FvH4_6g40680

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000030
Physical Location & Seq
Reverse (-)
32141655 .. 32147058
5404 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g40680.t1

Sequence Viewer

Length: 1356 bp
ATGCTACACAAGGTGTATGGGTTACAAAGAGATGCAAATTTCGGAGAAAGCGTGTATTCCGATTCGCGAGACAAGAGCACCGGATTGAAAACCAACTTGTTTGATGACATTGGTGATTTGAAGAAGGAGCTGGCTGCTGTTGAAGATGAAATTGGTTCTCTGGAATCAACTTTTTATAGCTTGGGTCCGGATATTGCAAACCTGAGAAGGGTAGTGACAGCTTTACACAAGGTGATTGTTACGCGGGAACCTGAATCCCCGAGTTTTCCTGTTAGTCTTGTGAAGGAAGTGCACCATGTTAGCGCGATGGAGCCGCAAGGCATTAACCAGTTGGACAGGAAAGAATGTCCTCCGAAGGATTTGACGAGGTGTGTGTACCGTAATGAGCCATCTGAGAAAACAACCGAAGAAGTAATGGCGCAAATGAGGGCAGGGAATGACATCAGTTTGCATAAGAAACCGATGAGGATGATGCTTGGCAACATAGCCAATATATCCCGTAGAGAAGAAAAATTGCTGAATTATTTATTCTGCAATAAAGGAGTTGTTGAGGATATCGTTGGAAGCGACGAAGTTGGGCGATACAGGGAGGCAAGTGTATCTCGTTGCCACATCAAGTGTCTAACTCCTAAACGGTGTATAAGTAGTGAGGTAATAAACCTAATGGGTGCATACTGTTTTGCAAAATCAACTGACTGCTGGTTTGTCCCTACGTATTTTTCTGAACGTGCAAAGGAGGGGGCCTGTCATCCGGTCCAGGAAGCCCACCTATCAGCAACCATTACCTTATGCGGGCTACGCAAATTTAATGGCCGAATTGAGGGAAGCGAAAGGATATTTATACCGATTATGGACGACCTTTGTCAACACTGGTTTCTTGCCGTTGTAAGGTTTGTGGGTGACTGTGAGATATGGGACAGCAAACCTATTCTGGCATCGCAGCAGCGTCGCAAGGACTACGTTGAATCCGCTGTCAATCTCCTCCTGTCCGTTTTTGCCTCCGAACTTAAACAGTCCCCGTGGGTCTGTTCGGAAGCGGCTTCATTCACCTATTTCTACCCAGCCATATGCACAACTGAGGTTAACGACTATGACTCTGGTGTATGCGTCATCAGGAATATGCAGTTCTACGGACAGCGTTGGTATGAAGGGTACAATTCTGGTGATCAGAGAATGAGGATTGCCCTTGAAGTAGTCAACAGCCCCCTCAACGAATGTCGCGATGATGTCTGGGATTGTGTATACCTTGAGAAGAAAAATGCCAGCAATTTGCAGGAGCGTTCAGGATCTGAAACCCCTGATCCTCTACTTGACCGGGCCGGTATGAGGTTGAAGCCCCGTGTTCCTCGTAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

452

Amino Acids

51.32

Weight (kDa)

6.2

Isoelectric Point (pI)

