Rmu_sc0021854.1_g000001

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0021854.1
OG0000030
Physical Location & Seq
Forward (+)
1 .. 2724
2724 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0021854.1_g000001.1.cds

Sequence Viewer

Length: 1744 bp
gatcagctttgccttgtatgcccttgcaaccctgctatctctagtaacaggaatccatgtcgaacgaagatatcttattccacttaaggatccaaatggcctgtgttcaaaaaactggggaaagtttgcatttgataagctcgttgaaagggtgtcattgtttcagggcacggggattagattggccggaggttgtattctgttccttcagttgttctatctggacgttgttagcaatgacatgtttgtttttccgaagacggtgaaacctgttatgatatggggcgcggacgaggcaaagaaaatttatgagcaggtggagagcatggggggatggaaaagtgagtctgtttatgtgacaaagaggtatttgtgggacagaacaattcagttcagtggatcggttgatgccagcacagggataaaaaccaatgtcgtggaagacttgtcagaagtgatggctgatgtgggtgtcgttaaaggggacatccggaatctaaaggcaatggtcggtcaattgggacaggatatgtgccgtttgaggagcgcaattatgacgttagaaacatctcttgagaagctgaaggctgagggcctctgtcagcttgtttcagacactatcatgggagtgtttgaggataagcagaatgattatgtgggcaatgatgggactgatgtttttgttgatggtcaaaagcagcatggtccagaatttgagtcagatgatgatgggatgcctaatgctaaatccaaaattgtcatttccaatgaggtggtagcataccgggatcgcagcactgaagttgagagaagtgaacagacgaggttcgaagcggtggccgagatttcagagagggatgcatacttattggcatatctcttcaacaagaaggtttctgcagacgacagttttgggaggtgtatctcgctgggacctgagctgcttgtccccaacgcagtcgttgactgccgaggtagcaaccttcaacctaaccctgctatatttaatgtgttatgtttaatgaatgtggttgtcaacatatcggctgcgtacttgtgccagaggggatctgagaactggttcttgccagctacagtgtcggagcgtgctaaggagatttcggcaggtatgctagtggaagctattgtgccttcgaccattacactctgcaaactgggaagatttattggccgattattgtcatgcaataagatgttcctccccatccatgacggggttgtgaagcattggtttttggctgtggtgaacataccggacgccgtgtgtgaaatatgggacagcaaccctgttgattctgctaatacacgcaggcaggaatatgccattgcatcgatgtgtttgcttgaaaaagtatttggcaatgaactgcgaatggcacccgacctgtacgcacggtttggatcattctccattagttatccagagtcttgccctctgcatcccagatctgaagactccggaatatttgtgataagaaacatgcagttttacagacagcggtggtacctagggtttaactccggcgaccagagggttcgtatggcacttgagattgtcaatcaccctacgaatgaaattcgtgaacgggtgtggagtgccgccgccgaggaagtcccatatgatgtacctaccacgggcgtgccaccattatctctgaaggaggatgcagttctcccaacttcgggcatgaagttcaatccacgccggtccaagcgcggatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

580

Amino Acids

64.82

Weight (kDa)

5.57

Isoelectric Point (pI)

37.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 305
Acc36I ACCTGC 2 cut(s) 305, 1116
Acc65I GGTACC 1 cut(s) 1525
AccB1I GGYRCC 2 cut(s) 1397, 1525
AccII CGCG 2 cut(s) 288, 1738
AccIII TCCGGA 2 cut(s) 490, 1479
