Rmu_sc0006872.1_g000002

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006872.1
OG0000030
Physical Location & Seq
Forward (+)
3683 .. 9098
5416 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006872.1_g000002.1.cds

Sequence Viewer

Length: 1875 bp
atgcaccgtcgggtcacttgcaccagcagtgtgcaagtcacgtgccttaacagacgttgccatccgttgctagtagagactgttctgttcactgatctttatgcagaacacaaaggaaagatcagcaagagcgagatttggagtgcgcatggagaagacagagcgttcccaattcaatacgaatccggagttgttcttagcattcaccccaaggagctcaaattcccctttgaacctccaaatccaaaggaagctgtaaagtggttatatcttgcttcttttcagggccatgtccgagctcaataccaacttgcaatttgtctgtatcagggacgtggggcagatcgtaacatgaaagaagcggtgatggcgtcaaataaggcctcaagtgacgacaatagcggaagaatgaagagaagaaaactcagagaaatgtttcctgccaacaaaggcgcgaccaatgaatcaattcatgttagtaccggatttcacattagtgtgtttgaaggtatgtctttgttgaagtctgaagtagctgcgataaagtctgatgaggggaggcttagatcaactctgggatgtttggaatccaatattgagacattgagacaaaaattaattgaagtacaagacttagtctgtgaactgaaagttggtgggattgaaggtattgttggtgaggtaatacatgttgtgacaacaatgtggccaaacaccatgcataaggttgctgaaaatgttatacaaaccatggaggagaatggtgagcacaatttggtggctgacattcgcaaggagtcacgaaagcggaaattttgtctcagctatccaatttggaattttagtctcagccctccattatcattggacagccgtgcgaagcaccgaatatgtgaggaaatccctgcaaatgaggttgaccgtatggaagataagagggtgacaggaaaaggaaaggaaaaaaatggtacggattctaaggtcttaaagttcttgtttaggaagccaagaagaggacataagtccagggatgaagttgcccgcagtggacagttcggggtttcccatgaggatatccaatgtctttggccaacagtcccaatttcttccaaggtcataaacatttggactgcgtacatgtctcagaccaagtccaactcatggttcttacctactttctttgcggaacaagccgggtcaaatgaggatccatccaatgtacctgtttcaattgcattaacaatagttgcttgtgggctgcagaggttccataggcggttgaagcattgtgttgagataataaagggtgaattcgttattttcatcccattgtatgatgaaatcgccgaccattggtttttgttggttatgaaactaaaggagaaaattgctgagttgtgggatagtgtgccagaattcacatcattgaatagacgacttgagatagcaagagccactatgcttctactgcagacggtgtttggaagtgcaatgacgaagtcctcagatgtttattacaattttccctcatttcgcctctcatttgcagagggtaaccaaaccatagacaacaaatatgacagcgggatctacatcatgatgcagatgaagtgttattcggataagtggtttgaaggcgtattcaataattcaagcaatgaactattgaaatcggtgatgagagttgccatgaaaggtgaaggttgcggagaatgtatttctaatgcagccgaggccacaaaatccaatgccgaggccacacagtccaatgctgtcgttgcaactaactgtgacacaacaatggacattatccacgagaaggttcctaacggtcggaaatgtcgcagccatcgcaggagaaaatcccgagtctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

624

Amino Acids

70.81

Weight (kDa)

8.98

Isoelectric Point (pI)

47.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 147
