Rh7DG353400

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0000030
Physical Location & Seq
Reverse (-)
47059248 .. 47062373
3126 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG353400.1

Sequence Viewer

Length: 2115 bp
ATGAAAAACCAAGTTGCAATATTATTTCAAGAGATAGGTTGTTCCCTTGAAGCTGAGGTTGGACATGATAATGGATGTGATAATTTGGATGAGTGTGAAGCGAGAACTGAAGATTGTCTGGTCAGTCCTACAGTAGGTCGACGCATGAGGGAATTTAGAGCAATATGTACTGGTTTGTCAGAAGAGAAGCAAATAGCAATTGATGCTACCGGTTTTGGGGCTACATACACGTTCAGGTGCAGCGAACTGAATGTCCGTCTATGCCACATGATGTGCAATAACTTTGATGTCGAAAACTCAACAATCAAGATTCACGGGAGACATTTAACGGTTACCCCTGAAGACTTCCGTCATGTAATGAGTCTAAGGGATGGTGGGGCAGACGTAGATATAAGTGGAAGCTTGGATGCACCTGACATTATAGAGTTGAAGGCTAAATTTGGTGGTGTTGACGAGGAAATAAGCTTGGATGTTGTGGGGAAGATGGTGGTGCAATCAGAAAATGCTGATGATACATTTATAATCAGTTTCTGTCTGTATGCCCTGTCAACTATTATTATGCCAACTGAAAGTGATGCAGTGGATCCCAGGCTACTTATCGCTATAAAGGATCCAAAAACAATTAGCACAAAAAATTGGGCGTCCTTTGCAGTTAGAAATCTTATTGATGGACTTAGAAGGTATAAGAATGGGGCGGCATCAACGGTCTATGGGTGTATTGCATTTTTGCAGCTGTTCTATTTGGATACAATACTAATGAAGTTGTTTGTTGTTCCGACGTACACATCACCGGTACTATGTTGGAATAACAAGCAGGCAAGAATAATGTACGACCAGGCAGAGGCTAATGGGGGTTGTTACTCGACTGGTATAATAGCGACGAAACGTTGGTCAACAACTCGATTCCTTGATAATGCCGGATCTGTTGATGCCAGTACAGGGCTGAAAACAACAATTGTTGAAGATCTAGATAAGGTTAGGAGCGATGTTGAAGGTTTCAAAAGCGAATTTGAGGAGGTTAGATCTTGCATATCGCATATAGAACCGGACATGGTCGGCCTCCGCAATGCTATTATGACACTACAGACATGTATTACTGAAATGAGGGACGAAGGGATTAATAACATGGTTGTCGAAGTGATGAAGGAAGTCTTTGATGAGGAGGGTCCAATTGGGCACAGAGAGGGGGATGAATGTGATATGTTTGAAGATGACATAGTTATCCGTAAGGCGGGATCGTCAAGTGTTGTTGGGCCTCATCAGCCTAATAAGTTTGATATTGAGGACAAAAGCGCGTCATTGAAGCGAAAGTCAGAAAACAGTGCTGATGATGAAAACAGGATGCTGAAATTATGTGGAGTTGCTGATATATCCAATAGGAGGTTGCAAGGTATGGCGATCATAGTATCTCTCGATGGGACCTATGTTGCCTATCACCGATGCAGCCTATCACAAGCGAGATTGTTGACATATCAGTTTCATACCTGTTTGAAAAAACAAGCAACAGTTGGTTCATGCCCACTTATTTTTCAGAACGGGCTAAGGATTACGGAAGTGGTAGTGTTGTGGATGATATTTTTCCCCCTCCATGACGGTGTTGTGGACAAATGGATCTTAGTGGTTTTGAACCTCGATGTGGGAGAATGTGAGATTTGGGACAGCTGCCCAGACATTGATGGCAGACAGCGTCAGGAGTCTTATGCAAATGTTATTGTGGAGCTCTTTCAGAAGGTGTTTTGTAATGCAATTAGATCGTTGCCGGCATTGTATGCAAGACTAGCCTCAGTGTCCACAGTGTATCCAAAAGAAGCCGCGACCAACCCAAACATTGAGGATTCTAGTATATTTTTAATCAAGAACATGCAGTATTACCGGAAACGCTGGTTCGAACCGTTCAACTCAACCGACCAGAGGATCCGTCTTGCCCTTGACATAGTCAATCACCCAATGAATGCAGTCCGTGTTTTTGTATGGGCAGCAGTTGCTCAGGAAACTCCAATTCACGCTACCTCACTTGGACGTGCAGCGTACAACGGGAATCTCCTCTCTAATTTCCATATCCCACTTGATATTTCAGGAATCAAATTTAAGGCACGCTACACTGCGAGGCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