AciI CCGC 6 cut(s) 288, 834, 1520, 1621, 1624, 1738
AclWI GGATC 6 cut(s) 84, 97, 407, 796, 1076, 1430
AcoI YGGCCR 3 cut(s) 184, 838, 1190
AcsI RAATTY 3 cut(s) 304, 711, 1597
AcuI CTGAAG 5 cut(s) 192, 603, 820, 1492, 1698
AcyI GRCGYC 1 cut(s) 1279
AfaI GTAC 4 cut(s) 1053, 1410, 1527, 1648
AfiI CCNNNNNNNGG 5 cut(s) 418, 1235, 1656, 1703, 1704
AflII CTTAAG 1 cut(s) 84
AflIII ACRYGT 1 cut(s) 241
AgsI TTSAA 6 cut(s) 109, 147, 884, 987, 1368, 1718
AjuI GAANNNNNNNTTGG 2 cut(s) 1360, 1392
AleI CACNNNNGTG 1 cut(s) 1659
AluBI AGCT 7 cut(s) 7, 140, 581, 605, 941, 1092, 1143
AluI AGCT 7 cut(s) 7, 140, 581, 605, 941, 1092, 1143
AlwI GGATC 6 cut(s) 84, 97, 407, 796, 1076, 1430
Aor13HI TCCGGA 2 cut(s) 490, 1479
AoxI GGCC 5 cut(s) 98, 184, 593, 838, 1190
ApeKI GCWGC 4 cut(s) 698, 793, 941, 1047
ApoI RAATTY 3 cut(s) 304, 711, 1597
ArsI GACNNNNNNTTYG 2 cut(s) 894, 926
Asp700I GAANNNNTTC 1 cut(s) 1080
Asp718I GGTACC 1 cut(s) 1525
AspA2I CCTAGG 1 cut(s) 1529
AspLEI GCGC 3 cut(s) 288, 549, 1738
AspS9I GGNCC 4 cut(s) 593, 705, 933, 1729
AsuC2I CCSGG 1 cut(s) 786
AsuHPI GGTGA 3 cut(s) 275, 1277, 1575
AsuII TTCGAA 1 cut(s) 829
AvaII GGWCC 3 cut(s) 705, 933, 1729
AvrII CCTAGG 1 cut(s) 1529
BaeGI GKGCMC 1 cut(s) 171
BamHI GGATCC 1 cut(s) 89
BanI GGYRCC 2 cut(s) 1397, 1525
BbsI GAAGAC 3 cut(s) 264, 448, 1480
BbvCI CCTCAGC 1 cut(s) 589
BbvI GCAGC 4 cut(s) 710, 805, 928, 1034
BccI CCATC 6 cut(s) 328, 452, 660, 681, 723, 1233
BceAI ACGGC 2 cut(s) 520, 1266
BcgI CGANNNNNNTGC 2 cut(s) 1343, 1377
BcnI CCSGG 1 cut(s) 786
BfaI CTAG 3 cut(s) 42, 1134, 1530
BfmI CTRYAG 2 cut(s) 898, 1093
BfrI CTTAAG 1 cut(s) 84
BfuAI ACCTGC 2 cut(s) 305, 1116
BglII AGATCT 1 cut(s) 1467
BisI GCNGC 6 cut(s) 699, 794, 942, 1048, 1621, 1624
BlnI CCTAGG 1 cut(s) 1529
BlsI GCNGC 6 cut(s) 700, 795, 943, 1049, 1622, 1625
Bme1390I CCNGG 1 cut(s) 786
Bme18I GGWCC 3 cut(s) 705, 933, 1729
BmgT120I GGNCC 4 cut(s) 593, 705, 933, 1729
BmiI GGNNCC 4 cut(s) 91, 934, 1399, 1527
BmrFI CCNGG 1 cut(s) 786
BmrI ACTGGG 2 cut(s) 125, 1185
BmsI GCATC 6 cut(s) 398, 724, 848, 1359, 1469, 1676
BmuI ACTGGG 2 cut(s) 125, 1185
BpiI GAAGAC 3 cut(s) 264, 448, 1480
Bpu10I CCTNAGC 3 cut(s) 589, 937, 1111
Bpu14I TTCGAA 1 cut(s) 829
BpuEI CTTGAG 2 cut(s) 594, 1590
BpuMI CCSGG 1 cut(s) 786
Bsa29I ATCGAT 1 cut(s) 1353
BsaHI GRCGYC 1 cut(s) 1279
BsaJI CCNNGG 4 cut(s) 971, 1529, 1627, 1654
BsaWI WCCGGW 3 cut(s) 490, 1274, 1479
