Rh2CG300200

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000030
Physical Location & Seq
Reverse (-)
34801261 .. 34804149
2889 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG300200.1

Sequence Viewer

Length: 1281 bp
ATGGGCGTAAGGAATGGAGGTTGTGATGTGGAGATTGAAGGAAACACTGAGGACCCTGATATTTTGGCCATGGAGAGGAAGATTTCGGGGAAAGAGAATCAAATAACAATACATGGATTGAGGAGGGTGCTCATTGAATCTGAAAGCGCTGATGAGACATTTAGGATCAGCTTTGCCTTAACAATTCAGTACAGTGGATCGGTTGATGCCAGCACAGGGATAAAAACCAATGTGGTGGAAGACTTGTCAGAAGTGAGGTCTGAGGTGGGCGTTGTTAAAGGGGACATCGAGAATCTGAAGTCAATAGTCGGTCGATTGGAACCGGATATGGGCCGTTTGAGAAGAGCAATTATGATGTTAGAAACATCACTTGATAAGCTAAAGGCTGAAGGCCTCTCCCAGCTTGTGTCAGACGCTATAAAAGGAGTGTTTGAGGATAAGCAGAGTGATTATGTTGGCAACGATGGGAGTGATGATTTTGCTGATGGTCAAAAGCAGCAGGGTCCAGAAGTTGAGTCAGATGACGATGGGATGCCTAATGCTGAGTCAAAAATTGTCATATCCAATGAGGTGGTACCATACCTGGATCACAGAACTGAAAATGATAGAAGTGAACAGACGAGGTTCCAAGCAGTGGCCGAGATTTTGCAGAGGGATTCATACTTACTGACCTATCTCTTCAGCAAGAAGGTTTCTGCGGATGACAGTTTCGGGAGCGGATCCGAGAACTGGTTCTTGCCAGCTACAATCTCCATGTTCTTCCCCATCCACGACGGGGTGCTGAAGCGTTGGTTTTTGGCTGTCGTTAACATACCGGATGGTGAGTGTGAAATATGGGACAGCAACCCCGTTGATACTACCATGACACGCAGGCAAGAATATGCCATTGCAACAATATCTTTGATTGAAAAAATATTTGGCAACGAACTGCGAATGTTGCCTGACCTGTATGCACAGTTTGTATCATTCACCATTACTTATCCGGAGAGAGGCGCTCTACATCCCAGGTCCGAAGACTCGAGAATATTTGTGATAAGGAACATGCAGTTTTACCGACAGCGCTGGTACCTAGGGTTTAACTCCGGTGACCAGAGGGTTCGTATGGCACTTGAGATTGTCAATCACCCTAGGAATGAAATTCTTGAACAGGTCTGGCTTGCTGCTGTAGAGGAAGTCCCATATGATGTACCTACTACGGGCGTGCCACCACTATCTCGAAAGGAGGATACAGTTCTGCCAACATCGGGCATGCCACCCAACCCACGCCAGTCAAGGTGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

426

Amino Acids

47.99

Weight (kDa)

4.71

Isoelectric Point (pI)

