PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Peptidase_C48 | PF02902 | 160 - 301 | 6.7e-12 | Ulp1 protease family, C-terminal catalytic domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 413 |
| Acc65I | GGTACC | 1 cut(s) | 905 |
| AccB1I | GGYRCC | 1 cut(s) | 905 |
| AccI | GTMKAC | 1 cut(s) | 42 |
| AciI | CCGC | 1 cut(s) | 870 |
| AclWI | GGATC | 3 cut(s) | 276, 676, 765 |
| AcoI | YGGCCR | 1 cut(s) | 568 |
| AcsI | RAATTY | 1 cut(s) | 212 |
| AfaI | GTAC | 5 cut(s) | 199, 226, 431, 907, 926 |
| AflIII | ACRYGT | 2 cut(s) | 108, 507 |
| AgsI | TTSAA | 9 cut(s) | 28, 172, 235, 289, 344, 374, 530, 826, 941 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 508, 778 |
| AjiI | CACGTC | 2 cut(s) | 304, 355 |
| AjnI | CCWGG | 2 cut(s) | 378, 613 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 439, 471 |
| AluBI | AGCT | 3 cut(s) | 394, 839, 1025 |
| AluI | AGCT | 3 cut(s) | 394, 839, 1025 |
| Alw21I | GWGCWC | 1 cut(s) | 697 |
| Alw26I | GTCTC | 5 cut(s) | 99, 198, 495, 778, 987 |
| AlwI | GGATC | 3 cut(s) | 276, 676, 765 |
| AoxI | GGCC | 1 cut(s) | 568 |
| ApeKI | GCWGC | 5 cut(s) | 402, 585, 740, 895, 917 |
| ApoI | RAATTY | 1 cut(s) | 212 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 197, 229 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 525 |
| Asp718I | GGTACC | 1 cut(s) | 905 |
| AspS9I | GGNCC | 2 cut(s) | 383, 842 |
| AsuC2I | CCSGG | 1 cut(s) | 721 |
| AsuHPI | GGTGA | 1 cut(s) | 967 |
| AvaII | GGWCC | 2 cut(s) | 383, 842 |
| BanI | GGYRCC | 1 cut(s) | 905 |
| BauI | CACGAG | 2 cut(s) | 201, 608 |
| BbsI | GAAGAC | 4 cut(s) | 12, 129, 192, 306 |
| Bbv12I | GWGCWC | 1 cut(s) | 697 |
| BbvI | GCAGC | 5 cut(s) | 414, 597, 752, 904, 907 |
| BccI | CCATC | 1 cut(s) | 827 |
| BceAI | ACGGC | 1 cut(s) | 229 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 899, 933 |
| BciT130I | CCWGG | 2 cut(s) | 380, 615 |
| BcnI | CCSGG | 1 cut(s) | 721 |
| BcoDI | GTCTC | 5 cut(s) | 99, 198, 495, 778, 987 |
| BfmI | CTRYAG | 3 cut(s) | 327, 400, 675 |
| BisI | GCNGC | 5 cut(s) | 403, 586, 741, 896, 918 |
| BlpI | GCTNAGC | 1 cut(s) | 1021 |
| BlsI | GCNGC | 5 cut(s) | 404, 587, 742, 897, 919 |
| Bme1390I | CCNGG | 3 cut(s) | 380, 615, 721 |
| Bme18I | GGWCC | 2 cut(s) | 383, 842 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 508, 778 |
