CACCTGC 1 cut(s) 127
PciI ACATGT 2 cut(s) 561, 991
PctI GAATGC 1 cut(s) 11
PdmI GAANNNNTTC 1 cut(s) 1143
PfeI GAWTC 4 cut(s) 268, 383, 466, 872
PkrI GCNGC 5 cut(s) 212, 576, 626, 819, 1318
PleI GAGTC 3 cut(s) 153, 359, 598
PpsI GAGTC 3 cut(s) 153, 359, 598
PscI ACATGT 2 cut(s) 561, 991
Psp6I CCWGG 1 cut(s) 661
PspGI CCWGG 1 cut(s) 661
PspPI GGNCC 2 cut(s) 191, 612
PsrI GAACNNNNNNTAC 2 cut(s) 1101, 1133
PstI CTGCAG 1 cut(s) 629
RsaI GTAC 4 cut(s) 63, 730, 990, 1130
RsaNI GTAC 4 cut(s) 62, 729, 989, 1129
RseI CAYNNNNRTG 2 cut(s) 57, 1308
SaqAI TTAA 5 cut(s) 339, 378, 888, 1122, 1360
SatI GCNGC 5 cut(s) 211, 575, 625, 818, 1317
Sau3AI GATC 2 cut(s) 904, 940
Sau96I GGNCC 2 cut(s) 191, 612
SchI GAGTC 3 cut(s) 154, 360, 599
ScrFI CCNGG 3 cut(s) 663, 1307, 1308
SduI GDGCHC 1 cut(s) 651
SfaNI GCATC 6 cut(s) 61, 103, 234, 320, 336, 631
SfcI CTRYAG 1 cut(s) 625
SinI GGWCC 1 cut(s) 191
SmaI CCCGGG 1 cut(s) 1308
SmiMI CAYNNNNRTG 2 cut(s) 57, 1308
SmlI CTYRAG 1 cut(s) 1081
SmoI CTYRAG 1 cut(s) 1081
Sse9I AATT 6 cut(s) 69, 162, 594, 607, 883, 1235
SsiI CCGC 2 cut(s) 575, 764
SspI AATATT 1 cut(s) 1210
SspMI CTAG 3 cut(s) 56, 569, 1343
StyD4I CCNGG 3 cut(s) 661, 1305, 1306
TaaI ACNGT 6 cut(s) 277, 439, 1068, 1108, 1128, 1144
TaiI ACGT 3 cut(s) 234, 1011, 1030
TaqI TCGA 2 cut(s) 354, 469
TaqII GACCGA 1 cut(s) 179
TasI AATT 6 cut(s) 69, 162, 594, 607, 883, 1235
TatI WGTACW 2 cut(s) 988, 1128
TauI GCSGC 1 cut(s) 577
TfiI GAWTC 4 cut(s) 268, 383, 466, 872
Tru1I TTAA 5 cut(s) 339, 378, 888, 1122, 1360
Tru9I TTAA 5 cut(s) 339, 378, 888, 1122, 1360
TscAI CASTG 1 cut(s) 1198
TseI GCWGC 4 cut(s) 210, 624, 817, 1316
TspDTI ATGAA 9 cut(s) 89, 188, 240, 596, 671, 962, 1136, 1164, 1260
TspGWI ACGGA 2 cut(s) 432, 554
TspMI CCCGGG 1 cut(s) 1306
TspRI CASTG 1 cut(s) 1198
VpaK11BI GGWCC 1 cut(s) 191
XapI RAATTY 1 cut(s) 162
XceI RCATGY 2 cut(s) 565, 995
XmaI CCCGGG 1 cut(s) 1306
XmnI GAANNNNTTC 1 cut(s) 1143
XspI CTAG 3 cut(s) 56, 569, 1343
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.