49.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1242
AccII CGCG 4 cut(s) 67, 244, 305, 1221
AccIII TCCGGA 1 cut(s) 187
AciI CCGC 5 cut(s) 244, 314, 792, 969, 1037
AclWI GGATC 2 cut(s) 1294, 1295
AcoI YGGCCR 1 cut(s) 811
AcsI RAATTY 2 cut(s) 37, 803
AdeI CACNNNGTG 2 cut(s) 13, 232
AfaI GTAC 2 cut(s) 377, 1154
AfiI CCNNNNNNNGG 5 cut(s) 208, 792, 820, 888, 1326
AgsI TTSAA 6 cut(s) 88, 121, 143, 965, 1190, 1333
AjnI CCWGG 1 cut(s) 756
AjuI GAANNNNNNNTTGG 2 cut(s) 135, 167
AluBI AGCT 3 cut(s) 130, 180, 221
AluI AGCT 3 cut(s) 130, 180, 221
Alw21I GWGCWC 2 cut(s) 80, 294
Alw26I GTCTC 1 cut(s) 63
Alw44I GTGCAC 1 cut(s) 290
AlwI GGATC 2 cut(s) 1294, 1295
AlwNI CAGNNNCTG 1 cut(s) 1289
Ama87I CYCGRG 1 cut(s) 259
Aor13HI TCCGGA 1 cut(s) 187
AoxI GGCC 3 cut(s) 741, 811, 1317
ApaLI GTGCAC 1 cut(s) 290
ApeKI GCWGC 3 cut(s) 134, 940, 943
ApoI RAATTY 2 cut(s) 37, 803
ArsI GACNNNNNNTTYG 2 cut(s) 686, 718
AspLEI GCGC 2 cut(s) 305, 421
AspS9I GGNCC 4 cut(s) 185, 741, 754, 1317
AsuC2I CCSGG 1 cut(s) 1316
AsuHPI GGTGA 5 cut(s) 125, 244, 911, 1039, 1175
AvaI CYCGRG 1 cut(s) 259
AvaII GGWCC 2 cut(s) 185, 754
BaeGI GKGCMC 1 cut(s) 294
Bbv12I GWGCWC 2 cut(s) 80, 294
BbvI GCAGC 3 cut(s) 121, 952, 955
BccI CCATC 2 cut(s) 301, 397
BceAI ACGGC 1 cut(s) 866
BcgI CGANNNNNNTGC 2 cut(s) 929, 963
BciT130I CCWGG 1 cut(s) 758
BclI TGATCA 1 cut(s) 1165
BcnI CCSGG 1 cut(s) 1316
BcoDI GTCTC 1 cut(s) 63
BisI GCNGC 5 cut(s) 135, 314, 941, 944, 1038
BlsI GCNGC 5 cut(s) 136, 315, 942, 945, 1039
Bme1390I CCNGG 2 cut(s) 758, 1316
Bme18I GGWCC 2 cut(s) 185, 754
BmeT110I CYCGRG 1 cut(s) 259
BmgT120I GGNCC 4 cut(s) 185, 741, 754, 1317
BmiI GGNNCC 4 cut(s) 186, 249, 312, 742
BmrFI CCNGG 2 cut(s) 758, 1316
BmsI GCATC 3 cut(s) 22, 462, 944
BoxI GACNNNNGTC 1 cut(s) 861
BpuEI CTTGAG 1 cut(s) 1268
BpuMI CCSGG 1 cut(s) 1316
BsaAI YACGTR 1 cut(s) 714
BsaJI CCNNGG 1 cut(s) 1019
BsaWI WCCGGW 3 cut(s) 80, 187, 751
BsaXI ACNNNNNCTCC 2 cut(s) 36, 66
Bsc4I CCNNNNNNNGG 5 cut(s) 208, 792, 820, 888, 1326
Bse118I RCCGGY 1 cut(s) 1319
Bse1I ACTGG 2 cut(s) 328, 875
BseAI TCCGGA 1 cut(s) 187
BseBI CCWGG 1 cut(s) 758
BseDI CCNNGG 1 cut(s) 1019
BseGI GGATG 2 cut(s) 474, 748
BseLI CCNNNNNNNGG 5 cut(s) 208, 792, 820, 888, 1326
BseMII CTCAG 3 cut(s) 194, 384, 1068
BseNI ACTGG 2 cut(s) 328, 875
BseRI GAGGAG 1 cut(s) 971
