Rw1G000300

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000030
Physical Location & Seq
Reverse (-)
409197 .. 412176
2980 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G000300.1

Sequence Viewer

Length: 2031 bp
ATGAAGGAATTTACAGCAATATGTACTGGTTTGTCAGAAGAGAAGCAAATAGCAATTGATGCTACTGGTTTTGGGGCTATATACACGTTCAGGTGCAGCGAATTGAATGTCCATCTATGCCACATGATGTGCAATAAATTTGATGTTGAAAACTCAACAATCAAGATTCACGGGACACATTTAAGGGTCACCTCTGAAGACTTCCGTCATGTAATGAGTCTAAGGGATGGTGGGGCAGACGTAGATATAAGTGGAAGCTTGGATGCAACTGACATTGTAGAGTTGAAGGCTAAATTTGGTGGTGCTGACAAGGAAATAAGCTTGGATGTTGTGGGGAAGATGGTGGTGCAATCAGAAAATGCTGATGATACATTTATAATCAGTTTCTGCATGTATGCCCTGTCAACTATTATTATGCCAACTGAAAGTGATGCAGTGGATCCCAGGCTACTTATCGCTGTAAAGGATCCAAAAACAATTAGCACCAAAAATTGGGCCTTTGCATTTAGAAATCTTATTGATGGACTTAGAAGGTATAAGAATGGGGCGGCATCAATGGTCTATGGGTGTATTGCATTTTTGCAGCTGTTCTATTTGGATATAATGCTAAAGAAGTTGCTTGTTGTTCCGACATACACATCACCAGTACTATGTTGGAATAACAAGCAGGTAAGAATAATGTACGACCAGGCAGAGGCTGATGGGGGTTATTACTCTACTGGTATAATAGCAACGAAACGTTGGTCAGCAATTAGATTCCTTGATAATGCCGGATCTGTTGATGCCAGCACAGGGCTGAAAACAACAATTGTTGAAGATCTAGATAAGGTTAGGAGCGATGTTGAAGGTTTCAAAAGCGAATTTGAGGAGGTTAGATCTTGCATATCGCATATAGAACTGGACATGGTCGGCCTCCGCAATGCTATTATGACACTACAGACATGTATTTCTGAAATGAGGGACGAAGGGATTAGTAACATGGTTGTTGAAGTGATGAAGGAAGTCTTTGATGAGGAGGGTCCAATTGGGCACAGAGAGGGGGATGAATGTGATATGTTTGAAGATGACATAGTTATCCGTAAGGCGGGATCGTCAAGTGTTGATGGGCCTCATCAGCCTAATAAGTTTGATATTGAGAACAGAAGCGTGTCATTGAAGCGAAAGTCAGAAAACAGTGCTGACGATGAAAACATGATACTGAATTTATGTGGAGTTGCTGATATATCCAATAGTGAATCATTTTTGATTACTTACTTATTCAGCAAGGTCATGACTGAGTCTAACAGTCTTGCAAGGGAGGTTGCAAGGTATGGCGATCATATTTTATACCTGTTTGAAAAAACAAGCGACAGCTGGTTCATGCCAACTTATTTTTCAGAACGGGCTAAGGATTACGCAAGTGGTAGTGTTGTGGACGGTATGCTATCATTAGTGTTGACTATATGTCAGCTTCGTAGATATACCGGTCATTTGGGTTCTTGCAAGCAGATATTTTTCCCCCTCCATGACAGTGTTGTGGACAAATGGATCTTAGTGGTTTTGAACCTCGATGTGGGAGAATGTGAGATTTGGGACAGCTGCCCTGACATTGATGGCAGACAGCGTCAGGAGTCTTATGCAAATACTATTGTGGAGCTCTTTCAGAAGGTGTTTTGTAATGCAATTAGATTGTTGCCGGCATTGTATGCAAGACTAGCCTCAGTGTCCACAGTGTATCCAAAAGAAGCCGCGACCAACCCAAACATTGAGGATTCTGGTATATTTTTAATCAGGAACATGCAGTATTACTGGAAACGCTGGTTCGAACCGTTCAACTCAGCCGACCAGAGGATCCGTCTTACCCTTGACATAGTCACACACCTAATGAATGCAGTCCGTGTTTTTGTATGGGCAGCAGCTGCTCAGGAAACTCCAATTGACGCTACATCACTTGGACGTGCAGCATACAACGGGAACCTCTTCTCTAATTGCCATATCCCACTTGATATTTCAGGAATCAAATTTAAGGCACGCCGCACTACGAGGCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

