Rh3BG249400

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0000030
Physical Location & Seq
Reverse (-)
23773029 .. 23776416
3388 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG249400.1

Sequence Viewer

Length: 2358 bp
ATGATTTCGCTGACTGAGAACGGAGTCACGGAGCCAATAAGTAGTGAGGGCGGCATGCAATCTGACCGGAGTGAAGTGGGGGCTGGCACAAATAATTCGATGCTTACATTAAAATCATCATCGGGCTGTACAAAGGAGACAGGTTGTTCCCTTGAAGACTCCATTGGACATGATGTTGGGCAGACTAAATTGGATAAGTGTGATGTCATACCTGGAGACTGTCCGGTGAGTCCCATAGTAGGTCGACGCATGAGGGAATTTAGATCAATATGTACTGGATTGTCAGAAGAGAAGAAAATAGCTATAGATGCAACGGGTTTTGGGGCTATATTCACGTTCAGGTGCAGCGAACTGAACGTCCTTTTATGCCACATGATGTGCAACAACTTTGATGTCGAAAACTCAACGATCAAGATTCCTGGGAGACATTTAACGGTGACCGCTGAAGATTTCCGCCATGTCATGAGTGTAAGGGATGGTGGGGGTGACGTAGATTTAACAGGAAGCTTGGCTGAACCTGACATTGTTCAGTTGAAGTCTAAATTTTGTGGTGTTGAGGACGAAATAAGCTTGGAAGTTGTGGGGAAGATGGTGGTTGAATCAGAAACTGCCGATGAAACATTTGTAATAAGTTTATGTCTTTATGCCCTGTCAACTATTATTTTCCCAATTGAAAGTGATGCAGTGGATCCGAGGCTGCTTCTCGCCCTAAAGGATCCAAAAACAATTAGCACAAAAAACTGGGCGTCCTTTGCATTAAGAAATCTTGTTGAAGGAGTTGGAAGGTATAAGAATGGGGTGTCATCAACTGTGAATGGATGTATTGCATTTCTGCAGCTTTTCTATTTGGATGCAATGCTAATGAAGTTCCTAGTTATTCCGACATACACATCTCCGGTACTATGTTGGAATAACAAGCAAGCAAGAATTATGTATGATCAAGCAGAGGCTAATGGTGGGTATTACTCGACTGGTATAATAGCGACCAAGCGTTGGTCCACCACTCGATTCCTAGATAATGTCGGATCTGTTGATGCAAGAACAGGACTGAAAACAACTATTGTTGAAGATCTACACAAGGTTAGGAATGATGTTGATGCTTTCAAATGCGAATTTCAGGAGGTTAGATCCTGCATATCTCATATAGAACCGGATATGGTTGGGCTCCGCAATGCTATTATGACACTGCAAGCATCTATTTCTGAAATGAGGGAGAGAGGGATTAGTAACATGGTTGTAGAAGTGATGAAGGAAGTTCTTGATGAGGAGGGTCCGAGTGACCAAAAAGGGGGGGATGAATTAGATATGTATGAAGATGACATAGTTCCTCGTCAGACGGGGTCGCCAAGTGTCGGTTGGCGTCATCAACCTAATATGGTTGATATGGACGACAAAAGGTTCTCGTTGAAGCGAAAATCAACCAACGAAAGCATGGAACATGATGATATGGTGAAATTCTGTGAAGTTGCTGATATATCGAACAGTGAATCGTTTTTGATTACTTACTTGTTCAGCAAGGTGATGACTGAGTGTGACAGTCTTGGAAGTCGGGAGATTGCAAGGTATGGAGATCATAGTATCTCTAGATGGGACCTAGGTTGCCTTTCACCGATGCAGTGTATCACAAGTCACATTGTAGACATATCTGTTTTGTACCTATTTGACAAACAAAGCGACATATGGTTCATGCCCACATATTTCTCGGAACGTGCTAAGGATTACGCAAGTGGCAGTGTTGTGGACGGTCTGGTATCGTCTGTGGTGACTATATGTCGGCTTCGTAGATATAGTGGCCGATTGGGTTCGTACAAGCAGATTTTCTTCCCTCTGCAAGACGATGTTGTGGATAACTGGTTTTTGGTTGTTTTCAACCCGGATGAGGGAGAATGTGAGATTTGGGACAGCTGCCCCGACAAGGATGCTAGAGAGCGTCATGAGGCTTATGCAAATGGTGTGATGGAGCTTTTTCAGAAGGTTTTCTGTAATCAAATCAGACTACTTCCTGCATTGTATGCAAGACTAGCATCTGTGTGCACAGTTTATCCTAAAGAAGCCCCAACCAACGGAAAGACCGAGGATTCTGGTATATTTTTAATCAGGAACATGCAGTATTACCGGAAACGTTGGTTTGAAGGGTTCAACTCCGCCGACCAGAGGATCCGGCTTGCTCTTGACATAGTCAATCATCCAATGAATGCAGTACGCGTTTCTGTATGGGCAGCAGCAGCTCAGGAAACTCCAATTGATGCAAAATCACTTGGACGAGCAGCGTACAACGGGAACTTCATCCGAAATCGCCATATCCCACTTGATATTTCAGGAATCAAATTTAAGGCTCGTCGCACTGCAAGGCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

785

Amino Acids

87.89

Weight (kDa)

5.26

Isoelectric Point (pI)

41.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 993
AccI GTMKAC 2 cut(s) 244, 1638
AccII CGCG 1 cut(s) 2205
AciI CCGC 5 cut(s) 51, 441, 454, 1168, 2145
AclI AACGTT 1 cut(s) 2122
AclWI GGATC 8 cut(s) 683, 696, 710, 723, 1033, 1122, 2152, 2165
AcoI YGGCCR 1 cut(s) 1792
AcsI RAATTY 5 cut(s) 257, 542, 1112, 1454, 2327
AcuI CTGAAG 1 cut(s) 465
AcyI GRCGYC 2 cut(s) 746, 1360
AfaI GTAC 7 cut(s) 130, 274, 900, 1655, 1808, 2202, 2273
AfiI CCNNNNNNNGG 9 cut(s) 239, 993, 1288, 1352, 1879, 1880, 1915, 2063, 2154
AflIII ACRYGT 1 cut(s) 2203
AhdI GACNNNNNGTC 1 cut(s) 1770
AjnI CCWGG 2 cut(s) 211, 418
AjuI GAANNNNNNNTTGG 2 cut(s) 147, 179
AloI GAACNNNNNNTCC 2 cut(s) 342, 374
AluBI AGCT 7 cut(s) 302, 507, 570, 838, 1905, 1963, 2228
AluI AGCT 7 cut(s) 302, 507, 570, 838, 1905, 1963, 2228
Alw21I GWGCWC 1 cut(s) 2036
Alw26I GTCTC 3 cut(s) 131, 210, 418
Alw44I GTGCAC 1 cut(s) 2032
AlwI GGATC 8 cut(s) 683, 696, 710, 723, 1033, 1122, 2152, 2165
AlwNI CAGNNNCTG 1 cut(s) 608
AoxI GGCC 1 cut(s) 1792
ApaLI GTGCAC 1 cut(s) 2032
ApeKI GCWGC 8 cut(s) 345, 697, 835, 1905, 2219, 2222, 2225, 2267
ApoI RAATTY 5 cut(s) 257, 542, 1112, 1454, 2327
ArsI GACNNNNNNTTYG 2 cut(s) 342, 374
Asp700I GAANNNNTTC 1 cut(s) 1976
AspA2I CCTAGG 1 cut(s) 1594
AspS9I GGNCC 3 cut(s) 996, 1271, 1591
AsuC2I CCSGG 1 cut(s) 1874
AsuHPI GGTGA 7 cut(s) 238, 448, 497, 1462, 1531, 1599, 1774
AvaII GGWCC 3 cut(s) 996, 1271, 1591
