RLG00000012845

protein desumoylation

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
23047658 .. 23051196
3539 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000012845

Sequence Viewer

Length: 1845 bp
ATGGAGACTATGAGAAAGAAAATCTGCGAAATTGAACCGTCCTTATCTGACATGAAGGTTGGTGCTGTGGAATCTATTGTTGCCGATGTTATTAAAGTTCTGAAGACAACAAGTTCGAACACTGTGCCTCAGGTAGGGGAAAAGGTGCTAGAATCCAAGGAGGACATAGATGGCCATAATTCGTGGACAGACATCACTAAGGAGAAAGAACCGAGAAAGTTATGTCCATGCACCCCAATAGCTACTGATGGCCTTCTGCAGATGAAAATTTCTGACAAAGCTCCACACGAGAAGGTTGATCATATGGCAGATGAGAAGGTGACAGAATCGGCCAACAAAAAAACTTTGACGGGGTTCAACGACTTGAAGGTTAAAAACAAAAACGACAGATTTCCGTCAATGAGAAATCTTTCAAAGAAGGACTCAAAGATACTGAAATTCCTATTTGACAAGGGAGACAACGGAGTAGATGATCCCAGGGAAGAAGTAGCCCGAGATAGAGATATTGGTGTGTCTTATGGTGAATTGCAATGTCTTAGACCAACATTTCCACTTTTGCGCAAGGTCATAGACATATCGGCTGCGTACCTGTATAAGGAGGACTCAAAGTCATGGTTCTTCCCCACCTGTTTTGGGGAACAAGCCTACTCAAATCATGTTTCGTCGAATTCACATGCATTGGTGGCGTCAACTATACACCTTTGTGGGCTACAGAGGTTTCATCGCTGCTTGAAGCGGTGCTCTAAGATATTCATTGCCCTTCACGATGAAATTGAGGATCACTGGTTTATGTTGGTTATGAAACTCGATAGAAAATCTGCCGAGATGTGGGACAGCCTACCAGATATTTTATTACATAAAGTATGTTTGTTACAAGTGCAAATGTTGCTACTGCAGACAATTTTTGAAAATGAAATGACAAAGTCCGATGATGTTCACTACCACTTTCCTTCATTTCGTGTGAAAATTGCCCAGAATAATCCAACTAATGACAATAACTATGACAGTGGCATCTACATCATAAGACACATGCAGTGTTATGGTGAAAAATGGTTTGAAGGGCGGACTATCCTTGCGCTTGAGATTGTCAATCATCCAAAGAACGAACTACTTAAATTGGTAAGTGCAGCAGCCATTGGTCTAAAAAGGCGCAAGGATAGTGGGCAAGGTTTGTCTACATCTACCAAGCCCCTTTCCTCGACAACTGATCCTACAATTGGCTGTGACAAACTTATGTCAAACAACAATGGCATGTCCCCCACTGGAAGAAAGTGTCGGAGCCACCGCAAGAGAAGTATAATCTATGTGCTTAATGGATATGGGGCAGTTGACGCTAATTACATGTGCGTGATAAGACATGCAGAGATCCTGGATAGTTATCCGGCTAATGGAAAGACAATGTCAAGGATACAAGTTGCACGTTTGGCGATGAACATGTTGGACCGTGTATTTGTGAGAGACATAGCGAAGGATTTAAATCCACATGTATCATTAGGTACTCTCCCTTTTGATATGTCTTCATTTGGTCCAATCCAACGAAATTCTACAGACTGCGGAGTGTTTGTGATAAGAAATATGCAGCATTATGGTACTGATTGGGCAGCCAAGTATGATTCTGATGGTGAGCGTGCAAGTTTGGTGTTGGAGTGTCTTCTTCATCAAAGAAATGATGTACCTGATCTGCATGTAAAGGTGGACCATGCATTGGCTCTTTGGAGGGGAACTGTGCAAGGAAAGCCGGGGCACATAGCATCTGCAGTCATAGTTGTCTCTGATGATTCCAACCCCAGCAGTACCAAGCCTAATCAAGAGAAAATGGTCACTCTGACAGTCCGAATGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

615

Amino Acids

69.33

Weight (kDa)

8.54

Isoelectric Point (pI)

