Rh7CG369900

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0000030
Physical Location & Seq
Forward (+)
46529508 .. 46532692
3185 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG369900.1

Sequence Viewer

Length: 1953 bp
ATGGAAGACGGAGGTAAGAGAGGTGTGGATGATTGTGGAAGGAGGAAAGCAGTGCATTTTATGATTGACAAGGAAACCAAAACCAATGGCCAGAAGTCGAAAAACAGATTGTATGAGGAAGAAAATAAGGTCATTGACACCGCCGTTGAAGTGGCAAGTGACAAAGCAGTTGATGACTGCAAGACAGTCCCTAGTTTTAACGAAGCATCAGAGAATGAGGTTACCATCCGAACAGCATTGCGTGGACAACACTTCAGAAGGACTATGTCTTCCCTGTCTGAGCAGAAGATACTTGCGACATATGAAATGGGGTTTGGGACACTGCACCAAATCTGCTGTACGAAATTGAACCTCCCATTGTGCCAAATGTTGGTTGAAAATTTTGACGTTGCCAACTCATGCATCAAGATACACGGGAGGAACAAGACAGTGACTGAGGAAGACTTTAGGCGCATCATGGGAGTCAGAGGTGGAGGGTGTGATGTGGACTTTGAAGGAAGCACCGTTGAGCATGAAATTTTGGTGCTGAAGAGGGAGATAGCAGGGAAGGAGAGCGAGATAACCATAGGTGGACTGAGTAGGTTGCTCGTTGAATCTGAATTCGTTGATGACACATATAAGGTCGGCTTTGCCTTGTATGCGCTAGCAACTCTGTTATGCCTAGTAACGGGAGCCCACGTGGATGAACGATACCTTATACCATTGAAGGATCTAGGTGCACTGTCTTCCAAAAACTGGGCAAAGCTTGCATTTGTGAAGTTGGTTGAAAGGGTGTCATCGTTTCAGGCGCTCGGTTATGGTGTAGTAGGAGGTTGCATTCTATTCCTTCAATTGTTCTACCTGGACGTTGTCGGTAAAGGGATTCTACTATTTCCTAGGATTTATAACCCGGTGATGACTTGGGGCAAGAAGGAGATAAACAGGGTTCTGGAAGAAGTTGAGAGGGAGGGCGGATTTAGATGCGAGAATGTGCGTGTAACGAAAAAGAACATCTTTGACACGACCCATCAAATGTCGGGATCCGTTGATGCTAGTACAGGGATAAGAACTACTGTAGTCGAGGACTTGTCAGAAGTGAGGTCTGATGTAGGTACTGTGAGAGGGGAGGTAGAAAATTTCAAGTCAACCGTTGGTCGTTTGGAACCAGACATGGGCCGGTTAAGGAGTGCAATTCTGAGGCTAGAAACATCTCTTGGGAAACTGAAGGCTAAGGGTATTGGCCAAATTGTGGCAGAGGTGATTAAGGAAGTTTTTGAGGACCTCCATAAGGAGTACACTGGTAATGAAGAGAAGAATGGTTTTGTCACTGGTCAGAAGCAGCACCACACAGAAGCTGGTCTACATCATGTTGAGATGTGGCAAAGTAAATCTGACATTCGTGTGCGTAATTTCGTACACTTTAGTAAGCATCCTTCCACTGTCTCTAAGCCTGGTCACGCAAATGTTGAATTAAGTTTGGATTTCTTTCATGACAACAACGAGGTTGCTAGGTGCGAGGGATGGGCTGTCTCTCGCTGGGATCTGAGCTGCTTGTCACCAATGCAGTGCTTGAGTTGTGAGGTTGTGAACATAACTGCTGCTTACTTGTTTGATCGGGGATCCGACAACTGGTTCATGCCTACTTCACTTTCTGAACTTGCGAAGGAGTGTTCATCAGGGATGCAGGTTCAAGGGGTTGTGCCTTCTACCATTAAAATGTGCCAATTGAGAAGATTCGTTGGTAGATTCTTGTCATGCCAGAAGATGTCACTAGTTGAAAAGGTTTTTGCCAACAATATTCGAATGTCACCTGCCATATATGCAAAGTTTGGGTCTTTCTCCATCACGTATCCAGAAAGAAGCCCTATCCATCCCACTAGCCAAGACTCGGGAATTTTTGTCATTAGAAACATGCAGTTTTACCACCAGCGCTGGTACCAAGGGGTGAGTATTGACATGAACCAGGTTATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