| BmgBI | CACGTC | 2 cut(s) | 304, 355 |
| BmgT120I | GGNCC | 2 cut(s) | 383, 842 |
| BmiI | GGNNCC | 3 cut(s) | 384, 814, 907 |
| BmrFI | CCNGG | 3 cut(s) | 380, 615, 721 |
| BmsI | GCATC | 5 cut(s) | 622, 721, 982, 1007, 1038 |
| BpiI | GAAGAC | 4 cut(s) | 12, 129, 192, 306 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1021 |
| BpuEI | CTTGAG | 1 cut(s) | 501 |
| BpuMI | CCSGG | 1 cut(s) | 721 |
| BsaAI | YACGTR | 1 cut(s) | 924 |
| BsaBI | GATNNNNATC | 1 cut(s) | 596 |
| BsaJI | CCNNGG | 3 cut(s) | 274, 379, 386 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 443, 473 |
| Bse3DI | GCAATG | 1 cut(s) | 142 |
| Bse8I | GATNNNNATC | 1 cut(s) | 596 |
| BseBI | CCWGG | 2 cut(s) | 380, 615 |
| BseDI | CCNNGG | 3 cut(s) | 274, 379, 386 |
| BseGI | GGATG | 3 cut(s) | 73, 637, 973 |
| BseJI | GATNNNNATC | 1 cut(s) | 596 |
| BseMI | GCAATG | 1 cut(s) | 142 |
| BseMII | CTCAG | 1 cut(s) | 84 |
| BseXI | GCAGC | 5 cut(s) | 414, 597, 752, 904, 907 |
| BshFI | GGCC | 1 cut(s) | 570 |
| BshNI | GGYRCC | 1 cut(s) | 905 |
| BsiHKAI | GWGCWC | 1 cut(s) | 697 |
| BsiSI | CCGG | 1 cut(s) | 721 |
| BslFI | GGGAC | 1 cut(s) | 449 |
| BsmAI | GTCTC | 5 cut(s) | 99, 198, 495, 778, 987 |
| BsmBI | CGTCTC | 1 cut(s) | 198 |
| BsmFI | GGGAC | 1 cut(s) | 449 |
| BsmI | GAATGC | 1 cut(s) | 354 |
| BsnI | GGCC | 1 cut(s) | 570 |
| Bsp1286I | GDGCHC | 1 cut(s) | 697 |
| Bsp143I | GATC | 7 cut(s) | 139, 220, 268, 367, 681, 757, 957 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1021 |
| BspACI | CCGC | 1 cut(s) | 870 |
| BspANI | GGCC | 1 cut(s) | 570 |
| BspCNI | CTCAG | 1 cut(s) | 85 |
| BspLI | GGNNCC | 3 cut(s) | 384, 814, 907 |
| BspMAI | CTGCAG | 2 cut(s) | 404, 679 |
| BspPI | GGATC | 3 cut(s) | 276, 676, 765 |
| BspT107I | GGYRCC | 1 cut(s) | 905 |
| BsrDI | GCAATG | 1 cut(s) | 142 |
| BssECI | CCNNGG | 3 cut(s) | 274, 379, 386 |
| BssMI | GATC | 7 cut(s) | 139, 220, 268, 367, 681, 757, 957 |
| BssSI | CACGAG | 2 cut(s) | 201, 608 |
| BssT1I | CCWWGG | 1 cut(s) | 386 |
| Bst2BI | CACGAG | 2 cut(s) | 201, 608 |
| Bst2UI | CCWGG | 2 cut(s) | 380, 615 |
| Bst4CI | ACNGT | 4 cut(s) | 11, 128, 197, 1009 |
| Bst6I | CTCTTC | 1 cut(s) | 236 |
| BstBAI | YACGTR | 1 cut(s) | 924 |
| BstC8I | GCNNGC | 1 cut(s) | 1027 |
| BstDEI | CTNAG | 5 cut(s) | 53, 93, 545, 968, 1021 |
| BstDSI | CCRYGG | 1 cut(s) | 274 |
