Rmu_ssc0000387.1_g000020

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000387.1
OG0000030
Physical Location & Seq
Reverse (-)
95484 .. 105750
10267 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000387.1_g000020.1.cds

Sequence Viewer

Length: 2940 bp
atgcggaatgcttcaatcggagttcatcggttagccaccttgctccggttgtccctttggcatcctcttgaggcgattctcagtggcggcggcgataaaacgcggcgaagtttgaggattttggacccgatcggttctccaatctccgacgtcggcaaggcttcaaaccgagcttggggagctcagagcagcctccttgatcgatccttggtggaaggtgattcattgattttcacctttgatgtcatgttgatgacaaaggctcctagggggaaagggaatgagtgtgatttggaattcgccatagggttaatcttgcaggttaggataattgtggctaaagcggtggcggcatccttgcagctttacgtaacttttgtgacctcgccgaaggttgttggaaatctcatcagagtaacttttgtttctagctactgtagcttttggtctgccgaagacccgttggagttggccggaggtcggctggagttgactggagacctcgccggagaggagagagagaatgatctgaaacaacagaggcattgggttgtagacgagaaccacaactccggcttgaccttgaaagacaactacttgtcagaacttcgtgcagaggttcaagcgttcattacattgggtagaaggaatttttggtccgggactgtgcagactgctcgatacacaccagacgccggtcgcctgttcgataaaccagaaaggcaaacaggaggtcatgaccggaagcggaagaatgaaaaccataatgtagaaaagaagggaaccgactccgctgttgtattatcaagtgggtcaggcattgatgattgtatgacattacccggtggtaaggaagaatcagacagtcaggttacaatcaggacagcctgccgaggaaaacacttcacaaaaactatgtcttccctatcagctggaaagttagttgcaacaatagaaatggggtttgggtcactttatgaatttcgctgtacgaaagtgaatcttccactttgccaagtgctggttgaaaattttgacgtggcgaactcaagcatcaacattcatggaaggaacctgacaatcacacatgaagactttgaacgcataatgggcgttaggaatggaggttgtgatgtggaggttgaaggaaacaccgaggaccctgatatattggccctggagaggaagatttcggggaaggagaatcagataacaatacatggattgaggagggtgttgattgagtctgaaagcgctgatgagacatttaggatcagctttgccttgtatgcccttgcaaccctgctatctccagtaacaggaatccatgtcgaacgaagatatcttattccacttaaggatccaaatggcatgtgttcaaaaaactggggaaagtttgcatttgataagctcgttgaaggggtgtcattgtttcagggcacgggtattggattggccggaggttgtattttgttccttcagttgttctatctggacgttgttagcaatggcatgtttgttttgccgaagacggtgaaacctgttatgatatggggcgcggacgaggcaaagaaaatttatgagcagtacagtggatcagttgatgctagcacagggataaaaaccaatgtcgtggaagacttgtcagaagtgatgtctgatgtgggtgtcgttaaaggggacatccggaatctaaagtcaatggtcggtcaattgggaccggatatgtgccgtttgaggagcgcaattatgacgttagaaacatctcttgagaagctgaaggctgagggcctctctcagcttgtttcagacactatcatgggagtgtttgaggataagcagaatgattatgtaggcaatgatgggactgatgtttttgttgatggtcaaaagcagcatggtccagaatttgagtcagatgacgatgagatgcctaatgctaaatccaaaattgtcatttccaatgaggtggtagcataccgggatcgcagcactgaggttgagagaaatgaacagacgagtttcgaagcggtggccgagatttcagagagggatgcatacttattggcatatctcttcagcaagaaggtttctgcagacaacagttttgggaggtgtatctcgctgggacctgagctgcttgtccccaacgcagtcgttgactgtcgaggtagcaaccttcaacctaaccctgctatatttaatgtgttatgtttaatgaatgtggttgtcaacatatcagctgcgtacttgtgccagagcggatctgagaactggttcttgccagctacagtgtcggagcgtgctaaggagatttcggcaggtatgctagtggaagctattgtgccttcaaccattacactctgcaaactgggaagatttattggccgattatcgtcatgcaataagatgttcctccccatccatgatggggtagtgaagcattggtttttggctgtggtgaacataccatacgtcgagtgtgaaatatgggacagcaatcctgttgattctgctaatacacgcaggcaggaatatgccattgcatcgatgtgtttgcttgaaaaagtatttggcaatgaactgcgaatggcacccgacctgtacgcacggtttggatcattctccattagttatccagagtcttgccctctgcatcccagatctgaagactccggaatatttgtgataagaaacatgcagttttacagacagcggtggtacctagggtttaactccagcgaccagagggttcgtatggcacttgagattgtcaatcaccctacgaatgaaattcgtgaacgggtgtggagtgccgccgccgagaaagtcccatatgatgtacctaccacgggcgtgccaccattatctctgaaggaggatgcagttctcccaactacgggcatgaagttcaatccacgccggtccaggcgcggatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

979

Amino Acids

108.36

Weight (kDa)

5.77

Isoelectric Point (pI)

40.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 153
Acc36I ACCTGC 2 cut(s) 310, 2312
Acc65I GGTACC 1 cut(s) 2721
AccB1I GGYRCC 2 cut(s) 2593, 2721
AccB7I CCANNNNNTGG 1 cut(s) 1021
AccBSI CCGCTC 1 cut(s) 2262
AccI GTMKAC 1 cut(s) 555
AccII CGCG 3 cut(s) 103, 1559, 2934
AccIII TCCGGA 2 cut(s) 1686, 2675
AclWI GGATC 8 cut(s) 198, 1280, 1355, 1368, 1603, 1992, 2272, 2626
AcoI YGGCCR 4 cut(s) 471, 1455, 2034, 2386
AcsI RAATTY 7 cut(s) 296, 649, 980, 1030, 1575, 1907, 2793
AcuI CTGAAG 5 cut(s) 1463, 1799, 2062, 2688, 2894
AcyI GRCGYC 2 cut(s) 150, 693
AfaI GTAC 6 cut(s) 991, 1589, 2249, 2606, 2723, 2844
AfeI AGCGCT 1 cut(s) 1255
AflII CTTAAG 1 cut(s) 1355
AjiI CACGTC 1 cut(s) 1039
AjnI CCWGG 2 cut(s) 1176, 2927
AjuI GAANNNNNNNTTGG 6 cut(s) 637, 669, 948, 980, 2556, 2588
AleI CACNNNNGTG 1 cut(s) 2855
AloI GAACNNNNNNTCC 2 cut(s) 554, 586
Alw21I GWGCWC 1 cut(s) 184
Alw26I GTCTC 2 cut(s) 492, 1256
AlwI GGATC 8 cut(s) 198, 1280, 1355, 1368, 1603, 1992, 2272, 2626
