protein desumoylation
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Peptidase_C48 | PF02902 | 336 - 454 | 1e-10 | Ulp1 protease family, C-terminal catalytic domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 833 |
| Acc36I | ACCTGC | 1 cut(s) | 1077 |
| AccB1I | GGYRCC | 1 cut(s) | 1598 |
| AccI | GTMKAC | 1 cut(s) | 892 |
| AccII | CGCG | 1 cut(s) | 1544 |
| AccIII | TCCGGA | 1 cut(s) | 227 |
| AclI | AACGTT | 1 cut(s) | 643 |
| AclWI | GGATC | 2 cut(s) | 104, 1103 |
| AcoI | YGGCCR | 2 cut(s) | 1239, 1712 |
| AcsI | RAATTY | 4 cut(s) | 179, 223, 767, 788 |
| AcuI | CTGAAG | 2 cut(s) | 159, 695 |
| AfaI | GTAC | 3 cut(s) | 261, 955, 1710 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 70, 227, 234, 780 |
| AflIII | ACRYGT | 1 cut(s) | 963 |
| AgsI | TTSAA | 2 cut(s) | 1559, 1625 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1321 |
| AjnI | CCWGG | 1 cut(s) | 1319 |
| AluBI | AGCT | 5 cut(s) | 302, 463, 1101, 1437, 1628 |
| AluI | AGCT | 5 cut(s) | 302, 463, 1101, 1437, 1628 |
| Alw21I | GWGCWC | 1 cut(s) | 746 |
| Alw26I | GTCTC | 1 cut(s) | 1717 |
| AlwI | GGATC | 2 cut(s) | 104, 1103 |
| Aor13HI | TCCGGA | 1 cut(s) | 227 |
| AoxI | GGCC | 5 cut(s) | 189, 1239, 1246, 1572, 1712 |
| ApaI | GGGCCC | 1 cut(s) | 1576 |
| ApeKI | GCWGC | 3 cut(s) | 596, 1303, 1418 |
| ApoI | RAATTY | 4 cut(s) | 179, 223, 767, 788 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 84, 116, 200, 232 |
| AseI | ATTAAT | 1 cut(s) | 485 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1013 |
| AspLEI | GCGC | 1 cut(s) | 137 |
| AspS9I | GGNCC | 3 cut(s) | 1572, 1573, 1698 |
| AsuC2I | CCSGG | 1 cut(s) | 1387 |
| AsuHPI | GGTGA | 9 cut(s) | 210, 485, 490, 511, 557, 676, 740, 776, 795 |
| AvaII | GGWCC | 1 cut(s) | 1698 |
| BaeGI | GKGCMC | 1 cut(s) | 1576 |
| BanI | GGYRCC | 1 cut(s) | 1598 |
| BanII | GRGCYC | 1 cut(s) | 1576 |
| BauI | CACGAG | 1 cut(s) | 1143 |
| BbsI | GAAGAC | 1 cut(s) | 986 |
| Bbv12I | GWGCWC | 1 cut(s) | 746 |
| BbvI | GCAGC | 3 cut(s) | 608, 1315, 1405 |
| BccI | CCATC | 5 cut(s) | 76, 608, 778, 1228, 1773 |
| BceAI | ACGGC | 3 cut(s) | 758, 883, 1727 |
| BciT130I | CCWGG | 1 cut(s) | 1321 |
| BclI | TGATCA | 1 cut(s) | 1042 |
| BcnI | CCSGG | 1 cut(s) | 1387 |
| BcoDI | GTCTC | 1 cut(s) | 1717 |
| BfaI | CTAG | 4 cut(s) | 156, 780, 1125, 1671 |
| BfmI | CTRYAG | 3 cut(s) | 896, 1419, 1438 |
| BfoI | RGCGCY | 1 cut(s) | 138 |
| BfuAI | ACCTGC | 1 cut(s) | 1077 |
| Bme1390I | CCNGG | 2 cut(s) | 1321, 1387 |
