Rmu_sc0007491.1_g000005

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007491.1
OG0000030
Physical Location & Seq
Reverse (-)
12796 .. 16990
4195 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007491.1_g000005.1.cds

Sequence Viewer

Length: 1467 bp
atgcgacgtgtcctccacgaccaccgcttagctgaaaggcgaagatttatgagtctagtatggcatcagagtgagatcttcaacgttactggagaactatgtcttccctgtataagtagaagatacttgcaacatatgaaatggggtttgggacactgtactaaattgaacctcccattgtgccaaatactggttgaaaattttgacgttgtgaactcatgcatcaagatacacgggaggaacttgatagtgactgaggaagactttaggagcattatgggagtcagaggtggagggtgtgatatggactttgaaggaagcaccgttgagcatgaaattttggcgctgaagagggagatagcagggaaggagagcgagataaccataggtggactgagtaagttgctcgttgaatctgaattcgttgatgacacatataaggttggctttgccttgtatgccctagcaactctgttatgcctactaacaagagcccacgtggatgaacgataccttatatcactgaaggatctaggtgcgctgtcttccaaaaactgggcaaagcttgcatttgcgaagttggttgaagggggcaggaagaaggtaaagagggttctggaagaagttgagagtgagggtggatttagatgcgagaatgtgtgtgtaacgaaaaagaacatctttgagacgacccatcaaatgtcgggatcagttgatgctagtacagggataagaactactgtagtggaggacttgtcagaagtgaggtctgatgtagacatgggccatttgaggagcacaattttgacgctagaaacatctcttagccaactgaaggcagagggtatcggccacattgtggcagaggtcattagaaaagtttttgaggacctccataaggagtacacgggtaatgaagagaagaatggttttgtcactggtcagaagcagcaccacacagaaactggtctacatcatggtgagatgtggcaaagtaaatctgacaatggtgtcctcaatgaggatgacacaattgctagccagagcaccgacttccagaatattgggcaagggttctttctagtggtgtctgagatttcgcatagcgattcgcacctactgacctatctcttcagcaagaaggtcaccggtgaagacagtgttgggtggcaatgcaaagtatgggatagcaaccccgatatgtcttcttacaaacgccggcaggattatgccattgcatgtatgtcactgcttgaaaagttcaactccggtgaccagagggtttgcttggcacttgagattgtgaatcacccgaggaatgatatggctaaacgagtgtggcaagtagctgccgaggaggtcccgaacgttgtacgagccaaagtagttatatcagcatcagtgaatgggagtggcgttcttgcagtggtaggcataaagttcaacccacgctgggataggcactga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

488

Amino Acids

54.86

Weight (kDa)

6.3

Isoelectric Point (pI)

