PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Peptidase_C48 | PF02902 | 254 - 382 | 4.4e-13 | Ulp1 protease family, C-terminal catalytic domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 2 cut(s) | 445, 1148 |
| AccB1I | GGYRCC | 2 cut(s) | 445, 1148 |
| AciI | CCGC | 3 cut(s) | 93, 102, 1113 |
| AclWI | GGATC | 2 cut(s) | 919, 1008 |
| AcoI | YGGCCR | 1 cut(s) | 811 |
| AfaI | GTAC | 4 cut(s) | 447, 568, 1150, 1169 |
| AflIII | ACRYGT | 1 cut(s) | 750 |
| AhdI | GACNNNNNGTC | 3 cut(s) | 161, 751, 1021 |
| AjiI | CACGTC | 1 cut(s) | 670 |
| AjnI | CCWGG | 1 cut(s) | 856 |
| AluBI | AGCT | 6 cut(s) | 17, 74, 378, 709, 1082, 1268 |
| AluI | AGCT | 6 cut(s) | 17, 74, 378, 709, 1082, 1268 |
| Alw21I | GWGCWC | 3 cut(s) | 380, 469, 940 |
| Alw26I | GTCTC | 4 cut(s) | 179, 738, 1021, 1230 |
| Alw44I | GTGCAC | 2 cut(s) | 465, 936 |
| AlwI | GGATC | 2 cut(s) | 919, 1008 |
| AoxI | GGCC | 2 cut(s) | 544, 811 |
| ApaLI | GTGCAC | 2 cut(s) | 465, 936 |
| ApeKI | GCWGC | 6 cut(s) | 95, 98, 717, 983, 1138, 1160 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 51, 768 |
| Asp718I | GGTACC | 2 cut(s) | 445, 1148 |
| AspA2I | CCTAGG | 1 cut(s) | 449 |
| AspLEI | GCGC | 1 cut(s) | 203 |
| AspS9I | GGNCC | 4 cut(s) | 389, 545, 698, 1085 |
| AsuC2I | CCSGG | 2 cut(s) | 492, 1279 |
| AsuHPI | GGTGA | 3 cut(s) | 47, 334, 341 |
| AsuII | TTCGAA | 1 cut(s) | 55 |
| AvaII | GGWCC | 3 cut(s) | 389, 698, 1085 |
| AvrII | CCTAGG | 1 cut(s) | 449 |
| BaeGI | GKGCMC | 2 cut(s) | 469, 940 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 429, 462 |
| BalI | TGGCCA | 1 cut(s) | 813 |
| BanI | GGYRCC | 2 cut(s) | 445, 1148 |
| BanII | GRGCYC | 1 cut(s) | 380 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 330, 362 |
| BauI | CACGAG | 1 cut(s) | 851 |
| Bbv12I | GWGCWC | 3 cut(s) | 380, 469, 940 |
| BbvI | GCAGC | 6 cut(s) | 82, 85, 729, 995, 1147, 1150 |
| BccI | CCATC | 1 cut(s) | 1070 |
| BceAI | ACGGC | 1 cut(s) | 626 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 443, 477, 1142, 1176 |
| BciT130I | CCWGG | 1 cut(s) | 858 |
| BclI | TGATCA | 1 cut(s) | 310 |
| BcnI | CCSGG | 2 cut(s) | 492, 1279 |
| BcoDI | GTCTC | 4 cut(s) | 179, 738, 1021, 1230 |
| BfaI | CTAG | 2 cut(s) | 75, 450 |
| BfmI | CTRYAG | 2 cut(s) | 634, 918 |