| Bme18I | GGWCC | 1 cut(s) | 1698 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1321 |
| BmgT120I | GGNCC | 3 cut(s) | 1572, 1573, 1698 |
| BmiI | GGNNCC | 5 cut(s) | 279, 704, 1574, 1600, 1699 |
| BmrFI | CCNGG | 2 cut(s) | 1321, 1387 |
| BmrI | ACTGGG | 1 cut(s) | 751 |
| BmsI | GCATC | 4 cut(s) | 583, 902, 1444, 1482 |
| BmuI | ACTGGG | 1 cut(s) | 751 |
| BoxI | GACNNNNGTC | 1 cut(s) | 888 |
| BpiI | GAAGAC | 1 cut(s) | 986 |
| Bpu10I | CCTNAGC | 1 cut(s) | 464 |
| BpuMI | CCSGG | 1 cut(s) | 1387 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1016, 1101, 1559 |
| BsaJI | CCNNGG | 7 cut(s) | 192, 886, 1319, 1385, 1542, 1576, 1664 |
| BsaWI | WCCGGW | 1 cut(s) | 227 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 269, 299, 515, 545, 1120, 1150, 1492, 1522 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 70, 227, 234, 780 |
| Bse1I | ACTGG | 2 cut(s) | 757, 1062 |
| Bse3DI | GCAATG | 2 cut(s) | 922, 1475 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1016, 1101, 1559 |
| BseAI | TCCGGA | 1 cut(s) | 227 |
| BseBI | CCWGG | 1 cut(s) | 1321 |
| BseDI | CCNNGG | 7 cut(s) | 192, 886, 1319, 1385, 1542, 1576, 1664 |
| BseGI | GGATG | 8 cut(s) | 352, 789, 862, 1017, 1045, 1220, 1473, 1784 |
| BseJI | GATNNNNATC | 3 cut(s) | 1016, 1101, 1559 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 70, 227, 234, 780 |
| BseMI | GCAATG | 2 cut(s) | 922, 1475 |
| BseMII | CTCAG | 3 cut(s) | 296, 1242, 1332 |
| BseNI | ACTGG | 2 cut(s) | 757, 1062 |
| BseRI | GAGGAG | 1 cut(s) | 141 |
| BseSI | GKGCMC | 1 cut(s) | 1576 |
| BseX3I | CGGCCG | 1 cut(s) | 1712 |
| BseXI | GCAGC | 3 cut(s) | 608, 1315, 1405 |
| BsgI | GTGCAG | 1 cut(s) | 1713 |
| Bsh1236I | CGCG | 1 cut(s) | 1544 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1715 |
| BshFI | GGCC | 5 cut(s) | 191, 1241, 1248, 1574, 1714 |
| BshNI | GGYRCC | 1 cut(s) | 1598 |
| BsiEI | CGRYCG | 1 cut(s) | 1715 |
| BsiHKAI | GWGCWC | 1 cut(s) | 746 |
| BsiSI | CCGG | 6 cut(s) | 228, 1387, 1532, 1679, 1715, 1744 |
| BslFI | GGGAC | 2 cut(s) | 251, 1368 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 70, 227, 234, 780 |
| BsmAI | GTCTC | 1 cut(s) | 1717 |
| BsmFI | GGGAC | 2 cut(s) | 251, 1368 |
| BsmI | GAATGC | 2 cut(s) | 379, 691 |
| BsnI | GGCC | 5 cut(s) | 191, 1241, 1248, 1574, 1714 |
| Bsp120I | GGGCCC | 1 cut(s) | 1572 |
| Bsp1286I | GDGCHC | 2 cut(s) | 746, 1576 |
| Bsp13I | TCCGGA | 1 cut(s) | 227 |
| Bsp143I | GATC | 4 cut(s) | 109, 691, 1042, 1108 |
