FvH4_2g27901

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000030
Physical Location & Seq
Forward (+)
22034868 .. 22037517
2650 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g27901.t1

Sequence Viewer

Length: 1416 bp
ATGGATGAATGCAAAAATGAGAATGTTGTTAGCGGGACCAGTGAGATGTTGGATTTTTGTATCGAGGAGAACAACTTTGAGAACATAGATTCTGACGAGACGGACGAGAGCAGCCTAGACTTGGAGGATTGCGGTGTGGATACAATTGGTGGCGTAGATGTTGATTTATGCGTTAAAATGAACGGGAATTGTCCGGTGACCCCGATAATAGGCCGTCGGATGAGGGATTTTAGAAGAACATGCATAGGTTTTTCGGAAGAAAAACAAAGCGTACTTATGAATTCAGGGTTTGGTTGTCTATTCACGTTTAGGTGCAGTGAACTGAACATCCCTTTGTGCTACTACATGTGCAAGAACTTTGATGTCGAGAAGTCGTTGATAAAGATTCATGGTAGACATCTTGCAGTTAATGTTTTGGACTTGAAACATGTTTTGGGATTGAGTGATGGAGGAAGCGACGTGGAGTTCTGTTCAAGCTGTGACGACACGCTTATGCTGGACTGGAAGGCAAGACTGTGGGGTGGTGAAGAGAATATGACTTTGGATGTTCTTGCGAAAAAGGTGGTTACTTCCAAAACGGCGGATGACGCATTCCTAGTAAGTTTCTGCCTGTATGCCTTGTCCACTATGATTATGCCATGTGAATCCGATATTGTGGATCCGAGGCTGTTGGCACCCCTGAACGACCCAAAGAAAATAAGTACATACAACTGGGCGTCCTTTGCATTTAGACATCTTGTCGATGGCATTCGGAGGTACCAAACATGTGTTTCTTCACCAGTGTACAGCTGTGTTGCATTTCTACAGTTGTTCTATCTGGATACACTTATAATGAAGGCCATTTACGTAAACAGAATTGCGCACCCGGTAATGTGTTGGACCAATAAGTCTGCAAGAATAATGTTCGGCCAGACAGAGAGGGCAGGTGGATTTGAGGATGGATCGACTTATGTTTCAAAAAAGTGGTCGGGGTGCTCTCAATATAAACCTGGGGGATCGGAAGACTGTAGCACCGGATTGAAAACTACTGTAGTAGAAGATCTTGCGCGAGTTACGAAGGTTGTTGAAGAACTGAAAGTGCAAATAAACCAAGTTAGATCTACGTTTTCTGAAATGCACCCGGACATGATTGTTCTTCGTGAAGCTATTATCACACTACAACAATTGGTGCAACAACTGACGGATGAAGGGATTGATAACATAGTTTGTGAGGTGGTTAAGGAAGTAATTGAAGAGGAGGCCGAATACAAGGATATGGTGACGGCCGAGGGTACCAATTCAGTTTGCACTTCATCGCCAACAGCTGCGTATAATGATGGCCTGGACACAGTAAGTCTGGTGGAATATTTAATATTCCCTGGTCAAGTAATCGTAGTACCCCACCTTAAAATTAAACTGGAGTATTGTTTAAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

472

Amino Acids

52.7

Weight (kDa)

4.69

Isoelectric Point (pI)

39.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 830
AarI CACCTGC 1 cut(s) 914
AasI GACNNNNNNGTC 1 cut(s) 886
Acc16I TGCGCA 1 cut(s) 861
Acc36I ACCTGC 1 cut(s) 914
Acc65I GGTACC 2 cut(s) 756, 1271
AccB1I GGYRCC 3 cut(s) 673, 756, 1271
AccI GTMKAC 1 cut(s) 394
AccII CGCG 1 cut(s) 1048
AciI CCGC 3 cut(s) 33, 132, 581