650

Amino Acids

73.07

Weight (kDa)

6.82

Isoelectric Point (pI)

39.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 885
AarI CACCTGC 1 cut(s) 1798
Acc36I ACCTGC 2 cut(s) 1654, 1798
Acc65I GGTACC 1 cut(s) 1914
AccB1I GGYRCC 1 cut(s) 1914
AccB7I CCANNNNNTGG 3 cut(s) 370, 735, 1228
AccI GTMKAC 1 cut(s) 1339
AciI CCGC 2 cut(s) 141, 951
AclWI GGATC 6 cut(s) 717, 1014, 1027, 1527, 1593, 1606
AcoI YGGCCR 2 cut(s) 88, 1219
AcsI RAATTY 5 cut(s) 379, 516, 599, 1114, 1872
AcuI CTGAAG 3 cut(s) 238, 548, 1223
AcvI CACGTG 1 cut(s) 679
AfaI GTAC 6 cut(s) 340, 1036, 1093, 1274, 1395, 1916
AfeI AGCGCT 1 cut(s) 1910
AfiI CCNNNNNNNGG 8 cut(s) 370, 667, 735, 1151, 1228, 1267, 1608, 1867
AhlI ACTAGT 1 cut(s) 1750
AjnI CCWGG 3 cut(s) 840, 1429, 1941
AjuI GAANNNNNNNTTGG 4 cut(s) 297, 329, 1176, 1208
AluBI AGCT 3 cut(s) 745, 1334, 1527
AluI AGCT 3 cut(s) 745, 1334, 1527
Alw21I GWGCWC 1 cut(s) 721
Alw26I GTCTC 2 cut(s) 1426, 1513
Alw44I GTGCAC 1 cut(s) 717
AlwI GGATC 6 cut(s) 717, 1014, 1027, 1527, 1593, 1606
AlwNI CAGNNNCTG 2 cut(s) 434, 1334
Ama87I CYCGRG 1 cut(s) 1867
Aor51HI AGCGCT 1 cut(s) 1910
AoxI GGCC 3 cut(s) 88, 1153, 1219
ApaLI GTGCAC 1 cut(s) 717
ApeKI GCWGC 3 cut(s) 1318, 1527, 1577
ApoI RAATTY 5 cut(s) 379, 516, 599, 1114, 1872
ArsI GACNNNNNNTTYG 2 cut(s) 1796, 1828
Asp718I GGTACC 1 cut(s) 1914
AspA2I CCTAGG 1 cut(s) 875
AspLEI GCGC 4 cut(s) 453, 643, 790, 1911
AspS9I GGNCC 2 cut(s) 1153, 1258
AsuC2I CCSGG 1 cut(s) 890
AsuHPI GGTGA 5 cut(s) 904, 1249, 1527, 1779, 1936
AsuII TTCGAA 1 cut(s) 1780
AsuNHI GCTAGC 1 cut(s) 643
AvaI CYCGRG 1 cut(s) 1867
AvaII GGWCC 1 cut(s) 1258
AvrII CCTAGG 1 cut(s) 875
BaeGI GKGCMC 1 cut(s) 721
BalI TGGCCA 2 cut(s) 90, 1221
BamHI GGATCC 2 cut(s) 1019, 1598
BanI GGYRCC 1 cut(s) 1914
BanII GRGCYC 1 cut(s) 676
BarI GAAGNNNNNNTAC 4 cut(s) 1323, 1355, 1396, 1428
BbrPI CACGTG 1 cut(s) 679
BbsI GAAGAC 4 cut(s) 12, 261, 447, 717
Bbv12I GWGCWC 1 cut(s) 721
BbvI GCAGC 3 cut(s) 1330, 1514, 1564
BccI CCATC 5 cut(s) 233, 1014, 1494, 1829, 1857