676

Amino Acids

76.04

Weight (kDa)

5.19

Isoelectric Point (pI)

43.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 377
Acc36I ACCTGC 1 cut(s) 658
AccB7I CCANNNNNTGG 1 cut(s) 492
AccII CGCG 1 cut(s) 1730
AciI CCGC 5 cut(s) 548, 916, 1085, 1728, 2014
AclI AACGTT 1 cut(s) 739
AclWI GGATC 9 cut(s) 434, 447, 461, 474, 781, 1096, 1535, 1825, 1838
AcsI RAATTY 6 cut(s) 8, 137, 293, 860, 1201, 2000
AcuI CTGAAG 1 cut(s) 216
AfaI GTAC 3 cut(s) 25, 648, 683
AfiI CCNNNNNNNGG 6 cut(s) 492, 694, 792, 1084, 1552, 1827
AflIII ACRYGT 2 cut(s) 84, 941
AgeI ACCGGT 1 cut(s) 1463
AhdI GACNNNNNGTC 1 cut(s) 1443
AjiI CACGTC 1 cut(s) 1937
AjnI CCWGG 2 cut(s) 443, 687
AjuI GAANNNNNNNTTGG 2 cut(s) 1357, 1389
AluBI AGCT 8 cut(s) 258, 321, 586, 1353, 1450, 1578, 1636, 1898
AluI AGCT 8 cut(s) 258, 321, 586, 1353, 1450, 1578, 1636, 1898
Alw21I GWGCWC 1 cut(s) 1638
AlwI GGATC 9 cut(s) 434, 447, 461, 474, 781, 1096, 1535, 1825, 1838
AlwNI CAGNNNCTG 3 cut(s) 387, 698, 1898
AoxI GGCC 3 cut(s) 495, 910, 1106
ApeKI GCWGC 7 cut(s) 96, 583, 1578, 1892, 1895, 1898, 1940
ApoI RAATTY 6 cut(s) 8, 137, 293, 860, 1201, 2000
ArsI GACNNNNNNTTYG 4 cut(s) 93, 125, 728, 760
AsiGI ACCGGT 1 cut(s) 1463
Asp700I GAANNNNTTC 1 cut(s) 1958
AspS9I GGNCC 3 cut(s) 495, 1019, 1106
AsuHPI GGTGA 2 cut(s) 181, 633
AsuII TTCGAA 1 cut(s) 1803
AvaII GGWCC 1 cut(s) 1019
BaeGI GKGCMC 1 cut(s) 1032
BamHI GGATCC 3 cut(s) 439, 466, 1830
BanII GRGCYC 1 cut(s) 1638
BbsI GAAGAC 1 cut(s) 204
Bbv12I GWGCWC 1 cut(s) 1638
BbvI GCAGC 7 cut(s) 108, 595, 1565, 1885, 1904, 1907, 1952
BccI CCATC 7 cut(s) 120, 221, 334, 515, 695, 1097, 1586
BciT130I CCWGG 2 cut(s) 445, 689
BciVI GTATCC 1 cut(s) 1725
BfaI CTAG 2 cut(s) 821, 1694
BfmI CTRYAG 1 cut(s) 935
BfuAI ACCTGC 1 cut(s) 658
BfuI GTATCC 1 cut(s) 1725
BglII AGATCT 2 cut(s) 817, 875
BmcAI AGTACT 1 cut(s) 648
Bme1390I CCNGG 2 cut(s) 445, 689
Bme18I GGWCC 1 cut(s) 1019
BmeRI GACNNNNNGTC 1 cut(s) 1443
BmgBI CACGTC 1 cut(s) 1937
BmgT120I GGNCC 3 cut(s) 495, 1019, 1106
BmiI GGNNCC 5 cut(s) 441, 468, 1020, 1832, 1955
BmrFI CCNGG 2 cut(s) 445, 689
BmsI GCATC 5 cut(s) 49, 253, 421, 560, 772
BoxI GACNNNNGTC 1 cut(s) 204
BpiI GAAGAC 1 cut(s) 204
Bpu10I CCTNAGC 2 cut(s) 1386, 1902