52.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 574, 1065
AccB1I GGYRCC 2 cut(s) 574, 1065
AccB7I CCANNNNNTGG 1 cut(s) 634
AccBSI CCGCTC 1 cut(s) 717
AccIII TCCGGA 1 cut(s) 982
AciI CCGC 2 cut(s) 698, 717
AclWI GGATC 5 cut(s) 173, 205, 594, 714, 727
AcoI YGGCCR 2 cut(s) 66, 636
AcsI RAATTY 1 cut(s) 1137
AcuI CTGAAG 4 cut(s) 317, 408, 664, 803
AfaI GTAC 4 cut(s) 191, 576, 1067, 1188
AfeI AGCGCT 2 cut(s) 148, 1061
AfiI CCNNNNNNNGG 9 cut(s) 75, 216, 329, 634, 729, 775, 989, 1196, 1244
AgsI TTSAA 4 cut(s) 38, 137, 908, 1145
AjnI CCWGG 2 cut(s) 582, 1004
AjuI GAANNNNNNNTTGG 2 cut(s) 900, 932
AluBI AGCT 4 cut(s) 171, 379, 403, 743
AluI AGCT 4 cut(s) 171, 379, 403, 743
Alw21I GWGCWC 1 cut(s) 132
Alw26I GTCTC 1 cut(s) 149
AlwI GGATC 5 cut(s) 173, 205, 594, 714, 727
Ama87I CYCGRG 1 cut(s) 1018
Aor13HI TCCGGA 1 cut(s) 982
Aor51HI AGCGCT 2 cut(s) 148, 1061
AoxI GGCC 4 cut(s) 66, 331, 391, 636
ApeKI GCWGC 2 cut(s) 496, 1160
ApoI RAATTY 1 cut(s) 1137
Asp700I GAANNNNTTC 1 cut(s) 731
Asp718I GGTACC 2 cut(s) 574, 1065
AspA2I CCTAGG 2 cut(s) 1069, 1127
AspLEI GCGC 3 cut(s) 149, 995, 1062
AspS9I GGNCC 4 cut(s) 52, 331, 503, 1008
AsuHPI GGTGA 4 cut(s) 833, 961, 1097, 1115
AvaI CYCGRG 1 cut(s) 1018
AvaII GGWCC 3 cut(s) 52, 503, 1008
AvrII CCTAGG 2 cut(s) 1069, 1127
BalI TGGCCA 1 cut(s) 68
BamHI GGATCC 1 cut(s) 719
BanI GGYRCC 2 cut(s) 574, 1065
BbsI GAAGAC 2 cut(s) 246, 1020
Bbv12I GWGCWC 1 cut(s) 132
BbvI GCAGC 2 cut(s) 508, 1147
BccI CCATC 5 cut(s) 458, 479, 521, 773, 812
BceAI ACGGC 1 cut(s) 318
BciT130I CCWGG 2 cut(s) 584, 1006
BciVI GTATCC 1 cut(s) 1219
BcoDI GTCTC 1 cut(s) 149
BfaI CTAG 2 cut(s) 1070, 1128
BfmI CTRYAG 1 cut(s) 1164
BfoI RGCGCY 3 cut(s) 150, 996, 1063
BfuI GTATCC 1 cut(s) 1219
BisI GCNGC 2 cut(s) 497, 1161
BlnI CCTAGG 2 cut(s) 1069, 1127
BlsI GCNGC 2 cut(s) 498, 1162
Bme1390I CCNGG 2 cut(s) 584, 1006
Bme18I GGWCC 3 cut(s) 52, 503, 1008
BmeT110I CYCGRG 1 cut(s) 1018
BmgT120I GGNCC 4 cut(s) 52, 331, 503, 1008
BmiI GGNNCC 7 cut(s) 54, 321, 504, 576, 626, 721, 1067
BmrFI CCNGG 2 cut(s) 584, 1006
BmsI GCATC 2 cut(s) 196, 522
BpiI GAAGAC 2 cut(s) 246, 1020
BplI GAGNNNNNCTC 2 cut(s) 979, 1011
BpuEI CTTGAG 1 cut(s) 1130
BsaJI CCNNGG 4 cut(s) 69, 1004, 1069, 1127
BsaWI WCCGGW 4 cut(s) 322, 814, 982, 1082
Bsc4I CCNNNNNNNGG 9 cut(s) 75, 216, 329, 634, 729, 775, 989, 1196, 1244
Bse1I ACTGG 2 cut(s) 734, 1267
Bse3DI GCAATG 1 cut(s) 885
BseAI TCCGGA 1 cut(s) 982
BseBI CCWGG 2 cut(s) 584, 1006
BseDI CCNNGG 4 cut(s) 69, 1004, 1069, 1127
BseGI GGATG 5 cut(s) 537, 706, 765, 823, 1000
BseLI CCNNNNNNNGG 9 cut(s) 75, 216, 329, 634, 729, 775, 989, 1196, 1244