704

Amino Acids

78.86

Weight (kDa)

5.28

Isoelectric Point (pI)

43.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_C48 PF02902 525 - 627 8e-06 Ulp1 protease family, C-terminal catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 521
AccI GTMKAC 1 cut(s) 139
AccII CGCG 2 cut(s) 1295, 1814
AciI CCGC 4 cut(s) 695, 1063, 1232, 1812
AclI AACGTT 1 cut(s) 886
AclWI GGATC 9 cut(s) 578, 591, 605, 618, 928, 1243, 1619, 1909, 1922
AcsI RAATTY 4 cut(s) 152, 437, 1007, 2084
AcuI CTGAAG 2 cut(s) 129, 360
AcyI GRCGYC 1 cut(s) 641
AfaI GTAC 6 cut(s) 169, 782, 795, 830, 937, 2030
AfiI CCNNNNNNNGG 8 cut(s) 134, 216, 841, 939, 1231, 1380, 1636, 1911
AflIII ACRYGT 2 cut(s) 228, 1088
AgeI ACCGGT 2 cut(s) 209, 790
AjiI CACGTC 1 cut(s) 2021
AjnI CCWGG 2 cut(s) 587, 834
AjuI GAANNNNNNNTTGG 2 cut(s) 42, 74
AloI GAACNNNNNNTCC 2 cut(s) 237, 269
AluBI AGCT 6 cut(s) 53, 402, 465, 733, 1662, 1720
AluI AGCT 6 cut(s) 53, 402, 465, 733, 1662, 1720
Alw21I GWGCWC 1 cut(s) 1722
Alw26I GTCTC 1 cut(s) 313
AlwI GGATC 9 cut(s) 578, 591, 605, 618, 928, 1243, 1619, 1909, 1922
AlwNI CAGNNNCTG 1 cut(s) 531
AoxI GGCC 2 cut(s) 1057, 1253
ApeKI GCWGC 6 cut(s) 240, 730, 1443, 1662, 1976, 2024
ApoI RAATTY 4 cut(s) 152, 437, 1007, 2084
ArsI GACNNNNNNTTYG 4 cut(s) 237, 269, 875, 907
AseI ATTAAT 1 cut(s) 1119
AsiGI ACCGGT 2 cut(s) 209, 790
AspLEI GCGC 1 cut(s) 1295
AspS9I GGNCC 3 cut(s) 1166, 1253, 1419
AsuHPI GGTGA 3 cut(s) 780, 1427, 1934
AsuII TTCGAA 1 cut(s) 1887
AvaII GGWCC 2 cut(s) 1166, 1419
BaeGI GKGCMC 1 cut(s) 1179
BamHI GGATCC 3 cut(s) 583, 610, 1914
BanII GRGCYC 1 cut(s) 1722
BbsI GAAGAC 1 cut(s) 348
Bbv12I GWGCWC 1 cut(s) 1722
BbvCI CCTCAGC 1 cut(s) 54
BbvI GCAGC 6 cut(s) 252, 742, 1455, 1649, 1988, 2036
BccI CCATC 5 cut(s) 365, 478, 662, 1409, 1670
BcgI CGANNNNNNTGC 2 cut(s) 1734, 1768
BciT130I CCWGG 2 cut(s) 589, 836
BciVI GTATCC 2 cut(s) 739, 1809
BcoDI GTCTC 1 cut(s) 313
BfaI CTAG 3 cut(s) 968, 1778, 1839
BfmI CTRYAG 2 cut(s) 129, 1082
BfuI GTATCC 2 cut(s) 739, 1809
BglII AGATCT 2 cut(s) 964, 1022
BisI GCNGC 8 cut(s) 241, 696, 731, 1444, 1663, 1812, 1977, 2025
BlsI GCNGC 8 cut(s) 242, 697, 732, 1445, 1664, 1813, 1978, 2026
Bme1390I CCNGG 2 cut(s) 589, 836
Bme18I GGWCC 2 cut(s) 1166, 1419
BmgBI CACGTC 1 cut(s) 2021
BmgT120I GGNCC 3 cut(s) 1166, 1253, 1419
BmiI GGNNCC 5 cut(s) 585, 612, 1167, 1420, 1916