AccB7I CCANNNNNTGG 1 cut(s) 1161
AccII CGCG 1 cut(s) 455
AccIII TCCGGA 1 cut(s) 185
AciI CCGC 8 cut(s) 362, 402, 808, 1042, 1184, 1276, 1584, 1707
AclWI GGATC 3 cut(s) 1202, 1215, 1595
AcoI YGGCCR 2 cut(s) 707, 1088
AcsI RAATTY 5 cut(s) 221, 812, 838, 1310, 1415
AcuI CTGAAG 1 cut(s) 549
AcvI CACGTG 1 cut(s) 42
AcyI GRCGYC 1 cut(s) 371
AfaI GTAC 5 cut(s) 481, 627, 970, 1136, 1221
AfiI CCNNNNNNNGG 4 cut(s) 1013, 1161, 1353, 1819
AflIII ACRYGT 2 cut(s) 688, 1137
AjiI CACGTC 1 cut(s) 335
AjnI CCWGG 1 cut(s) 1025
AjuI GAANNNNNNNTTGG 6 cut(s) 636, 657, 668, 689, 1148, 1180
AleI CACNNNNGTG 1 cut(s) 495
AluBI AGCT 5 cut(s) 217, 254, 299, 536, 825
AluI AGCT 5 cut(s) 217, 254, 299, 536, 825
Alw21I GWGCWC 3 cut(s) 219, 301, 771
Alw26I GTCTC 6 cut(s) 71, 593, 601, 824, 851, 1146
AlwI GGATC 3 cut(s) 1202, 1215, 1595
Ama87I CYCGRG 1 cut(s) 1866
Aor13HI TCCGGA 1 cut(s) 185
AoxI GGCC 6 cut(s) 286, 381, 707, 1088, 1734, 1755
ApeKI GCWGC 4 cut(s) 536, 1258, 1727, 1845
ApoI RAATTY 5 cut(s) 221, 812, 838, 1310, 1415
AseI ATTAAT 1 cut(s) 617
Asp700I GAANNNNTTC 2 cut(s) 435, 468
AspLEI GCGC 2 cut(s) 148, 455
AspS9I GGNCC 1 cut(s) 286
AsuC2I CCSGG 1 cut(s) 1195
AsuHPI GGTGA 8 cut(s) 197, 376, 689, 776, 952, 1319, 1687, 1709
AvaI CYCGRG 1 cut(s) 1866
BalI TGGCCA 2 cut(s) 709, 1090
BamHI GGATCC 1 cut(s) 1207
BanII GRGCYC 2 cut(s) 219, 301
BauI CACGAG 1 cut(s) 1814
BbrPI CACGTG 1 cut(s) 42
BbsI GAAGAC 1 cut(s) 162
Bbv12I GWGCWC 3 cut(s) 219, 301, 771
BbvI GCAGC 4 cut(s) 523, 1245, 1739, 1857
BccI CCATC 4 cut(s) 69, 361, 1219, 1857
BceAI ACGGC 1 cut(s) 858
BciT130I CCWGG 1 cut(s) 1027
BcnI CCSGG 1 cut(s) 1195
BcoDI GTCTC 6 cut(s) 71, 593, 601, 824, 851, 1146
BfaI CTAG 1 cut(s) 71
BfmI CTRYAG 2 cut(s) 1259, 1469
BisI GCNGC 4 cut(s) 537, 1259, 1728, 1846
BlsI GCNGC 4 cut(s) 538, 1260, 1729, 1847
Bme1390I CCNGG 2 cut(s) 1027, 1195
BmeT110I CYCGRG 1 cut(s) 1866
BmgBI CACGTC 1 cut(s) 335
BmgT120I GGNCC 1 cut(s) 286
BmiI GGNNCC 3 cut(s) 1209, 1268, 1824
BmrFI CCNGG 2 cut(s) 1027, 1195
BmsI GCATC 1 cut(s) 1590
BoxI GACNNNNGTC 1 cut(s) 1021
BpiI GAAGAC 1 cut(s) 162
BpuEI CTTGAG 2 cut(s) 370, 1460
BpuMI CCSGG 1 cut(s) 1195
BsaAI YACGTR 1 cut(s) 42
BsaBI GATNNNNATC 1 cut(s) 1592
BsaHI GRCGYC 1 cut(s) 371
BsaJI CCNNGG 6 cut(s) 210, 750, 1026, 1110, 1731, 1752
BsaWI WCCGGW 2 cut(s) 185, 482
Bsc4I CCNNNNNNNGG 4 cut(s) 1013, 1161, 1353, 1819