Bpu14I TTCGAA 1 cut(s) 1803
BsaJI CCNNGG 1 cut(s) 443
BsaWI WCCGGW 1 cut(s) 1463
Bsc4I CCNNNNNNNGG 6 cut(s) 492, 694, 792, 1084, 1552, 1827
Bse118I RCCGGY 2 cut(s) 1463, 1675
Bse1I ACTGG 6 cut(s) 31, 70, 644, 724, 903, 1793
Bse3DI GCAATG 1 cut(s) 925
BseBI CCWGG 2 cut(s) 445, 689
BseDI CCNNGG 1 cut(s) 443
BseGI GGATG 4 cut(s) 232, 268, 331, 1048
BseLI CCNNNNNNNGG 6 cut(s) 492, 694, 792, 1084, 1552, 1827
BseMI GCAATG 1 cut(s) 925
BseMII CTCAG 4 cut(s) 1266, 1713, 1830, 1916
BseNI ACTGG 6 cut(s) 31, 70, 644, 724, 903, 1793
BseRI GAGGAG 2 cut(s) 881, 1028
BseSI GKGCMC 1 cut(s) 1032
BseXI GCAGC 7 cut(s) 108, 595, 1565, 1885, 1904, 1907, 1952
BsgI GTGCAG 2 cut(s) 115, 1959
Bsh1236I CGCG 1 cut(s) 1730
BshFI GGCC 3 cut(s) 497, 912, 1108
BshTI ACCGGT 1 cut(s) 1463
BsiHKAI GWGCWC 1 cut(s) 1638
BsiSI CCGG 3 cut(s) 771, 1464, 1676
BslFI GGGAC 3 cut(s) 187, 974, 1586
BslI CCNNNNNNNGG 6 cut(s) 492, 694, 792, 1084, 1552, 1827
BsmFI GGGAC 3 cut(s) 187, 974, 1586
BsmI GAATGC 1 cut(s) 1873
BsnI GGCC 3 cut(s) 497, 912, 1108
Bsp119I TTCGAA 1 cut(s) 1803
Bsp1286I GDGCHC 2 cut(s) 1032, 1638
Bsp143I GATC 9 cut(s) 439, 466, 773, 817, 875, 1088, 1315, 1527, 1830
BspACI CCGC 5 cut(s) 548, 916, 1085, 1728, 2014
BspANI GGCC 3 cut(s) 497, 912, 1108
BspCNI CTCAG 4 cut(s) 1267, 1712, 1829, 1915
BspFNI CGCG 1 cut(s) 1730
BspHI TCATGA 1 cut(s) 1269
BspLI GGNNCC 5 cut(s) 441, 468, 1020, 1832, 1955
BspMI ACCTGC 1 cut(s) 658
BspPI GGATC 9 cut(s) 434, 447, 461, 474, 781, 1096, 1535, 1825, 1838
BspT104I TTCGAA 1 cut(s) 1803
BsrDI GCAATG 1 cut(s) 925
BsrFI RCCGGY 2 cut(s) 1463, 1675
BsrI ACTGG 6 cut(s) 31, 70, 644, 724, 903, 1793
BssAI RCCGGY 2 cut(s) 1463, 1675
BssECI CCNNGG 1 cut(s) 443
BssMI GATC 9 cut(s) 439, 466, 773, 817, 875, 1088, 1315, 1527, 1830
Bst2UI CCWGG 2 cut(s) 445, 689
Bst4CI ACNGT 6 cut(s) 1175, 1286, 1418, 1511, 1711, 1809
Bst6I CTCTTC 2 cut(s) 33, 1964
BstAPI GCANNNNNTGC 3 cut(s) 59, 1685, 1898
BstBI TTCGAA 1 cut(s) 1803
BstC8I GCNNGC 4 cut(s) 787, 1484, 1677, 2011
BstDEI CTNAG 8 cut(s) 221, 527, 1275, 1386, 1531, 1699, 1816, 1902
BstEII GGTNACC 1 cut(s) 187
BstF5I GGATG 4 cut(s) 232, 268, 331, 1048
BstFNI CGCG 1 cut(s) 1730
BstKTI GATC 9 cut(s) 442, 469, 776, 820, 878, 1091, 1318, 1530, 1833
BstMBI GATC 9 cut(s) 439, 466, 773, 817, 875, 1088, 1315, 1527, 1830