BmrFI CCNGG 2 cut(s) 589, 836
BmsI GCATC 7 cut(s) 193, 397, 565, 707, 919, 1332, 1430
BoxI GACNNNNGTC 1 cut(s) 348
BpiI GAAGAC 1 cut(s) 348
Bpu10I CCTNAGC 3 cut(s) 54, 1541, 1986
Bpu14I TTCGAA 1 cut(s) 1887
BsaHI GRCGYC 1 cut(s) 641
BsaJI CCNNGG 1 cut(s) 587
BsaWI WCCGGW 4 cut(s) 209, 790, 1045, 1872
Bsc4I CCNNNNNNNGG 8 cut(s) 134, 216, 841, 939, 1231, 1380, 1636, 1911
Bse118I RCCGGY 3 cut(s) 209, 790, 1759
Bse1I ACTGG 3 cut(s) 175, 871, 933
Bse3DI GCAATG 1 cut(s) 1072
BseBI CCWGG 2 cut(s) 589, 836
BseDI CCNNGG 1 cut(s) 587
BseGI GGATG 8 cut(s) 80, 94, 376, 412, 475, 1195, 1347, 1575
BseLI CCNNNNNNNGG 8 cut(s) 134, 216, 841, 939, 1231, 1380, 1636, 1911
BseMI GCAATG 1 cut(s) 1072
BseMII CTCAG 3 cut(s) 45, 1797, 2000
BseNI ACTGG 3 cut(s) 175, 871, 933
BseRI GAGGAG 3 cut(s) 1028, 1175, 2033
BseSI GKGCMC 1 cut(s) 1179
BseXI GCAGC 6 cut(s) 252, 742, 1455, 1649, 1988, 2036
BsgI GTGCAG 2 cut(s) 259, 2043
Bsh1236I CGCG 2 cut(s) 1295, 1814
BshFI GGCC 2 cut(s) 1059, 1255
BshTI ACCGGT 2 cut(s) 209, 790
BsiHKAI GWGCWC 1 cut(s) 1722
BsiSI CCGG 6 cut(s) 210, 791, 918, 1046, 1760, 1873
BslFI GGGAC 3 cut(s) 1121, 1432, 1670
BslI CCNNNNNNNGG 8 cut(s) 134, 216, 841, 939, 1231, 1380, 1636, 1911
BsmAI GTCTC 1 cut(s) 313
BsmFI GGGAC 3 cut(s) 1121, 1432, 1670
BsmI GAATGC 1 cut(s) 1957
BsnI GGCC 2 cut(s) 1059, 1255
Bsp119I TTCGAA 1 cut(s) 1887
Bsp1286I GDGCHC 2 cut(s) 1179, 1722
BspACI CCGC 4 cut(s) 695, 1063, 1232, 1812
BspANI GGCC 2 cut(s) 1059, 1255
BspCNI CTCAG 3 cut(s) 46, 1796, 1999
BspFNI CGCG 2 cut(s) 1295, 1814
BspLI GGNNCC 5 cut(s) 585, 612, 1167, 1420, 1916
BspPI GGATC 9 cut(s) 578, 591, 605, 618, 928, 1243, 1619, 1909, 1922
BspT104I TTCGAA 1 cut(s) 1887
BsrDI GCAATG 1 cut(s) 1072
BsrFI RCCGGY 3 cut(s) 209, 790, 1759
BsrI ACTGG 3 cut(s) 175, 871, 933
BssAI RCCGGY 3 cut(s) 209, 790, 1759
BssECI CCNNGG 1 cut(s) 587
BssNI GRCGYC 1 cut(s) 641
Bst2UI CCWGG 2 cut(s) 589, 836
Bst4CI ACNGT 8 cut(s) 133, 331, 706, 1322, 1507, 1595, 1795, 1893
Bst6I CTCTTC 1 cut(s) 177
BstACI GRCGYC 1 cut(s) 641
BstAPI GCANNNNNTGC 3 cut(s) 203, 1769, 1982
BstBI TTCGAA 1 cut(s) 1887
BstC8I GCNNGC 3 cut(s) 816, 1761, 2095
BstDEI CTNAG 7 cut(s) 54, 365, 674, 1541, 1615, 1783, 1986
BstEII GGTNACC 1 cut(s) 331
BstENI CCTNNNNNAGG 1 cut(s) 132
BstF5I GGATG 8 cut(s) 80, 94, 376, 412, 475, 1195, 1347, 1575
BstFNI CGCG 2 cut(s) 1295, 1814