36.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_C48 PF02902 244 - 347 1.8e-09 Ulp1 protease family, C-terminal catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 560
AccB7I CCANNNNNTGG 1 cut(s) 1705
AccI GTMKAC 1 cut(s) 1175
AciI CCGC 4 cut(s) 736, 1063, 1285, 1554
AclWI GGATC 4 cut(s) 467, 786, 1202, 1360
AcoI YGGCCR 2 cut(s) 172, 330
AcsI RAATTY 4 cut(s) 267, 437, 667, 1540
AcuI CTGAAG 1 cut(s) 122
AcyI GRCGYC 1 cut(s) 686
AfaI GTAC 5 cut(s) 587, 1498, 1591, 1674, 1795
AfiI CCNNNNNNNGG 7 cut(s) 134, 595, 633, 828, 1217, 1388, 1705
AflIII ACRYGT 3 cut(s) 1341, 1434, 1483
AgsI TTSAA 7 cut(s) 35, 358, 367, 414, 733, 908, 1058
AhdI GACNNNNNGTC 1 cut(s) 607
AjnI CCWGG 2 cut(s) 476, 1368
AleI CACNNNNGTG 1 cut(s) 702
AluBI AGCT 2 cut(s) 242, 281
AluI AGCT 2 cut(s) 242, 281
Alw21I GWGCWC 1 cut(s) 743
Alw26I GTCTC 3 cut(s) 450, 1452, 1774
AlwI GGATC 4 cut(s) 467, 786, 1202, 1360
Ama87I CYCGRG 1 cut(s) 492
AoxI GGCC 3 cut(s) 172, 250, 330
ApeKI GCWGC 6 cut(s) 581, 726, 1127, 1130, 1579, 1601
ApoI RAATTY 4 cut(s) 267, 437, 667, 1540
ArsI GACNNNNNNTTYG 4 cut(s) 97, 129, 1433, 1465
Asp700I GAANNNNTTC 1 cut(s) 409
AspLEI GCGC 3 cut(s) 561, 1078, 1152
AspS9I GGNCC 3 cut(s) 1441, 1526, 1696
AsuC2I CCSGG 1 cut(s) 1740
AsuHPI GGTGA 4 cut(s) 331, 533, 1055, 1634
AsuII TTCGAA 1 cut(s) 116
AvaI CYCGRG 1 cut(s) 492
AvaII GGWCC 3 cut(s) 1441, 1526, 1696
AxyI CCTNAGG 1 cut(s) 129
BaeGI GKGCMC 1 cut(s) 1746
BalI TGGCCA 1 cut(s) 174
BauI CACGAG 1 cut(s) 287
BbsI GAAGAC 3 cut(s) 110, 1509, 1643
Bbv12I GWGCWC 1 cut(s) 743
BbvI GCAGC 6 cut(s) 568, 713, 1139, 1142, 1591, 1613
BccI CCATC 3 cut(s) 164, 242, 1613
BcgI CGANNNNNNTGC 2 cut(s) 106, 140
BciT130I CCWGG 2 cut(s) 478, 1370
BciVI GTATCC 1 cut(s) 1401
BclI TGATCA 1 cut(s) 298
BcnI CCSGG 1 cut(s) 1740
BcoDI GTCTC 3 cut(s) 450, 1452, 1774
BfaI CTAG 1 cut(s) 149
BfmI CTRYAG 5 cut(s) 257, 710, 893, 1545, 1755
BfuI GTATCC 1 cut(s) 1401
BisI GCNGC 6 cut(s) 582, 727, 1128, 1131, 1580, 1602
BlsI GCNGC 6 cut(s) 583, 728, 1129, 1132, 1581, 1603
Bme1390I CCNGG 3 cut(s) 478, 1370, 1740
Bme18I GGWCC 3 cut(s) 1441, 1526, 1696
BmeRI GACNNNNNGTC 1 cut(s) 607
BmeT110I CYCGRG 1 cut(s) 492
BmgT120I GGNCC 3 cut(s) 1441, 1526, 1696
BmiI GGNNCC 1 cut(s) 1280
BmrFI CCNGG 3 cut(s) 478, 1370, 1740
BmsI GCATC 2 cut(s) 1020, 1760