| BisI | GCNGC | 7 cut(s) | 96, 99, 102, 718, 984, 1139, 1161 |
| BlnI | CCTAGG | 1 cut(s) | 449 |
| BlpI | GCTNAGC | 1 cut(s) | 1264 |
| BlsI | GCNGC | 7 cut(s) | 97, 100, 103, 719, 985, 1140, 1162 |
| Bme1390I | CCNGG | 3 cut(s) | 492, 858, 1279 |
| Bme18I | GGWCC | 3 cut(s) | 389, 698, 1085 |
| BmeRI | GACNNNNNGTC | 3 cut(s) | 161, 751, 1021 |
| BmgBI | CACGTC | 1 cut(s) | 670 |
| BmgT120I | GGNCC | 4 cut(s) | 389, 545, 698, 1085 |
| BmiI | GGNNCC | 4 cut(s) | 390, 447, 1057, 1150 |
| BmrFI | CCNGG | 3 cut(s) | 492, 858, 1279 |
| BmsI | GCATC | 6 cut(s) | 529, 865, 964, 1225, 1250, 1281 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1264 |
| Bpu14I | TTCGAA | 1 cut(s) | 55 |
| BpuEI | CTTGAG | 1 cut(s) | 744 |
| BpuMI | CCSGG | 2 cut(s) | 492, 1279 |
| BsaAI | YACGTR | 1 cut(s) | 1167 |
| BsaBI | GATNNNNATC | 1 cut(s) | 839 |
| BsaJI | CCNNGG | 4 cut(s) | 449, 694, 701, 1211 |
| Bse118I | RCCGGY | 1 cut(s) | 542 |
| Bse8I | GATNNNNATC | 1 cut(s) | 839 |
| BseBI | CCWGG | 1 cut(s) | 858 |
| BseDI | CCNNGG | 4 cut(s) | 449, 694, 701, 1211 |
| BseGI | GGATG | 2 cut(s) | 880, 1216 |
| BseJI | GATNNNNATC | 1 cut(s) | 839 |
| BseMII | CTCAG | 1 cut(s) | 51 |
| BseSI | GKGCMC | 2 cut(s) | 469, 940 |
| BseXI | GCAGC | 6 cut(s) | 82, 85, 729, 995, 1147, 1150 |
| BshFI | GGCC | 2 cut(s) | 546, 813 |
| BshNI | GGYRCC | 2 cut(s) | 445, 1148 |
| BsiHKAI | GWGCWC | 3 cut(s) | 380, 469, 940 |
| BsiSI | CCGG | 3 cut(s) | 491, 543, 1278 |
| BslFI | GGGAC | 1 cut(s) | 544 |
| BsmAI | GTCTC | 4 cut(s) | 179, 738, 1021, 1230 |
| BsmFI | GGGAC | 1 cut(s) | 544 |
| BsmI | GAATGC | 1 cut(s) | 669 |
| BsnI | GGCC | 2 cut(s) | 546, 813 |
| Bsp119I | TTCGAA | 1 cut(s) | 55 |
| Bsp1286I | GDGCHC | 3 cut(s) | 380, 469, 940 |
| Bsp143I | GATC | 7 cut(s) | 136, 267, 310, 586, 682, 924, 1000 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1264 |
| BspACI | CCGC | 3 cut(s) | 93, 102, 1113 |
| BspANI | GGCC | 2 cut(s) | 546, 813 |
| BspCNI | CTCAG | 1 cut(s) | 52 |
| BspLI | GGNNCC | 4 cut(s) | 390, 447, 1057, 1150 |
| BspMAI | CTGCAG | 1 cut(s) | 922 |
| BspPI | GGATC | 2 cut(s) | 919, 1008 |
| BspT104I | TTCGAA | 1 cut(s) | 55 |
| BspT107I | GGYRCC | 2 cut(s) | 445, 1148 |
| BsrFI | RCCGGY | 1 cut(s) | 542 |
| BssAI | RCCGGY | 1 cut(s) | 542 |
| BssECI | CCNNGG | 4 cut(s) | 449, 694, 701, 1211 |