Bse3DI GCAATG 2 cut(s) 1497, 1663
Bse8I GATNNNNATC 1 cut(s) 1592
BseAI TCCGGA 1 cut(s) 185
BseBI CCWGG 1 cut(s) 1027
BseDI CCNNGG 6 cut(s) 210, 750, 1026, 1110, 1731, 1752
BseGI GGATG 5 cut(s) 61, 584, 1036, 1211, 1323
BseJI GATNNNNATC 1 cut(s) 1592
BseLI CCNNNNNNNGG 4 cut(s) 1013, 1161, 1353, 1819
BseMI GCAATG 2 cut(s) 1497, 1663
BseMII CTCAG 6 cut(s) 439, 835, 862, 1157, 1383, 1518
BseRI GAGGAG 1 cut(s) 770
BseXI GCAGC 4 cut(s) 523, 1245, 1739, 1857
Bsh1236I CGCG 1 cut(s) 455
Bsh1285I CGRYCG 1 cut(s) 1834
BshFI GGCC 6 cut(s) 288, 383, 709, 1090, 1736, 1757
BsiEI CGRYCG 1 cut(s) 1834
BsiHKAI GWGCWC 3 cut(s) 219, 301, 771
BsiHKCI CYCGRG 1 cut(s) 1866
BsiSI CCGG 3 cut(s) 186, 483, 1194
BslFI GGGAC 2 cut(s) 345, 1082
BslI CCNNNNNNNGG 4 cut(s) 1013, 1161, 1353, 1819
BsmAI GTCTC 6 cut(s) 71, 593, 601, 824, 851, 1146
BsmFI GGGAC 2 cut(s) 345, 1082
BsmI GAATGC 1 cut(s) 201
BsnI GGCC 6 cut(s) 288, 383, 709, 1090, 1736, 1757
BsoBI CYCGRG 1 cut(s) 1866
Bsp1286I GDGCHC 3 cut(s) 219, 301, 771
Bsp13I TCCGGA 1 cut(s) 185
Bsp143I GATC 6 cut(s) 94, 120, 343, 566, 1207, 1587
Bsp19I CCATGG 1 cut(s) 750
BspACI CCGC 8 cut(s) 362, 402, 808, 1042, 1184, 1276, 1584, 1707
BspANI GGCC 6 cut(s) 288, 383, 709, 1090, 1736, 1757
BspCNI CTCAG 6 cut(s) 438, 834, 861, 1156, 1384, 1517
BspEI TCCGGA 1 cut(s) 185
BspFNI CGCG 1 cut(s) 455
BspHI TCATGA 1 cut(s) 1596
BspLI GGNNCC 3 cut(s) 1209, 1268, 1824
BspMAI CTGCAG 2 cut(s) 1263, 1473
BspPI GGATC 3 cut(s) 1202, 1215, 1595
BsrDI GCAATG 2 cut(s) 1497, 1663
BssECI CCNNGG 6 cut(s) 210, 750, 1026, 1110, 1731, 1752
BssMI GATC 6 cut(s) 94, 120, 343, 566, 1207, 1587
BssNI GRCGYC 1 cut(s) 371
BssSI CACGAG 1 cut(s) 1814
BssT1I CCWWGG 3 cut(s) 210, 750, 1110
Bst2BI CACGAG 1 cut(s) 1814
Bst2UI CCWGG 1 cut(s) 1027
Bst4CI ACNGT 9 cut(s) 8, 82, 923, 1053, 1096, 1477, 1764, 1790, 1832
Bst6I CTCTTC 2 cut(s) 407, 1006
BstACI GRCGYC 1 cut(s) 371
BstBAI YACGTR 1 cut(s) 42
BstC8I GCNNGC 1 cut(s) 1042
BstDSI CCRYGG 1 cut(s) 750
BstEII GGTNACC 1 cut(s) 1553
BstF5I GGATG 5 cut(s) 61, 584, 1036, 1211, 1323
BstFNI CGCG 1 cut(s) 455
BstHHI GCGC 2 cut(s) 148, 455
BstKTI GATC 6 cut(s) 97, 123, 346, 569, 1210, 1590
BstMAI GTCTC 6 cut(s) 71, 593, 601, 824, 851, 1146
BstMBI GATC 6 cut(s) 94, 120, 343, 566, 1207, 1587
BstMCI CGRYCG 1 cut(s) 1834
BstMWI GCNNNNNNNGC 7 cut(s) 368, 1190, 1282, 1468, 1733, 1778, 1851