Aor13HI TCCGGA 2 cut(s) 1686, 2675
Aor51HI AGCGCT 1 cut(s) 1255
AoxI GGCC 6 cut(s) 471, 1173, 1455, 1789, 2034, 2386
ApeKI GCWGC 6 cut(s) 189, 361, 1894, 1989, 2137, 2243
ApoI RAATTY 7 cut(s) 296, 649, 980, 1030, 1575, 1907, 2793
ArsI GACNNNNNNTTYG 6 cut(s) 718, 750, 902, 934, 2090, 2122
Asp700I GAANNNNTTC 1 cut(s) 2276
Asp718I GGTACC 1 cut(s) 2721
AspA2I CCTAGG 2 cut(s) 266, 2725
AspLEI GCGC 4 cut(s) 1256, 1559, 1745, 2934
AspS9I GGNCC 9 cut(s) 124, 657, 1159, 1174, 1718, 1789, 1901, 2129, 2925
AsuC2I CCSGG 3 cut(s) 661, 843, 1982
AsuHPI GGTGA 5 cut(s) 226, 230, 1546, 2473, 2771
AsuII TTCGAA 1 cut(s) 2025
AsuNHI GCTAGC 1 cut(s) 1607
AvaII GGWCC 7 cut(s) 124, 657, 1159, 1718, 1901, 2129, 2925
AvrII CCTAGG 2 cut(s) 266, 2725
BaeGI GKGCMC 1 cut(s) 1442
BamHI GGATCC 1 cut(s) 1360
BanI GGYRCC 2 cut(s) 2593, 2721
BanII GRGCYC 1 cut(s) 184
BbsI GAAGAC 6 cut(s) 462, 912, 1098, 1535, 1644, 2676
Bbv12I GWGCWC 1 cut(s) 184
BbvCI CCTCAGC 1 cut(s) 1785
BbvI GCAGC 6 cut(s) 201, 373, 1906, 2001, 2124, 2230
BccI CCATC 4 cut(s) 1856, 1877, 2423, 2429
BceAI ACGGC 1 cut(s) 1716
BcgI CGANNNNNNTGC 4 cut(s) 659, 693, 2539, 2573
BciT130I CCWGG 2 cut(s) 1178, 2929
BcnI CCSGG 3 cut(s) 661, 843, 1982
BcoDI GTCTC 2 cut(s) 492, 1256
BfaI CTAG 5 cut(s) 267, 429, 1608, 2330, 2726
BfmI CTRYAG 3 cut(s) 436, 2094, 2289
BfoI RGCGCY 1 cut(s) 1257
BfrI CTTAAG 1 cut(s) 1355
BfuAI ACCTGC 2 cut(s) 310, 2312
BglII AGATCT 1 cut(s) 2663
BlnI CCTAGG 2 cut(s) 266, 2725
Bme1390I CCNGG 5 cut(s) 661, 843, 1178, 1982, 2929
Bme18I GGWCC 7 cut(s) 124, 657, 1159, 1718, 1901, 2129, 2925
BmgBI CACGTC 1 cut(s) 1039
BmgT120I GGNCC 9 cut(s) 124, 657, 1159, 1174, 1718, 1789, 1901, 2129, 2925
BmrFI CCNGG 5 cut(s) 661, 843, 1178, 1982, 2929
BmrI ACTGGG 2 cut(s) 1396, 2381
BmsI GCATC 9 cut(s) 70, 362, 1062, 1594, 1920, 2044, 2555, 2665, 2872
BmtI GCTAGC 1 cut(s) 1611
BmuI ACTGGG 2 cut(s) 1396, 2381
BoxI GACNNNNGTC 1 cut(s) 696
BpiI GAAGAC 6 cut(s) 462, 912, 1098, 1535, 1644, 2676
BplI GAGNNNNNCTC 2 cut(s) 1778, 1810
BpmI CTGGAG 5 cut(s) 506, 516, 1199, 1296, 2722
Bpu10I CCTNAGC 3 cut(s) 1785, 2133, 2307
Bpu14I TTCGAA 1 cut(s) 2025
BpuEI CTTGAG 4 cut(s) 89, 1033, 1790, 2786