AvrII CCTAGG 1 cut(s) 1594
BaeGI GKGCMC 1 cut(s) 2036
BamHI GGATCC 3 cut(s) 688, 715, 2157
BanII GRGCYC 1 cut(s) 1167
BbsI GAAGAC 1 cut(s) 162
Bbv12I GWGCWC 1 cut(s) 2036
BbvI GCAGC 8 cut(s) 357, 684, 847, 1892, 2231, 2234, 2237, 2279
BccI CCATC 4 cut(s) 470, 583, 1581, 1951
BcgI CGANNNNNNTGC 2 cut(s) 1901, 1935
BciT130I CCWGG 2 cut(s) 213, 420
BclI TGATCA 1 cut(s) 937
BcnI CCSGG 1 cut(s) 1874
BcoDI GTCTC 3 cut(s) 131, 210, 418
BfaI CTAG 6 cut(s) 872, 1013, 1584, 1595, 1923, 2021
BfmI CTRYAG 2 cut(s) 303, 833
BglII AGATCT 1 cut(s) 1069
BisI GCNGC 9 cut(s) 52, 346, 698, 836, 1906, 2220, 2223, 2226, 2268
BlnI CCTAGG 1 cut(s) 1594
BlsI GCNGC 9 cut(s) 53, 347, 699, 837, 1907, 2221, 2224, 2227, 2269
Bme1390I CCNGG 3 cut(s) 213, 420, 1874
Bme18I GGWCC 3 cut(s) 996, 1271, 1591
BmeRI GACNNNNNGTC 1 cut(s) 1770
BmgT120I GGNCC 3 cut(s) 996, 1271, 1591
BmiI GGNNCC 7 cut(s) 33, 690, 717, 1166, 1272, 1592, 2159
BmrFI CCNGG 3 cut(s) 213, 420, 1874
BmrI ACTGGG 1 cut(s) 751
BmuI ACTGGG 1 cut(s) 751
BpiI GAAGAC 1 cut(s) 162
BpmI CTGGAG 1 cut(s) 234
Bpu10I CCTNAGC 2 cut(s) 1713, 2229
BpuMI CCSGG 1 cut(s) 1874
BsaHI GRCGYC 2 cut(s) 746, 1360
BsaJI CCNNGG 4 cut(s) 419, 692, 1594, 2073
BsaWI WCCGGW 5 cut(s) 66, 223, 895, 1150, 2115
Bsc4I CCNNNNNNNGG 9 cut(s) 239, 993, 1288, 1352, 1879, 1880, 1915, 2063, 2154
Bse1I ACTGG 4 cut(s) 280, 746, 976, 1856
Bse3DI GCAATG 2 cut(s) 861, 1177
BseBI CCWGG 2 cut(s) 213, 420
BseDI CCNNGG 4 cut(s) 419, 692, 1594, 2073
BseGI GGATG 8 cut(s) 481, 824, 856, 1300, 1882, 1924, 2185, 2286
BseLI CCNNNNNNNGG 9 cut(s) 239, 993, 1288, 1352, 1879, 1880, 1915, 2063, 2154
BseMI GCAATG 2 cut(s) 861, 1177
BseMII CTCAG 3 cut(s) 6, 1518, 2243
BseNI ACTGG 4 cut(s) 280, 746, 976, 1856
BseRI GAGGAG 1 cut(s) 1280
BseSI GKGCMC 1 cut(s) 2036
BseXI GCAGC 8 cut(s) 357, 684, 847, 1892, 2231, 2234, 2237, 2279
BsgI GTGCAG 1 cut(s) 364
Bsh1236I CGCG 1 cut(s) 2205
BshFI GGCC 1 cut(s) 1794
BsiHKAI GWGCWC 1 cut(s) 2036
BsiSI CCGG 7 cut(s) 67, 224, 896, 1151, 1874, 2116, 2161
BslFI GGGAC 3 cut(s) 216, 1604, 1913