BpiI GAAGAC 3 cut(s) 110, 1509, 1643
Bpu14I TTCGAA 1 cut(s) 116
BpuEI CTTGAG 1 cut(s) 1100
BpuMI CCSGG 1 cut(s) 1740
BsaBI GATNNNNATC 2 cut(s) 1377, 1476
BsaHI GRCGYC 1 cut(s) 686
BsaJI CCNNGG 4 cut(s) 156, 476, 477, 1739
BsaXI ACNNNNNCTCC 2 cut(s) 1548, 1578
Bsc4I CCNNNNNNNGG 7 cut(s) 134, 595, 633, 828, 1217, 1388, 1705
Bse1I ACTGG 2 cut(s) 788, 1267
Bse21I CCTNAGG 1 cut(s) 129
Bse3DI GCAATG 2 cut(s) 536, 753
Bse8I GATNNNNATC 2 cut(s) 1377, 1476
BseBI CCWGG 2 cut(s) 478, 1370
BseDI CCNNGG 4 cut(s) 156, 476, 477, 1739
BseGI GGATG 1 cut(s) 1093
BseJI GATNNNNATC 2 cut(s) 1377, 1476
BseLI CCNNNNNNNGG 7 cut(s) 134, 595, 633, 828, 1217, 1388, 1705
BseMI GCAATG 2 cut(s) 536, 753
BseMII CTCAG 1 cut(s) 143
BseNI ACTGG 2 cut(s) 788, 1267
BseSI GKGCMC 1 cut(s) 1746
BseXI GCAGC 6 cut(s) 568, 713, 1139, 1142, 1591, 1613
BseYI CCCAGC 1 cut(s) 1787
BsgI GTGCAG 1 cut(s) 1146
BshFI GGCC 3 cut(s) 174, 252, 332
BsiHKAI GWGCWC 1 cut(s) 743
BsiHKCI CYCGRG 1 cut(s) 492
BsiSI CCGG 2 cut(s) 1382, 1739
BslFI GGGAC 2 cut(s) 845, 1240
BslI CCNNNNNNNGG 7 cut(s) 134, 595, 633, 828, 1217, 1388, 1705
BsmAI GTCTC 3 cut(s) 450, 1452, 1774
BsmFI GGGAC 2 cut(s) 845, 1240
BsnI GGCC 3 cut(s) 174, 252, 332
BsoBI CYCGRG 1 cut(s) 492
Bsp119I TTCGAA 1 cut(s) 116
Bsp1286I GDGCHC 2 cut(s) 743, 1746
Bsp143I GATC 6 cut(s) 298, 472, 778, 1207, 1365, 1678
BspACI CCGC 4 cut(s) 736, 1063, 1285, 1554
BspANI GGCC 3 cut(s) 174, 252, 332
BspCNI CTCAG 1 cut(s) 142
BspLI GGNNCC 1 cut(s) 1280
BspMAI CTGCAG 3 cut(s) 261, 897, 1759
BspPI GGATC 4 cut(s) 467, 786, 1202, 1360
BspT104I TTCGAA 1 cut(s) 116
BsrDI GCAATG 2 cut(s) 536, 753
BsrI ACTGG 2 cut(s) 788, 1267
BssECI CCNNGG 4 cut(s) 156, 476, 477, 1739
BssMI GATC 6 cut(s) 298, 472, 778, 1207, 1365, 1678
BssNI GRCGYC 1 cut(s) 686
BssSI CACGAG 1 cut(s) 287
BssT1I CCWWGG 1 cut(s) 156
Bst2BI CACGAG 1 cut(s) 287
Bst2UI CCWGG 2 cut(s) 478, 1370
Bst4CI ACNGT 6 cut(s) 39, 124, 1007, 1445, 1726, 1831
BstACI GRCGYC 1 cut(s) 686
BstAPI GCANNNNNTGC 1 cut(s) 886
BstBI TTCGAA 1 cut(s) 116
BstC8I GCNNGC 1 cut(s) 1629
BstDEI CTNAG 4 cut(s) 129, 198, 536, 744
BstENI CCTNNNNNAGG 2 cut(s) 132, 593
BstF5I GGATG 1 cut(s) 1093
BstHHI GCGC 3 cut(s) 561, 1078, 1152
BstKTI GATC 6 cut(s) 301, 475, 781, 1210, 1368, 1681
BstMAI GTCTC 3 cut(s) 450, 1452, 1774