| BssMI | GATC | 7 cut(s) | 136, 267, 310, 586, 682, 924, 1000 |
| BssSI | CACGAG | 1 cut(s) | 851 |
| BssT1I | CCWWGG | 3 cut(s) | 449, 701, 1211 |
| Bst2BI | CACGAG | 1 cut(s) | 851 |
| Bst2UI | CCWGG | 1 cut(s) | 858 |
| Bst4CI | ACNGT | 3 cut(s) | 442, 638, 1252 |
| Bst6I | CTCTTC | 1 cut(s) | 473 |
| BstBAI | YACGTR | 1 cut(s) | 1167 |
| BstBI | TTCGAA | 1 cut(s) | 55 |
| BstC8I | GCNNGC | 2 cut(s) | 544, 1270 |
| BstDEI | CTNAG | 5 cut(s) | 60, 573, 722, 788, 1264 |
| BstF5I | GGATG | 2 cut(s) | 880, 1216 |
| BstHHI | GCGC | 1 cut(s) | 203 |
| BstKTI | GATC | 7 cut(s) | 139, 270, 313, 589, 685, 927, 1003 |
| BstMAI | GTCTC | 4 cut(s) | 179, 738, 1021, 1230 |
| BstMBI | GATC | 7 cut(s) | 136, 267, 310, 586, 682, 924, 1000 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 23, 101, 647, 983, 1011, 1269 |
| BstNI | CCWGG | 1 cut(s) | 858 |
| BstNSI | RCATGY | 5 cut(s) | 754, 905, 997, 1034, 1247 |
| BstSCI | CCNGG | 3 cut(s) | 490, 856, 1277 |
| BstSFI | CTRYAG | 2 cut(s) | 634, 918 |
| BstSLI | GKGCMC | 2 cut(s) | 469, 940 |
| BstSNI | TACGTA | 1 cut(s) | 1167 |
| BstV1I | GCAGC | 6 cut(s) | 82, 85, 729, 995, 1147, 1150 |
| BstX2I | RGATCY | 1 cut(s) | 924 |
| BstYI | RGATCY | 1 cut(s) | 924 |
| BsuRI | GGCC | 2 cut(s) | 546, 813 |
| BtrI | CACGTC | 1 cut(s) | 670 |
| BtsCI | GGATG | 2 cut(s) | 880, 1216 |
| BtsIMutI | CAGTG | 3 cut(s) | 378, 643, 1257 |
| Cac8I | GCNNGC | 2 cut(s) | 544, 1270 |
| CfoI | GCGC | 1 cut(s) | 203 |
| Cfr10I | RCCGGY | 1 cut(s) | 542 |
| Cfr13I | GGNCC | 4 cut(s) | 389, 545, 698, 1085 |
| CseI | GACGC | 1 cut(s) | 1025 |
| Csp6I | GTAC | 4 cut(s) | 446, 567, 1149, 1168 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1179, 1214 |
| CviAII | CATG | 7 cut(s) | 166, 265, 751, 902, 994, 1031, 1244 |
| CviQI | GTAC | 4 cut(s) | 446, 567, 1149, 1168 |
| DdeI | CTNAG | 5 cut(s) | 60, 573, 722, 788, 1264 |
| DpnI | GATC | 7 cut(s) | 138, 269, 312, 588, 684, 926, 1002 |
| DpnII | GATC | 7 cut(s) | 136, 267, 310, 586, 682, 924, 1000 |
| DriI | GACNNNNNGTC | 3 cut(s) | 161, 751, 1021 |
| EaeI | YGGCCR | 1 cut(s) | 811 |
| Eam1104I | CTCTTC | 1 cut(s) | 473 |
| Eam1105I | GACNNNNNGTC | 3 cut(s) | 161, 751, 1021 |
| EarI | CTCTTC | 1 cut(s) | 473 |
| Ecl136II | GAGCTC | 1 cut(s) | 378 |
| Eco105I | TACGTA | 1 cut(s) | 1167 |
| Eco130I | CCWWGG | 3 cut(s) | 449, 701, 1211 |