AclWI GGATC 4 cut(s) 653, 666, 949, 1003
AcoI YGGCCR 2 cut(s) 907, 1263
AcsI RAATTY 1 cut(s) 280
AcyI GRCGYC 1 cut(s) 716
AfaI GTAC 6 cut(s) 273, 703, 758, 785, 1273, 1377
AfiI CCNNNNNNNGG 2 cut(s) 121, 209
AflIII ACRYGT 3 cut(s) 345, 427, 764
AgsI TTSAA 6 cut(s) 424, 474, 957, 1021, 1067, 1232
AhdI GACNNNNNGTC 1 cut(s) 737
AjiI CACGTC 1 cut(s) 460
AjnI CCWGG 3 cut(s) 988, 1320, 1357
AjuI GAANNNNNNNTTGG 4 cut(s) 416, 448, 524, 556
AloI GAACNNNNNNTCC 2 cut(s) 312, 344
AluBI AGCT 4 cut(s) 477, 789, 1145, 1304
AluI AGCT 4 cut(s) 477, 789, 1145, 1304
Alw21I GWGCWC 1 cut(s) 977
Alw26I GTCTC 1 cut(s) 92
AlwI GGATC 4 cut(s) 653, 666, 949, 1003
AoxI GGCC 6 cut(s) 211, 837, 907, 1239, 1263, 1318
ApeKI GCWGC 2 cut(s) 111, 1304
ApoI RAATTY 1 cut(s) 280
ArsI GACNNNNNNTTYG 2 cut(s) 950, 982
Asp718I GGTACC 2 cut(s) 756, 1271
AspLEI GCGC 2 cut(s) 862, 1048
AspS9I GGNCC 2 cut(s) 36, 879
AsuC2I CCSGG 2 cut(s) 866, 1121
AsuHPI GGTGA 4 cut(s) 208, 536, 768, 1270
AvaII GGWCC 2 cut(s) 36, 879
BamHI GGATCC 1 cut(s) 658
BanI GGYRCC 3 cut(s) 673, 756, 1271
BarI GAAGNNNNNNTAC 2 cut(s) 827, 859
BbsI GAAGAC 1 cut(s) 1008
Bbv12I GWGCWC 1 cut(s) 977
BbvI GCAGC 2 cut(s) 123, 1291
BccI CCATC 4 cut(s) 440, 737, 932, 1310
BceAI ACGGC 3 cut(s) 198, 594, 1278
BciT130I CCWGG 3 cut(s) 990, 1322, 1359
BciVI GTATCC 2 cut(s) 133, 814
BcnI CCSGG 2 cut(s) 866, 1121
BcoDI GTCTC 1 cut(s) 92
BfaI CTAG 2 cut(s) 116, 596
BfmI CTRYAG 3 cut(s) 803, 1006, 1029
BfuAI ACCTGC 1 cut(s) 914
BfuI GTATCC 2 cut(s) 133, 814
BglII AGATCT 2 cut(s) 1039, 1097
BisI GCNGC 2 cut(s) 112, 1305
BlsI GCNGC 2 cut(s) 113, 1306
Bme1390I CCNGG 5 cut(s) 866, 990, 1121, 1322, 1359
Bme18I GGWCC 2 cut(s) 36, 879
BmeRI GACNNNNNGTC 1 cut(s) 737
BmgBI CACGTC 1 cut(s) 460
BmgT120I GGNCC 2 cut(s) 36, 879
BmiI GGNNCC 5 cut(s) 37, 660, 675, 758, 1273
BmrFI CCNGG 5 cut(s) 866, 990, 1121, 1322, 1359
BmrI ACTGGG 1 cut(s) 721
BmuI ACTGGG 1 cut(s) 721
BpiI GAAGAC 1 cut(s) 1008
BpuMI CCSGG 2 cut(s) 866, 1121
BsaAI YACGTR 1 cut(s) 847
BsaHI GRCGYC 1 cut(s) 716
BsaJI CCNNGG 4 cut(s) 662, 989, 1266, 1357
BsaWI WCCGGW 2 cut(s) 193, 1013