| BstF5I | GGATG | 3 cut(s) | 73, 637, 973 |
| BstKTI | GATC | 7 cut(s) | 142, 223, 271, 370, 684, 760, 960 |
| BstMAI | GTCTC | 5 cut(s) | 99, 198, 495, 778, 987 |
| BstMBI | GATC | 7 cut(s) | 139, 220, 268, 367, 681, 757, 957 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 740, 768, 836, 1026 |
| BstNI | CCWGG | 2 cut(s) | 380, 615 |
| BstNSI | RCATGY | 6 cut(s) | 112, 511, 662, 754, 791, 1004 |
| BstSCI | CCNGG | 3 cut(s) | 378, 613, 719 |
| BstSFI | CTRYAG | 3 cut(s) | 327, 400, 675 |
| BstSNI | TACGTA | 1 cut(s) | 924 |
| BstV1I | GCAGC | 5 cut(s) | 414, 597, 752, 904, 907 |
| BstV2I | GAAGAC | 4 cut(s) | 12, 129, 192, 306 |
| BstX2I | RGATCY | 2 cut(s) | 268, 681 |
| BstYI | RGATCY | 2 cut(s) | 268, 681 |
| BsuRI | GGCC | 1 cut(s) | 570 |
| BtgI | CCRYGG | 1 cut(s) | 274 |
| BtrI | CACGTC | 2 cut(s) | 304, 355 |
| BtsCI | GGATG | 3 cut(s) | 73, 637, 973 |
| BtsIMutI | CAGTG | 3 cut(s) | 16, 133, 1014 |
| Cac8I | GCNNGC | 1 cut(s) | 1027 |
| Cfr13I | GGNCC | 2 cut(s) | 383, 842 |
| CseI | GACGC | 1 cut(s) | 782 |
| Csp6I | GTAC | 5 cut(s) | 198, 225, 430, 906, 925 |
| CviAII | CATG | 6 cut(s) | 109, 508, 659, 751, 788, 1001 |
| CviQI | GTAC | 5 cut(s) | 198, 225, 430, 906, 925 |
| DdeI | CTNAG | 5 cut(s) | 53, 93, 545, 968, 1021 |
| DpnI | GATC | 7 cut(s) | 141, 222, 270, 369, 683, 759, 959 |
| DpnII | GATC | 7 cut(s) | 139, 220, 268, 367, 681, 757, 957 |
| DriI | GACNNNNNGTC | 2 cut(s) | 508, 778 |
| EaeI | YGGCCR | 1 cut(s) | 568 |
| Eam1104I | CTCTTC | 1 cut(s) | 236 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 508, 778 |
| EarI | CTCTTC | 1 cut(s) | 236 |
| Eco105I | TACGTA | 1 cut(s) | 924 |
| Eco130I | CCWWGG | 1 cut(s) | 386 |
| Eco47I | GGWCC | 2 cut(s) | 383, 842 |
| EcoRII | CCWGG | 2 cut(s) | 378, 613 |
| EcoT14I | CCWWGG | 1 cut(s) | 386 |
| ErhI | CCWWGG | 1 cut(s) | 386 |
| Esp3I | CGTCTC | 1 cut(s) | 198 |
| FaeI | CATG | 6 cut(s) | 112, 511, 662, 754, 791, 1004 |
| FaqI | GGGAC | 1 cut(s) | 449 |
| FatI | CATG | 6 cut(s) | 108, 507, 658, 750, 787, 1000 |
| FauNDI | CATATG | 2 cut(s) | 75, 180 |
| FblI | GTMKAC | 1 cut(s) | 42 |
| Fnu4HI | GCNGC | 5 cut(s) | 403, 586, 741, 896, 918 |
| FokI | GGATG | 3 cut(s) | 80, 644, 960 |
| Fsp4HI | GCNGC | 5 cut(s) | 403, 586, 741, 896, 918 |
| GluI | GCNGC | 5 cut(s) | 403, 586, 741, 896, 918 |
| HaeIII | GGCC | 1 cut(s) | 570 |