BseMI GCAATG 1 cut(s) 885
BseMII CTCAG 3 cut(s) 39, 252, 534
BseNI ACTGG 2 cut(s) 734, 1267
BseRI GAGGAG 1 cut(s) 136
BseXI GCAGC 2 cut(s) 508, 1147
BseYI CCCAGC 1 cut(s) 399
Bsh1285I CGRYCG 1 cut(s) 313
BshFI GGCC 4 cut(s) 68, 333, 393, 638
BshNI GGYRCC 2 cut(s) 574, 1065
BsiEI CGRYCG 1 cut(s) 313
BsiHKAI GWGCWC 1 cut(s) 132
BsiHKCI CYCGRG 1 cut(s) 1018
BsiSI CCGG 4 cut(s) 323, 815, 983, 1083
BslFI GGGAC 3 cut(s) 296, 851, 1160
BslI CCNNNNNNNGG 9 cut(s) 75, 216, 329, 634, 729, 775, 989, 1196, 1244
BsmAI GTCTC 1 cut(s) 149
BsmFI GGGAC 3 cut(s) 296, 851, 1160
BsnI GGCC 4 cut(s) 68, 333, 393, 638
BsoBI CYCGRG 1 cut(s) 1018
Bsp1286I GDGCHC 1 cut(s) 132
Bsp13I TCCGGA 1 cut(s) 982
Bsp143I GATC 4 cut(s) 165, 197, 586, 719
Bsp19I CCATGG 1 cut(s) 69
BspACI CCGC 2 cut(s) 698, 717
BspANI GGCC 4 cut(s) 68, 333, 393, 638
BspCNI CTCAG 3 cut(s) 40, 253, 535
BspEI TCCGGA 1 cut(s) 982
BspLI GGNNCC 7 cut(s) 54, 321, 504, 576, 626, 721, 1067
BspPI GGATC 5 cut(s) 173, 205, 594, 714, 727
BspQI GCTCTTC 1 cut(s) 337
BspT107I GGYRCC 2 cut(s) 574, 1065
BsrBI CCGCTC 1 cut(s) 717
BsrDI GCAATG 1 cut(s) 885
BsrI ACTGG 2 cut(s) 734, 1267
BssECI CCNNGG 4 cut(s) 69, 1004, 1069, 1127
BssMI GATC 4 cut(s) 165, 197, 586, 719
BssT1I CCWWGG 3 cut(s) 69, 1069, 1127
Bst2UI CCWGG 2 cut(s) 584, 1006
Bst4CI ACNGT 4 cut(s) 194, 707, 957, 1231
Bst6I CTCTTC 2 cut(s) 337, 683
BstC8I GCNNGC 6 cut(s) 211, 741, 872, 1158, 1202, 1250
BstDEI CTNAG 3 cut(s) 48, 261, 543
BstDSI CCRYGG 1 cut(s) 69
BstEII GGTNACC 1 cut(s) 1085
BstF5I GGATG 5 cut(s) 537, 706, 765, 823, 1000
BstH2I RGCGCY 3 cut(s) 150, 996, 1063
BstHHI GCGC 3 cut(s) 149, 995, 1062
BstKTI GATC 4 cut(s) 168, 200, 589, 722
BstMAI GTCTC 1 cut(s) 149
BstMBI GATC 4 cut(s) 165, 197, 586, 719
BstMCI CGRYCG 1 cut(s) 313
BstMWI GCNNNNNNNGC 1 cut(s) 937
BstNI CCWGG 2 cut(s) 584, 1006
BstNSI RCATGY 2 cut(s) 1045, 1252
BstPI GGTNACC 1 cut(s) 1085
BstSCI CCNGG 2 cut(s) 582, 1004
BstSFI CTRYAG 1 cut(s) 1164
BstV1I GCAGC 2 cut(s) 508, 1147
BstV2I GAAGAC 2 cut(s) 246, 1020
BstX2I RGATCY 1 cut(s) 719
BstXI CCANNNNNNTGG 2 cut(s) 235, 571
BstYI RGATCY 1 cut(s) 719
BsuI GTATCC 1 cut(s) 1219
BsuRI GGCC 4 cut(s) 68, 333, 393, 638
BtgI CCRYGG 1 cut(s) 69
BtsCI GGATG 5 cut(s) 537, 706, 765, 823, 1000
BtsI GCAGTG 1 cut(s) 639
BtsIMutI CAGTG 3 cut(s) 45, 199, 639
Cac8I GCNNGC 6 cut(s) 211, 741, 872, 1158, 1202, 1250
CfoI GCGC 3 cut(s) 149, 995, 1062
Cfr13I GGNCC 4 cut(s) 52, 331, 503, 1008
CseI GACGC 1 cut(s) 422
Csp6I GTAC 4 cut(s) 190, 575, 1066, 1187
CviAII CATG 6 cut(s) 70, 113, 754, 862, 1042, 1249