Bsc4I CCNNNNNNNGG 5 cut(s) 418, 1235, 1656, 1703, 1704
Bse118I RCCGGY 1 cut(s) 1726
Bse1I ACTGG 3 cut(s) 120, 1083, 1180
Bse3DI GCAATG 5 cut(s) 242, 511, 668, 1345, 1388
BseAI TCCGGA 2 cut(s) 490, 1479
BseCI ATCGAT 1 cut(s) 1353
BseDI CCNNGG 4 cut(s) 971, 1529, 1627, 1654
BseGI GGATG 7 cut(s) 339, 487, 739, 863, 1225, 1460, 1691
BseLI CCNNNNNNNGG 5 cut(s) 418, 1235, 1656, 1703, 1704
BseMI GCAATG 5 cut(s) 242, 511, 668, 1345, 1388
BseMII CTCAG 3 cut(s) 580, 928, 1063
BseNI ACTGG 3 cut(s) 120, 1083, 1180
BseRI GAGGAG 1 cut(s) 557
BseSI GKGCMC 1 cut(s) 171
BseXI GCAGC 4 cut(s) 710, 805, 928, 1034
BseYI CCCAGC 1 cut(s) 929
Bsh1236I CGCG 2 cut(s) 288, 1738
BshFI GGCC 5 cut(s) 100, 186, 595, 840, 1192
BshNI GGYRCC 2 cut(s) 1397, 1525
BshVI ATCGAT 1 cut(s) 1353
BsiSI CCGG 7 cut(s) 187, 491, 785, 1275, 1480, 1543, 1727
BslFI GGGAC 8 cut(s) 390, 498, 535, 683, 933, 946, 1311, 1620
BslI CCNNNNNNNGG 5 cut(s) 418, 1235, 1656, 1703, 1704
BsmFI GGGAC 8 cut(s) 390, 498, 535, 683, 933, 946, 1311, 1620
BsnI GGCC 5 cut(s) 100, 186, 595, 840, 1192
Bsp119I TTCGAA 1 cut(s) 829
Bsp1286I GDGCHC 1 cut(s) 171
Bsp13I TCCGGA 2 cut(s) 490, 1479
Bsp143I GATC 6 cut(s) 89, 399, 788, 1068, 1422, 1467
BspACI CCGC 6 cut(s) 288, 834, 1520, 1621, 1624, 1738
BspANI GGCC 5 cut(s) 100, 186, 595, 840, 1192
BspCNI CTCAG 3 cut(s) 581, 929, 1064
BspDI ATCGAT 1 cut(s) 1353
BspEI TCCGGA 2 cut(s) 490, 1479
BspFNI CGCG 2 cut(s) 288, 1738
BspLI GGNNCC 4 cut(s) 91, 934, 1399, 1527
BspMAI CTGCAG 1 cut(s) 902
BspMI ACCTGC 2 cut(s) 305, 1116
BspPI GGATC 6 cut(s) 84, 97, 407, 796, 1076, 1430
BspT104I TTCGAA 1 cut(s) 829
BspT107I GGYRCC 2 cut(s) 1397, 1525
BspTI CTTAAG 1 cut(s) 84
BsrDI GCAATG 5 cut(s) 242, 511, 668, 1345, 1388
BsrFI RCCGGY 1 cut(s) 1726
BsrI ACTGG 3 cut(s) 120, 1083, 1180
BssAI RCCGGY 1 cut(s) 1726
BssECI CCNNGG 4 cut(s) 971, 1529, 1627, 1654
BssMI GATC 6 cut(s) 89, 399, 788, 1068, 1422, 1467
BssNI GRCGYC 1 cut(s) 1279
BssT1I CCWWGG 1 cut(s) 1529
Bst4CI ACNGT 4 cut(s) 263, 909, 1097, 1417
Bst6I CTCTTC 1 cut(s) 885
BstACI GRCGYC 1 cut(s) 1279
BstAFI CTTAAG 1 cut(s) 84
BstBI TTCGAA 1 cut(s) 829
BstC8I GCNNGC 5 cut(s) 413, 1090, 1108, 1332, 1662
BstDEI CTNAG 4 cut(s) 589, 937, 1072, 1111
BstDSI CCRYGG 1 cut(s) 1654
BstF5I GGATG 7 cut(s) 339, 487, 739, 863, 1225, 1460, 1691
BstFNI CGCG 2 cut(s) 288, 1738
BstHHI GCGC 3 cut(s) 288, 549, 1738