BstMBI GATC 6 cut(s) 298, 472, 778, 1207, 1365, 1678
BstMWI GCNNNNNNNGC 5 cut(s) 683, 886, 1331, 1424, 1735
BstNI CCWGG 2 cut(s) 478, 1370
BstNSI RCATGY 8 cut(s) 677, 1033, 1255, 1345, 1361, 1438, 1487, 1688
BstSCI CCNGG 3 cut(s) 476, 1368, 1738
BstSFI CTRYAG 5 cut(s) 257, 710, 893, 1545, 1755
BstSLI GKGCMC 1 cut(s) 1746
BstV1I GCAGC 6 cut(s) 568, 713, 1139, 1142, 1591, 1613
BstV2I GAAGAC 3 cut(s) 110, 1509, 1643
BstX2I RGATCY 1 cut(s) 1365
BstYI RGATCY 1 cut(s) 1365
Bsu36I CCTNAGG 1 cut(s) 129
BsuI GTATCC 1 cut(s) 1401
BsuRI GGCC 3 cut(s) 174, 252, 332
BtgZI GCGATG 2 cut(s) 707, 1442
BtsCI GGATG 1 cut(s) 1093
BtsI GCAGTG 1 cut(s) 1040
BtsIMutI CAGTG 5 cut(s) 120, 781, 1012, 1040, 1260
Cac8I GCNNGC 1 cut(s) 1629
CfoI GCGC 3 cut(s) 561, 1078, 1152
Cfr13I GGNCC 3 cut(s) 1441, 1526, 1696
CseI GACGC 2 cut(s) 675, 1340
Csp6I GTAC 5 cut(s) 586, 1497, 1590, 1673, 1794
CspCI CAANNNNNGTGG 4 cut(s) 613, 648, 1141, 1176
CviQI GTAC 5 cut(s) 586, 1497, 1590, 1673, 1794
DdeI CTNAG 4 cut(s) 129, 198, 536, 744
DpnI GATC 6 cut(s) 300, 474, 780, 1209, 1367, 1680
DpnII GATC 6 cut(s) 298, 472, 778, 1207, 1365, 1678
DraI TTTAAA 1 cut(s) 1476
DriI GACNNNNNGTC 1 cut(s) 607
EaeI YGGCCR 2 cut(s) 172, 330
Eam1105I GACNNNNNGTC 1 cut(s) 607
EciI GGCGGA 1 cut(s) 1078
Eco130I CCWWGG 1 cut(s) 156
Eco47I GGWCC 3 cut(s) 1441, 1526, 1696
Eco57I CTGAAG 1 cut(s) 122
Eco81I CCTNAGG 1 cut(s) 129
Eco88I CYCGRG 1 cut(s) 492
EcoNI CCTNNNNNAGG 2 cut(s) 132, 593
EcoRI GAATTC 1 cut(s) 667
EcoRII CCWGG 2 cut(s) 476, 1368
EcoT14I CCWWGG 1 cut(s) 156
EcoT22I ATGCAT 2 cut(s) 679, 1705
ErhI CCWWGG 1 cut(s) 156
FaqI GGGAC 2 cut(s) 845, 1240
FauNDI CATATG 1 cut(s) 303
FbaI TGATCA 1 cut(s) 298
FblI GTMKAC 1 cut(s) 1175
Fnu4HI GCNGC 6 cut(s) 582, 727, 1128, 1131, 1580, 1602
FokI GGATG 1 cut(s) 1080
Fsp4HI GCNGC 6 cut(s) 582, 727, 1128, 1131, 1580, 1602
FspBI CTAG 1 cut(s) 149
FspI TGCGCA 1 cut(s) 560
GlaI GCGC 3 cut(s) 560, 1077, 1151
GluI GCNGC 6 cut(s) 582, 727, 1128, 1131, 1580, 1602
GsaI CCCAGC 1 cut(s) 1791
HaeIII GGCC 3 cut(s) 174, 252, 332
HapII CCGG 2 cut(s) 1382, 1739
HgaI GACGC 2 cut(s) 675, 1340
HhaI GCGC 3 cut(s) 561, 1078, 1152
Hin1I GRCGYC 1 cut(s) 686
Hin6I GCGC 3 cut(s) 559, 1076, 1150
HinP1I GCGC 3 cut(s) 559, 1076, 1150
HincII GTYRAC 2 cut(s) 690, 1330