| BspANI | GGCC | 5 cut(s) | 191, 1241, 1248, 1574, 1714 |
| BspCNI | CTCAG | 3 cut(s) | 295, 1241, 1333 |
| BspEI | TCCGGA | 1 cut(s) | 227 |
| BspFNI | CGCG | 1 cut(s) | 1544 |
| BspLI | GGNNCC | 5 cut(s) | 279, 704, 1574, 1600, 1699 |
| BspMAI | CTGCAG | 1 cut(s) | 1423 |
| BspMI | ACCTGC | 1 cut(s) | 1077 |
| BspPI | GGATC | 2 cut(s) | 104, 1103 |
| BspQI | GCTCTTC | 2 cut(s) | 292, 915 |
| BspT107I | GGYRCC | 1 cut(s) | 1598 |
| BsrDI | GCAATG | 2 cut(s) | 922, 1475 |
| BsrI | ACTGG | 2 cut(s) | 757, 1062 |
| BssECI | CCNNGG | 7 cut(s) | 192, 886, 1319, 1385, 1542, 1576, 1664 |
| BssMI | GATC | 4 cut(s) | 109, 691, 1042, 1108 |
| BssSI | CACGAG | 1 cut(s) | 1143 |
| BssT1I | CCWWGG | 4 cut(s) | 192, 886, 1576, 1664 |
| Bst2BI | CACGAG | 1 cut(s) | 1143 |
| Bst2UI | CCWGG | 1 cut(s) | 1321 |
| Bst4CI | ACNGT | 3 cut(s) | 268, 958, 1034 |
| Bst6I | CTCTTC | 6 cut(s) | 194, 292, 671, 726, 915, 1515 |
| BstC8I | GCNNGC | 3 cut(s) | 971, 1250, 1768 |
| BstDEI | CTNAG | 4 cut(s) | 282, 464, 1228, 1341 |
| BstDSI | CCRYGG | 1 cut(s) | 1542 |
| BstEII | GGTNACC | 2 cut(s) | 216, 1508 |
| BstF5I | GGATG | 8 cut(s) | 352, 789, 862, 1017, 1045, 1220, 1473, 1784 |
| BstFNI | CGCG | 1 cut(s) | 1544 |
| BstH2I | RGCGCY | 1 cut(s) | 138 |
| BstHHI | GCGC | 1 cut(s) | 137 |
| BstKTI | GATC | 4 cut(s) | 112, 694, 1045, 1111 |
| BstMAI | GTCTC | 1 cut(s) | 1717 |
| BstMBI | GATC | 4 cut(s) | 109, 691, 1042, 1108 |
| BstMCI | CGRYCG | 1 cut(s) | 1715 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 1303, 1427, 1541, 1753 |
| BstNI | CCWGG | 1 cut(s) | 1321 |
| BstNSI | RCATGY | 2 cut(s) | 967, 1303 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 888 |
| BstPI | GGTNACC | 2 cut(s) | 216, 1508 |
| BstSCI | CCNGG | 2 cut(s) | 1319, 1385 |
| BstSFI | CTRYAG | 3 cut(s) | 896, 1419, 1438 |
| BstSLI | GKGCMC | 1 cut(s) | 1576 |
| BstUI | CGCG | 1 cut(s) | 1544 |
| BstV1I | GCAGC | 3 cut(s) | 608, 1315, 1405 |
| BstV2I | GAAGAC | 1 cut(s) | 986 |
| BstZI | CGGCCG | 1 cut(s) | 1712 |
| BsuRI | GGCC | 5 cut(s) | 191, 1241, 1248, 1574, 1714 |
| BtgI | CCRYGG | 1 cut(s) | 1542 |
| BtgZI | GCGATG | 1 cut(s) | 1215 |
| BtsCI | GGATG | 8 cut(s) | 352, 789, 862, 1017, 1045, 1220, 1473, 1784 |
| BtsI | GCAGTG | 1 cut(s) | 1022 |
| BtsIMutI | CAGTG | 4 cut(s) | 290, 800, 1022, 1236 |
| BveI | ACCTGC | 1 cut(s) | 1077 |
| Cac8I | GCNNGC | 3 cut(s) | 971, 1250, 1768 |
| CfoI | GCGC | 1 cut(s) | 137 |
| Cfr13I | GGNCC | 3 cut(s) | 1572, 1573, 1698 |
| Cfr42I | CCGCGG | 1 cut(s) | 1545 |