BceAI ACGGC 1 cut(s) 128
BciT130I CCWGG 3 cut(s) 842, 1431, 1943
BciVI GTATCC 1 cut(s) 1839
BcnI CCSGG 1 cut(s) 890
BcoDI GTCTC 2 cut(s) 1426, 1513
BcuI ACTAGT 1 cut(s) 1750
BfmI CTRYAG 1 cut(s) 1053
BfoI RGCGCY 2 cut(s) 791, 1912
BfuAI ACCTGC 2 cut(s) 1654, 1798
BfuI GTATCC 1 cut(s) 1839
BisI GCNGC 3 cut(s) 1319, 1528, 1578
BlnI CCTAGG 1 cut(s) 875
BlsI GCNGC 3 cut(s) 1320, 1529, 1579
Bme1390I CCNGG 4 cut(s) 842, 890, 1431, 1943
Bme18I GGWCC 1 cut(s) 1258
BmeT110I CYCGRG 1 cut(s) 1867
BmgT120I GGNCC 2 cut(s) 1153, 1258
BmiI GGNNCC 5 cut(s) 673, 1021, 1143, 1600, 1916
BmrFI CCNGG 4 cut(s) 842, 890, 1431, 1943
BmrI ACTGGG 1 cut(s) 745
BmsI GCATC 7 cut(s) 215, 411, 462, 950, 1018, 1417, 1650
BmtI GCTAGC 1 cut(s) 647
BmuI ACTGGG 1 cut(s) 745
BpiI GAAGAC 4 cut(s) 12, 261, 447, 717
Bpu10I CCTNAGC 1 cut(s) 1209
Bpu14I TTCGAA 1 cut(s) 1780
BpuEI CTTGAG 1 cut(s) 1570
BpuMI CCSGG 1 cut(s) 890
BsaAI YACGTR 2 cut(s) 679, 1827
BsaJI CCNNGG 2 cut(s) 875, 1918
BsaXI ACNNNNNCTCC 2 cut(s) 663, 693
Bsc4I CCNNNNNNNGG 8 cut(s) 370, 667, 735, 1151, 1228, 1267, 1608, 1867
Bse118I RCCGGY 1 cut(s) 1155
Bse1I ACTGG 4 cut(s) 740, 1282, 1312, 1613
Bse3DI GCAATG 1 cut(s) 236
BseBI CCWGG 3 cut(s) 842, 1431, 1943
BseDI CCNNGG 2 cut(s) 875, 1918
BseGI GGATG 7 cut(s) 34, 225, 688, 1408, 1505, 1665, 1849
BseLI CCNNNNNNNGG 8 cut(s) 370, 667, 735, 1151, 1228, 1267, 1608, 1867
BseMI GCAATG 1 cut(s) 236
BseMII CTCAG 5 cut(s) 270, 426, 566, 1166, 1514
BseNI ACTGG 4 cut(s) 740, 1282, 1312, 1613
BseSI GKGCMC 1 cut(s) 721
BseXI GCAGC 3 cut(s) 1330, 1514, 1564
BseYI CCCAGC 1 cut(s) 1515
BsgI GTGCAG 1 cut(s) 308
BshFI GGCC 3 cut(s) 90, 1155, 1221
BshNI GGYRCC 1 cut(s) 1914
BsiHKAI GWGCWC 1 cut(s) 721
BsiHKCI CYCGRG 1 cut(s) 1867
BsiSI CCGG 2 cut(s) 890, 1156
BslFI GGGAC 2 cut(s) 173, 331
BslI CCNNNNNNNGG 8 cut(s) 370, 667, 735, 1151, 1228, 1267, 1608, 1867
BsmAI GTCTC 2 cut(s) 1426, 1513
BsmFI GGGAC 2 cut(s) 173, 331
BsmI GAATGC 1 cut(s) 816
BsnI GGCC 3 cut(s) 90, 1155, 1221
BsoBI CYCGRG 1 cut(s) 1867
Bsp119I TTCGAA 1 cut(s) 1780
Bsp1286I GDGCHC 2 cut(s) 676, 721
Bsp143I GATC 5 cut(s) 709, 1019, 1519, 1591, 1598