BstKTI GATC 7 cut(s) 4, 92, 402, 791, 1071, 1425, 1470
BstMBI GATC 6 cut(s) 89, 399, 788, 1068, 1422, 1467
BstMWI GCNNNNNNNGC 3 cut(s) 18, 294, 976
BstNSI RCATGY 2 cut(s) 245, 1505
BstSCI CCNGG 1 cut(s) 784
BstSFI CTRYAG 2 cut(s) 898, 1093
BstSLI GKGCMC 1 cut(s) 171
BstUI CGCG 2 cut(s) 288, 1738
BstV1I GCAGC 4 cut(s) 710, 805, 928, 1034
BstV2I GAAGAC 3 cut(s) 264, 448, 1480
BstX2I RGATCY 3 cut(s) 89, 1068, 1467
BstXI CCANNNNNNTGG 2 cut(s) 437, 773
BstYI RGATCY 3 cut(s) 89, 1068, 1467
Bsu15I ATCGAT 1 cut(s) 1353
BsuRI GGCC 5 cut(s) 100, 186, 595, 840, 1192
BsuTUI ATCGAT 1 cut(s) 1353
BtgI CCRYGG 1 cut(s) 1654
BtsCI GGATG 7 cut(s) 339, 487, 739, 863, 1225, 1460, 1691
BtsIMutI CAGTG 3 cut(s) 401, 796, 1102
BveI ACCTGC 2 cut(s) 305, 1116
Cac8I GCNNGC 5 cut(s) 413, 1090, 1108, 1332, 1662
CfoI GCGC 3 cut(s) 288, 549, 1738
Cfr10I RCCGGY 1 cut(s) 1726
Cfr13I GGNCC 4 cut(s) 593, 705, 933, 1729
ClaI ATCGAT 1 cut(s) 1353
CseI GACGC 1 cut(s) 1287
Csp6I GTAC 4 cut(s) 1052, 1409, 1526, 1647
CviAII CATG 9 cut(s) 57, 242, 326, 623, 702, 1204, 1230, 1502, 1709
CviQI GTAC 4 cut(s) 1052, 1409, 1526, 1647
DdeI CTNAG 4 cut(s) 589, 937, 1072, 1111
DpnI GATC 7 cut(s) 3, 91, 401, 790, 1070, 1424, 1469
DpnII GATC 6 cut(s) 89, 399, 788, 1068, 1422, 1467
EaeI YGGCCR 3 cut(s) 184, 838, 1190
Eam1104I CTCTTC 1 cut(s) 885
EarI CTCTTC 1 cut(s) 885
Eco130I CCWWGG 1 cut(s) 1529
Eco32I GATATC 1 cut(s) 72
Eco47I GGWCC 3 cut(s) 705, 933, 1729
Eco57I CTGAAG 5 cut(s) 192, 603, 820, 1492, 1698
EcoO109I RGGNCCY 2 cut(s) 593, 933
EcoRV GATATC 1 cut(s) 72
EcoT14I CCWWGG 1 cut(s) 1529
EcoT22I ATGCAT 1 cut(s) 863
ErhI CCWWGG 1 cut(s) 1529
FaeI CATG 9 cut(s) 60, 245, 329, 626, 705, 1207, 1233, 1505, 1712
FaqI GGGAC 8 cut(s) 390, 498, 535, 683, 933, 946, 1311, 1620
FatI CATG 9 cut(s) 56, 241, 325, 622, 701, 1203, 1229, 1501, 1708
FauNDI CATATG 1 cut(s) 1640
Fnu4HI GCNGC 6 cut(s) 699, 794, 942, 1048, 1621, 1624
FokI GGATG 7 cut(s) 346, 474, 746, 870, 1212, 1447, 1698
Fsp4HI GCNGC 6 cut(s) 699, 794, 942, 1048, 1621, 1624
FspBI CTAG 3 cut(s) 42, 1134, 1530
GlaI GCGC 3 cut(s) 287, 548, 1737
GluI GCNGC 6 cut(s) 699, 794, 942, 1048, 1621, 1624
GsaI CCCAGC 1 cut(s) 933
HaeIII GGCC 5 cut(s) 100, 186, 595, 840, 1192
HapII CCGG 7 cut(s) 187, 491, 785, 1275, 1480, 1543, 1727
HgaI GACGC 1 cut(s) 1287
HhaI GCGC 3 cut(s) 288, 549, 1738
Hin1I GRCGYC 1 cut(s) 1279