BseSI GKGCMC 1 cut(s) 294
BseXI GCAGC 3 cut(s) 121, 952, 955
BseYI CCCAGC 1 cut(s) 1060
Bsh1236I CGCG 4 cut(s) 67, 244, 305, 1221
BshFI GGCC 3 cut(s) 743, 813, 1319
BsiHKAI GWGCWC 2 cut(s) 80, 294
BsiHKCI CYCGRG 1 cut(s) 259
BsiSI CCGG 5 cut(s) 81, 188, 752, 1315, 1320
BslFI GGGAC 3 cut(s) 692, 929, 1000
BslI CCNNNNNNNGG 5 cut(s) 208, 792, 820, 888, 1326
BsmAI GTCTC 1 cut(s) 63
BsmFI GGGAC 3 cut(s) 692, 929, 1000
BsnI GGCC 3 cut(s) 743, 813, 1319
BsoBI CYCGRG 1 cut(s) 259
Bsp1286I GDGCHC 2 cut(s) 80, 294
Bsp13I TCCGGA 1 cut(s) 187
Bsp143I GATC 3 cut(s) 1165, 1286, 1300
Bsp68I TCGCGA 2 cut(s) 67, 1221
BspACI CCGC 5 cut(s) 244, 314, 792, 969, 1037
BspANI GGCC 3 cut(s) 743, 813, 1319
BspCNI CTCAG 3 cut(s) 195, 385, 1069
BspEI TCCGGA 1 cut(s) 187
BspFNI CGCG 4 cut(s) 67, 244, 305, 1221
BspLI GGNNCC 4 cut(s) 186, 249, 312, 742
BspPI GGATC 2 cut(s) 1294, 1295
BsrFI RCCGGY 1 cut(s) 1319
BsrI ACTGG 2 cut(s) 328, 875
BssAI RCCGGY 1 cut(s) 1319
BssECI CCNNGG 1 cut(s) 1019
BssMI GATC 3 cut(s) 1165, 1286, 1300
BssNAI GTATAC 1 cut(s) 1243
Bst1107I GTATAC 1 cut(s) 1243
Bst2UI CCWGG 1 cut(s) 758
Bst4CI ACNGT 5 cut(s) 380, 636, 677, 905, 1014
BstBAI YACGTR 1 cut(s) 714
BstC8I GCNNGC 3 cut(s) 132, 794, 1264
BstDEI CTNAG 3 cut(s) 203, 393, 1077
BstDSI CCRYGG 1 cut(s) 1019
BstF5I GGATG 2 cut(s) 474, 748
BstFNI CGCG 4 cut(s) 67, 244, 305, 1221
BstHHI GCGC 2 cut(s) 305, 421
BstKTI GATC 3 cut(s) 1168, 1289, 1303
BstMAI GTCTC 1 cut(s) 63
BstMBI GATC 3 cut(s) 1165, 1286, 1300
BstMWI GCNNNNNNNGC 1 cut(s) 798
BstNI CCWGG 1 cut(s) 758
BstPAI GACNNNNGTC 1 cut(s) 861
BstSCI CCNGG 2 cut(s) 756, 1314
BstSLI GKGCMC 1 cut(s) 294
BstSNI TACGTA 1 cut(s) 714
BstUI CGCG 4 cut(s) 67, 244, 305, 1221
BstV1I GCAGC 3 cut(s) 121, 952, 955
BstX2I RGATCY 1 cut(s) 1286
BstYI RGATCY 1 cut(s) 1286
BstZ17I GTATAC 1 cut(s) 1243
BsuRI GGCC 3 cut(s) 743, 813, 1319
BtgI CCRYGG 1 cut(s) 1019
BtgZI GCGATG 3 cut(s) 320, 921, 1236
BtsCI GGATG 2 cut(s) 474, 748
BtsIMutI CAGTG 1 cut(s) 868
BtuMI TCGCGA 2 cut(s) 67, 1221
Cac8I GCNNGC 3 cut(s) 132, 794, 1264
CaiI CAGNNNCTG 1 cut(s) 1289
CfoI GCGC 2 cut(s) 305, 421
Cfr10I RCCGGY 1 cut(s) 1319
Cfr13I GGNCC 4 cut(s) 185, 741, 754, 1317
CseI GACGC 2 cut(s) 935, 1096
Csp6I GTAC 2 cut(s) 376, 1153
CviAII CATG 1 cut(s) 296
CviQI GTAC 2 cut(s) 376, 1153
DdeI CTNAG 3 cut(s) 203, 393, 1077