BspACI CCGC 2 cut(s) 141, 951
BspANI GGCC 3 cut(s) 90, 1155, 1221
BspCNI CTCAG 5 cut(s) 271, 427, 567, 1167, 1515
BspHI TCATGA 1 cut(s) 1468
BspLI GGNNCC 5 cut(s) 673, 1021, 1143, 1600, 1916
BspMI ACCTGC 2 cut(s) 1654, 1798
BspOI GCTAGC 1 cut(s) 647
BspPI GGATC 6 cut(s) 717, 1014, 1027, 1527, 1593, 1606
BspT104I TTCGAA 1 cut(s) 1780
BspT107I GGYRCC 1 cut(s) 1914
BsrDI GCAATG 1 cut(s) 236
BsrFI RCCGGY 1 cut(s) 1155
BsrI ACTGG 4 cut(s) 740, 1282, 1312, 1613
BssAI RCCGGY 1 cut(s) 1155
BssECI CCNNGG 2 cut(s) 875, 1918
BssMI GATC 5 cut(s) 709, 1019, 1519, 1591, 1598
BssT1I CCWWGG 2 cut(s) 875, 1918
Bst2UI CCWGG 3 cut(s) 842, 1431, 1943
Bst4CI ACNGT 8 cut(s) 187, 430, 505, 723, 1054, 1096, 1129, 1420
Bst6I CTCTTC 2 cut(s) 524, 1281
BstAPI GCANNNNNTGC 1 cut(s) 746
BstBAI YACGTR 2 cut(s) 679, 1827
BstBI TTCGAA 1 cut(s) 1780
BstC8I GCNNGC 2 cut(s) 645, 747
BstDEI CTNAG 7 cut(s) 279, 435, 575, 1175, 1209, 1425, 1523
BstEII GGTNACC 1 cut(s) 220
BstENI CCTNNNNNAGG 1 cut(s) 1265
BstF5I GGATG 7 cut(s) 34, 225, 688, 1408, 1505, 1665, 1849
BstH2I RGCGCY 2 cut(s) 791, 1912
BstHHI GCGC 4 cut(s) 453, 643, 790, 1911
BstKTI GATC 5 cut(s) 712, 1022, 1522, 1594, 1601
BstMAI GTCTC 2 cut(s) 1426, 1513
BstMBI GATC 5 cut(s) 709, 1019, 1519, 1591, 1598
BstMWI GCNNNNNNNGC 3 cut(s) 638, 746, 1799
BstNI CCWGG 3 cut(s) 842, 1431, 1943
BstNSI RCATGY 1 cut(s) 1894
BstPI GGTNACC 1 cut(s) 220
BstSCI CCNGG 4 cut(s) 840, 888, 1429, 1941
BstSFI CTRYAG 1 cut(s) 1053
BstSLI GKGCMC 1 cut(s) 721
BstV1I GCAGC 3 cut(s) 1330, 1514, 1564
BstV2I GAAGAC 4 cut(s) 12, 261, 447, 717
BstX2I RGATCY 4 cut(s) 709, 1019, 1519, 1598
BstYI RGATCY 4 cut(s) 709, 1019, 1519, 1598
BsuI GTATCC 1 cut(s) 1839
BsuRI GGCC 3 cut(s) 90, 1155, 1221
BtsCI GGATG 7 cut(s) 34, 225, 688, 1408, 1505, 1665, 1849
BtsI GCAGTG 3 cut(s) 57, 320, 1550
BtsIMutI CAGTG 8 cut(s) 57, 320, 435, 719, 1275, 1305, 1416, 1550
BveI ACCTGC 2 cut(s) 1654, 1798
Cac8I GCNNGC 2 cut(s) 645, 747
CaiI CAGNNNCTG 2 cut(s) 434, 1334
CciI TCATGA 1 cut(s) 1468
CfoI GCGC 4 cut(s) 453, 643, 790, 1911
Cfr10I RCCGGY 1 cut(s) 1155
Cfr13I GGNCC 2 cut(s) 1153, 1258