BpuMI CCSGG 3 cut(s) 661, 843, 1982
Bsa29I ATCGAT 2 cut(s) 202, 2549
BsaAI YACGTR 1 cut(s) 370
BsaHI GRCGYC 2 cut(s) 150, 693
BsaI GGTCTC 1 cut(s) 492
BsaJI CCNNGG 7 cut(s) 207, 266, 892, 1155, 1176, 2725, 2850
BsaWI WCCGGW 5 cut(s) 45, 741, 1686, 1720, 2675
BsaXI ACNNNNNCTCC 4 cut(s) 247, 277, 554, 584
Bse118I RCCGGY 2 cut(s) 695, 2922
Bse1I ACTGG 5 cut(s) 499, 1313, 1391, 2279, 2376
Bse3DI GCAATG 4 cut(s) 1513, 1864, 2541, 2584
BseAI TCCGGA 2 cut(s) 1686, 2675
BseBI CCWGG 2 cut(s) 1178, 2929
BseCI ATCGAT 2 cut(s) 202, 2549
BseDI CCNNGG 7 cut(s) 207, 266, 892, 1155, 1176, 2725, 2850
BseGI GGATG 7 cut(s) 61, 353, 1683, 2059, 2421, 2656, 2887
BseMI GCAATG 4 cut(s) 1513, 1864, 2541, 2584
BseMII CTCAG 7 cut(s) 94, 197, 1776, 1811, 1986, 2124, 2259
BseNI ACTGG 5 cut(s) 499, 1313, 1391, 2279, 2376
BseRI GAGGAG 3 cut(s) 527, 1243, 1753
BseSI GKGCMC 1 cut(s) 1442
BseXI GCAGC 6 cut(s) 201, 373, 1906, 2001, 2124, 2230
BseYI CCCAGC 1 cut(s) 2125
BsgI GTGCAG 2 cut(s) 633, 689
Bsh1236I CGCG 3 cut(s) 103, 1559, 2934
Bsh1285I CGRYCG 2 cut(s) 132, 700
BshFI GGCC 6 cut(s) 473, 1175, 1457, 1791, 2036, 2388
BshNI GGYRCC 2 cut(s) 2593, 2721
BshVI ATCGAT 2 cut(s) 202, 2549
BsiEI CGRYCG 2 cut(s) 132, 700
BsiHKAI GWGCWC 1 cut(s) 184
BslFI GGGAC 9 cut(s) 37, 676, 1694, 1731, 1879, 2129, 2142, 2507, 2816
BsmAI GTCTC 2 cut(s) 492, 1256
BsmFI GGGAC 9 cut(s) 37, 676, 1694, 1731, 1879, 2129, 2142, 2507, 2816
BsmI GAATGC 1 cut(s) 13
BsnI GGCC 6 cut(s) 473, 1175, 1457, 1791, 2036, 2388
Bso31I GGTCTC 1 cut(s) 492
Bsp119I TTCGAA 1 cut(s) 2025
Bsp1286I GDGCHC 2 cut(s) 184, 1442
Bsp13I TCCGGA 2 cut(s) 1686, 2675
BspANI GGCC 6 cut(s) 473, 1175, 1457, 1791, 2036, 2388
BspCNI CTCAG 7 cut(s) 93, 196, 1777, 1810, 1987, 2125, 2260
BspDI ATCGAT 2 cut(s) 202, 2549
BspEI TCCGGA 2 cut(s) 1686, 2675
BspFNI CGCG 3 cut(s) 103, 1559, 2934
BspHI TCATGA 1 cut(s) 736
BspMAI CTGCAG 1 cut(s) 2098
BspMI ACCTGC 2 cut(s) 310, 2312
BspOI GCTAGC 1 cut(s) 1611
BspPI GGATC 8 cut(s) 198, 1280, 1355, 1368, 1603, 1992, 2272, 2626
BspT104I TTCGAA 1 cut(s) 2025
BspT107I GGYRCC 2 cut(s) 2593, 2721
BspTI CTTAAG 1 cut(s) 1355
BspTNI GGTCTC 1 cut(s) 492
BsrBI CCGCTC 1 cut(s) 2262