| Csp6I | GTAC | 3 cut(s) | 260, 954, 1709 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1101, 1136 |
| CviQI | GTAC | 3 cut(s) | 260, 954, 1709 |
| DdeI | CTNAG | 4 cut(s) | 282, 464, 1228, 1341 |
| DpnI | GATC | 4 cut(s) | 111, 693, 1044, 1110 |
| DpnII | GATC | 4 cut(s) | 109, 691, 1042, 1108 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1321 |
| EaeI | YGGCCR | 2 cut(s) | 1239, 1712 |
| EagI | CGGCCG | 1 cut(s) | 1712 |
| Eam1104I | CTCTTC | 6 cut(s) | 194, 292, 671, 726, 915, 1515 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1321 |
| EarI | CTCTTC | 6 cut(s) | 194, 292, 671, 726, 915, 1515 |
| EciI | GGCGGA | 2 cut(s) | 1445, 1550 |
| EclXI | CGGCCG | 1 cut(s) | 1712 |
| Eco130I | CCWWGG | 4 cut(s) | 192, 886, 1576, 1664 |
| Eco24I | GRGCYC | 1 cut(s) | 1576 |
| Eco32I | GATATC | 1 cut(s) | 1445 |
| Eco47I | GGWCC | 1 cut(s) | 1698 |
| Eco52I | CGGCCG | 1 cut(s) | 1712 |
| Eco57I | CTGAAG | 2 cut(s) | 159, 695 |
| Eco91I | GGTNACC | 2 cut(s) | 216, 1508 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1573, 1698 |
| EcoO65I | GGTNACC | 2 cut(s) | 216, 1508 |
| EcoRI | GAATTC | 1 cut(s) | 223 |
| EcoRII | CCWGG | 1 cut(s) | 1319 |
| EcoRV | GATATC | 1 cut(s) | 1445 |
| EcoT14I | CCWWGG | 4 cut(s) | 192, 886, 1576, 1664 |
| EcoT22I | ATGCAT | 1 cut(s) | 1475 |
| EcoT38I | GRGCYC | 1 cut(s) | 1576 |
| ErhI | CCWWGG | 4 cut(s) | 192, 886, 1576, 1664 |
| FaqI | GGGAC | 2 cut(s) | 251, 1368 |
| FauI | CCCGC | 1 cut(s) | 962 |
| FbaI | TGATCA | 1 cut(s) | 1042 |
| FblI | GTMKAC | 1 cut(s) | 892 |
| FokI | GGATG | 7 cut(s) | 359, 796, 869, 1004, 1052, 1207, 1460 |
| FriOI | GRGCYC | 1 cut(s) | 1576 |
| FspBI | CTAG | 4 cut(s) | 156, 780, 1125, 1671 |
| GlaI | GCGC | 1 cut(s) | 136 |
| HaeII | RGCGCY | 1 cut(s) | 138 |
| HaeIII | GGCC | 5 cut(s) | 191, 1241, 1248, 1574, 1714 |
| HapII | CCGG | 6 cut(s) | 228, 1387, 1532, 1679, 1715, 1744 |
| HhaI | GCGC | 1 cut(s) | 137 |
| Hin6I | GCGC | 1 cut(s) | 135 |
| HinP1I | GCGC | 1 cut(s) | 135 |
| HincII | GTYRAC | 2 cut(s) | 961, 1315 |
| HindII | GTYRAC | 2 cut(s) | 961, 1315 |
| HinfI | GANTC | 6 cut(s) | 452, 872, 1354, 1538, 1604, 1675 |
| HpaII | CCGG | 6 cut(s) | 228, 1387, 1532, 1679, 1715, 1744 |
| HphI | GGTGA | 9 cut(s) | 210, 485, 490, 511, 557, 676, 740, 776, 795 |
| Hpy166II | GTNNAC | 4 cut(s) | 893, 961, 1234, 1315 |
| Hpy188I | TCNGA | 8 cut(s) | 73, 88, 114, 442, 580, 1342, 1554, 1565 |
| Hpy188III | TCNNGA | 5 cut(s) | 228, 271, 1106, 1448, 1730 |
| Hpy8I | GTNNAC | 4 cut(s) | 893, 961, 1234, 1315 |