CsiI ACCWGGT 1 cut(s) 1941
Csp6I GTAC 6 cut(s) 339, 1035, 1092, 1273, 1394, 1915
CviQI GTAC 6 cut(s) 339, 1035, 1092, 1273, 1394, 1915
DdeI CTNAG 7 cut(s) 279, 435, 575, 1175, 1209, 1425, 1523
DpnI GATC 5 cut(s) 711, 1021, 1521, 1593, 1600
DpnII GATC 5 cut(s) 709, 1019, 1519, 1591, 1598
EaeI YGGCCR 2 cut(s) 88, 1219
Eam1104I CTCTTC 2 cut(s) 524, 1281
EarI CTCTTC 2 cut(s) 524, 1281
EciI GGCGGA 1 cut(s) 966
Eco130I CCWWGG 2 cut(s) 875, 1918
Eco24I GRGCYC 1 cut(s) 676
Eco47I GGWCC 1 cut(s) 1258
Eco47III AGCGCT 1 cut(s) 1910
Eco57I CTGAAG 3 cut(s) 238, 548, 1223
Eco72I CACGTG 1 cut(s) 679
Eco88I CYCGRG 1 cut(s) 1867
Eco91I GGTNACC 1 cut(s) 220
EcoNI CCTNNNNNAGG 1 cut(s) 1265
EcoO109I RGGNCCY 1 cut(s) 1258
EcoO65I GGTNACC 1 cut(s) 220
EcoRI GAATTC 1 cut(s) 599
EcoRII CCWGG 3 cut(s) 840, 1429, 1941
EcoT14I CCWWGG 2 cut(s) 875, 1918
EcoT22I ATGCAT 1 cut(s) 404
EcoT38I GRGCYC 1 cut(s) 676
ErhI CCWWGG 2 cut(s) 875, 1918
FalI AAGNNNNNCTT 4 cut(s) 611, 643, 977, 1009
FaqI GGGAC 2 cut(s) 173, 331
FauNDI CATATG 1 cut(s) 301
FblI GTMKAC 1 cut(s) 1339
Fnu4HI GCNGC 3 cut(s) 1319, 1528, 1578
FokI GGATG 7 cut(s) 41, 212, 695, 1395, 1512, 1672, 1836
FriOI GRGCYC 1 cut(s) 676
Fsp4HI GCNGC 3 cut(s) 1319, 1528, 1578
GlaI GCGC 4 cut(s) 452, 642, 789, 1910
GluI GCNGC 3 cut(s) 1319, 1528, 1578
GsaI CCCAGC 1 cut(s) 1519
HaeII RGCGCY 2 cut(s) 791, 1912
HaeIII GGCC 3 cut(s) 90, 1155, 1221
HapII CCGG 2 cut(s) 890, 1156
HhaI GCGC 4 cut(s) 453, 643, 790, 1911
Hin6I GCGC 4 cut(s) 451, 641, 788, 1909
HinP1I GCGC 4 cut(s) 451, 641, 788, 1909
HincII GTYRAC 1 cut(s) 1125
HindII GTYRAC 1 cut(s) 1125
HindIII AAGCTT 1 cut(s) 743
HinfI GANTC 6 cut(s) 462, 593, 862, 1713, 1725, 1865
HpaII CCGG 2 cut(s) 890, 1156
HphI GGTGA 5 cut(s) 904, 1249, 1527, 1779, 1936
Hpy166II GTNNAC 9 cut(s) 245, 487, 572, 719, 1125, 1275, 1340, 1396, 1567
Hpy188III TCNNGA 6 cut(s) 406, 929, 1017, 1469, 1832, 1869
Hpy8I GTNNAC 9 cut(s) 245, 487, 572, 719, 1125, 1275, 1340, 1396, 1567
HpyCH4III ACNGT 8 cut(s) 187, 430, 505, 723, 1054, 1096, 1129, 1420
HpyCH4IV ACGT 4 cut(s) 387, 678, 846, 1826
HpyF10VI GCNNNNNNNGC 3 cut(s) 638, 746, 1799