BsrDI GCAATG 4 cut(s) 1513, 1864, 2541, 2584
BsrFI RCCGGY 2 cut(s) 695, 2922
BsrI ACTGG 5 cut(s) 499, 1313, 1391, 2279, 2376
BssAI RCCGGY 2 cut(s) 695, 2922
BssECI CCNNGG 7 cut(s) 207, 266, 892, 1155, 1176, 2725, 2850
BssNI GRCGYC 2 cut(s) 150, 693
BssT1I CCWWGG 3 cut(s) 207, 266, 2725
Bst2UI CCWGG 2 cut(s) 1178, 2929
Bst4CI ACNGT 9 cut(s) 437, 667, 866, 1534, 1592, 2105, 2165, 2293, 2613
Bst6I CTCTTC 1 cut(s) 2081
BstACI GRCGYC 2 cut(s) 150, 693
BstAFI CTTAAG 1 cut(s) 1355
BstBAI YACGTR 1 cut(s) 370
BstBI TTCGAA 1 cut(s) 2025
BstC8I GCNNGC 6 cut(s) 889, 1609, 2286, 2304, 2528, 2858
BstDEI CTNAG 8 cut(s) 80, 183, 1785, 1797, 1995, 2133, 2268, 2307
BstDSI CCRYGG 1 cut(s) 2850
BstF5I GGATG 7 cut(s) 61, 353, 1683, 2059, 2421, 2656, 2887
BstFNI CGCG 3 cut(s) 103, 1559, 2934
BstH2I RGCGCY 1 cut(s) 1257
BstHHI GCGC 4 cut(s) 1256, 1559, 1745, 2934
BstMAI GTCTC 2 cut(s) 492, 1256
BstMCI CGRYCG 2 cut(s) 132, 700
BstMWI GCNNNNNNNGC 6 cut(s) 179, 350, 438, 1110, 1289, 1565
BstNI CCWGG 2 cut(s) 1178, 2929
BstNSI RCATGY 3 cut(s) 1375, 1516, 2701
BstPAI GACNNNNGTC 1 cut(s) 696
BstSCI CCNGG 5 cut(s) 659, 841, 1176, 1980, 2927
BstSFI CTRYAG 3 cut(s) 436, 2094, 2289
BstSLI GKGCMC 1 cut(s) 1442
BstSNI TACGTA 1 cut(s) 370
BstUI CGCG 3 cut(s) 103, 1559, 2934
BstV1I GCAGC 6 cut(s) 201, 373, 1906, 2001, 2124, 2230
BstV2I GAAGAC 6 cut(s) 462, 912, 1098, 1535, 1644, 2676
BstX2I RGATCY 3 cut(s) 1360, 2264, 2663
BstXI CCANNNNNNTGG 2 cut(s) 1633, 1969
BstYI RGATCY 3 cut(s) 1360, 2264, 2663
Bsu15I ATCGAT 2 cut(s) 202, 2549
BsuRI GGCC 6 cut(s) 473, 1175, 1457, 1791, 2036, 2388
BsuTUI ATCGAT 2 cut(s) 202, 2549
BtgI CCRYGG 1 cut(s) 2850
BtrI CACGTC 1 cut(s) 1039
BtsCI GGATG 7 cut(s) 61, 353, 1683, 2059, 2421, 2656, 2887
BtsIMutI CAGTG 4 cut(s) 88, 1597, 1992, 2298
BveI ACCTGC 2 cut(s) 310, 2312
Cac8I GCNNGC 6 cut(s) 889, 1609, 2286, 2304, 2528, 2858
CciI TCATGA 1 cut(s) 736
CfoI GCGC 4 cut(s) 1256, 1559, 1745, 2934
Cfr10I RCCGGY 2 cut(s) 695, 2922
Cfr13I GGNCC 9 cut(s) 124, 657, 1159, 1174, 1718, 1789, 1901, 2129, 2925
ClaI ATCGAT 2 cut(s) 202, 2549
CseI GACGC 1 cut(s) 701
Csp6I GTAC 6 cut(s) 990, 1588, 2248, 2605, 2722, 2843
CviQI GTAC 6 cut(s) 990, 1588, 2248, 2605, 2722, 2843