BstHHI GCGC 1 cut(s) 1295
BstMAI GTCTC 1 cut(s) 313
BstMWI GCNNNNNNNGC 6 cut(s) 203, 647, 1261, 1769, 1778, 1982
BstNI CCWGG 2 cut(s) 589, 836
BstNSI RCATGY 2 cut(s) 1092, 1864
BstPAI GACNNNNGTC 1 cut(s) 348
BstPI GGTNACC 1 cut(s) 331
BstSCI CCNGG 2 cut(s) 587, 834
BstSFI CTRYAG 2 cut(s) 129, 1082
BstSLI GKGCMC 1 cut(s) 1179
BstUI CGCG 2 cut(s) 1295, 1814
BstV1I GCAGC 6 cut(s) 252, 742, 1455, 1649, 1988, 2036
BstV2I GAAGAC 1 cut(s) 348
BstX2I RGATCY 7 cut(s) 583, 610, 920, 964, 1022, 1611, 1914
BstYI RGATCY 7 cut(s) 583, 610, 920, 964, 1022, 1611, 1914
BsuI GTATCC 2 cut(s) 739, 1809
BsuRI GGCC 2 cut(s) 1059, 1255
BtgZI GCGATG 1 cut(s) 999
BtrI CACGTC 1 cut(s) 2021
BtsCI GGATG 8 cut(s) 80, 94, 376, 412, 475, 1195, 1347, 1575
BtsI GCAGTG 2 cut(s) 585, 2100
BtsIMutI CAGTG 6 cut(s) 585, 1327, 1791, 1800, 2100, 2110
Cac8I GCNNGC 3 cut(s) 816, 1761, 2095
CaiI CAGNNNCTG 1 cut(s) 531
CfoI GCGC 1 cut(s) 1295
Cfr10I RCCGGY 3 cut(s) 209, 790, 1759
Cfr13I GGNCC 3 cut(s) 1166, 1253, 1419
CseI GACGC 4 cut(s) 150, 630, 1284, 1676
Csp6I GTAC 6 cut(s) 168, 781, 794, 829, 936, 2029
CspAI ACCGGT 2 cut(s) 209, 790
CviQI GTAC 6 cut(s) 168, 781, 794, 829, 936, 2029
DdeI CTNAG 7 cut(s) 54, 365, 674, 1541, 1615, 1783, 1986
Eam1104I CTCTTC 1 cut(s) 177
EarI CTCTTC 1 cut(s) 177
Ecl136II GAGCTC 1 cut(s) 1720
Eco24I GRGCYC 1 cut(s) 1722
Eco47I GGWCC 2 cut(s) 1166, 1419
Eco53kI GAGCTC 1 cut(s) 1720
Eco57I CTGAAG 2 cut(s) 129, 360
Eco91I GGTNACC 1 cut(s) 331
EcoICRI GAGCTC 1 cut(s) 1720
EcoNI CCTNNNNNAGG 1 cut(s) 132
EcoO109I RGGNCCY 1 cut(s) 1419
EcoO65I GGTNACC 1 cut(s) 331
EcoRII CCWGG 2 cut(s) 587, 834
EcoT38I GRGCYC 1 cut(s) 1722
FalI AAGNNNNNCTT 2 cut(s) 1136, 1168
FaqI GGGAC 3 cut(s) 1121, 1432, 1670
FauI CCCGC 1 cut(s) 1225
FblI GTMKAC 1 cut(s) 139
Fnu4HI GCNGC 8 cut(s) 241, 696, 731, 1444, 1663, 1812, 1977, 2025
FokI GGATG 8 cut(s) 87, 101, 383, 419, 482, 1202, 1354, 1582
FriOI GRGCYC 1 cut(s) 1722
Fsp4HI GCNGC 8 cut(s) 241, 696, 731, 1444, 1663, 1812, 1977, 2025
FspBI CTAG 3 cut(s) 968, 1778, 1839
GlaI GCGC 1 cut(s) 1294
GluI GCNGC 8 cut(s) 241, 696, 731, 1444, 1663, 1812, 1977, 2025
HaeIII GGCC 2 cut(s) 1059, 1255
HapII CCGG 6 cut(s) 210, 791, 918, 1046, 1760, 1873
HgaI GACGC 4 cut(s) 150, 630, 1284, 1676
HhaI GCGC 1 cut(s) 1295
Hin1I GRCGYC 1 cut(s) 641
Hin6I GCGC 1 cut(s) 1293
HinP1I GCGC 1 cut(s) 1293