45.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1010
AccB7I CCANNNNNTGG 3 cut(s) 190, 555, 859
AccI GTMKAC 2 cut(s) 777, 970
AciI CCGC 1 cut(s) 25
AclI AACGTT 2 cut(s) 84, 1368
AclWI GGATC 2 cut(s) 537, 715
AcoI YGGCCR 1 cut(s) 850
AcsI RAATTY 3 cut(s) 199, 336, 419
AcuI CTGAAG 4 cut(s) 368, 545, 854, 1117
AcvI CACGTG 1 cut(s) 499
AdeI CACNNNGTG 1 cut(s) 859
AfaI GTAC 4 cut(s) 160, 724, 905, 1374
AfiI CCNNNNNNNGG 7 cut(s) 190, 555, 835, 859, 898, 1021, 1453
AflIII ACRYGT 1 cut(s) 7
AgeI ACCGGT 1 cut(s) 1148
AgsI TTSAA 9 cut(s) 82, 169, 197, 314, 413, 587, 1256, 1264, 1444
AjiI CACGTC 1 cut(s) 8
AjuI GAANNNNNNNTTGG 4 cut(s) 131, 163, 1146, 1178
AluBI AGCT 3 cut(s) 32, 565, 1349
AluI AGCT 3 cut(s) 32, 565, 1349
Alw21I GWGCWC 2 cut(s) 800, 1049
Alw26I GTCTC 1 cut(s) 680
AlwI GGATC 2 cut(s) 537, 715
AlwNI CAGNNNCTG 1 cut(s) 965
Ama87I CYCGRG 1 cut(s) 1312
AoxI GGCC 2 cut(s) 784, 850
ApeKI GCWGC 2 cut(s) 949, 1349
ApoI RAATTY 3 cut(s) 199, 336, 419
AsiGI ACCGGT 1 cut(s) 1148
AspLEI GCGC 2 cut(s) 346, 541
AspS9I GGNCC 3 cut(s) 784, 889, 1360
AsuHPI GGTGA 5 cut(s) 992, 1138, 1163, 1283, 1301
AsuNHI GCTAGC 1 cut(s) 1037
AvaI CYCGRG 1 cut(s) 1312
AvaII GGWCC 2 cut(s) 889, 1360
BanII GRGCYC 1 cut(s) 496
BbrPI CACGTG 1 cut(s) 499
BbsI GAAGAC 5 cut(s) 95, 267, 537, 1161, 1197
Bbv12I GWGCWC 2 cut(s) 800, 1049
BbvI GCAGC 2 cut(s) 961, 1336
BccI CCATC 1 cut(s) 702
BcoDI GTCTC 1 cut(s) 680
BfaI CTAG 7 cut(s) 56, 464, 533, 720, 812, 1038, 1082
BfmI CTRYAG 1 cut(s) 741
BfoI RGCGCY 1 cut(s) 347
BglII AGATCT 1 cut(s) 75
BisI GCNGC 2 cut(s) 950, 1350
BlpI GCTNAGC 1 cut(s) 28
BlsI GCNGC 2 cut(s) 951, 1351
Bme18I GGWCC 2 cut(s) 889, 1360
BmeT110I CYCGRG 1 cut(s) 1312
BmgBI CACGTC 1 cut(s) 8
BmgT120I GGNCC 3 cut(s) 784, 889, 1360
BmiI GGNNCC 1 cut(s) 1362
BmrI ACTGGG 1 cut(s) 565
BmsI GCATC 5 cut(s) 73, 231, 638, 706, 1406
BmtI GCTAGC 1 cut(s) 1041
BmuI ACTGGG 1 cut(s) 565
BpiI GAAGAC 5 cut(s) 95, 267, 537, 1161, 1197
BpmI CTGGAG 1 cut(s) 111
Bpu1102I GCTNAGC 1 cut(s) 28
BpuEI CTTGAG 1 cut(s) 1316
BsaAI YACGTR 1 cut(s) 499
BsaJI CCNNGG 2 cut(s) 1313, 1353
BsaWI WCCGGW 2 cut(s) 1148, 1268
BsaXI ACNNNNNCTCC 3 cut(s) 27, 740, 770
Bsc4I CCNNNNNNNGG 7 cut(s) 190, 555, 835, 859, 898, 1021, 1453
Bse118I RCCGGY 2 cut(s) 1148, 1218
Bse1I ACTGG 5 cut(s) 94, 195, 560, 943, 970
Bse3DI GCAATG 2 cut(s) 1178, 1233
BseDI CCNNGG 2 cut(s) 1313, 1353
BseGI GGATG 2 cut(s) 508, 1030
BseLI CCNNNNNNNGG 7 cut(s) 190, 555, 835, 859, 898, 1021, 1453
BseMI GCAATG 2 cut(s) 1178, 1233
BseMII CTCAG 3 cut(s) 246, 386, 1083
BseNI ACTGG 5 cut(s) 94, 195, 560, 943, 970
BseRI GAGGAG 2 cut(s) 808, 1370