DdeI CTNAG 8 cut(s) 80, 183, 1785, 1797, 1995, 2133, 2268, 2307
EaeI YGGCCR 4 cut(s) 471, 1455, 2034, 2386
Eam1104I CTCTTC 1 cut(s) 2081
EarI CTCTTC 1 cut(s) 2081
Ecl136II GAGCTC 1 cut(s) 182
Eco105I TACGTA 1 cut(s) 370
Eco130I CCWWGG 3 cut(s) 207, 266, 2725
Eco24I GRGCYC 1 cut(s) 184
Eco31I GGTCTC 1 cut(s) 492
Eco32I GATATC 1 cut(s) 1343
Eco47I GGWCC 7 cut(s) 124, 657, 1159, 1718, 1901, 2129, 2925
Eco47III AGCGCT 1 cut(s) 1255
Eco53kI GAGCTC 1 cut(s) 182
Eco57I CTGAAG 5 cut(s) 1463, 1799, 2062, 2688, 2894
EcoICRI GAGCTC 1 cut(s) 182
EcoO109I RGGNCCY 3 cut(s) 1159, 1789, 2129
EcoRI GAATTC 1 cut(s) 296
EcoRII CCWGG 2 cut(s) 1176, 2927
EcoRV GATATC 1 cut(s) 1343
EcoT14I CCWWGG 3 cut(s) 207, 266, 2725
EcoT22I ATGCAT 1 cut(s) 2059
EcoT38I GRGCYC 1 cut(s) 184
ErhI CCWWGG 3 cut(s) 207, 266, 2725
FalI AAGNNNNNCTT 2 cut(s) 987, 1019
FaqI GGGAC 9 cut(s) 37, 676, 1694, 1731, 1879, 2129, 2142, 2507, 2816
FauNDI CATATG 1 cut(s) 2836
FblI GTMKAC 1 cut(s) 555
FokI GGATG 7 cut(s) 48, 340, 1670, 2066, 2408, 2643, 2894
FriOI GRGCYC 1 cut(s) 184
FspBI CTAG 5 cut(s) 267, 429, 1608, 2330, 2726
GlaI GCGC 4 cut(s) 1255, 1558, 1744, 2933
GsaI CCCAGC 1 cut(s) 2129
GsuI CTGGAG 5 cut(s) 506, 516, 1199, 1296, 2722
HaeII RGCGCY 1 cut(s) 1257
HaeIII GGCC 6 cut(s) 473, 1175, 1457, 1791, 2036, 2388
HgaI GACGC 1 cut(s) 701
HhaI GCGC 4 cut(s) 1256, 1559, 1745, 2934
Hin1I GRCGYC 2 cut(s) 150, 693
Hin6I GCGC 4 cut(s) 1254, 1557, 1743, 2932
HinP1I GCGC 4 cut(s) 1254, 1557, 1743, 2932
HincII GTYRAC 3 cut(s) 492, 2161, 2233
HindII GTYRAC 3 cut(s) 492, 2161, 2233
HphI GGTGA 5 cut(s) 226, 230, 1546, 2473, 2771
Hpy166II GTNNAC 6 cut(s) 492, 556, 2161, 2233, 2464, 2801
Hpy8I GTNNAC 6 cut(s) 492, 556, 2161, 2233, 2464, 2801
Hpy99I CGWCG 3 cut(s) 152, 155, 2480
HpyCH4III ACNGT 9 cut(s) 437, 667, 866, 1534, 1592, 2105, 2165, 2293, 2613
HpyCH4IV ACGT 6 cut(s) 150, 369, 1038, 1497, 1754, 2475
HpyF10VI GCNNNNNNNGC 6 cut(s) 179, 350, 438, 1110, 1289, 1565
HpyF3I CTNAG 8 cut(s) 80, 183, 1785, 1797, 1995, 2133, 2268, 2307
HpySE526I ACGT 6 cut(s) 150, 369, 1038, 1497, 1754, 2475
Hsp92I GRCGYC 2 cut(s) 150, 693
HspAI GCGC 4 cut(s) 1254, 1557, 1743, 2932