| HapII | CCGG | 1 cut(s) | 721 |
| HgaI | GACGC | 1 cut(s) | 782 |
| Hin1II | CATG | 6 cut(s) | 112, 511, 662, 754, 791, 1004 |
| HincII | GTYRAC | 2 cut(s) | 43, 513 |
| HindII | GTYRAC | 2 cut(s) | 43, 513 |
| HinfI | GANTC | 3 cut(s) | 312, 526, 561 |
| HpaII | CCGG | 1 cut(s) | 721 |
| HphI | GGTGA | 1 cut(s) | 967 |
| Hpy166II | GTNNAC | 7 cut(s) | 43, 134, 200, 227, 307, 513, 1012 |
| Hpy188I | TCNGA | 4 cut(s) | 665, 812, 934, 978 |
| Hpy188III | TCNNGA | 4 cut(s) | 289, 478, 518, 783 |
| Hpy8I | GTNNAC | 7 cut(s) | 43, 134, 200, 227, 307, 513, 1012 |
| Hpy99I | CGWCG | 1 cut(s) | 776 |
| HpyAV | CCTTC | 6 cut(s) | 338, 622, 714, 817, 827, 832 |
| HpyCH4III | ACNGT | 4 cut(s) | 11, 128, 197, 1009 |
| HpyCH4IV | ACGT | 4 cut(s) | 303, 354, 923, 943 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 740, 768, 836, 1026 |
| HpyF3I | CTNAG | 5 cut(s) | 53, 93, 545, 968, 1021 |
| HpySE526I | ACGT | 4 cut(s) | 303, 354, 923, 943 |
| Hsp92II | CATG | 6 cut(s) | 112, 511, 662, 754, 791, 1004 |
| KpnI | GGTACC | 1 cut(s) | 909 |
| Kzo9I | GATC | 7 cut(s) | 139, 220, 268, 367, 681, 757, 957 |
| LmnI | GCTCC | 4 cut(s) | 391, 655, 700, 836 |
| LpnPI | CCDG | 9 cut(s) | 365, 392, 574, 600, 627, 734, 740, 825, 1020 |
| Lsp1109I | GCAGC | 5 cut(s) | 414, 597, 752, 904, 907 |
| LweI | GCATC | 5 cut(s) | 622, 721, 982, 1007, 1038 |
| MaeII | ACGT | 4 cut(s) | 303, 354, 923, 943 |
| MaeIII | GTNAC | 3 cut(s) | 32, 355, 1003 |
| MalI | GATC | 7 cut(s) | 141, 222, 270, 369, 683, 759, 959 |
| MboI | GATC | 7 cut(s) | 139, 220, 268, 367, 681, 757, 957 |
| MflI | RGATCY | 2 cut(s) | 268, 681 |
| MhlI | GDGCHC | 1 cut(s) | 697 |
| MluCI | AATT | 4 cut(s) | 20, 86, 212, 928 |
| MmeI | TCCRAC | 1 cut(s) | 726 |
| MnlI | CCTC | 5 cut(s) | 31, 259, 445, 855, 979 |
| MroXI | GAANNNNTTC | 1 cut(s) | 525 |
| MseI | TTAA | 1 cut(s) | 435 |
| MspI | CCGG | 1 cut(s) | 721 |
| MspR9I | CCNGG | 3 cut(s) | 380, 615, 721 |
| Mva1269I | GAATGC | 1 cut(s) | 354 |
| MvaI | CCWGG | 2 cut(s) | 380, 615 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 740, 768, 836, 1026 |
| NciI | CCSGG | 1 cut(s) | 721 |
| NdeI | CATATG | 2 cut(s) | 75, 180 |
| NdeII | GATC | 7 cut(s) | 139, 220, 268, 367, 681, 757, 957 |
| NlaIII | CATG | 6 cut(s) | 112, 511, 662, 754, 791, 1004 |
| NlaIV | GGNNCC | 3 cut(s) | 384, 814, 907 |