Bsc4I CCNNNNNNNGG 2 cut(s) 121, 209
Bse1I ACTGG 5 cut(s) 39, 506, 716, 779, 1401
BseBI CCWGG 3 cut(s) 990, 1322, 1359
BseDI CCNNGG 4 cut(s) 662, 989, 1266, 1357
BseGI GGATG 7 cut(s) 10, 225, 327, 550, 589, 943, 1189
BseLI CCNNNNNNNGG 2 cut(s) 121, 209
BseNI ACTGG 5 cut(s) 39, 506, 716, 779, 1401
BseRI GAGGAG 2 cut(s) 80, 1250
BseX3I CGGCCG 1 cut(s) 1263
BseXI GCAGC 2 cut(s) 123, 1291
BsgI GTGCAG 1 cut(s) 334
Bsh1236I CGCG 1 cut(s) 1048
Bsh1285I CGRYCG 1 cut(s) 1266
BshFI GGCC 6 cut(s) 213, 839, 909, 1241, 1265, 1320
BshNI GGYRCC 3 cut(s) 673, 756, 1271
BsiEI CGRYCG 1 cut(s) 1266
BsiHKAI GWGCWC 1 cut(s) 977
BsiSI CCGG 4 cut(s) 194, 866, 1014, 1121
BslFI GGGAC 1 cut(s) 49
BslI CCNNNNNNNGG 2 cut(s) 121, 209
BsmAI GTCTC 1 cut(s) 92
BsmBI CGTCTC 1 cut(s) 92
BsmFI GGGAC 1 cut(s) 49
BsmI GAATGC 3 cut(s) 14, 590, 747
BsnI GGCC 6 cut(s) 213, 839, 909, 1241, 1265, 1320
Bsp1286I GDGCHC 1 cut(s) 977
Bsp1407I TGTACA 1 cut(s) 783
Bsp143I GATC 5 cut(s) 658, 941, 995, 1039, 1097
BspACI CCGC 3 cut(s) 33, 132, 581
BspANI GGCC 6 cut(s) 213, 839, 909, 1241, 1265, 1320
BspFNI CGCG 1 cut(s) 1048
BspLI GGNNCC 5 cut(s) 37, 660, 675, 758, 1273
BspMI ACCTGC 1 cut(s) 914
BspPI GGATC 4 cut(s) 653, 666, 949, 1003
BspT107I GGYRCC 3 cut(s) 673, 756, 1271
BsrGI TGTACA 1 cut(s) 783
BsrI ACTGG 5 cut(s) 39, 506, 716, 779, 1401
BssECI CCNNGG 4 cut(s) 662, 989, 1266, 1357
BssMI GATC 5 cut(s) 658, 941, 995, 1039, 1097
BssNI GRCGYC 1 cut(s) 716
Bst2UI CCWGG 3 cut(s) 990, 1322, 1359
Bst4CI ACNGT 5 cut(s) 516, 807, 1007, 1030, 1330
Bst6I CTCTTC 2 cut(s) 522, 1227
BstACI GRCGYC 1 cut(s) 716
BstAUI TGTACA 1 cut(s) 783
BstBAI YACGTR 1 cut(s) 847
BstEII GGTNACC 1 cut(s) 196
BstF5I GGATG 7 cut(s) 10, 225, 327, 550, 589, 943, 1189
BstFNI CGCG 1 cut(s) 1048
BstHHI GCGC 2 cut(s) 862, 1048
BstKTI GATC 5 cut(s) 661, 944, 998, 1042, 1100
BstMAI GTCTC 1 cut(s) 92
BstMBI GATC 5 cut(s) 658, 941, 995, 1039, 1097
BstMCI CGRYCG 1 cut(s) 1266
BstMWI GCNNNNNNNGC 2 cut(s) 587, 722
BstNI CCWGG 3 cut(s) 990, 1322, 1359
BstNSI RCATGY 4 cut(s) 243, 349, 431, 768
BstPI GGTNACC 1 cut(s) 196
BstSCI CCNGG 5 cut(s) 864, 988, 1119, 1320, 1357