Kpn2I TCCGGA 2 cut(s) 1686, 2675
KpnI GGTACC 1 cut(s) 2725
LmnI GCTCC 5 cut(s) 48, 179, 268, 1740, 2299
Lsp1109I GCAGC 6 cut(s) 201, 373, 1906, 2001, 2124, 2230
LweI GCATC 9 cut(s) 70, 362, 1062, 1594, 1920, 2044, 2555, 2665, 2872
MaeI CTAG 5 cut(s) 267, 429, 1608, 2330, 2726
MaeII ACGT 6 cut(s) 150, 369, 1038, 1497, 1754, 2475
MaeIII GTNAC 6 cut(s) 370, 379, 415, 871, 969, 1315
MbiI CCGCTC 1 cut(s) 2262
MfeI CAATTG 1 cut(s) 1712
MflI RGATCY 3 cut(s) 1360, 2264, 2663
MhlI GDGCHC 2 cut(s) 184, 1442
MlyI GAGTC 5 cut(s) 782, 1253, 1922, 2651, 2666
MmeI TCCRAC 4 cut(s) 171, 379, 444, 2277
Mph1103I ATGCAT 1 cut(s) 2059
MroI TCCGGA 2 cut(s) 1686, 2675
MroXI GAANNNNTTC 1 cut(s) 2276
MseI TTAA 6 cut(s) 311, 1356, 1674, 2202, 2216, 2733
MslI CAYNNNNRTG 5 cut(s) 251, 1817, 1823, 2551, 2855
MspA1I CMGCKG 4 cut(s) 794, 932, 2243, 2716
MspCI CTTAAG 1 cut(s) 1355
MspR9I CCNGG 5 cut(s) 661, 843, 1178, 1982, 2929
MunI CAATTG 1 cut(s) 1712
Mva1269I GAATGC 1 cut(s) 13
MvaI CCWGG 2 cut(s) 1178, 2929
MvnI CGCG 3 cut(s) 103, 1559, 2934
MwoI GCNNNNNNNGC 6 cut(s) 179, 350, 438, 1110, 1289, 1565
NciI CCSGG 3 cut(s) 661, 843, 1982
NdeI CATATG 1 cut(s) 2836
NheI GCTAGC 1 cut(s) 1607
NmeAIII GCCGAG 3 cut(s) 917, 2062, 2848
NmuCI GTSAC 2 cut(s) 379, 969
NsiI ATGCAT 1 cut(s) 2059
NspI RCATGY 3 cut(s) 1375, 1516, 2701
NspV TTCGAA 1 cut(s) 2025
OliI CACNNNNGTG 1 cut(s) 2855
PagI TCATGA 1 cut(s) 736
PctI GAATGC 1 cut(s) 13
PdmI GAANNNNTTC 1 cut(s) 2276
PfeI GAWTC 8 cut(s) 76, 221, 857, 1000, 1204, 1323, 1690, 2510
PflMI CCANNNNNTGG 1 cut(s) 1021
PfoI TCCNGGA 1 cut(s) 659
Ple19I CGATCG 1 cut(s) 132
PleI GAGTC 5 cut(s) 782, 1252, 1921, 2650, 2666
PpsI GAGTC 5 cut(s) 782, 1252, 1921, 2650, 2666
Ppu21I YACGTR 1 cut(s) 370
PpuMI RGGWCCY 2 cut(s) 1159, 2129
PshAI GACNNNNGTC 1 cut(s) 696
Psp124BI GAGCTC 1 cut(s) 184
Psp5II RGGWCCY 2 cut(s) 1159, 2129
Psp6I CCWGG 2 cut(s) 1176, 2927
PspFI CCCAGC 1 cut(s) 2125
PspGI CCWGG 2 cut(s) 1176, 2927
PspPI GGNCC 9 cut(s) 124, 657, 1159, 1174, 1718, 1789, 1901, 2129, 2925
PspPPI RGGWCCY 2 cut(s) 1159, 2129
PsrI GAACNNNNNNTAC 2 cut(s) 2456, 2488
PstI CTGCAG 1 cut(s) 2098
PsuI RGATCY 3 cut(s) 1360, 2264, 2663