BseXI GCAGC 2 cut(s) 961, 1336
BseYI CCCAGC 1 cut(s) 1452
BshFI GGCC 2 cut(s) 786, 852
BshTI ACCGGT 1 cut(s) 1148
BsiHKAI GWGCWC 2 cut(s) 800, 1049
BsiHKCI CYCGRG 1 cut(s) 1312
BsiSI CCGG 3 cut(s) 1149, 1219, 1269
BslFI GGGAC 2 cut(s) 165, 1346
BslI CCNNNNNNNGG 7 cut(s) 190, 555, 835, 859, 898, 1021, 1453
BsmAI GTCTC 1 cut(s) 680
BsmBI CGTCTC 1 cut(s) 680
BsmFI GGGAC 2 cut(s) 165, 1346
BsnI GGCC 2 cut(s) 786, 852
BsoBI CYCGRG 1 cut(s) 1312
Bsp1286I GDGCHC 3 cut(s) 496, 800, 1049
Bsp143I GATC 3 cut(s) 75, 529, 707
Bsp1720I GCTNAGC 1 cut(s) 28
BspACI CCGC 1 cut(s) 25
BspANI GGCC 2 cut(s) 786, 852
BspCNI CTCAG 3 cut(s) 247, 387, 1084
BspLI GGNNCC 1 cut(s) 1362
BspOI GCTAGC 1 cut(s) 1041
BspPI GGATC 2 cut(s) 537, 715
BsrDI GCAATG 2 cut(s) 1178, 1233
BsrFI RCCGGY 2 cut(s) 1148, 1218
BsrI ACTGG 5 cut(s) 94, 195, 560, 943, 970
BssAI RCCGGY 2 cut(s) 1148, 1218
BssECI CCNNGG 2 cut(s) 1313, 1353
BssMI GATC 3 cut(s) 75, 529, 707
Bst4CI ACNGT 4 cut(s) 158, 325, 742, 1160
Bst6I CTCTTC 3 cut(s) 344, 912, 1136
BstAPI GCANNNNNTGC 1 cut(s) 566
BstBAI YACGTR 1 cut(s) 499
BstC8I GCNNGC 3 cut(s) 567, 1039, 1220
BstDEI CTNAG 5 cut(s) 28, 255, 395, 824, 1092
BstEII GGTNACC 2 cut(s) 1144, 1271
BstENI CCTNNNNNAGG 2 cut(s) 896, 1019
BstF5I GGATG 2 cut(s) 508, 1030
BstH2I RGCGCY 1 cut(s) 347
BstHHI GCGC 2 cut(s) 346, 541
BstKTI GATC 3 cut(s) 78, 532, 710
BstMAI GTCTC 1 cut(s) 680
BstMBI GATC 3 cut(s) 75, 529, 707
BstMWI GCNNNNNNNGC 2 cut(s) 458, 566
BstNSI RCATGY 1 cut(s) 1242
BstPI GGTNACC 2 cut(s) 1144, 1271
BstSFI CTRYAG 1 cut(s) 741
BstV1I GCAGC 2 cut(s) 961, 1336
BstV2I GAAGAC 5 cut(s) 95, 267, 537, 1161, 1197
BstX2I RGATCY 2 cut(s) 75, 529
BstXI CCANNNNNNTGG 1 cut(s) 1064
BstYI RGATCY 2 cut(s) 75, 529
BsuRI GGCC 2 cut(s) 786, 852
BtrI CACGTC 1 cut(s) 8
BtsCI GGATG 2 cut(s) 508, 1030
BtsI GCAGTG 2 cut(s) 1247, 1431
BtsIMutI CAGTG 8 cut(s) 154, 521, 936, 1165, 1247, 1407, 1431, 1462
Cac8I GCNNGC 3 cut(s) 567, 1039, 1220
CaiI CAGNNNCTG 1 cut(s) 965
CfoI GCGC 2 cut(s) 346, 541
Cfr10I RCCGGY 2 cut(s) 1148, 1218
Cfr13I GGNCC 3 cut(s) 784, 889, 1360
CseI GACGC 1 cut(s) 817
Csp6I GTAC 4 cut(s) 159, 723, 904, 1373
CspAI ACCGGT 1 cut(s) 1148
CviAII CATG 5 cut(s) 219, 332, 781, 977, 1239
CviQI GTAC 4 cut(s) 159, 723, 904, 1373
DdeI CTNAG 5 cut(s) 28, 255, 395, 824, 1092
DpnI GATC 3 cut(s) 77, 531, 709
DpnII GATC 3 cut(s) 75, 529, 707
DraIII CACNNNGTG 1 cut(s) 859
DrdI GACNNNNNNGTC 1 cut(s) 1010
DseDI GACNNNNNNGTC 1 cut(s) 1010
EaeI YGGCCR 1 cut(s) 850
Eam1104I CTCTTC 3 cut(s) 344, 912, 1136
EarI CTCTTC 3 cut(s) 344, 912, 1136
Eco24I GRGCYC 1 cut(s) 496
Eco47I GGWCC 2 cut(s) 889, 1360