BstSFI CTRYAG 3 cut(s) 803, 1006, 1029
BstSNI TACGTA 1 cut(s) 847
BstUI CGCG 1 cut(s) 1048
BstV1I GCAGC 2 cut(s) 123, 1291
BstV2I GAAGAC 1 cut(s) 1008
BstX2I RGATCY 3 cut(s) 658, 1039, 1097
BstYI RGATCY 3 cut(s) 658, 1039, 1097
BstZI CGGCCG 1 cut(s) 1263
BsuI GTATCC 2 cut(s) 133, 814
BsuRI GGCC 6 cut(s) 213, 839, 909, 1241, 1265, 1320
BtgZI GCGATG 1 cut(s) 1278
BtrI CACGTC 1 cut(s) 460
BtsCI GGATG 7 cut(s) 10, 225, 327, 550, 589, 943, 1189
BtsI GCAGTG 1 cut(s) 322
BtsIMutI CAGTG 3 cut(s) 46, 322, 786
BveI ACCTGC 1 cut(s) 914
CfoI GCGC 2 cut(s) 862, 1048
Cfr13I GGNCC 2 cut(s) 36, 879
CseI GACGC 2 cut(s) 596, 705
Csp6I GTAC 6 cut(s) 272, 702, 757, 784, 1272, 1376
CviAII CATG 7 cut(s) 240, 346, 389, 428, 639, 765, 1126
CviQI GTAC 6 cut(s) 272, 702, 757, 784, 1272, 1376
DpnI GATC 5 cut(s) 660, 943, 997, 1041, 1099
DpnII GATC 5 cut(s) 658, 941, 995, 1039, 1097
DraI TTTAAA 1 cut(s) 1410
DrdI GACNNNNNNGTC 1 cut(s) 886
DriI GACNNNNNGTC 1 cut(s) 737
DseDI GACNNNNNNGTC 1 cut(s) 886
EaeI YGGCCR 2 cut(s) 907, 1263
EagI CGGCCG 1 cut(s) 1263
Eam1104I CTCTTC 2 cut(s) 522, 1227
Eam1105I GACNNNNNGTC 1 cut(s) 737
EarI CTCTTC 2 cut(s) 522, 1227
EciI GGCGGA 1 cut(s) 596
EclXI CGGCCG 1 cut(s) 1263
Eco105I TACGTA 1 cut(s) 847
Eco47I GGWCC 2 cut(s) 36, 879
Eco52I CGGCCG 1 cut(s) 1263
Eco91I GGTNACC 1 cut(s) 196
EcoO65I GGTNACC 1 cut(s) 196
EcoRI GAATTC 1 cut(s) 280
EcoRII CCWGG 3 cut(s) 988, 1320, 1357
EcoT22I ATGCAT 1 cut(s) 245
Esp3I CGTCTC 1 cut(s) 92
FaeI CATG 7 cut(s) 243, 349, 392, 431, 642, 768, 1129
FaqI GGGAC 1 cut(s) 49
FatI CATG 7 cut(s) 239, 345, 388, 427, 638, 764, 1125
FauI CCCGC 1 cut(s) 26
FblI GTMKAC 1 cut(s) 394
Fnu4HI GCNGC 2 cut(s) 112, 1305
FokI GGATG 7 cut(s) 17, 232, 314, 557, 596, 950, 1196
Fsp4HI GCNGC 2 cut(s) 112, 1305
FspBI CTAG 2 cut(s) 116, 596
FspI TGCGCA 1 cut(s) 861
GlaI GCGC 2 cut(s) 861, 1047
GluI GCNGC 2 cut(s) 112, 1305
HaeIII GGCC 6 cut(s) 213, 839, 909, 1241, 1265, 1320
HapII CCGG 4 cut(s) 194, 866, 1014, 1121
HgaI GACGC 2 cut(s) 596, 705
HhaI GCGC 2 cut(s) 862, 1048
Hin1I GRCGYC 1 cut(s) 716
Hin1II CATG 7 cut(s) 243, 349, 392, 431, 642, 768, 1129