PvuI CGATCG 1 cut(s) 132
PvuII CAGCTG 2 cut(s) 932, 2243
RsaI GTAC 6 cut(s) 991, 1589, 2249, 2606, 2723, 2844
RsaNI GTAC 6 cut(s) 990, 1588, 2248, 2605, 2722, 2843
RseI CAYNNNNRTG 5 cut(s) 251, 1817, 1823, 2551, 2855
SacI GAGCTC 1 cut(s) 184
SaqAI TTAA 6 cut(s) 311, 1356, 1674, 2202, 2216, 2733
Sau96I GGNCC 9 cut(s) 124, 657, 1159, 1174, 1718, 1789, 1901, 2129, 2925
SchI GAGTC 5 cut(s) 782, 1253, 1922, 2651, 2666
ScrFI CCNGG 5 cut(s) 661, 843, 1178, 1982, 2929
SduI GDGCHC 2 cut(s) 184, 1442
SfaNI GCATC 9 cut(s) 70, 362, 1062, 1594, 1920, 2044, 2555, 2665, 2872
SfcI CTRYAG 3 cut(s) 436, 2094, 2289
SfuI TTCGAA 1 cut(s) 2025
SinI GGWCC 7 cut(s) 124, 657, 1159, 1718, 1901, 2129, 2925
SmiMI CAYNNNNRTG 5 cut(s) 251, 1817, 1823, 2551, 2855
SmlI CTYRAG 5 cut(s) 68, 1048, 1355, 1769, 2765
SmoI CTYRAG 5 cut(s) 68, 1048, 1355, 1769, 2765
SnaBI TACGTA 1 cut(s) 370
SspI AATATT 1 cut(s) 2682
SspMI CTAG 5 cut(s) 267, 429, 1608, 2330, 2726
SstI GAGCTC 1 cut(s) 184
StyD4I CCNGG 5 cut(s) 659, 841, 1176, 1980, 2927
StyI CCWWGG 3 cut(s) 207, 266, 2725
TaaI ACNGT 9 cut(s) 437, 667, 866, 1534, 1592, 2105, 2165, 2293, 2613
TaiI ACGT 6 cut(s) 153, 372, 1041, 1500, 1757, 2478
TaqI TCGA 8 cut(s) 202, 679, 708, 1332, 2025, 2167, 2478, 2549
TaqII GACCGA 1 cut(s) 1697
TatI WGTACW 1 cut(s) 1587
TauI GCSGC 6 cut(s) 90, 93, 106, 353, 2819, 2822
TfiI GAWTC 8 cut(s) 76, 221, 857, 1000, 1204, 1323, 1690, 2510
Tru1I TTAA 6 cut(s) 311, 1356, 1674, 2202, 2216, 2733
Tru9I TTAA 6 cut(s) 311, 1356, 1674, 2202, 2216, 2733
TscAI CASTG 4 cut(s) 88, 1597, 1999, 2298
TseFI GTSAC 2 cut(s) 379, 969
TseI GCWGC 6 cut(s) 189, 361, 1894, 1989, 2137, 2243
Tsp45I GTSAC 2 cut(s) 379, 969
TspRI CASTG 4 cut(s) 88, 1597, 1999, 2298
Van91I CCANNNNNTGG 1 cut(s) 1021
Vha464I CTTAAG 1 cut(s) 1355
VpaK11BI GGWCC 7 cut(s) 124, 657, 1159, 1718, 1901, 2129, 2925
XapI RAATTY 7 cut(s) 296, 649, 980, 1030, 1575, 1907, 2793
XceI RCATGY 3 cut(s) 1375, 1516, 2701
XmaJI CCTAGG 2 cut(s) 266, 2725
XmiI GTMKAC 1 cut(s) 555
XmnI GAANNNNTTC 1 cut(s) 2276
XspI CTAG 5 cut(s) 267, 429, 1608, 2330, 2726
ZraI GACGTC 1 cut(s) 151
Zsp2I ATGCAT 1 cut(s) 2059
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.