| Hpy99I | CGWCG | 2 cut(s) | 993, 1404 |
| HpyAV | CCTTC | 6 cut(s) | 137, 310, 437, 1234, 1238, 1711 |
| HpyCH4III | ACNGT | 3 cut(s) | 268, 958, 1034 |
| HpyCH4IV | ACGT | 3 cut(s) | 240, 643, 1690 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 1303, 1427, 1541, 1753 |
| HpyF3I | CTNAG | 4 cut(s) | 282, 464, 1228, 1341 |
| HpySE526I | ACGT | 3 cut(s) | 240, 643, 1690 |
| HspAI | GCGC | 1 cut(s) | 135 |
| Kpn2I | TCCGGA | 1 cut(s) | 227 |
| Ksp22I | TGATCA | 1 cut(s) | 1042 |
| KspI | CCGCGG | 1 cut(s) | 1545 |
| Kzo9I | GATC | 4 cut(s) | 109, 691, 1042, 1108 |
| LguI | GCTCTTC | 2 cut(s) | 292, 915 |
| LmnI | GCTCC | 3 cut(s) | 277, 523, 741 |
| Lsp1109I | GCAGC | 3 cut(s) | 608, 1315, 1405 |
| LweI | GCATC | 4 cut(s) | 583, 902, 1444, 1482 |
| MaeI | CTAG | 4 cut(s) | 156, 780, 1125, 1671 |
| MaeII | ACGT | 3 cut(s) | 240, 643, 1690 |
| MaeIII | GTNAC | 4 cut(s) | 216, 499, 775, 1508 |
| MalI | GATC | 4 cut(s) | 111, 693, 1044, 1110 |
| MboI | GATC | 4 cut(s) | 109, 691, 1042, 1108 |
| MhlI | GDGCHC | 2 cut(s) | 746, 1576 |
| MlyI | GAGTC | 3 cut(s) | 461, 1547, 1598 |
| MmeI | TCCRAC | 1 cut(s) | 513 |
| Mph1103I | ATGCAT | 1 cut(s) | 1475 |
| MroI | TCCGGA | 1 cut(s) | 227 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1013 |
| MseI | TTAA | 6 cut(s) | 9, 312, 485, 615, 639, 1481 |
| MslI | CAYNNNNRTG | 4 cut(s) | 782, 1032, 1090, 1401 |
| MspA1I | CMGCKG | 2 cut(s) | 22, 1544 |
| MspI | CCGG | 6 cut(s) | 228, 1387, 1532, 1679, 1715, 1744 |
| MspR9I | CCNGG | 2 cut(s) | 1321, 1387 |
| Mva1269I | GAATGC | 2 cut(s) | 379, 691 |
| MvaI | CCWGG | 1 cut(s) | 1321 |
| MvnI | CGCG | 1 cut(s) | 1544 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 1303, 1427, 1541, 1753 |
| NciI | CCSGG | 1 cut(s) | 1387 |
| NdeII | GATC | 4 cut(s) | 109, 691, 1042, 1108 |
| NlaIV | GGNNCC | 5 cut(s) | 279, 704, 1574, 1600, 1699 |
| NmuCI | GTSAC | 3 cut(s) | 216, 499, 775 |
| NsiI | ATGCAT | 1 cut(s) | 1475 |
| NspI | RCATGY | 2 cut(s) | 967, 1303 |
| PciI | ACATGT | 1 cut(s) | 963 |
| PciSI | GCTCTTC | 2 cut(s) | 292, 915 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 218 |
| PctI | GAATGC | 2 cut(s) | 379, 691 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1013 |
| PfeI | GAWTC | 3 cut(s) | 872, 1354, 1675 |
| PleI | GAGTC | 3 cut(s) | 460, 1546, 1598 |
| PpsI | GAGTC | 3 cut(s) | 460, 1546, 1598 |
| PpuMI | RGGWCCY | 1 cut(s) | 1698 |
| PscI | ACATGT | 1 cut(s) | 963 |
| PshAI | GACNNNNGTC | 1 cut(s) | 888 |