BstNI CCWGG 1 cut(s) 1027
BstNSI RCATGY 2 cut(s) 692, 1141
BstPAI GACNNNNGTC 1 cut(s) 1021
BstPI GGTNACC 1 cut(s) 1553
BstSCI CCNGG 2 cut(s) 1025, 1193
BstSFI CTRYAG 2 cut(s) 1259, 1469
BstUI CGCG 1 cut(s) 455
BstV1I GCAGC 4 cut(s) 523, 1245, 1739, 1857
BstV2I GAAGAC 1 cut(s) 162
BstX2I RGATCY 2 cut(s) 1207, 1587
BstYI RGATCY 2 cut(s) 1207, 1587
BsuRI GGCC 6 cut(s) 288, 383, 709, 1090, 1736, 1757
BtgI CCRYGG 1 cut(s) 750
BtgZI GCGATG 1 cut(s) 1835
BtrI CACGTC 1 cut(s) 335
BtsCI GGATG 5 cut(s) 61, 584, 1036, 1211, 1323
BtsI GCAGTG 2 cut(s) 34, 1051
BtsIMutI CAGTG 3 cut(s) 34, 90, 1051
Cac8I GCNNGC 1 cut(s) 1042
CciI TCATGA 1 cut(s) 1596
CfoI GCGC 2 cut(s) 148, 455
Cfr13I GGNCC 1 cut(s) 286
CseI GACGC 1 cut(s) 360
Csp6I GTAC 5 cut(s) 480, 626, 969, 1135, 1220
CviQI GTAC 5 cut(s) 480, 626, 969, 1135, 1220
DpnI GATC 6 cut(s) 96, 122, 345, 568, 1209, 1589
DpnII GATC 6 cut(s) 94, 120, 343, 566, 1207, 1587
EaeI YGGCCR 2 cut(s) 707, 1088
Eam1104I CTCTTC 2 cut(s) 407, 1006
EarI CTCTTC 2 cut(s) 407, 1006
Ecl136II GAGCTC 2 cut(s) 217, 299
Eco130I CCWWGG 3 cut(s) 210, 750, 1110
Eco147I AGGCCT 1 cut(s) 383
Eco24I GRGCYC 2 cut(s) 219, 301
Eco32I GATATC 1 cut(s) 1075
Eco53kI GAGCTC 2 cut(s) 217, 299
Eco57I CTGAAG 1 cut(s) 549
Eco72I CACGTG 1 cut(s) 42
Eco88I CYCGRG 1 cut(s) 1866
Eco91I GGTNACC 1 cut(s) 1553
EcoICRI GAGCTC 2 cut(s) 217, 299
EcoO65I GGTNACC 1 cut(s) 1553
EcoRI GAATTC 2 cut(s) 1310, 1415
EcoRII CCWGG 1 cut(s) 1025
EcoRV GATATC 1 cut(s) 1075
EcoT14I CCWWGG 3 cut(s) 210, 750, 1110
EcoT22I ATGCAT 1 cut(s) 723
EcoT38I GRGCYC 2 cut(s) 219, 301
ErhI CCWWGG 3 cut(s) 210, 750, 1110
FaqI GGGAC 2 cut(s) 345, 1082
FauI CCCGC 2 cut(s) 1049, 1577
Fnu4HI GCNGC 4 cut(s) 537, 1259, 1728, 1846
FokI GGATG 5 cut(s) 48, 591, 1043, 1198, 1310
FriOI GRGCYC 2 cut(s) 219, 301
Fsp4HI GCNGC 4 cut(s) 537, 1259, 1728, 1846
FspAI RTGCGCAY 1 cut(s) 147
FspBI CTAG 1 cut(s) 71
FspI TGCGCA 1 cut(s) 147
GlaI GCGC 2 cut(s) 147, 454
GluI GCNGC 4 cut(s) 537, 1259, 1728, 1846
HaeIII GGCC 6 cut(s) 288, 383, 709, 1090, 1736, 1757
HapII CCGG 3 cut(s) 186, 483, 1194
HgaI GACGC 1 cut(s) 360
HhaI GCGC 2 cut(s) 148, 455
Hin1I GRCGYC 1 cut(s) 371
Hin6I GCGC 2 cut(s) 146, 453
HinP1I GCGC 2 cut(s) 146, 453
HincII GTYRAC 1 cut(s) 919
HindII GTYRAC 1 cut(s) 919
HinfI GANTC 6 cut(s) 182, 464, 587, 797, 974, 1869