Hin1II CATG 9 cut(s) 60, 245, 329, 626, 705, 1207, 1233, 1505, 1712
Hin6I GCGC 3 cut(s) 286, 547, 1736
HinP1I GCGC 3 cut(s) 286, 547, 1736
HincII GTYRAC 2 cut(s) 965, 1037
HindII GTYRAC 2 cut(s) 965, 1037
HinfI GANTC 7 cut(s) 52, 345, 494, 717, 1314, 1446, 1476
HpaII CCGG 7 cut(s) 187, 491, 785, 1275, 1480, 1543, 1727
HphI GGTGA 3 cut(s) 275, 1277, 1575
Hpy166II GTNNAC 5 cut(s) 816, 965, 1037, 1268, 1605
Hpy188I TCNGA 9 cut(s) 256, 452, 614, 722, 851, 1073, 1103, 1472, 1678
Hpy188III TCNNGA 7 cut(s) 222, 491, 573, 708, 1443, 1480, 1602
Hpy8I GTNNAC 5 cut(s) 816, 965, 1037, 1268, 1605
HpyAV CCTTC 6 cut(s) 216, 578, 884, 993, 1162, 1673
HpyCH4III ACNGT 4 cut(s) 263, 909, 1097, 1417
HpyCH4IV ACGT 2 cut(s) 226, 558
HpyF10VI GCNNNNNNNGC 3 cut(s) 18, 294, 976
HpyF3I CTNAG 4 cut(s) 589, 937, 1072, 1111
HpySE526I ACGT 2 cut(s) 226, 558
Hsp92I GRCGYC 1 cut(s) 1279
Hsp92II CATG 9 cut(s) 60, 245, 329, 626, 705, 1207, 1233, 1505, 1712
HspAI GCGC 3 cut(s) 286, 547, 1736
Kpn2I TCCGGA 2 cut(s) 490, 1479
KpnI GGTACC 1 cut(s) 1529
Kzo9I GATC 6 cut(s) 89, 399, 788, 1068, 1422, 1467
LmnI GCTCC 2 cut(s) 544, 1103
Lsp1109I GCAGC 4 cut(s) 710, 805, 928, 1034
LweI GCATC 6 cut(s) 398, 724, 848, 1359, 1469, 1676
MaeI CTAG 3 cut(s) 42, 1134, 1530
MaeII ACGT 2 cut(s) 226, 558
MaeIII GTNAC 2 cut(s) 44, 356
MalI GATC 7 cut(s) 3, 91, 401, 790, 1070, 1424, 1469
MboI GATC 6 cut(s) 89, 399, 788, 1068, 1422, 1467
MboII GAAGA 6 cut(s) 79, 269, 453, 872, 1192, 1485
MfeI CAATTG 1 cut(s) 516
MflI RGATCY 3 cut(s) 89, 1068, 1467
MhlI GDGCHC 1 cut(s) 171
MluCI AATT 7 cut(s) 304, 385, 516, 550, 711, 754, 1597
MlyI GAGTC 4 cut(s) 354, 726, 1455, 1470
MmeI TCCRAC 1 cut(s) 1081
Mph1103I ATGCAT 1 cut(s) 863
MroI TCCGGA 2 cut(s) 490, 1479
MroXI GAANNNNTTC 1 cut(s) 1080
MseI TTAA 5 cut(s) 85, 478, 1006, 1020, 1537
MslI CAYNNNNRTG 4 cut(s) 621, 627, 1355, 1659
MspA1I CMGCKG 1 cut(s) 1520
MspCI CTTAAG 1 cut(s) 84
MspI CCGG 7 cut(s) 187, 491, 785, 1275, 1480, 1543, 1727
MspR9I CCNGG 1 cut(s) 786
MunI CAATTG 1 cut(s) 516
MvnI CGCG 2 cut(s) 288, 1738
MwoI GCNNNNNNNGC 3 cut(s) 18, 294, 976
NciI CCSGG 1 cut(s) 786
NdeI CATATG 1 cut(s) 1640
NdeII GATC 6 cut(s) 89, 399, 788, 1068, 1422, 1467
NlaIII CATG 9 cut(s) 60, 245, 329, 626, 705, 1207, 1233, 1505, 1712
NlaIV GGNNCC 4 cut(s) 91, 934, 1399, 1527
NmeAIII GCCGAG 3 cut(s) 866, 996, 1652
NmuCI GTSAC 1 cut(s) 356
NsiI ATGCAT 1 cut(s) 863