Eco57I CTGAAG 4 cut(s) 368, 545, 854, 1117
Eco72I CACGTG 1 cut(s) 499
Eco88I CYCGRG 1 cut(s) 1312
Eco91I GGTNACC 2 cut(s) 1144, 1271
EcoNI CCTNNNNNAGG 2 cut(s) 896, 1019
EcoO109I RGGNCCY 2 cut(s) 889, 1360
EcoO65I GGTNACC 2 cut(s) 1144, 1271
EcoRI GAATTC 1 cut(s) 419
EcoT22I ATGCAT 1 cut(s) 224
EcoT38I GRGCYC 1 cut(s) 496
Esp3I CGTCTC 1 cut(s) 680
FaeI CATG 5 cut(s) 222, 335, 784, 980, 1242
FalI AAGNNNNNCTT 4 cut(s) 431, 463, 665, 697
FaqI GGGAC 2 cut(s) 165, 1346
FatI CATG 5 cut(s) 218, 331, 780, 976, 1238
FauNDI CATATG 1 cut(s) 135
FblI GTMKAC 2 cut(s) 777, 970
Fnu4HI GCNGC 2 cut(s) 950, 1350
FokI GGATG 2 cut(s) 515, 1037
FriOI GRGCYC 1 cut(s) 496
Fsp4HI GCNGC 2 cut(s) 950, 1350
FspBI CTAG 7 cut(s) 56, 464, 533, 720, 812, 1038, 1082
GlaI GCGC 2 cut(s) 345, 540
GluI GCNGC 2 cut(s) 950, 1350
GsaI CCCAGC 1 cut(s) 1456
GsuI CTGGAG 1 cut(s) 111
HaeII RGCGCY 1 cut(s) 347
HaeIII GGCC 2 cut(s) 786, 852
HapII CCGG 3 cut(s) 1149, 1219, 1269
HgaI GACGC 1 cut(s) 817
HhaI GCGC 2 cut(s) 346, 541
Hin1II CATG 5 cut(s) 222, 335, 784, 980, 1242
Hin6I GCGC 2 cut(s) 344, 539
HinP1I GCGC 2 cut(s) 344, 539
HindIII AAGCTT 1 cut(s) 563
HinfI GANTC 5 cut(s) 52, 282, 413, 1109, 1306
HpaII CCGG 3 cut(s) 1149, 1219, 1269
HphI GGTGA 5 cut(s) 992, 1138, 1163, 1283, 1301
Hpy166II GTNNAC 5 cut(s) 214, 392, 778, 906, 971
Hpy188I TCNGA 8 cut(s) 69, 287, 418, 760, 772, 945, 1003, 1093
Hpy188III TCNNGA 5 cut(s) 226, 617, 705, 1057, 1363
Hpy8I GTNNAC 5 cut(s) 214, 392, 778, 906, 971
Hpy99I CGWCG 1 cut(s) 9
HpyAV CCTTC 7 cut(s) 308, 361, 520, 581, 595, 829, 1135
HpyCH4III ACNGT 4 cut(s) 158, 325, 742, 1160
HpyCH4IV ACGT 5 cut(s) 7, 84, 207, 498, 1368
HpyCH4V TGCA 6 cut(s) 130, 222, 569, 1176, 1238, 1424
HpyF10VI GCNNNNNNNGC 2 cut(s) 458, 566
HpyF3I CTNAG 5 cut(s) 28, 255, 395, 824, 1092
HpySE526I ACGT 5 cut(s) 7, 84, 207, 498, 1368
Hsp92II CATG 5 cut(s) 222, 335, 784, 980, 1242
HspAI GCGC 2 cut(s) 344, 539
KroI GCCGGC 1 cut(s) 1218
KroNI GCCGGC 1 cut(s) 1220
Kzo9I GATC 3 cut(s) 75, 529, 707
LmnI GCTCC 2 cut(s) 270, 795
Lsp1109I GCAGC 2 cut(s) 961, 1336
LweI GCATC 5 cut(s) 73, 231, 638, 706, 1406
MaeI CTAG 7 cut(s) 56, 464, 533, 720, 812, 1038, 1082
MaeII ACGT 5 cut(s) 7, 84, 207, 498, 1368
MaeIII GTNAC 7 cut(s) 85, 250, 664, 934, 1144, 1245, 1271
MalI GATC 3 cut(s) 77, 531, 709
MboI GATC 3 cut(s) 75, 529, 707
MfeI CAATTG 1 cut(s) 1032
MflI RGATCY 2 cut(s) 75, 529
MhlI GDGCHC 3 cut(s) 496, 800, 1049
MluCI AATT 6 cut(s) 164, 199, 336, 419, 801, 1032
MlyI GAGTC 2 cut(s) 61, 291
Mph1103I ATGCAT 1 cut(s) 224
MroNI GCCGGC 1 cut(s) 1218
MslI CAYNNNNRTG 3 cut(s) 69, 501, 978
MspI CCGG 3 cut(s) 1149, 1219, 1269