| Eco24I | GRGCYC | 1 cut(s) | 380 |
| Eco47I | GGWCC | 3 cut(s) | 389, 698, 1085 |
| Eco53kI | GAGCTC | 1 cut(s) | 378 |
| EcoICRI | GAGCTC | 1 cut(s) | 378 |
| EcoRII | CCWGG | 1 cut(s) | 856 |
| EcoT14I | CCWWGG | 3 cut(s) | 449, 701, 1211 |
| EcoT38I | GRGCYC | 1 cut(s) | 380 |
| ErhI | CCWWGG | 3 cut(s) | 449, 701, 1211 |
| FaeI | CATG | 7 cut(s) | 169, 268, 754, 905, 997, 1034, 1247 |
| FaqI | GGGAC | 1 cut(s) | 544 |
| FatI | CATG | 7 cut(s) | 165, 264, 750, 901, 993, 1030, 1243 |
| FauNDI | CATATG | 1 cut(s) | 141 |
| FbaI | TGATCA | 1 cut(s) | 310 |
| Fnu4HI | GCNGC | 7 cut(s) | 96, 99, 102, 718, 984, 1139, 1161 |
| FokI | GGATG | 2 cut(s) | 887, 1203 |
| FriOI | GRGCYC | 1 cut(s) | 380 |
| Fsp4HI | GCNGC | 7 cut(s) | 96, 99, 102, 718, 984, 1139, 1161 |
| FspBI | CTAG | 2 cut(s) | 75, 450 |
| GlaI | GCGC | 1 cut(s) | 202 |
| GluI | GCNGC | 7 cut(s) | 96, 99, 102, 718, 984, 1139, 1161 |
| HaeIII | GGCC | 2 cut(s) | 546, 813 |
| HapII | CCGG | 3 cut(s) | 491, 543, 1278 |
| HgaI | GACGC | 1 cut(s) | 1025 |
| HhaI | GCGC | 1 cut(s) | 203 |
| Hin1II | CATG | 7 cut(s) | 169, 268, 754, 905, 997, 1034, 1247 |
| Hin6I | GCGC | 1 cut(s) | 201 |
| HinP1I | GCGC | 1 cut(s) | 201 |
| HincII | GTYRAC | 1 cut(s) | 756 |
| HindII | GTYRAC | 1 cut(s) | 756 |
| HinfI | GANTC | 4 cut(s) | 224, 254, 769, 804 |
| HpaII | CCGG | 3 cut(s) | 491, 543, 1278 |
| HphI | GGTGA | 3 cut(s) | 47, 334, 341 |
| Hpy166II | GTNNAC | 5 cut(s) | 325, 467, 756, 938, 1255 |
| Hpy188I | TCNGA | 6 cut(s) | 155, 364, 908, 1055, 1177, 1221 |
| Hpy188III | TCNNGA | 4 cut(s) | 761, 828, 963, 1026 |
| Hpy8I | GTNNAC | 5 cut(s) | 325, 467, 756, 938, 1255 |
| Hpy99I | CGWCG | 1 cut(s) | 1019 |
| HpyCH4III | ACNGT | 3 cut(s) | 442, 638, 1252 |
| HpyCH4IV | ACGT | 4 cut(s) | 87, 669, 1166, 1186 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 23, 101, 647, 983, 1011, 1269 |
| HpyF3I | CTNAG | 5 cut(s) | 60, 573, 722, 788, 1264 |
| HpySE526I | ACGT | 4 cut(s) | 87, 669, 1166, 1186 |
| Hsp92II | CATG | 7 cut(s) | 169, 268, 754, 905, 997, 1034, 1247 |
| HspAI | GCGC | 1 cut(s) | 201 |
| KpnI | GGTACC | 2 cut(s) | 449, 1152 |
| KroI | GCCGGC | 1 cut(s) | 542 |
| KroNI | GCCGGC | 1 cut(s) | 544 |
| Ksp22I | TGATCA | 1 cut(s) | 310 |
| Kzo9I | GATC | 7 cut(s) | 136, 267, 310, 586, 682, 924, 1000 |