HincII GTYRAC 5 cut(s) 140, 451, 549, 894, 1467
HindII GTYRAC 5 cut(s) 140, 451, 549, 894, 1467
HindIII AAGCTT 2 cut(s) 400, 463
HinfI GANTC 7 cut(s) 310, 361, 903, 1694, 1835, 2038, 2079
HpaII CCGG 6 cut(s) 210, 791, 918, 1046, 1760, 1873
HphI GGTGA 3 cut(s) 780, 1427, 1934
Hpy166II GTNNAC 8 cut(s) 140, 451, 549, 783, 894, 1467, 1603, 1791
Hpy188I TCNGA 6 cut(s) 181, 499, 777, 1315, 1533, 1728
Hpy188III TCNNGA 8 cut(s) 29, 307, 968, 1412, 1691, 1855, 1988, 2076
Hpy8I GTNNAC 8 cut(s) 140, 451, 549, 783, 894, 1467, 1603, 1791
Hpy99I CGWCG 3 cut(s) 144, 781, 883
HpyAV CCTTC 6 cut(s) 424, 672, 986, 1106, 1138, 1723
HpyCH4III ACNGT 8 cut(s) 133, 331, 706, 1322, 1507, 1595, 1795, 1893
HpyCH4IV ACGT 5 cut(s) 230, 384, 779, 886, 2020
HpyF10VI GCNNNNNNNGC 6 cut(s) 203, 647, 1261, 1769, 1778, 1982
HpyF3I CTNAG 7 cut(s) 54, 365, 674, 1541, 1615, 1783, 1986
HpySE526I ACGT 5 cut(s) 230, 384, 779, 886, 2020
Hsp92I GRCGYC 1 cut(s) 641
HspAI GCGC 1 cut(s) 1293
KroI GCCGGC 1 cut(s) 1759
KroNI GCCGGC 1 cut(s) 1761
LmnI GCTCC 2 cut(s) 981, 1717
Lsp1109I GCAGC 6 cut(s) 252, 742, 1455, 1649, 1988, 2036
LweI GCATC 7 cut(s) 193, 397, 565, 707, 919, 1332, 1430
MaeI CTAG 3 cut(s) 968, 1778, 1839
MaeII ACGT 5 cut(s) 230, 384, 779, 886, 2020
MaeIII GTNAC 2 cut(s) 331, 857
MboII GAAGA 6 cut(s) 122, 194, 353, 493, 974, 1220
MfeI CAATTG 3 cut(s) 198, 954, 1170
MflI RGATCY 7 cut(s) 583, 610, 920, 964, 1022, 1611, 1914
MhlI GDGCHC 2 cut(s) 1179, 1722
MlyI GAGTC 2 cut(s) 370, 1703
MmeI TCCRAC 3 cut(s) 40, 782, 800
MroNI GCCGGC 1 cut(s) 1759
MseI TTAA 4 cut(s) 326, 1119, 1850, 2088
MslI CAYNNNNRTG 2 cut(s) 69, 1593
MspA1I CMGCKG 2 cut(s) 733, 1662
MspI CCGG 6 cut(s) 210, 791, 918, 1046, 1760, 1873
MspR9I CCNGG 2 cut(s) 589, 836
MunI CAATTG 3 cut(s) 198, 954, 1170
Mva1269I GAATGC 1 cut(s) 1957
MvaI CCWGG 2 cut(s) 589, 836
MvnI CGCG 2 cut(s) 1295, 1814
MwoI GCNNNNNNNGC 6 cut(s) 203, 647, 1261, 1769, 1778, 1982
NaeI GCCGGC 1 cut(s) 1761
NgoMIV GCCGGC 1 cut(s) 1759
NlaIV GGNNCC 5 cut(s) 585, 612, 1167, 1420, 1916
NspI RCATGY 2 cut(s) 1092, 1864
NspV TTCGAA 1 cut(s) 1887
PciI ACATGT 1 cut(s) 1088
PctI GAATGC 1 cut(s) 1957
PdiI GCCGGC 1 cut(s) 1761
PfeI GAWTC 5 cut(s) 310, 903, 1835, 2038, 2079
PflFI GACNNNGTC 3 cut(s) 1052, 1686, 1934
PinAI ACCGGT 2 cut(s) 209, 790
PkrI GCNGC 8 cut(s) 242, 697, 732, 1445, 1664, 1813, 1978, 2026
PleI GAGTC 2 cut(s) 369, 1702