NspI RCATGY 2 cut(s) 245, 1505
NspV TTCGAA 1 cut(s) 829
OliI CACNNNNGTG 1 cut(s) 1659
PaqCI CACCTGC 1 cut(s) 305
PciI ACATGT 1 cut(s) 241
PdmI GAANNNNTTC 1 cut(s) 1080
PfeI GAWTC 3 cut(s) 52, 494, 1314
PkrI GCNGC 6 cut(s) 700, 795, 943, 1049, 1622, 1625
PleI GAGTC 4 cut(s) 353, 725, 1454, 1470
PpsI GAGTC 4 cut(s) 353, 725, 1454, 1470
PpuMI RGGWCCY 1 cut(s) 933
PscI ACATGT 1 cut(s) 241
Psp5II RGGWCCY 1 cut(s) 933
PspFI CCCAGC 1 cut(s) 929
PspN4I GGNNCC 4 cut(s) 91, 934, 1399, 1527
PspPI GGNCC 4 cut(s) 593, 705, 933, 1729
PspPPI RGGWCCY 1 cut(s) 933
PstI CTGCAG 1 cut(s) 902
PsuI RGATCY 3 cut(s) 89, 1068, 1467
RsaI GTAC 4 cut(s) 1053, 1410, 1527, 1648
RsaNI GTAC 4 cut(s) 1052, 1409, 1526, 1647
RseI CAYNNNNRTG 4 cut(s) 621, 627, 1355, 1659
SaqAI TTAA 5 cut(s) 85, 478, 1006, 1020, 1537
SatI GCNGC 6 cut(s) 699, 794, 942, 1048, 1621, 1624
Sau3AI GATC 6 cut(s) 89, 399, 788, 1068, 1422, 1467
Sau96I GGNCC 4 cut(s) 593, 705, 933, 1729
SchI GAGTC 4 cut(s) 354, 726, 1455, 1470
ScrFI CCNGG 1 cut(s) 786
SduI GDGCHC 1 cut(s) 171
SfaNI GCATC 6 cut(s) 398, 724, 848, 1359, 1469, 1676
SfcI CTRYAG 2 cut(s) 898, 1093
SfuI TTCGAA 1 cut(s) 829
SinI GGWCC 3 cut(s) 705, 933, 1729
SmiMI CAYNNNNRTG 4 cut(s) 621, 627, 1355, 1659
SmlI CTYRAG 3 cut(s) 84, 573, 1569
SmoI CTYRAG 3 cut(s) 84, 573, 1569
Sse9I AATT 7 cut(s) 304, 385, 516, 550, 711, 754, 1597
SsiI CCGC 6 cut(s) 288, 834, 1520, 1621, 1624, 1738
SspI AATATT 1 cut(s) 1486
SspMI CTAG 3 cut(s) 42, 1134, 1530
StyD4I CCNGG 1 cut(s) 784
StyI CCWWGG 1 cut(s) 1529
TaaI ACNGT 4 cut(s) 263, 909, 1097, 1417
TaiI ACGT 2 cut(s) 229, 561
TaqI TCGA 4 cut(s) 61, 829, 1155, 1353
TaqII GACCGA 1 cut(s) 501
TasI AATT 7 cut(s) 304, 385, 516, 550, 711, 754, 1597
TauI GCSGC 2 cut(s) 1623, 1626
TfiI GAWTC 3 cut(s) 52, 494, 1314
Tru1I TTAA 5 cut(s) 85, 478, 1006, 1020, 1537
Tru9I TTAA 5 cut(s) 85, 478, 1006, 1020, 1537
TscAI CASTG 3 cut(s) 401, 803, 1102
TseFI GTSAC 1 cut(s) 356
TseI GCWGC 4 cut(s) 698, 793, 941, 1047
Tsp45I GTSAC 1 cut(s) 356
TspDTI ATGAA 4 cut(s) 1038, 1399, 1609, 1725
TspRI CASTG 3 cut(s) 401, 803, 1102
Vha464I CTTAAG 1 cut(s) 84
VpaK11BI GGWCC 3 cut(s) 705, 933, 1729
XapI RAATTY 3 cut(s) 304, 711, 1597
XceI RCATGY 2 cut(s) 245, 1505
XmaJI CCTAGG 1 cut(s) 1529
XmnI GAANNNNTTC 1 cut(s) 1080
XspI CTAG 3 cut(s) 42, 1134, 1530
Zsp2I ATGCAT 1 cut(s) 863
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.