HindII GTYRAC 2 cut(s) 690, 1330
HinfI GANTC 7 cut(s) 71, 152, 326, 422, 602, 1613, 1778
HpaII CCGG 2 cut(s) 1382, 1739
HphI GGTGA 4 cut(s) 331, 533, 1055, 1634
Hpy166II GTNNAC 6 cut(s) 186, 690, 937, 1176, 1330, 1696
Hpy188I TCNGA 9 cut(s) 49, 102, 274, 928, 1278, 1618, 1774, 1827, 1835
Hpy188III TCNNGA 2 cut(s) 764, 1808
Hpy8I GTNNAC 6 cut(s) 186, 690, 937, 1176, 1330, 1696
Hpy99I CGWCG 1 cut(s) 667
HpyCH4III ACNGT 6 cut(s) 39, 124, 1007, 1445, 1726, 1831
HpyCH4IV ACGT 1 cut(s) 1420
HpyF10VI GCNNNNNNNGC 5 cut(s) 683, 886, 1331, 1424, 1735
HpyF3I CTNAG 4 cut(s) 129, 198, 536, 744
HpySE526I ACGT 1 cut(s) 1420
Hsp92I GRCGYC 1 cut(s) 686
HspAI GCGC 3 cut(s) 559, 1076, 1150
Ksp22I TGATCA 1 cut(s) 298
Kzo9I GATC 6 cut(s) 298, 472, 778, 1207, 1365, 1678
LmnI GCTCC 2 cut(s) 286, 1278
Lsp1109I GCAGC 6 cut(s) 568, 713, 1139, 1142, 1591, 1613
LweI GCATC 2 cut(s) 1020, 1760
MaeI CTAG 1 cut(s) 149
MaeII ACGT 1 cut(s) 1420
MaeIII GTNAC 4 cut(s) 319, 870, 1223, 1819
MalI GATC 6 cut(s) 300, 474, 780, 1209, 1367, 1680
MboI GATC 6 cut(s) 298, 472, 778, 1207, 1365, 1678
MboII GAAGA 7 cut(s) 115, 494, 610, 1278, 1509, 1643, 1646
MfeI CAATTG 1 cut(s) 1215
MflI RGATCY 1 cut(s) 1365
MhlI GDGCHC 2 cut(s) 743, 1746
MlsI TGGCCA 1 cut(s) 174
MluNI TGGCCA 1 cut(s) 174
MlyI GAGTC 2 cut(s) 416, 596
MmeI TCCRAC 6 cut(s) 1007, 1256, 1419, 1558, 1623, 1806
MnlI CCTC 7 cut(s) 138, 154, 592, 708, 769, 1207, 1710
Mox20I TGGCCA 1 cut(s) 174
Mph1103I ATGCAT 2 cut(s) 679, 1705
MroXI GAANNNNTTC 1 cut(s) 409
MscI TGGCCA 1 cut(s) 174
MseI TTAA 5 cut(s) 93, 372, 1113, 1311, 1475
MslI CAYNNNNRTG 2 cut(s) 702, 1346
Msp20I TGGCCA 1 cut(s) 174
MspI CCGG 2 cut(s) 1382, 1739
MspR9I CCNGG 3 cut(s) 478, 1370, 1740
MunI CAATTG 1 cut(s) 1215
MvaI CCWGG 2 cut(s) 478, 1370
MwoI GCNNNNNNNGC 5 cut(s) 683, 886, 1331, 1424, 1735
NciI CCSGG 1 cut(s) 1740
NdeI CATATG 1 cut(s) 303
NdeII GATC 6 cut(s) 298, 472, 778, 1207, 1365, 1678
NlaIV GGNNCC 1 cut(s) 1280
NmeAIII GCCGAG 1 cut(s) 847
NmuCI GTSAC 3 cut(s) 319, 1223, 1819
NsbI TGCGCA 1 cut(s) 560
NsiI ATGCAT 2 cut(s) 679, 1705
NspI RCATGY 8 cut(s) 677, 1033, 1255, 1345, 1361, 1438, 1487, 1688
NspV TTCGAA 1 cut(s) 116
OliI CACNNNNGTG 1 cut(s) 702
PasI CCCWGGG 1 cut(s) 477
PciI ACATGT 3 cut(s) 1341, 1434, 1483
PdmI GAANNNNTTC 1 cut(s) 409