DpnI GATC 3 cut(s) 1167, 1288, 1302
DpnII GATC 3 cut(s) 1165, 1286, 1300
DraIII CACNNNGTG 2 cut(s) 13, 232
EaeI YGGCCR 1 cut(s) 811
Eco105I TACGTA 1 cut(s) 714
Eco32I GATATC 1 cut(s) 556
Eco47I GGWCC 2 cut(s) 185, 754
Eco88I CYCGRG 1 cut(s) 259
EcoO109I RGGNCCY 1 cut(s) 741
EcoRII CCWGG 1 cut(s) 756
EcoRV GATATC 1 cut(s) 556
FaeI CATG 1 cut(s) 299
FaqI GGGAC 3 cut(s) 692, 929, 1000
FatI CATG 1 cut(s) 295
FauI CCCGC 2 cut(s) 237, 785
FauNDI CATATG 1 cut(s) 1067
FbaI TGATCA 1 cut(s) 1165
FblI GTMKAC 1 cut(s) 1242
Fnu4HI GCNGC 5 cut(s) 135, 314, 941, 944, 1038
FokI GGATG 2 cut(s) 481, 735
Fsp4HI GCNGC 5 cut(s) 135, 314, 941, 944, 1038
GlaI GCGC 2 cut(s) 304, 420
GluI GCNGC 5 cut(s) 135, 314, 941, 944, 1038
GsaI CCCAGC 1 cut(s) 1064
HaeIII GGCC 3 cut(s) 743, 813, 1319
HapII CCGG 5 cut(s) 81, 188, 752, 1315, 1320
HgaI GACGC 2 cut(s) 935, 1096
HhaI GCGC 2 cut(s) 305, 421
Hin1II CATG 1 cut(s) 299
Hin6I GCGC 2 cut(s) 303, 419
HinP1I GCGC 2 cut(s) 303, 419
HincII GTYRAC 3 cut(s) 866, 1084, 1198
HindII GTYRAC 3 cut(s) 866, 1084, 1198
HinfI GANTC 5 cut(s) 62, 164, 254, 965, 1094
HpaI GTTAAC 1 cut(s) 1084
HpaII CCGG 5 cut(s) 81, 188, 752, 1315, 1320
HphI GGTGA 5 cut(s) 125, 244, 911, 1039, 1175
Hpy166II GTNNAC 6 cut(s) 292, 376, 866, 1084, 1198, 1243
Hpy188I TCNGA 9 cut(s) 44, 61, 354, 394, 724, 1003, 1033, 1170, 1291
Hpy188III TCNNGA 6 cut(s) 66, 161, 188, 1114, 1220, 1284
Hpy8I GTNNAC 6 cut(s) 292, 376, 866, 1084, 1198, 1243
Hpy99I CGWCG 2 cut(s) 572, 951
HpyAV CCTTC 5 cut(s) 118, 201, 277, 349, 1142
HpyCH4III ACNGT 5 cut(s) 380, 636, 677, 905, 1014
HpyCH4IV ACGT 3 cut(s) 713, 727, 960
HpyF10VI GCNNNNNNNGC 1 cut(s) 798
HpyF3I CTNAG 3 cut(s) 203, 393, 1077
HpySE526I ACGT 3 cut(s) 713, 727, 960
Hsp92II CATG 1 cut(s) 299
HspAI GCGC 2 cut(s) 303, 419
Kpn2I TCCGGA 1 cut(s) 187
Ksp22I TGATCA 1 cut(s) 1165
KspAI GTTAAC 1 cut(s) 1084
Kzo9I GATC 3 cut(s) 1165, 1286, 1300
LmnI GCTCC 3 cut(s) 127, 310, 1276
Lsp1109I GCAGC 3 cut(s) 121, 952, 955
LweI GCATC 3 cut(s) 22, 462, 944
MaeII ACGT 3 cut(s) 713, 727, 960
MaeIII GTNAC 4 cut(s) 21, 214, 238, 899
MalI GATC 3 cut(s) 1167, 1288, 1302
MboI GATC 3 cut(s) 1165, 1286, 1300
MboII GAAGA 5 cut(s) 133, 155, 419, 518, 1264
MflI RGATCY 1 cut(s) 1286
MhlI GDGCHC 2 cut(s) 80, 294
MluCI AATT 8 cut(s) 37, 150, 512, 520, 803, 816, 1156, 1267