BstMWI GCNNNNNNNGC 5 cut(s) 59, 1114, 1685, 1694, 1898
BstNI CCWGG 2 cut(s) 445, 689
BstNSI RCATGY 3 cut(s) 394, 945, 1780
BstPAI GACNNNNGTC 1 cut(s) 204
BstPI GGTNACC 1 cut(s) 187
BstSCI CCNGG 2 cut(s) 443, 687
BstSFI CTRYAG 1 cut(s) 935
BstSLI GKGCMC 1 cut(s) 1032
BstUI CGCG 1 cut(s) 1730
BstV1I GCAGC 7 cut(s) 108, 595, 1565, 1885, 1904, 1907, 1952
BstV2I GAAGAC 1 cut(s) 204
BstX2I RGATCY 7 cut(s) 439, 466, 773, 817, 875, 1527, 1830
BstYI RGATCY 7 cut(s) 439, 466, 773, 817, 875, 1527, 1830
BsuI GTATCC 1 cut(s) 1725
BsuRI GGCC 3 cut(s) 497, 912, 1108
BtgZI GCGATG 1 cut(s) 852
BtrI CACGTC 1 cut(s) 1937
BtsCI GGATG 4 cut(s) 232, 268, 331, 1048
BtsI GCAGTG 1 cut(s) 441
BtsIMutI CAGTG 6 cut(s) 441, 1180, 1516, 1707, 1716, 2026
BveI ACCTGC 1 cut(s) 658
Cac8I GCNNGC 4 cut(s) 787, 1484, 1677, 2011
CaiI CAGNNNCTG 3 cut(s) 387, 698, 1898
CciI TCATGA 1 cut(s) 1269
Cfr10I RCCGGY 2 cut(s) 1463, 1675
Cfr13I GGNCC 3 cut(s) 495, 1019, 1106
CseI GACGC 2 cut(s) 1592, 1928
Csp6I GTAC 3 cut(s) 24, 647, 682
CspAI ACCGGT 1 cut(s) 1463
CviQI GTAC 3 cut(s) 24, 647, 682
DdeI CTNAG 8 cut(s) 221, 527, 1275, 1386, 1531, 1699, 1816, 1902
DpnI GATC 9 cut(s) 441, 468, 775, 819, 877, 1090, 1317, 1529, 1832
DpnII GATC 9 cut(s) 439, 466, 773, 817, 875, 1088, 1315, 1527, 1830
DriI GACNNNNNGTC 1 cut(s) 1443
Eam1104I CTCTTC 2 cut(s) 33, 1964
Eam1105I GACNNNNNGTC 1 cut(s) 1443
EarI CTCTTC 2 cut(s) 33, 1964
Ecl136II GAGCTC 1 cut(s) 1636
Eco24I GRGCYC 1 cut(s) 1638
Eco47I GGWCC 1 cut(s) 1019
Eco53kI GAGCTC 1 cut(s) 1636
Eco57I CTGAAG 1 cut(s) 216
Eco91I GGTNACC 1 cut(s) 187
EcoICRI GAGCTC 1 cut(s) 1636
EcoO65I GGTNACC 1 cut(s) 187
EcoRII CCWGG 2 cut(s) 443, 687
EcoT38I GRGCYC 1 cut(s) 1638
FalI AAGNNNNNCTT 2 cut(s) 989, 1021
FaqI GGGAC 3 cut(s) 187, 974, 1586
FauI CCCGC 1 cut(s) 1078
FokI GGATG 4 cut(s) 239, 275, 338, 1055
FriOI GRGCYC 1 cut(s) 1638
FspBI CTAG 2 cut(s) 821, 1694
HaeIII GGCC 3 cut(s) 497, 912, 1108
HapII CCGG 3 cut(s) 771, 1464, 1676
HgaI GACGC 2 cut(s) 1592, 1928
HincII GTYRAC 2 cut(s) 405, 1437
HindII GTYRAC 2 cut(s) 405, 1437
HindIII AAGCTT 2 cut(s) 256, 319
HinfI GANTC 8 cut(s) 166, 217, 756, 1235, 1277, 1610, 1751, 1995
HpaII CCGG 3 cut(s) 771, 1464, 1676
HphI GGTGA 2 cut(s) 181, 633