| NmuCI | GTSAC | 2 cut(s) | 355, 1003 |
| NspI | RCATGY | 6 cut(s) | 112, 511, 662, 754, 791, 1004 |
| PciI | ACATGT | 2 cut(s) | 108, 507 |
| PctI | GAATGC | 1 cut(s) | 354 |
| PdmI | GAANNNNTTC | 1 cut(s) | 525 |
| PfeI | GAWTC | 3 cut(s) | 312, 526, 561 |
| PkrI | GCNGC | 5 cut(s) | 404, 587, 742, 897, 919 |
| Ppu21I | YACGTR | 1 cut(s) | 924 |
| PscI | ACATGT | 2 cut(s) | 108, 507 |
| PsiI | TTATAA | 1 cut(s) | 413 |
| Psp6I | CCWGG | 2 cut(s) | 378, 613 |
| PspGI | CCWGG | 2 cut(s) | 378, 613 |
| PspN4I | GGNNCC | 3 cut(s) | 384, 814, 907 |
| PspPI | GGNCC | 2 cut(s) | 383, 842 |
| PstI | CTGCAG | 2 cut(s) | 404, 679 |
| PsuI | RGATCY | 2 cut(s) | 268, 681 |
| RsaI | GTAC | 5 cut(s) | 199, 226, 431, 907, 926 |
| RsaNI | GTAC | 5 cut(s) | 198, 225, 430, 906, 925 |
| SalI | GTCGAC | 1 cut(s) | 41 |
| SaqAI | TTAA | 1 cut(s) | 435 |
| SatI | GCNGC | 5 cut(s) | 403, 586, 741, 896, 918 |
| Sau3AI | GATC | 7 cut(s) | 139, 220, 268, 367, 681, 757, 957 |
| Sau96I | GGNCC | 2 cut(s) | 383, 842 |
| ScrFI | CCNGG | 3 cut(s) | 380, 615, 721 |
| SduI | GDGCHC | 1 cut(s) | 697 |
| SfaNI | GCATC | 5 cut(s) | 622, 721, 982, 1007, 1038 |
| SfcI | CTRYAG | 3 cut(s) | 327, 400, 675 |
| SinI | GGWCC | 2 cut(s) | 383, 842 |
| SmlI | CTYRAG | 1 cut(s) | 516 |
| SmoI | CTYRAG | 1 cut(s) | 516 |
| SnaBI | TACGTA | 1 cut(s) | 924 |
| Sse9I | AATT | 4 cut(s) | 20, 86, 212, 928 |
| SsiI | CCGC | 1 cut(s) | 870 |
| StyD4I | CCNGG | 3 cut(s) | 378, 613, 719 |
| StyI | CCWWGG | 1 cut(s) | 386 |
| TaaI | ACNGT | 4 cut(s) | 11, 128, 197, 1009 |
| TaiI | ACGT | 4 cut(s) | 306, 357, 926, 946 |
| TaqI | TCGA | 4 cut(s) | 42, 782, 847, 960 |
| TasI | AATT | 4 cut(s) | 20, 86, 212, 928 |
| TfiI | GAWTC | 3 cut(s) | 312, 526, 561 |
| Tru1I | TTAA | 1 cut(s) | 435 |
| Tru9I | TTAA | 1 cut(s) | 435 |
| TscAI | CASTG | 3 cut(s) | 16, 133, 1014 |
| TseFI | GTSAC | 2 cut(s) | 355, 1003 |
| TseI | GCWGC | 5 cut(s) | 402, 585, 740, 895, 917 |
| Tsp45I | GTSAC | 2 cut(s) | 355, 1003 |
| TspDTI | ATGAA | 2 cut(s) | 99, 553 |
| TspGWI | ACGGA | 2 cut(s) | 145, 263 |
| TspRI | CASTG | 3 cut(s) | 16, 133, 1014 |
| VpaK11BI | GGWCC | 2 cut(s) | 383, 842 |
| XapI | RAATTY | 1 cut(s) | 212 |
| XceI | RCATGY | 6 cut(s) | 112, 511, 662, 754, 791, 1004 |
| XmiI | GTMKAC | 1 cut(s) | 42 |
| XmnI | GAANNNNTTC | 1 cut(s) | 525 |