| PshBI | ATTAAT | 1 cut(s) | 485 |
| PsiI | TTATAA | 1 cut(s) | 833 |
| Psp1406I | AACGTT | 1 cut(s) | 643 |
| Psp5II | RGGWCCY | 1 cut(s) | 1698 |
| Psp6I | CCWGG | 1 cut(s) | 1319 |
| PspEI | GGTNACC | 2 cut(s) | 216, 1508 |
| PspGI | CCWGG | 1 cut(s) | 1319 |
| PspN4I | GGNNCC | 5 cut(s) | 279, 704, 1574, 1600, 1699 |
| PspOMI | GGGCCC | 1 cut(s) | 1572 |
| PspPI | GGNCC | 3 cut(s) | 1572, 1573, 1698 |
| PspPPI | RGGWCCY | 1 cut(s) | 1698 |
| PstI | CTGCAG | 1 cut(s) | 1423 |
| RsaI | GTAC | 3 cut(s) | 261, 955, 1710 |
| RsaNI | GTAC | 3 cut(s) | 260, 954, 1709 |
| RseI | CAYNNNNRTG | 4 cut(s) | 782, 1032, 1090, 1401 |
| SacII | CCGCGG | 1 cut(s) | 1545 |
| SapI | GCTCTTC | 2 cut(s) | 292, 915 |
| SaqAI | TTAA | 6 cut(s) | 9, 312, 485, 615, 639, 1481 |
| Sau3AI | GATC | 4 cut(s) | 109, 691, 1042, 1108 |
| Sau96I | GGNCC | 3 cut(s) | 1572, 1573, 1698 |
| SchI | GAGTC | 3 cut(s) | 461, 1547, 1598 |
| ScrFI | CCNGG | 2 cut(s) | 1321, 1387 |
| SduI | GDGCHC | 2 cut(s) | 746, 1576 |
| SfaNI | GCATC | 4 cut(s) | 583, 902, 1444, 1482 |
| SfcI | CTRYAG | 3 cut(s) | 896, 1419, 1438 |
| Sfr303I | CCGCGG | 1 cut(s) | 1545 |
| SgrBI | CCGCGG | 1 cut(s) | 1545 |
| SinI | GGWCC | 1 cut(s) | 1698 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 782, 1032, 1090, 1401 |
| SspI | AATATT | 3 cut(s) | 610, 838, 1284 |
| SspMI | CTAG | 4 cut(s) | 156, 780, 1125, 1671 |
| StyD4I | CCNGG | 2 cut(s) | 1319, 1385 |
| StyI | CCWWGG | 4 cut(s) | 192, 886, 1576, 1664 |
| TaaI | ACNGT | 3 cut(s) | 268, 958, 1034 |
| TaiI | ACGT | 3 cut(s) | 243, 646, 1693 |
| TaqI | TCGA | 8 cut(s) | 108, 206, 212, 564, 603, 1007, 1635, 1704 |
| TauI | GCSGC | 7 cut(s) | 135, 559, 673, 848, 1547, 1550, 1773 |
| TfiI | GAWTC | 3 cut(s) | 872, 1354, 1675 |
| Tru1I | TTAA | 6 cut(s) | 9, 312, 485, 615, 639, 1481 |
| Tru9I | TTAA | 6 cut(s) | 9, 312, 485, 615, 639, 1481 |
| TscAI | CASTG | 4 cut(s) | 290, 800, 1029, 1236 |
| TseFI | GTSAC | 3 cut(s) | 216, 499, 775 |
| TseI | GCWGC | 3 cut(s) | 596, 1303, 1418 |
| Tsp45I | GTSAC | 3 cut(s) | 216, 499, 775 |
| TspGWI | ACGGA | 3 cut(s) | 166, 290, 1669 |
| TspRI | CASTG | 4 cut(s) | 290, 800, 1029, 1236 |
| VpaK11BI | GGWCC | 1 cut(s) | 1698 |
| VspI | ATTAAT | 1 cut(s) | 485 |
| XapI | RAATTY | 4 cut(s) | 179, 223, 767, 788 |
| XceI | RCATGY | 2 cut(s) | 967, 1303 |
| XmiI | GTMKAC | 1 cut(s) | 892 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1013 |
| XspI | CTAG | 4 cut(s) | 156, 780, 1125, 1671 |
| Zsp2I | ATGCAT | 1 cut(s) | 1475 |