Hpy166II GTNNAC 5 cut(s) 405, 1414, 1437, 1519, 1707
Hpy188I TCNGA 8 cut(s) 37, 196, 355, 630, 952, 1168, 1378, 1644
Hpy188III TCNNGA 7 cut(s) 163, 821, 1270, 1607, 1771, 1904, 1992
Hpy8I GTNNAC 5 cut(s) 405, 1414, 1437, 1519, 1707
HpyAV CCTTC 6 cut(s) 280, 525, 839, 959, 991, 1639
HpyCH4III ACNGT 6 cut(s) 1175, 1286, 1418, 1511, 1711, 1809
HpyCH4IV ACGT 4 cut(s) 86, 240, 739, 1936
HpyF10VI GCNNNNNNNGC 5 cut(s) 59, 1114, 1685, 1694, 1898
HpyF3I CTNAG 8 cut(s) 221, 527, 1275, 1386, 1531, 1699, 1816, 1902
HpySE526I ACGT 4 cut(s) 86, 240, 739, 1936
KroI GCCGGC 1 cut(s) 1675
KroNI GCCGGC 1 cut(s) 1677
Kzo9I GATC 9 cut(s) 439, 466, 773, 817, 875, 1088, 1315, 1527, 1830
LmnI GCTCC 2 cut(s) 834, 1633
Lsp1109I GCAGC 7 cut(s) 108, 595, 1565, 1885, 1904, 1907, 1952
LweI GCATC 5 cut(s) 49, 253, 421, 560, 772
MaeI CTAG 2 cut(s) 821, 1694
MaeII ACGT 4 cut(s) 86, 240, 739, 1936
MaeIII GTNAC 3 cut(s) 187, 974, 1852
MalI GATC 9 cut(s) 441, 468, 775, 819, 877, 1090, 1317, 1529, 1832
MboI GATC 9 cut(s) 439, 466, 773, 817, 875, 1088, 1315, 1527, 1830
MboII GAAGA 6 cut(s) 50, 209, 349, 827, 1073, 1951
MfeI CAATTG 4 cut(s) 54, 807, 1023, 1914
MflI RGATCY 7 cut(s) 439, 466, 773, 817, 875, 1527, 1830
MhlI GDGCHC 2 cut(s) 1032, 1638
MlyI GAGTC 3 cut(s) 226, 1286, 1619
MmeI TCCRAC 2 cut(s) 635, 653
MroNI GCCGGC 1 cut(s) 1675
MroXI GAANNNNTTC 1 cut(s) 1958
MseI TTAA 3 cut(s) 182, 1766, 2004
MslI CAYNNNNRTG 1 cut(s) 1509
MspA1I CMGCKG 4 cut(s) 586, 1353, 1578, 1898
MspI CCGG 3 cut(s) 771, 1464, 1676
MspR9I CCNGG 2 cut(s) 445, 689
MunI CAATTG 4 cut(s) 54, 807, 1023, 1914
Mva1269I GAATGC 1 cut(s) 1873
MvaI CCWGG 2 cut(s) 445, 689
MvnI CGCG 1 cut(s) 1730
MwoI GCNNNNNNNGC 5 cut(s) 59, 1114, 1685, 1694, 1898
NaeI GCCGGC 1 cut(s) 1677
NdeII GATC 9 cut(s) 439, 466, 773, 817, 875, 1088, 1315, 1527, 1830
NgoMIV GCCGGC 1 cut(s) 1675
NlaIV GGNNCC 5 cut(s) 441, 468, 1020, 1832, 1955
NmuCI GTSAC 2 cut(s) 187, 1852
NspI RCATGY 3 cut(s) 394, 945, 1780
NspV TTCGAA 1 cut(s) 1803
PagI TCATGA 1 cut(s) 1269
PciI ACATGT 1 cut(s) 941
PctI GAATGC 1 cut(s) 1873
PdiI GCCGGC 1 cut(s) 1677
PdmI GAANNNNTTC 1 cut(s) 1958
PfeI GAWTC 5 cut(s) 166, 756, 1235, 1751, 1995
PflFI GACNNNGTC 4 cut(s) 905, 1276, 1602, 1850
PflMI CCANNNNNTGG 1 cut(s) 492
PinAI ACCGGT 1 cut(s) 1463