PfeI GAWTC 5 cut(s) 71, 152, 326, 1613, 1778
PflFI GACNNNGTC 2 cut(s) 922, 1399
PflMI CCANNNNNTGG 1 cut(s) 1705
PfoI TCCNGGA 1 cut(s) 1368
PkrI GCNGC 6 cut(s) 583, 728, 1129, 1132, 1581, 1603
PleI GAGTC 2 cut(s) 416, 596
PpsI GAGTC 2 cut(s) 416, 596
PscI ACATGT 3 cut(s) 1341, 1434, 1483
Psp6I CCWGG 2 cut(s) 476, 1368
PspFI CCCAGC 1 cut(s) 1787
PspGI CCWGG 2 cut(s) 476, 1368
PspN4I GGNNCC 1 cut(s) 1280
PspPI GGNCC 3 cut(s) 1441, 1526, 1696
PstI CTGCAG 3 cut(s) 261, 897, 1759
PsuI RGATCY 1 cut(s) 1365
PsyI GACNNNGTC 2 cut(s) 922, 1399
RsaI GTAC 5 cut(s) 587, 1498, 1591, 1674, 1795
RsaNI GTAC 5 cut(s) 586, 1497, 1590, 1673, 1794
RseI CAYNNNNRTG 2 cut(s) 702, 1346
SaqAI TTAA 5 cut(s) 93, 372, 1113, 1311, 1475
SatI GCNGC 6 cut(s) 582, 727, 1128, 1131, 1580, 1602
Sau3AI GATC 6 cut(s) 298, 472, 778, 1207, 1365, 1678
Sau96I GGNCC 3 cut(s) 1441, 1526, 1696
SchI GAGTC 2 cut(s) 416, 596
ScrFI CCNGG 3 cut(s) 478, 1370, 1740
SduI GDGCHC 2 cut(s) 743, 1746
SfaNI GCATC 2 cut(s) 1020, 1760
SfcI CTRYAG 5 cut(s) 257, 710, 893, 1545, 1755
SfuI TTCGAA 1 cut(s) 116
SinI GGWCC 3 cut(s) 1441, 1526, 1696
SmiI ATTTAAAT 1 cut(s) 1476
SmiMI CAYNNNNRTG 2 cut(s) 702, 1346
SmlI CTYRAG 1 cut(s) 1079
SmoI CTYRAG 1 cut(s) 1079
SsiI CCGC 4 cut(s) 736, 1063, 1285, 1554
SspMI CTAG 1 cut(s) 149
StyD4I CCNGG 3 cut(s) 476, 1368, 1738
StyI CCWWGG 1 cut(s) 156
SwaI ATTTAAAT 1 cut(s) 1476
TaaI ACNGT 6 cut(s) 39, 124, 1007, 1445, 1726, 1831
TaiI ACGT 1 cut(s) 1423
TaqI TCGA 4 cut(s) 116, 665, 807, 1199
TfiI GAWTC 5 cut(s) 71, 152, 326, 1613, 1778
Tru1I TTAA 5 cut(s) 93, 372, 1113, 1311, 1475
Tru9I TTAA 5 cut(s) 93, 372, 1113, 1311, 1475
TscAI CASTG 5 cut(s) 127, 788, 1012, 1040, 1267
TseFI GTSAC 3 cut(s) 319, 1223, 1819
TseI GCWGC 6 cut(s) 581, 726, 1127, 1130, 1579, 1601
Tsp45I GTSAC 3 cut(s) 319, 1223, 1819
TspGWI ACGGA 2 cut(s) 384, 477
TspRI CASTG 5 cut(s) 127, 788, 1012, 1040, 1267
Tth111I GACNNNGTC 2 cut(s) 922, 1399
Van91I CCANNNNNTGG 1 cut(s) 1705
VpaK11BI GGWCC 3 cut(s) 1441, 1526, 1696
XagI CCTNNNNNAGG 2 cut(s) 132, 593
XapI RAATTY 4 cut(s) 267, 437, 667, 1540
XceI RCATGY 8 cut(s) 677, 1033, 1255, 1345, 1361, 1438, 1487, 1688
XmiI GTMKAC 1 cut(s) 1175
XmnI GAANNNNTTC 1 cut(s) 409
XspI CTAG 1 cut(s) 149
Zsp2I ATGCAT 2 cut(s) 679, 1705
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.