CviQI GTAC 4 cut(s) 190, 575, 1066, 1187
DdeI CTNAG 3 cut(s) 48, 261, 543
DpnI GATC 4 cut(s) 167, 199, 588, 721
DpnII GATC 4 cut(s) 165, 197, 586, 719
EaeI YGGCCR 2 cut(s) 66, 636
Eam1104I CTCTTC 2 cut(s) 337, 683
EarI CTCTTC 2 cut(s) 337, 683
Eco130I CCWWGG 3 cut(s) 69, 1069, 1127
Eco147I AGGCCT 1 cut(s) 393
Eco47I GGWCC 3 cut(s) 52, 503, 1008
Eco47III AGCGCT 2 cut(s) 148, 1061
Eco57I CTGAAG 4 cut(s) 317, 408, 664, 803
Eco88I CYCGRG 1 cut(s) 1018
Eco91I GGTNACC 1 cut(s) 1085
EcoO109I RGGNCCY 1 cut(s) 52
EcoO65I GGTNACC 1 cut(s) 1085
EcoRII CCWGG 2 cut(s) 582, 1004
EcoT14I CCWWGG 3 cut(s) 69, 1069, 1127
ErhI CCWWGG 3 cut(s) 69, 1069, 1127
FaeI CATG 6 cut(s) 73, 116, 757, 865, 1045, 1252
FaqI GGGAC 3 cut(s) 296, 851, 1160
FatI CATG 6 cut(s) 69, 112, 753, 861, 1041, 1248
FauNDI CATATG 1 cut(s) 1180
Fnu4HI GCNGC 2 cut(s) 497, 1161
FokI GGATG 5 cut(s) 544, 713, 752, 830, 987
Fsp4HI GCNGC 2 cut(s) 497, 1161
FspBI CTAG 2 cut(s) 1070, 1128
GlaI GCGC 3 cut(s) 148, 994, 1061
GluI GCNGC 2 cut(s) 497, 1161
GsaI CCCAGC 1 cut(s) 403
HaeII RGCGCY 3 cut(s) 150, 996, 1063
HaeIII GGCC 4 cut(s) 68, 333, 393, 638
HapII CCGG 4 cut(s) 323, 815, 983, 1083
HgaI GACGC 1 cut(s) 422
HhaI GCGC 3 cut(s) 149, 995, 1062
Hin1II CATG 6 cut(s) 73, 116, 757, 865, 1045, 1252
Hin6I GCGC 3 cut(s) 147, 993, 1060
HinP1I GCGC 3 cut(s) 147, 993, 1060
HincII GTYRAC 1 cut(s) 808
HindII GTYRAC 1 cut(s) 808
HinfI GANTC 7 cut(s) 97, 137, 292, 515, 545, 656, 1016
HpaI GTTAAC 1 cut(s) 808
HpaII CCGG 4 cut(s) 323, 815, 983, 1083
HphI GGTGA 4 cut(s) 833, 961, 1097, 1115
Hpy166II GTNNAC 2 cut(s) 614, 808
Hpy188I TCNGA 8 cut(s) 142, 250, 262, 297, 412, 520, 724, 1012
Hpy188III TCNNGA 7 cut(s) 289, 506, 712, 983, 1020, 1142, 1215
Hpy8I GTNNAC 2 cut(s) 614, 808
Hpy99I CGWCG 1 cut(s) 776
HpyAV CCTTC 3 cut(s) 32, 383, 682
HpyCH4III ACNGT 4 cut(s) 194, 707, 957, 1231
HpyCH4V TGCA 4 cut(s) 649, 890, 953, 1045
HpyF10VI GCNNNNNNNGC 1 cut(s) 937
HpyF3I CTNAG 3 cut(s) 48, 261, 543
Hsp92II CATG 6 cut(s) 73, 116, 757, 865, 1045, 1252
HspAI GCGC 3 cut(s) 147, 993, 1060
Kpn2I TCCGGA 1 cut(s) 982
KpnI GGTACC 2 cut(s) 578, 1069
KspAI GTTAAC 1 cut(s) 808
Kzo9I GATC 4 cut(s) 165, 197, 586, 719
LguI GCTCTTC 1 cut(s) 337
LmnI GCTCC 1 cut(s) 714
Lsp1109I GCAGC 2 cut(s) 508, 1147
LweI GCATC 2 cut(s) 196, 522
MaeI CTAG 2 cut(s) 1070, 1128
MaeIII GTNAC 1 cut(s) 1085
MalI GATC 4 cut(s) 167, 199, 588, 721
MbiI CCGCTC 1 cut(s) 717
MboI GATC 4 cut(s) 165, 197, 586, 719
MboII GAAGA 6 cut(s) 91, 251, 354, 670, 751, 1025
MflI RGATCY 1 cut(s) 719
MhlI GDGCHC 1 cut(s) 132
MlsI TGGCCA 1 cut(s) 68