HpaII CCGG 3 cut(s) 186, 483, 1194
HphI GGTGA 8 cut(s) 197, 376, 689, 776, 952, 1319, 1687, 1709
Hpy166II GTNNAC 4 cut(s) 90, 644, 919, 1049
Hpy188I TCNGA 9 cut(s) 296, 428, 529, 550, 1146, 1507, 1621, 1836, 1874
Hpy188III TCNNGA 4 cut(s) 186, 801, 1597, 1866
Hpy8I GTNNAC 4 cut(s) 90, 644, 919, 1049
Hpy99I CGWCG 1 cut(s) 12
HpyAV CCTTC 5 cut(s) 500, 659, 1628, 1694, 1813
HpyCH4III ACNGT 9 cut(s) 8, 82, 923, 1053, 1096, 1477, 1764, 1790, 1832
HpyCH4IV ACGT 3 cut(s) 41, 55, 334
HpyF10VI GCNNNNNNNGC 7 cut(s) 368, 1190, 1282, 1468, 1733, 1778, 1851
HpySE526I ACGT 3 cut(s) 41, 55, 334
Hsp92I GRCGYC 1 cut(s) 371
HspAI GCGC 2 cut(s) 146, 453
Kpn2I TCCGGA 1 cut(s) 185
Kzo9I GATC 6 cut(s) 94, 120, 343, 566, 1207, 1587
LmnI GCTCC 1 cut(s) 214
Lsp1109I GCAGC 4 cut(s) 523, 1245, 1739, 1857
LweI GCATC 1 cut(s) 1590
MaeI CTAG 1 cut(s) 71
MaeII ACGT 3 cut(s) 41, 55, 334
MaeIII GTNAC 9 cut(s) 13, 37, 347, 389, 694, 798, 940, 1553, 1790
MalI GATC 6 cut(s) 96, 122, 345, 568, 1209, 1589
MboI GATC 6 cut(s) 94, 120, 343, 566, 1207, 1587
MboII GAAGA 7 cut(s) 167, 417, 424, 429, 941, 1023, 1098
MfeI CAATTG 1 cut(s) 1230
MflI RGATCY 2 cut(s) 1207, 1587
MhlI GDGCHC 3 cut(s) 219, 301, 771
MlsI TGGCCA 2 cut(s) 709, 1090
MluNI TGGCCA 2 cut(s) 709, 1090
MlyI GAGTC 1 cut(s) 806
MmeI TCCRAC 2 cut(s) 1179, 1814
Mox20I TGGCCA 2 cut(s) 709, 1090
Mph1103I ATGCAT 1 cut(s) 723
MroI TCCGGA 1 cut(s) 185
MroXI GAANNNNTTC 2 cut(s) 435, 468
MscI TGGCCA 2 cut(s) 709, 1090
MseI TTAA 4 cut(s) 48, 617, 986, 1238
MslI CAYNNNNRTG 4 cut(s) 495, 497, 1598, 1799
Msp20I TGGCCA 2 cut(s) 709, 1090
MspA1I CMGCKG 1 cut(s) 1584
MspI CCGG 3 cut(s) 186, 483, 1194
MspR9I CCNGG 2 cut(s) 1027, 1195
MunI CAATTG 1 cut(s) 1230
Mva1269I GAATGC 1 cut(s) 201
MvaI CCWGG 1 cut(s) 1027
MvnI CGCG 1 cut(s) 455
MwoI GCNNNNNNNGC 7 cut(s) 368, 1190, 1282, 1468, 1733, 1778, 1851
NciI CCSGG 1 cut(s) 1195
NcoI CCATGG 1 cut(s) 750
NdeII GATC 6 cut(s) 94, 120, 343, 566, 1207, 1587
NlaIV GGNNCC 3 cut(s) 1209, 1268, 1824
NmeAIII GCCGAG 2 cut(s) 1756, 1777
NmuCI GTSAC 7 cut(s) 13, 37, 389, 694, 798, 940, 1790
NsbI TGCGCA 1 cut(s) 147
NsiI ATGCAT 1 cut(s) 723
NspI RCATGY 2 cut(s) 692, 1141
OliI CACNNNNGTG 1 cut(s) 495
PagI TCATGA 1 cut(s) 1596
PceI AGGCCT 1 cut(s) 383
PciI ACATGT 2 cut(s) 688, 1137
PctI GAATGC 1 cut(s) 201
PdmI GAANNNNTTC 2 cut(s) 435, 468
PfeI GAWTC 4 cut(s) 182, 464, 587, 974