BslI CCNNNNNNNGG 9 cut(s) 239, 993, 1288, 1352, 1879, 1880, 1915, 2063, 2154
BsmAI GTCTC 3 cut(s) 131, 210, 418
BsmFI GGGAC 3 cut(s) 216, 1604, 1913
BsmI GAATGC 1 cut(s) 2200
BsnI GGCC 1 cut(s) 1794
Bsp1286I GDGCHC 2 cut(s) 1167, 2036
Bsp1407I TGTACA 1 cut(s) 128
BspACI CCGC 5 cut(s) 51, 441, 454, 1168, 2145
BspANI GGCC 1 cut(s) 1794
BspCNI CTCAG 3 cut(s) 7, 1519, 2242
BspFNI CGCG 1 cut(s) 2205
BspHI TCATGA 2 cut(s) 462, 1933
BspLI GGNNCC 7 cut(s) 33, 690, 717, 1166, 1272, 1592, 2159
BspMAI CTGCAG 1 cut(s) 837
BspPI GGATC 8 cut(s) 683, 696, 710, 723, 1033, 1122, 2152, 2165
BsrDI GCAATG 2 cut(s) 861, 1177
BsrGI TGTACA 1 cut(s) 128
BsrI ACTGG 4 cut(s) 280, 746, 976, 1856
BssECI CCNNGG 4 cut(s) 419, 692, 1594, 2073
BssNI GRCGYC 2 cut(s) 746, 1360
BssT1I CCWWGG 1 cut(s) 1594
Bst2UI CCWGG 2 cut(s) 213, 420
Bst4CI ACNGT 7 cut(s) 221, 436, 811, 1484, 1538, 1745, 2038
Bst6I CTCTTC 1 cut(s) 282
BstACI GRCGYC 2 cut(s) 746, 1360
BstAPI GCANNNNNTGC 1 cut(s) 2012
BstAUI TGTACA 1 cut(s) 128
BstC8I GCNNGC 5 cut(s) 56, 85, 921, 1191, 2166
BstDEI CTNAG 4 cut(s) 15, 1527, 1713, 2229
BstEII GGTNACC 1 cut(s) 436
BstF5I GGATG 8 cut(s) 481, 824, 856, 1300, 1882, 1924, 2185, 2286
BstFNI CGCG 1 cut(s) 2205
BstMAI GTCTC 3 cut(s) 131, 210, 418
BstMWI GCNNNNNNNGC 5 cut(s) 308, 752, 2012, 2021, 2225
BstNI CCWGG 2 cut(s) 213, 420
BstNSI RCATGY 2 cut(s) 58, 2107
BstPI GGTNACC 1 cut(s) 436
BstSCI CCNGG 3 cut(s) 211, 418, 1872
BstSFI CTRYAG 2 cut(s) 303, 833
BstSLI GKGCMC 1 cut(s) 2036
BstUI CGCG 1 cut(s) 2205
BstV1I GCAGC 8 cut(s) 357, 684, 847, 1892, 2231, 2234, 2237, 2279
BstV2I GAAGAC 1 cut(s) 162
BstX2I RGATCY 6 cut(s) 688, 715, 1025, 1069, 1127, 2157
BstYI RGATCY 6 cut(s) 688, 715, 1025, 1069, 1127, 2157
BsuRI GGCC 1 cut(s) 1794
BtsCI GGATG 8 cut(s) 481, 824, 856, 1300, 1882, 1924, 2185, 2286
BtsI GCAGTG 5 cut(s) 690, 1184, 1622, 1738, 2343
BtsIMutI CAGTG 7 cut(s) 690, 1184, 1489, 1622, 1738, 2343, 2353
Cac8I GCNNGC 5 cut(s) 56, 85, 921, 1191, 2166
CaiI CAGNNNCTG 1 cut(s) 608
CciI TCATGA 2 cut(s) 462, 1933
Cfr13I GGNCC 3 cut(s) 996, 1271, 1591