| LmnI | GCTCC | 5 cut(s) | 383, 408, 616, 706, 1079 |
| LpnPI | CCDG | 9 cut(s) | 236, 299, 504, 556, 841, 843, 870, 983, 1068 |
| Lsp1109I | GCAGC | 6 cut(s) | 82, 85, 729, 995, 1147, 1150 |
| LweI | GCATC | 6 cut(s) | 529, 865, 964, 1225, 1250, 1281 |
| MaeI | CTAG | 2 cut(s) | 75, 450 |
| MaeII | ACGT | 4 cut(s) | 87, 669, 1166, 1186 |
| MaeIII | GTNAC | 5 cut(s) | 88, 194, 504, 670, 1246 |
| MalI | GATC | 7 cut(s) | 138, 269, 312, 588, 684, 926, 1002 |
| MboI | GATC | 7 cut(s) | 136, 267, 310, 586, 682, 924, 1000 |
| MboII | GAAGA | 4 cut(s) | 490, 677, 1108, 1234 |
| MflI | RGATCY | 1 cut(s) | 924 |
| MhlI | GDGCHC | 3 cut(s) | 380, 469, 940 |
| MlsI | TGGCCA | 1 cut(s) | 813 |
| MluCI | AATT | 5 cut(s) | 29, 131, 244, 486, 1171 |
| MluNI | TGGCCA | 1 cut(s) | 813 |
| MmeI | TCCRAC | 1 cut(s) | 969 |
| MnlI | CCTC | 6 cut(s) | 100, 214, 379, 704, 1098, 1222 |
| Mox20I | TGGCCA | 1 cut(s) | 813 |
| MroNI | GCCGGC | 1 cut(s) | 542 |
| MroXI | GAANNNNTTC | 2 cut(s) | 51, 768 |
| MscI | TGGCCA | 1 cut(s) | 813 |
| MseI | TTAA | 1 cut(s) | 474 |
| MslI | CAYNNNNRTG | 1 cut(s) | 210 |
| Msp20I | TGGCCA | 1 cut(s) | 813 |
| MspA1I | CMGCKG | 1 cut(s) | 95 |
| MspI | CCGG | 3 cut(s) | 491, 543, 1278 |
| MspR9I | CCNGG | 3 cut(s) | 492, 858, 1279 |
| Mva1269I | GAATGC | 1 cut(s) | 669 |
| MvaI | CCWGG | 1 cut(s) | 858 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 23, 101, 647, 983, 1011, 1269 |
| NaeI | GCCGGC | 1 cut(s) | 544 |
| NciI | CCSGG | 2 cut(s) | 492, 1279 |
| NdeI | CATATG | 1 cut(s) | 141 |
| NdeII | GATC | 7 cut(s) | 136, 267, 310, 586, 682, 924, 1000 |
| NgoMIV | GCCGGC | 1 cut(s) | 542 |
| NlaIII | CATG | 7 cut(s) | 169, 268, 754, 905, 997, 1034, 1247 |
| NlaIV | GGNNCC | 4 cut(s) | 390, 447, 1057, 1150 |
| NmuCI | GTSAC | 4 cut(s) | 88, 504, 670, 1246 |
| NspI | RCATGY | 5 cut(s) | 754, 905, 997, 1034, 1247 |
| NspV | TTCGAA | 1 cut(s) | 55 |
| PciI | ACATGT | 1 cut(s) | 750 |
| PctI | GAATGC | 1 cut(s) | 669 |
| PdiI | GCCGGC | 1 cut(s) | 544 |
| PdmI | GAANNNNTTC | 2 cut(s) | 51, 768 |
| PfeI | GAWTC | 4 cut(s) | 224, 254, 769, 804 |
| PfoI | TCCNGGA | 1 cut(s) | 1277 |
| PkrI | GCNGC | 7 cut(s) | 97, 100, 103, 719, 985, 1140, 1162 |
| Ppu21I | YACGTR | 1 cut(s) | 1167 |
| PscI | ACATGT | 1 cut(s) | 750 |