Hin6I GCGC 2 cut(s) 860, 1046
HinP1I GCGC 2 cut(s) 860, 1046
HinfI GANTC 3 cut(s) 89, 385, 644
HpaII CCGG 4 cut(s) 194, 866, 1014, 1121
HphI GGTGA 4 cut(s) 208, 536, 768, 1270
Hpy166II GTNNAC 5 cut(s) 320, 395, 624, 784, 850
Hpy188I TCNGA 8 cut(s) 94, 219, 256, 649, 663, 753, 1000, 1111
Hpy188III TCNNGA 3 cut(s) 367, 818, 1139
Hpy8I GTNNAC 5 cut(s) 320, 395, 624, 784, 850
Hpy99I CGWCG 2 cut(s) 219, 461
HpyAV CCTTC 4 cut(s) 499, 829, 1051, 1181
HpyCH4III ACNGT 5 cut(s) 516, 807, 1007, 1030, 1330
HpyCH4IV ACGT 4 cut(s) 305, 459, 846, 1103
HpyF10VI GCNNNNNNNGC 2 cut(s) 587, 722
HpySE526I ACGT 4 cut(s) 305, 459, 846, 1103
Hsp92I GRCGYC 1 cut(s) 716
Hsp92II CATG 7 cut(s) 243, 349, 392, 431, 642, 768, 1129
HspAI GCGC 2 cut(s) 860, 1046
KpnI GGTACC 2 cut(s) 760, 1275
Kzo9I GATC 5 cut(s) 658, 941, 995, 1039, 1097
Lsp1109I GCAGC 2 cut(s) 123, 1291
MaeI CTAG 2 cut(s) 116, 596
MaeII ACGT 4 cut(s) 305, 459, 846, 1103
MaeIII GTNAC 5 cut(s) 196, 479, 565, 1051, 1258
MalI GATC 5 cut(s) 660, 943, 997, 1041, 1099
MboI GATC 5 cut(s) 658, 941, 995, 1039, 1097
MboII GAAGA 9 cut(s) 246, 269, 539, 765, 1013, 1049, 1079, 1127, 1244
MfeI CAATTG 2 cut(s) 144, 1163
MflI RGATCY 3 cut(s) 658, 1039, 1097
MhlI GDGCHC 1 cut(s) 977
MluCI AATT 8 cut(s) 144, 187, 280, 855, 1163, 1227, 1276, 1389
MmeI TCCRAC 3 cut(s) 30, 197, 857
Mph1103I ATGCAT 1 cut(s) 245
MseI TTAA 7 cut(s) 174, 408, 1218, 1349, 1386, 1392, 1409
MslI CAYNNNNRTG 1 cut(s) 491
MspA1I CMGCKG 2 cut(s) 789, 1304
MspI CCGG 4 cut(s) 194, 866, 1014, 1121
MspR9I CCNGG 5 cut(s) 866, 990, 1121, 1322, 1359
MunI CAATTG 2 cut(s) 144, 1163
Mva1269I GAATGC 3 cut(s) 14, 590, 747
MvaI CCWGG 3 cut(s) 990, 1322, 1359
MvnI CGCG 1 cut(s) 1048
MwoI GCNNNNNNNGC 2 cut(s) 587, 722
NciI CCSGG 2 cut(s) 866, 1121
NdeII GATC 5 cut(s) 658, 941, 995, 1039, 1097
NlaIII CATG 7 cut(s) 243, 349, 392, 431, 642, 768, 1129
NlaIV GGNNCC 5 cut(s) 37, 660, 675, 758, 1273
NmeAIII GCCGAG 1 cut(s) 1291
NmuCI GTSAC 3 cut(s) 196, 479, 1258
NsbI TGCGCA 1 cut(s) 861
NsiI ATGCAT 1 cut(s) 245
NspI RCATGY 4 cut(s) 243, 349, 431, 768
PaqCI CACCTGC 1 cut(s) 914