PpsI GAGTC 2 cut(s) 369, 1702
PpuMI RGGWCCY 1 cut(s) 1419
PscI ACATGT 1 cut(s) 1088
PshAI GACNNNNGTC 1 cut(s) 348
PshBI ATTAAT 1 cut(s) 1119
PsiI TTATAA 1 cut(s) 521
Psp124BI GAGCTC 1 cut(s) 1722
Psp1406I AACGTT 1 cut(s) 886
Psp5II RGGWCCY 1 cut(s) 1419
Psp6I CCWGG 2 cut(s) 587, 834
PspEI GGTNACC 1 cut(s) 331
PspGI CCWGG 2 cut(s) 587, 834
PspN4I GGNNCC 5 cut(s) 585, 612, 1167, 1420, 1916
PspPI GGNCC 3 cut(s) 1166, 1253, 1419
PspPPI RGGWCCY 1 cut(s) 1419
PstNI CAGNNNCTG 1 cut(s) 531
PsuI RGATCY 7 cut(s) 583, 610, 920, 964, 1022, 1611, 1914
PsyI GACNNNGTC 3 cut(s) 1052, 1686, 1934
PvuII CAGCTG 2 cut(s) 733, 1662
RsaI GTAC 6 cut(s) 169, 782, 795, 830, 937, 2030
RsaNI GTAC 6 cut(s) 168, 781, 794, 829, 936, 2029
RseI CAYNNNNRTG 2 cut(s) 69, 1593
SacI GAGCTC 1 cut(s) 1722
SalI GTCGAC 1 cut(s) 138
SaqAI TTAA 4 cut(s) 326, 1119, 1850, 2088
SatI GCNGC 8 cut(s) 241, 696, 731, 1444, 1663, 1812, 1977, 2025
Sau96I GGNCC 3 cut(s) 1166, 1253, 1419
SchI GAGTC 2 cut(s) 370, 1703
ScrFI CCNGG 2 cut(s) 589, 836
SduI GDGCHC 2 cut(s) 1179, 1722
SfaNI GCATC 7 cut(s) 193, 397, 565, 707, 919, 1332, 1430
SfcI CTRYAG 2 cut(s) 129, 1082
SfuI TTCGAA 1 cut(s) 1887
SinI GGWCC 2 cut(s) 1166, 1419
SmiMI CAYNNNNRTG 2 cut(s) 69, 1593
SsiI CCGC 4 cut(s) 695, 1063, 1232, 1812
SspI AATATT 1 cut(s) 21
SspMI CTAG 3 cut(s) 968, 1778, 1839
SstI GAGCTC 1 cut(s) 1722
StyD4I CCNGG 2 cut(s) 587, 834
TaaI ACNGT 8 cut(s) 133, 331, 706, 1322, 1507, 1595, 1795, 1893
TaiI ACGT 5 cut(s) 233, 387, 782, 889, 2023
TaqI TCGA 8 cut(s) 139, 291, 863, 901, 1134, 1413, 1632, 1887
TatI WGTACW 2 cut(s) 167, 935
TauI GCSGC 2 cut(s) 698, 1814
TfiI GAWTC 5 cut(s) 310, 903, 1835, 2038, 2079
Tru1I TTAA 4 cut(s) 326, 1119, 1850, 2088
Tru9I TTAA 4 cut(s) 326, 1119, 1850, 2088
TscAI CASTG 5 cut(s) 585, 1327, 1791, 1800, 2107
TseI GCWGC 6 cut(s) 240, 730, 1443, 1662, 1976, 2024
TspDTI ATGAA 8 cut(s) 17, 773, 1157, 1206, 1347, 1469, 1503, 1964
TspGWI ACGGA 6 cut(s) 245, 338, 1214, 1565, 1907, 1949
TspRI CASTG 5 cut(s) 585, 1327, 1791, 1800, 2107
Tth111I GACNNNGTC 3 cut(s) 1052, 1686, 1934
VpaK11BI GGWCC 2 cut(s) 1166, 1419
VspI ATTAAT 1 cut(s) 1119
XagI CCTNNNNNAGG 1 cut(s) 132
XapI RAATTY 4 cut(s) 152, 437, 1007, 2084
XbaI TCTAGA 1 cut(s) 967
XceI RCATGY 2 cut(s) 1092, 1864
XmiI GTMKAC 1 cut(s) 139
XspI CTAG 3 cut(s) 968, 1778, 1839
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.