| Psp124BI | GAGCTC | 1 cut(s) | 380 |
| Psp6I | CCWGG | 1 cut(s) | 856 |
| PspGI | CCWGG | 1 cut(s) | 856 |
| PspN4I | GGNNCC | 4 cut(s) | 390, 447, 1057, 1150 |
| PspPI | GGNCC | 4 cut(s) | 389, 545, 698, 1085 |
| PstI | CTGCAG | 1 cut(s) | 922 |
| PsuI | RGATCY | 1 cut(s) | 924 |
| RsaI | GTAC | 4 cut(s) | 447, 568, 1150, 1169 |
| RsaNI | GTAC | 4 cut(s) | 446, 567, 1149, 1168 |
| RseI | CAYNNNNRTG | 1 cut(s) | 210 |
| SacI | GAGCTC | 1 cut(s) | 380 |
| SaqAI | TTAA | 1 cut(s) | 474 |
| SatI | GCNGC | 7 cut(s) | 96, 99, 102, 718, 984, 1139, 1161 |
| Sau3AI | GATC | 7 cut(s) | 136, 267, 310, 586, 682, 924, 1000 |
| Sau96I | GGNCC | 4 cut(s) | 389, 545, 698, 1085 |
| ScrFI | CCNGG | 3 cut(s) | 492, 858, 1279 |
| SduI | GDGCHC | 3 cut(s) | 380, 469, 940 |
| SfaNI | GCATC | 6 cut(s) | 529, 865, 964, 1225, 1250, 1281 |
| SfcI | CTRYAG | 2 cut(s) | 634, 918 |
| SfuI | TTCGAA | 1 cut(s) | 55 |
| SinI | GGWCC | 3 cut(s) | 389, 698, 1085 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 210 |
| SmlI | CTYRAG | 1 cut(s) | 759 |
| SmoI | CTYRAG | 1 cut(s) | 759 |
| SnaBI | TACGTA | 1 cut(s) | 1167 |
| Sse9I | AATT | 5 cut(s) | 29, 131, 244, 486, 1171 |
| SsiI | CCGC | 3 cut(s) | 93, 102, 1113 |
| SspMI | CTAG | 2 cut(s) | 75, 450 |
| SstI | GAGCTC | 1 cut(s) | 380 |
| StyD4I | CCNGG | 3 cut(s) | 490, 856, 1277 |
| StyI | CCWWGG | 3 cut(s) | 449, 701, 1211 |
| TaaI | ACNGT | 3 cut(s) | 442, 638, 1252 |
| TaiI | ACGT | 4 cut(s) | 90, 672, 1169, 1189 |
| TaqI | TCGA | 5 cut(s) | 55, 657, 1025, 1090, 1203 |
| TaqII | GACCGA | 1 cut(s) | 686 |
| TasI | AATT | 5 cut(s) | 29, 131, 244, 486, 1171 |
| TauI | GCSGC | 1 cut(s) | 104 |
| TfiI | GAWTC | 4 cut(s) | 224, 254, 769, 804 |
| Tru1I | TTAA | 1 cut(s) | 474 |
| Tru9I | TTAA | 1 cut(s) | 474 |
| TscAI | CASTG | 3 cut(s) | 378, 643, 1257 |
| TseFI | GTSAC | 4 cut(s) | 88, 504, 670, 1246 |
| TseI | GCWGC | 6 cut(s) | 95, 98, 717, 983, 1138, 1160 |
| Tsp45I | GTSAC | 4 cut(s) | 88, 504, 670, 1246 |
| TspDTI | ATGAA | 3 cut(s) | 17, 749, 796 |
| TspRI | CASTG | 3 cut(s) | 378, 643, 1257 |
| VneI | GTGCAC | 2 cut(s) | 465, 936 |
| VpaK11BI | GGWCC | 3 cut(s) | 389, 698, 1085 |
| XceI | RCATGY | 5 cut(s) | 754, 905, 997, 1034, 1247 |
| XmaJI | CCTAGG | 1 cut(s) | 449 |
| XmnI | GAANNNNTTC | 2 cut(s) | 51, 768 |
| XspI | CTAG | 2 cut(s) | 75, 450 |