PleI GAGTC 3 cut(s) 225, 1285, 1618
PpsI GAGTC 3 cut(s) 225, 1285, 1618
PscI ACATGT 1 cut(s) 941
PshAI GACNNNNGTC 1 cut(s) 204
PsiI TTATAA 1 cut(s) 377
Psp124BI GAGCTC 1 cut(s) 1638
Psp1406I AACGTT 1 cut(s) 739
Psp6I CCWGG 2 cut(s) 443, 687
PspEI GGTNACC 1 cut(s) 187
PspGI CCWGG 2 cut(s) 443, 687
PspN4I GGNNCC 5 cut(s) 441, 468, 1020, 1832, 1955
PspPI GGNCC 3 cut(s) 495, 1019, 1106
PstNI CAGNNNCTG 3 cut(s) 387, 698, 1898
PsuI RGATCY 7 cut(s) 439, 466, 773, 817, 875, 1527, 1830
PsyI GACNNNGTC 4 cut(s) 905, 1276, 1602, 1850
PvuII CAGCTG 4 cut(s) 586, 1353, 1578, 1898
RsaI GTAC 3 cut(s) 25, 648, 683
RsaNI GTAC 3 cut(s) 24, 647, 682
RseI CAYNNNNRTG 1 cut(s) 1509
SacI GAGCTC 1 cut(s) 1638
SaqAI TTAA 3 cut(s) 182, 1766, 2004
Sau3AI GATC 9 cut(s) 439, 466, 773, 817, 875, 1088, 1315, 1527, 1830
Sau96I GGNCC 3 cut(s) 495, 1019, 1106
ScaI AGTACT 1 cut(s) 648
SchI GAGTC 3 cut(s) 226, 1286, 1619
ScrFI CCNGG 2 cut(s) 445, 689
SduI GDGCHC 2 cut(s) 1032, 1638
SfaNI GCATC 5 cut(s) 49, 253, 421, 560, 772
SfcI CTRYAG 1 cut(s) 935
SfuI TTCGAA 1 cut(s) 1803
SinI GGWCC 1 cut(s) 1019
SmiMI CAYNNNNRTG 1 cut(s) 1509
SsiI CCGC 5 cut(s) 548, 916, 1085, 1728, 2014
SspMI CTAG 2 cut(s) 821, 1694
SstI GAGCTC 1 cut(s) 1638
StyD4I CCNGG 2 cut(s) 443, 687
TaaI ACNGT 6 cut(s) 1175, 1286, 1418, 1511, 1711, 1809
TaiI ACGT 4 cut(s) 89, 243, 742, 1939
TaqI TCGA 2 cut(s) 1548, 1803
TatI WGTACW 2 cut(s) 23, 646
TauI GCSGC 3 cut(s) 551, 1730, 2016
TfiI GAWTC 5 cut(s) 166, 756, 1235, 1751, 1995
Tru1I TTAA 3 cut(s) 182, 1766, 2004
Tru9I TTAA 3 cut(s) 182, 1766, 2004
TscAI CASTG 5 cut(s) 441, 1180, 1516, 1707, 1716
TseFI GTSAC 2 cut(s) 187, 1852
TseI GCWGC 7 cut(s) 96, 583, 1578, 1892, 1895, 1898, 1940
Tsp45I GTSAC 2 cut(s) 187, 1852
TspDTI ATGAA 6 cut(s) 17, 1010, 1059, 1200, 1348, 1880
TspGWI ACGGA 4 cut(s) 194, 1067, 1823, 1865
TspRI CASTG 5 cut(s) 441, 1180, 1516, 1707, 1716
Tth111I GACNNNGTC 4 cut(s) 905, 1276, 1602, 1850
Van91I CCANNNNNTGG 1 cut(s) 492
VpaK11BI GGWCC 1 cut(s) 1019
XapI RAATTY 6 cut(s) 8, 137, 293, 860, 1201, 2000
XbaI TCTAGA 1 cut(s) 820
XceI RCATGY 3 cut(s) 394, 945, 1780
XcmI CCANNNNNNNNNTGG 1 cut(s) 651
XmnI GAANNNNTTC 1 cut(s) 1958
XspI CTAG 2 cut(s) 821, 1694
ZrmI AGTACT 1 cut(s) 648
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.