HpyF3I CTNAG 7 cut(s) 279, 435, 575, 1175, 1209, 1425, 1523
HpySE526I ACGT 4 cut(s) 387, 678, 846, 1826
HspAI GCGC 4 cut(s) 451, 641, 788, 1909
KpnI GGTACC 1 cut(s) 1918
Kzo9I GATC 5 cut(s) 709, 1019, 1519, 1591, 1598
LmnI GCTCC 1 cut(s) 671
Lsp1109I GCAGC 3 cut(s) 1330, 1514, 1564
LweI GCATC 7 cut(s) 215, 411, 462, 950, 1018, 1417, 1650
MabI ACCWGGT 1 cut(s) 1941
MaeII ACGT 4 cut(s) 387, 678, 846, 1826
MalI GATC 5 cut(s) 711, 1021, 1521, 1593, 1600
MboI GATC 5 cut(s) 709, 1019, 1519, 1591, 1598
MfeI CAATTG 2 cut(s) 830, 1703
MflI RGATCY 4 cut(s) 709, 1019, 1519, 1598
MhlI GDGCHC 2 cut(s) 676, 721
MlsI TGGCCA 2 cut(s) 90, 1221
MluNI TGGCCA 2 cut(s) 90, 1221
MlyI GAGTC 2 cut(s) 471, 1859
MmeI TCCRAC 1 cut(s) 1626
Mox20I TGGCCA 2 cut(s) 90, 1221
Mph1103I ATGCAT 1 cut(s) 404
MscI TGGCCA 2 cut(s) 90, 1221
MseI TTAA 5 cut(s) 198, 1160, 1242, 1451, 1692
MslI CAYNNNNRTG 4 cut(s) 681, 1379, 1440, 1694
Msp20I TGGCCA 2 cut(s) 90, 1221
MspI CCGG 2 cut(s) 890, 1156
MspR9I CCNGG 4 cut(s) 842, 890, 1431, 1943
MunI CAATTG 2 cut(s) 830, 1703
Mva1269I GAATGC 1 cut(s) 816
MvaI CCWGG 3 cut(s) 842, 1431, 1943
MwoI GCNNNNNNNGC 3 cut(s) 638, 746, 1799
NciI CCSGG 1 cut(s) 890
NdeI CATATG 1 cut(s) 301
NdeII GATC 5 cut(s) 709, 1019, 1519, 1591, 1598
NheI GCTAGC 1 cut(s) 643
NlaIV GGNNCC 5 cut(s) 673, 1021, 1143, 1600, 1916
NmuCI GTSAC 7 cut(s) 158, 430, 1303, 1433, 1533, 1746, 1785
NsiI ATGCAT 1 cut(s) 404
NspI RCATGY 1 cut(s) 1894
NspV TTCGAA 1 cut(s) 1780
PagI TCATGA 1 cut(s) 1468
PaqCI CACCTGC 1 cut(s) 1798
PctI GAATGC 1 cut(s) 816
PfeI GAWTC 4 cut(s) 593, 862, 1713, 1725
PflFI GACNNNGTC 2 cut(s) 265, 848
PflMI CCANNNNNTGG 3 cut(s) 370, 735, 1228
PkrI GCNGC 3 cut(s) 1320, 1529, 1579
PleI GAGTC 2 cut(s) 470, 1859
PmaCI CACGTG 1 cut(s) 679
PmlI CACGTG 1 cut(s) 679
PpsI GAGTC 2 cut(s) 470, 1859
Ppu21I YACGTR 2 cut(s) 679, 1827
PpuMI RGGWCCY 1 cut(s) 1258
PsiI TTATAA 1 cut(s) 885
Psp5II RGGWCCY 1 cut(s) 1258
Psp6I CCWGG 3 cut(s) 840, 1429, 1941
PspCI CACGTG 1 cut(s) 679
PspEI GGTNACC 1 cut(s) 220
PspFI CCCAGC 1 cut(s) 1515
PspGI CCWGG 3 cut(s) 840, 1429, 1941
PspN4I GGNNCC 5 cut(s) 673, 1021, 1143, 1600, 1916