PflFI GACNNNGTC 3 cut(s) 635, 1150, 1498
PflMI CCANNNNNTGG 1 cut(s) 1161
PkrI GCNGC 4 cut(s) 538, 1260, 1729, 1847
PleI GAGTC 1 cut(s) 805
PmaCI CACGTG 1 cut(s) 42
PmlI CACGTG 1 cut(s) 42
PpsI GAGTC 1 cut(s) 805
Ppu21I YACGTR 1 cut(s) 42
PscI ACATGT 2 cut(s) 688, 1137
PshAI GACNNNNGTC 1 cut(s) 1021
PshBI ATTAAT 1 cut(s) 617
Psp124BI GAGCTC 2 cut(s) 219, 301
Psp6I CCWGG 1 cut(s) 1025
PspCI CACGTG 1 cut(s) 42
PspEI GGTNACC 1 cut(s) 1553
PspGI CCWGG 1 cut(s) 1025
PspN4I GGNNCC 3 cut(s) 1209, 1268, 1824
PspPI GGNCC 1 cut(s) 286
PsrI GAACNNNNNNTAC 2 cut(s) 66, 98
PstI CTGCAG 2 cut(s) 1263, 1473
PsuI RGATCY 2 cut(s) 1207, 1587
PsyI GACNNNGTC 3 cut(s) 635, 1150, 1498
RsaI GTAC 5 cut(s) 481, 627, 970, 1136, 1221
RsaNI GTAC 5 cut(s) 480, 626, 969, 1135, 1220
RseI CAYNNNNRTG 4 cut(s) 495, 497, 1598, 1799
SacI GAGCTC 2 cut(s) 219, 301
SaqAI TTAA 4 cut(s) 48, 617, 986, 1238
SatI GCNGC 4 cut(s) 537, 1259, 1728, 1846
Sau3AI GATC 6 cut(s) 94, 120, 343, 566, 1207, 1587
Sau96I GGNCC 1 cut(s) 286
SchI GAGTC 1 cut(s) 806
ScrFI CCNGG 2 cut(s) 1027, 1195
SduI GDGCHC 3 cut(s) 219, 301, 771
SfaNI GCATC 1 cut(s) 1590
SfcI CTRYAG 2 cut(s) 1259, 1469
SmiMI CAYNNNNRTG 4 cut(s) 495, 497, 1598, 1799
SmlI CTYRAG 2 cut(s) 385, 1439
SmoI CTYRAG 2 cut(s) 385, 1439
SseBI AGGCCT 1 cut(s) 383
SsiI CCGC 8 cut(s) 362, 402, 808, 1042, 1184, 1276, 1584, 1707
SspI AATATT 1 cut(s) 595
SspMI CTAG 1 cut(s) 71
SstI GAGCTC 2 cut(s) 219, 301
StuI AGGCCT 1 cut(s) 383
StyD4I CCNGG 2 cut(s) 1025, 1193
StyI CCWWGG 3 cut(s) 210, 750, 1110
TaaI ACNGT 9 cut(s) 8, 82, 923, 1053, 1096, 1477, 1764, 1790, 1832
TaiI ACGT 3 cut(s) 44, 58, 337
TatI WGTACW 1 cut(s) 625
TfiI GAWTC 4 cut(s) 182, 464, 587, 974
Tru1I TTAA 4 cut(s) 48, 617, 986, 1238
Tru9I TTAA 4 cut(s) 48, 617, 986, 1238
TscAI CASTG 3 cut(s) 34, 97, 1051
TseFI GTSAC 7 cut(s) 13, 37, 389, 694, 798, 940, 1790
TseI GCWGC 4 cut(s) 536, 1258, 1727, 1845
Tsp45I GTSAC 7 cut(s) 13, 37, 389, 694, 798, 940, 1790
TspGWI ACGGA 2 cut(s) 54, 986
TspRI CASTG 3 cut(s) 34, 97, 1051
Tth111I GACNNNGTC 3 cut(s) 635, 1150, 1498
Van91I CCANNNNNTGG 1 cut(s) 1161
VspI ATTAAT 1 cut(s) 617
XapI RAATTY 5 cut(s) 221, 812, 838, 1310, 1415
XceI RCATGY 2 cut(s) 692, 1141
XmnI GAANNNNTTC 2 cut(s) 435, 468
XspI CTAG 1 cut(s) 71
Zsp2I ATGCAT 1 cut(s) 723
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.