CseI GACGC 4 cut(s) 255, 735, 1349, 1919
Csp6I GTAC 7 cut(s) 129, 273, 899, 1654, 1807, 2201, 2272
CviQI GTAC 7 cut(s) 129, 273, 899, 1654, 1807, 2201, 2272
DdeI CTNAG 4 cut(s) 15, 1527, 1713, 2229
DriI GACNNNNNGTC 1 cut(s) 1770
EaeI YGGCCR 1 cut(s) 1792
Eam1104I CTCTTC 1 cut(s) 282
Eam1105I GACNNNNNGTC 1 cut(s) 1770
EarI CTCTTC 1 cut(s) 282
EciI GGCGGA 2 cut(s) 443, 2134
Eco130I CCWWGG 1 cut(s) 1594
Eco24I GRGCYC 1 cut(s) 1167
Eco47I GGWCC 3 cut(s) 996, 1271, 1591
Eco57I CTGAAG 1 cut(s) 465
Eco91I GGTNACC 1 cut(s) 436
EcoO109I RGGNCCY 1 cut(s) 1591
EcoO65I GGTNACC 1 cut(s) 436
EcoRII CCWGG 2 cut(s) 211, 418
EcoT14I CCWWGG 1 cut(s) 1594
EcoT38I GRGCYC 1 cut(s) 1167
ErhI CCWWGG 1 cut(s) 1594
FaqI GGGAC 3 cut(s) 216, 1604, 1913
FauNDI CATATG 1 cut(s) 1679
FbaI TGATCA 1 cut(s) 937
FblI GTMKAC 2 cut(s) 244, 1638
Fnu4HI GCNGC 9 cut(s) 52, 346, 698, 836, 1906, 2220, 2223, 2226, 2268
FokI GGATG 8 cut(s) 488, 831, 863, 1307, 1889, 1931, 2172, 2273
FriOI GRGCYC 1 cut(s) 1167
Fsp4HI GCNGC 9 cut(s) 52, 346, 698, 836, 1906, 2220, 2223, 2226, 2268
FspBI CTAG 6 cut(s) 872, 1013, 1584, 1595, 1923, 2021
GluI GCNGC 9 cut(s) 52, 346, 698, 836, 1906, 2220, 2223, 2226, 2268
GsuI CTGGAG 1 cut(s) 234
HaeIII GGCC 1 cut(s) 1794
HapII CCGG 7 cut(s) 67, 224, 896, 1151, 1874, 2116, 2161
HgaI GACGC 4 cut(s) 255, 735, 1349, 1919
Hin1I GRCGYC 2 cut(s) 746, 1360
HincII GTYRAC 2 cut(s) 245, 654
HindII GTYRAC 2 cut(s) 245, 654
HindIII AAGCTT 2 cut(s) 505, 568
HinfI GANTC 9 cut(s) 24, 158, 229, 415, 599, 1008, 1487, 2078, 2322
HpaII CCGG 7 cut(s) 67, 224, 896, 1151, 1874, 2116, 2161
HphI GGTGA 7 cut(s) 238, 448, 497, 1462, 1531, 1599, 1774
Hpy166II GTNNAC 6 cut(s) 245, 654, 999, 1639, 1741, 2034
Hpy8I GTNNAC 6 cut(s) 245, 654, 999, 1639, 1741, 2034
Hpy99I CGWCG 2 cut(s) 249, 2343
HpyAV CCTTC 5 cut(s) 767, 777, 1243, 1966, 2126
HpyCH4III ACNGT 7 cut(s) 221, 436, 811, 1484, 1538, 1745, 2038
HpyCH4IV ACGT 5 cut(s) 335, 357, 489, 1708, 2122
HpyF10VI GCNNNNNNNGC 5 cut(s) 308, 752, 2012, 2021, 2225
HpyF3I CTNAG 4 cut(s) 15, 1527, 1713, 2229