MlyI GAGTC 1 cut(s) 1088
MmeI TCCRAC 2 cut(s) 312, 541
MroI TCCGGA 1 cut(s) 187
MseI TTAA 4 cut(s) 324, 807, 1008, 1083
MspA1I CMGCKG 1 cut(s) 971
MspI CCGG 5 cut(s) 81, 188, 752, 1315, 1320
MspR9I CCNGG 2 cut(s) 758, 1316
MvaI CCWGG 1 cut(s) 758
MvnI CGCG 4 cut(s) 67, 244, 305, 1221
MwoI GCNNNNNNNGC 1 cut(s) 798
NciI CCSGG 1 cut(s) 1316
NdeI CATATG 1 cut(s) 1067
NdeII GATC 3 cut(s) 1165, 1286, 1300
NlaIII CATG 1 cut(s) 299
NlaIV GGNNCC 4 cut(s) 186, 249, 312, 742
NmuCI GTSAC 2 cut(s) 214, 899
NruI TCGCGA 2 cut(s) 67, 1221
PcsI WCGNNNNNNNCGW 3 cut(s) 48, 564, 1218
PfeI GAWTC 4 cut(s) 62, 164, 254, 965
PfoI TCCNGGA 1 cut(s) 756
PkrI GCNGC 5 cut(s) 136, 315, 942, 945, 1039
PleI GAGTC 1 cut(s) 1088
PpsI GAGTC 1 cut(s) 1088
Ppu21I YACGTR 1 cut(s) 714
PshAI GACNNNNGTC 1 cut(s) 861
Psp6I CCWGG 1 cut(s) 756
PspFI CCCAGC 1 cut(s) 1060
PspGI CCWGG 1 cut(s) 756
PspN4I GGNNCC 4 cut(s) 186, 249, 312, 742
PspPI GGNCC 4 cut(s) 185, 741, 754, 1317
PstNI CAGNNNCTG 1 cut(s) 1289
PsuI RGATCY 1 cut(s) 1286
RruI TCGCGA 2 cut(s) 67, 1221
RsaI GTAC 2 cut(s) 377, 1154
RsaNI GTAC 2 cut(s) 376, 1153
SaqAI TTAA 4 cut(s) 324, 807, 1008, 1083
SatI GCNGC 5 cut(s) 135, 314, 941, 944, 1038
Sau3AI GATC 3 cut(s) 1165, 1286, 1300
Sau96I GGNCC 4 cut(s) 185, 741, 754, 1317
SchI GAGTC 1 cut(s) 1088
ScrFI CCNGG 2 cut(s) 758, 1316
SduI GDGCHC 2 cut(s) 80, 294
SfaNI GCATC 3 cut(s) 22, 462, 944
SinI GGWCC 2 cut(s) 185, 754
SmlI CTYRAG 1 cut(s) 1247
SmoI CTYRAG 1 cut(s) 1247
SnaBI TACGTA 1 cut(s) 714
Sse9I AATT 8 cut(s) 37, 150, 512, 520, 803, 816, 1156, 1267
SsiI CCGC 5 cut(s) 244, 314, 792, 969, 1037
StyD4I CCNGG 2 cut(s) 756, 1314
TaaI ACNGT 5 cut(s) 380, 636, 677, 905, 1014
TaiI ACGT 3 cut(s) 716, 730, 963
TasI AATT 8 cut(s) 37, 150, 512, 520, 803, 816, 1156, 1267
TauI GCSGC 2 cut(s) 316, 1040
TfiI GAWTC 4 cut(s) 62, 164, 254, 965
Tru1I TTAA 4 cut(s) 324, 807, 1008, 1083
Tru9I TTAA 4 cut(s) 324, 807, 1008, 1083
TscAI CASTG 1 cut(s) 875
TseFI GTSAC 2 cut(s) 214, 899
TseI GCWGC 3 cut(s) 134, 940, 943
Tsp45I GTSAC 2 cut(s) 214, 899
TspDTI ATGAA 3 cut(s) 162, 1032, 1161
TspGWI ACGGA 2 cut(s) 979, 1146
TspRI CASTG 1 cut(s) 875
VneI GTGCAC 1 cut(s) 290
VpaK11BI GGWCC 2 cut(s) 185, 754
XapI RAATTY 2 cut(s) 37, 803
XmiI GTMKAC 1 cut(s) 1242
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.