PciI ACATGT 3 cut(s) 345, 427, 764
PcsI WCGNNNNNNNCGW 1 cut(s) 102
PctI GAATGC 3 cut(s) 14, 590, 747
PfeI GAWTC 3 cut(s) 89, 385, 644
PkrI GCNGC 2 cut(s) 113, 1306
Ppu21I YACGTR 1 cut(s) 847
PscI ACATGT 3 cut(s) 345, 427, 764
PsiI TTATAA 1 cut(s) 830
Psp6I CCWGG 3 cut(s) 988, 1320, 1357
PspEI GGTNACC 1 cut(s) 196
PspGI CCWGG 3 cut(s) 988, 1320, 1357
PspN4I GGNNCC 5 cut(s) 37, 660, 675, 758, 1273
PspPI GGNCC 2 cut(s) 36, 879
PsuI RGATCY 3 cut(s) 658, 1039, 1097
PvuII CAGCTG 2 cut(s) 789, 1304
RsaI GTAC 6 cut(s) 273, 703, 758, 785, 1273, 1377
RsaNI GTAC 6 cut(s) 272, 702, 757, 784, 1272, 1376
RseI CAYNNNNRTG 1 cut(s) 491
SaqAI TTAA 7 cut(s) 174, 408, 1218, 1349, 1386, 1392, 1409
SatI GCNGC 2 cut(s) 112, 1305
Sau3AI GATC 5 cut(s) 658, 941, 995, 1039, 1097
Sau96I GGNCC 2 cut(s) 36, 879
ScrFI CCNGG 5 cut(s) 866, 990, 1121, 1322, 1359
SduI GDGCHC 1 cut(s) 977
SfcI CTRYAG 3 cut(s) 803, 1006, 1029
SinI GGWCC 2 cut(s) 36, 879
SmiMI CAYNNNNRTG 1 cut(s) 491
SnaBI TACGTA 1 cut(s) 847
Sse9I AATT 8 cut(s) 144, 187, 280, 855, 1163, 1227, 1276, 1389
SsiI CCGC 3 cut(s) 33, 132, 581
SspI AATATT 2 cut(s) 1346, 1353
SspMI CTAG 2 cut(s) 116, 596
StyD4I CCNGG 5 cut(s) 864, 988, 1119, 1320, 1357
TaaI ACNGT 5 cut(s) 516, 807, 1007, 1030, 1330
TaiI ACGT 4 cut(s) 308, 462, 849, 1106
TaqI TCGA 4 cut(s) 63, 366, 741, 944
TasI AATT 8 cut(s) 144, 187, 280, 855, 1163, 1227, 1276, 1389
TatI WGTACW 2 cut(s) 701, 783
TfiI GAWTC 3 cut(s) 89, 385, 644
Tru1I TTAA 7 cut(s) 174, 408, 1218, 1349, 1386, 1392, 1409
Tru9I TTAA 7 cut(s) 174, 408, 1218, 1349, 1386, 1392, 1409
TscAI CASTG 3 cut(s) 46, 322, 786
TseFI GTSAC 3 cut(s) 196, 479, 1258
TseI GCWGC 2 cut(s) 111, 1304
Tsp45I GTSAC 3 cut(s) 196, 479, 1258
TspDTI ATGAA 7 cut(s) 21, 194, 293, 377, 848, 1200, 1281
TspGWI ACGGA 2 cut(s) 116, 1196
TspRI CASTG 3 cut(s) 46, 322, 786
VpaK11BI GGWCC 2 cut(s) 36, 879
XapI RAATTY 1 cut(s) 280
XceI RCATGY 4 cut(s) 243, 349, 431, 768
XcmI CCANNNNNNNNNTGG 1 cut(s) 46
XmiI GTMKAC 1 cut(s) 394
XspI CTAG 2 cut(s) 116, 596
Zsp2I ATGCAT 1 cut(s) 245
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.