HpySE526I ACGT 5 cut(s) 335, 357, 489, 1708, 2122
Hsp92I GRCGYC 2 cut(s) 746, 1360
Ksp22I TGATCA 1 cut(s) 937
LmnI GCTCC 3 cut(s) 31, 1170, 1960
Lsp1109I GCAGC 8 cut(s) 357, 684, 847, 1892, 2231, 2234, 2237, 2279
MaeI CTAG 6 cut(s) 872, 1013, 1584, 1595, 1923, 2021
MaeII ACGT 5 cut(s) 335, 357, 489, 1708, 2122
MaeIII GTNAC 8 cut(s) 25, 436, 485, 1226, 1277, 1532, 1628, 1762
MboII GAAGA 8 cut(s) 167, 299, 304, 458, 598, 1079, 1325, 1813
MfeI CAATTG 2 cut(s) 669, 2241
MflI RGATCY 6 cut(s) 688, 715, 1025, 1069, 1127, 2157
MhlI GDGCHC 2 cut(s) 1167, 2036
MluI ACGCGT 1 cut(s) 2203
MlyI GAGTC 3 cut(s) 33, 152, 238
MmeI TCCRAC 4 cut(s) 760, 887, 905, 1003
MroXI GAANNNNTTC 1 cut(s) 1976
MseI TTAA 6 cut(s) 110, 431, 497, 758, 2093, 2331
MslI CAYNNNNRTG 1 cut(s) 2029
MspA1I CMGCKG 2 cut(s) 443, 1905
MspI CCGG 7 cut(s) 67, 224, 896, 1151, 1874, 2116, 2161
MspR9I CCNGG 3 cut(s) 213, 420, 1874
MunI CAATTG 2 cut(s) 669, 2241
Mva1269I GAATGC 1 cut(s) 2200
MvaI CCWGG 2 cut(s) 213, 420
MvnI CGCG 1 cut(s) 2205
MwoI GCNNNNNNNGC 5 cut(s) 308, 752, 2012, 2021, 2225
NciI CCSGG 1 cut(s) 1874
NdeI CATATG 1 cut(s) 1679
NlaIV GGNNCC 7 cut(s) 33, 690, 717, 1166, 1272, 1592, 2159
NmuCI GTSAC 7 cut(s) 25, 436, 485, 1277, 1532, 1628, 1762
NspI RCATGY 2 cut(s) 58, 2107
PaeI GCATGC 1 cut(s) 58
PagI TCATGA 2 cut(s) 462, 1933
PcsI WCGNNNNNNNCGW 1 cut(s) 2070
PctI GAATGC 1 cut(s) 2200
PdmI GAANNNNTTC 1 cut(s) 1976
PfeI GAWTC 6 cut(s) 415, 599, 1008, 1487, 2078, 2322
PflFI GACNNNGTC 2 cut(s) 1339, 2177
PflMI CCANNNNNTGG 1 cut(s) 993
PkrI GCNGC 9 cut(s) 53, 347, 699, 837, 1907, 2221, 2224, 2227, 2269
PleI GAGTC 3 cut(s) 32, 152, 237
PpsI GAGTC 3 cut(s) 32, 152, 237
PpuMI RGGWCCY 1 cut(s) 1591
Psp1406I AACGTT 1 cut(s) 2122
Psp5II RGGWCCY 1 cut(s) 1591
Psp6I CCWGG 2 cut(s) 211, 418
PspEI GGTNACC 1 cut(s) 436
PspGI CCWGG 2 cut(s) 211, 418
PspN4I GGNNCC 7 cut(s) 33, 690, 717, 1166, 1272, 1592, 2159
PspPI GGNCC 3 cut(s) 996, 1271, 1591
PspPPI RGGWCCY 1 cut(s) 1591
PstI CTGCAG 1 cut(s) 837
PstNI CAGNNNCTG 1 cut(s) 608
PsuI RGATCY 6 cut(s) 688, 715, 1025, 1069, 1127, 2157