PspPI GGNCC 2 cut(s) 1153, 1258
PspPPI RGGWCCY 1 cut(s) 1258
PstNI CAGNNNCTG 2 cut(s) 434, 1334
PsuI RGATCY 4 cut(s) 709, 1019, 1519, 1598
PsyI GACNNNGTC 2 cut(s) 265, 848
RsaI GTAC 6 cut(s) 340, 1036, 1093, 1274, 1395, 1916
RsaNI GTAC 6 cut(s) 339, 1035, 1092, 1273, 1394, 1915
RseI CAYNNNNRTG 4 cut(s) 681, 1379, 1440, 1694
SaqAI TTAA 5 cut(s) 198, 1160, 1242, 1451, 1692
SatI GCNGC 3 cut(s) 1319, 1528, 1578
Sau3AI GATC 5 cut(s) 709, 1019, 1519, 1591, 1598
Sau96I GGNCC 2 cut(s) 1153, 1258
SchI GAGTC 2 cut(s) 471, 1859
ScrFI CCNGG 4 cut(s) 842, 890, 1431, 1943
SduI GDGCHC 2 cut(s) 676, 721
SexAI ACCWGGT 1 cut(s) 1941
SfaNI GCATC 7 cut(s) 215, 411, 462, 950, 1018, 1417, 1650
SfcI CTRYAG 1 cut(s) 1053
SfuI TTCGAA 1 cut(s) 1780
SinI GGWCC 1 cut(s) 1258
SmiMI CAYNNNNRTG 4 cut(s) 681, 1379, 1440, 1694
SmlI CTYRAG 1 cut(s) 1549
SmoI CTYRAG 1 cut(s) 1549
SpeI ACTAGT 1 cut(s) 1750
SsiI CCGC 2 cut(s) 141, 951
SspI AATATT 1 cut(s) 1777
StyD4I CCNGG 4 cut(s) 840, 888, 1429, 1941
StyI CCWWGG 2 cut(s) 875, 1918
TaaI ACNGT 8 cut(s) 187, 430, 505, 723, 1054, 1096, 1129, 1420
TaiI ACGT 4 cut(s) 390, 681, 849, 1829
TaqI TCGA 3 cut(s) 98, 1059, 1780
TatI WGTACW 2 cut(s) 1034, 1272
TfiI GAWTC 4 cut(s) 593, 862, 1713, 1725
Tru1I TTAA 5 cut(s) 198, 1160, 1242, 1451, 1692
Tru9I TTAA 5 cut(s) 198, 1160, 1242, 1451, 1692
TscAI CASTG 8 cut(s) 57, 327, 435, 726, 1282, 1312, 1423, 1550
TseFI GTSAC 7 cut(s) 158, 430, 1303, 1433, 1533, 1746, 1785
TseI GCWGC 3 cut(s) 1318, 1527, 1577
Tsp45I GTSAC 7 cut(s) 158, 430, 1303, 1433, 1533, 1746, 1785
TspDTI ATGAA 8 cut(s) 318, 528, 699, 1299, 1457, 1603, 1641, 1952
TspGWI ACGGA 2 cut(s) 24, 1012
TspRI CASTG 8 cut(s) 57, 327, 435, 726, 1282, 1312, 1423, 1550
Tth111I GACNNNGTC 2 cut(s) 265, 848
Van91I CCANNNNNTGG 3 cut(s) 370, 735, 1228
VneI GTGCAC 1 cut(s) 717
VpaK11BI GGWCC 1 cut(s) 1258
XagI CCTNNNNNAGG 1 cut(s) 1265
XapI RAATTY 5 cut(s) 379, 516, 599, 1114, 1872
XceI RCATGY 1 cut(s) 1894
XcmI CCANNNNNNNNNTGG 1 cut(s) 1331
XmaJI CCTAGG 1 cut(s) 875
XmiI GTMKAC 1 cut(s) 1339
Zsp2I ATGCAT 1 cut(s) 404
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.