MunI CAATTG 1 cut(s) 1032
MwoI GCNNNNNNNGC 2 cut(s) 458, 566
NaeI GCCGGC 1 cut(s) 1220
NdeI CATATG 1 cut(s) 135
NdeII GATC 3 cut(s) 75, 529, 707
NgoMIV GCCGGC 1 cut(s) 1218
NheI GCTAGC 1 cut(s) 1037
NlaIII CATG 5 cut(s) 222, 335, 784, 980, 1242
NlaIV GGNNCC 1 cut(s) 1362
NmeAIII GCCGAG 1 cut(s) 1378
NmuCI GTSAC 5 cut(s) 250, 934, 1144, 1245, 1271
NsiI ATGCAT 1 cut(s) 224
NspI RCATGY 1 cut(s) 1242
PdiI GCCGGC 1 cut(s) 1220
PfeI GAWTC 3 cut(s) 413, 1109, 1306
PflMI CCANNNNNTGG 3 cut(s) 190, 555, 859
PinAI ACCGGT 1 cut(s) 1148
PkrI GCNGC 2 cut(s) 951, 1351
PleI GAGTC 2 cut(s) 60, 290
PmaCI CACGTG 1 cut(s) 499
PmlI CACGTG 1 cut(s) 499
PpsI GAGTC 2 cut(s) 60, 290
Ppu21I YACGTR 1 cut(s) 499
PpuMI RGGWCCY 2 cut(s) 889, 1360
Psp1406I AACGTT 2 cut(s) 84, 1368
Psp5II RGGWCCY 2 cut(s) 889, 1360
PspCI CACGTG 1 cut(s) 499
PspEI GGTNACC 2 cut(s) 1144, 1271
PspFI CCCAGC 1 cut(s) 1452
PspN4I GGNNCC 1 cut(s) 1362
PspPI GGNCC 3 cut(s) 784, 889, 1360
PspPPI RGGWCCY 2 cut(s) 889, 1360
PsrI GAACNNNNNNTAC 2 cut(s) 597, 629
PstNI CAGNNNCTG 1 cut(s) 965
PsuI RGATCY 2 cut(s) 75, 529
RsaI GTAC 4 cut(s) 160, 724, 905, 1374
RsaNI GTAC 4 cut(s) 159, 723, 904, 1373
RseI CAYNNNNRTG 3 cut(s) 69, 501, 978
SatI GCNGC 2 cut(s) 950, 1350
Sau3AI GATC 3 cut(s) 75, 529, 707
Sau96I GGNCC 3 cut(s) 784, 889, 1360
SchI GAGTC 2 cut(s) 61, 291
SduI GDGCHC 3 cut(s) 496, 800, 1049
SfaNI GCATC 5 cut(s) 73, 231, 638, 706, 1406
SfcI CTRYAG 1 cut(s) 741
SgrAI CRCCGGYG 1 cut(s) 1148
SinI GGWCC 2 cut(s) 889, 1360
SmiMI CAYNNNNRTG 3 cut(s) 69, 501, 978
SmlI CTYRAG 1 cut(s) 1295
SmoI CTYRAG 1 cut(s) 1295
Sse9I AATT 6 cut(s) 164, 199, 336, 419, 801, 1032
SsiI CCGC 1 cut(s) 25
SspI AATATT 1 cut(s) 1063
SspMI CTAG 7 cut(s) 56, 464, 533, 720, 812, 1038, 1082
TaaI ACNGT 4 cut(s) 158, 325, 742, 1160
TaiI ACGT 5 cut(s) 10, 87, 210, 501, 1371
TasI AATT 6 cut(s) 164, 199, 336, 419, 801, 1032
TatI WGTACW 3 cut(s) 158, 722, 903
TfiI GAWTC 3 cut(s) 413, 1109, 1306
TscAI CASTG 7 cut(s) 161, 528, 943, 1165, 1254, 1407, 1431
TseFI GTSAC 5 cut(s) 250, 934, 1144, 1245, 1271
TseI GCWGC 2 cut(s) 949, 1349
Tsp45I GTSAC 5 cut(s) 250, 934, 1144, 1245, 1271
TspDTI ATGAA 4 cut(s) 152, 348, 519, 930
TspRI CASTG 7 cut(s) 161, 528, 943, 1165, 1254, 1407, 1431
Van91I CCANNNNNTGG 3 cut(s) 190, 555, 859
VpaK11BI GGWCC 2 cut(s) 889, 1360
XagI CCTNNNNNAGG 2 cut(s) 896, 1019
XapI RAATTY 3 cut(s) 199, 336, 419
XceI RCATGY 1 cut(s) 1242
XcmI CCANNNNNNNNNTGG 1 cut(s) 962
XmiI GTMKAC 2 cut(s) 777, 970
XspI CTAG 7 cut(s) 56, 464, 533, 720, 812, 1038, 1082
Zsp2I ATGCAT 1 cut(s) 224
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.