PsyI GACNNNGTC 2 cut(s) 1339, 2177
PvuII CAGCTG 1 cut(s) 1905
RsaI GTAC 7 cut(s) 130, 274, 900, 1655, 1808, 2202, 2273
RsaNI GTAC 7 cut(s) 129, 273, 899, 1654, 1807, 2201, 2272
RseI CAYNNNNRTG 1 cut(s) 2029
SalI GTCGAC 1 cut(s) 243
SaqAI TTAA 6 cut(s) 110, 431, 497, 758, 2093, 2331
SatI GCNGC 9 cut(s) 52, 346, 698, 836, 1906, 2220, 2223, 2226, 2268
Sau96I GGNCC 3 cut(s) 996, 1271, 1591
SchI GAGTC 3 cut(s) 33, 152, 238
ScrFI CCNGG 3 cut(s) 213, 420, 1874
SduI GDGCHC 2 cut(s) 1167, 2036
SfcI CTRYAG 2 cut(s) 303, 833
SinI GGWCC 3 cut(s) 996, 1271, 1591
SmiMI CAYNNNNRTG 1 cut(s) 2029
SphI GCATGC 1 cut(s) 58
SsiI CCGC 5 cut(s) 51, 441, 454, 1168, 2145
SspMI CTAG 6 cut(s) 872, 1013, 1584, 1595, 1923, 2021
StyD4I CCNGG 3 cut(s) 211, 418, 1872
StyI CCWWGG 1 cut(s) 1594
TaaI ACNGT 7 cut(s) 221, 436, 811, 1484, 1538, 1745, 2038
TaiI ACGT 5 cut(s) 338, 360, 492, 1711, 2125
TaqI TCGA 6 cut(s) 98, 244, 396, 968, 1006, 1478
TaqII GACCGA 1 cut(s) 2087
TatI WGTACW 2 cut(s) 128, 272
TauI GCSGC 1 cut(s) 54
TfiI GAWTC 6 cut(s) 415, 599, 1008, 1487, 2078, 2322
Tru1I TTAA 6 cut(s) 110, 431, 497, 758, 2093, 2331
Tru9I TTAA 6 cut(s) 110, 431, 497, 758, 2093, 2331
TscAI CASTG 6 cut(s) 690, 1191, 1489, 1622, 1738, 2350
TseFI GTSAC 7 cut(s) 25, 436, 485, 1277, 1532, 1628, 1762
TseI GCWGC 8 cut(s) 345, 697, 835, 1905, 2219, 2222, 2225, 2267
Tsp45I GTSAC 7 cut(s) 25, 436, 485, 1277, 1532, 1628, 1762
TspDTI ATGAA 8 cut(s) 630, 878, 1262, 1311, 1326, 1675, 2207, 2275
TspGWI ACGGA 3 cut(s) 36, 44, 2079
TspRI CASTG 6 cut(s) 690, 1191, 1489, 1622, 1738, 2350
Tth111I GACNNNGTC 2 cut(s) 1339, 2177
Van91I CCANNNNNTGG 1 cut(s) 993
VneI GTGCAC 1 cut(s) 2032
VpaK11BI GGWCC 3 cut(s) 996, 1271, 1591
XapI RAATTY 5 cut(s) 257, 542, 1112, 1454, 2327
XbaI TCTAGA 1 cut(s) 1583
XceI RCATGY 2 cut(s) 58, 2107
XcmI CCANNNNNNNNNTGG 2 cut(s) 1353, 1429
XmaJI CCTAGG 1 cut(s) 1594
XmiI GTMKAC 2 cut(s) 244, 1638
XmnI GAANNNNTTC 1 cut(s) 1976
XspI CTAG 6 cut(s) 872, 1013, 1584, 1595, 1923, 2021
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.