MluCI AATT 4 cut(s) 183, 348, 552, 1137
MluNI TGGCCA 1 cut(s) 68
MlyI GAGTC 3 cut(s) 524, 554, 1010
Mox20I TGGCCA 1 cut(s) 68
MroI TCCGGA 1 cut(s) 982
MroXI GAANNNNTTC 1 cut(s) 731
MscI TGGCCA 1 cut(s) 68
MseI TTAA 4 cut(s) 179, 276, 807, 1077
Msp20I TGGCCA 1 cut(s) 68
MspI CCGG 4 cut(s) 323, 815, 983, 1083
MspR9I CCNGG 2 cut(s) 584, 1006
MvaI CCWGG 2 cut(s) 584, 1006
MwoI GCNNNNNNNGC 1 cut(s) 937
NcoI CCATGG 1 cut(s) 69
NdeI CATATG 1 cut(s) 1180
NdeII GATC 4 cut(s) 165, 197, 586, 719
NlaIII CATG 6 cut(s) 73, 116, 757, 865, 1045, 1252
NlaIV GGNNCC 7 cut(s) 54, 321, 504, 576, 626, 721, 1067
NmeAIII GCCGAG 1 cut(s) 664
NmuCI GTSAC 1 cut(s) 1085
NspI RCATGY 2 cut(s) 1045, 1252
PaeI GCATGC 1 cut(s) 1252
PaeR7I CTCGAG 1 cut(s) 1018
PceI AGGCCT 1 cut(s) 393
PciSI GCTCTTC 1 cut(s) 337
PdmI GAANNNNTTC 1 cut(s) 731
PfeI GAWTC 4 cut(s) 97, 137, 292, 656
PflMI CCANNNNNTGG 1 cut(s) 634
PkrI GCNGC 2 cut(s) 498, 1162
PleI GAGTC 3 cut(s) 523, 553, 1010
PpsI GAGTC 3 cut(s) 523, 553, 1010
PpuMI RGGWCCY 1 cut(s) 52
Psp5II RGGWCCY 1 cut(s) 52
Psp6I CCWGG 2 cut(s) 582, 1004
PspEI GGTNACC 1 cut(s) 1085
PspFI CCCAGC 1 cut(s) 399
PspGI CCWGG 2 cut(s) 582, 1004
PspN4I GGNNCC 7 cut(s) 54, 321, 504, 576, 626, 721, 1067
PspPI GGNCC 4 cut(s) 52, 331, 503, 1008
PspPPI RGGWCCY 1 cut(s) 52
PsuI RGATCY 1 cut(s) 719
RsaI GTAC 4 cut(s) 191, 576, 1067, 1188
RsaNI GTAC 4 cut(s) 190, 575, 1066, 1187
SapI GCTCTTC 1 cut(s) 337
SaqAI TTAA 4 cut(s) 179, 276, 807, 1077
SatI GCNGC 2 cut(s) 497, 1161
Sau3AI GATC 4 cut(s) 165, 197, 586, 719
Sau96I GGNCC 4 cut(s) 52, 331, 503, 1008
SchI GAGTC 3 cut(s) 524, 554, 1010
ScrFI CCNGG 2 cut(s) 584, 1006
SduI GDGCHC 1 cut(s) 132
SfaNI GCATC 2 cut(s) 196, 522
SfcI CTRYAG 1 cut(s) 1164
Sfr274I CTCGAG 1 cut(s) 1018
SinI GGWCC 3 cut(s) 52, 503, 1008
SlaI CTCGAG 1 cut(s) 1018
SmlI CTYRAG 2 cut(s) 1018, 1109
SmoI CTYRAG 2 cut(s) 1018, 1109
SphI GCATGC 1 cut(s) 1252
Sse9I AATT 4 cut(s) 183, 348, 552, 1137
SseBI AGGCCT 1 cut(s) 393
SsiI CCGC 2 cut(s) 698, 717
SspI AATATT 2 cut(s) 915, 1026
SspMI CTAG 2 cut(s) 1070, 1128
StuI AGGCCT 1 cut(s) 393
StyD4I CCNGG 2 cut(s) 582, 1004
StyI CCWWGG 3 cut(s) 69, 1069, 1127
TaaI ACNGT 4 cut(s) 194, 707, 957, 1231
TaqI TCGA 4 cut(s) 288, 313, 1019, 1216
TaqII GACCGA 1 cut(s) 299
TasI AATT 4 cut(s) 183, 348, 552, 1137
TatI WGTACW 1 cut(s) 189
TfiI GAWTC 4 cut(s) 97, 137, 292, 656
Tru1I TTAA 4 cut(s) 179, 276, 807, 1077
Tru9I TTAA 4 cut(s) 179, 276, 807, 1077
TscAI CASTG 3 cut(s) 52, 199, 639
TseFI GTSAC 1 cut(s) 1085
TseI GCWGC 2 cut(s) 496, 1160
Tsp45I GTSAC 1 cut(s) 1085
TspDTI ATGAA 2 cut(s) 648, 1149
TspRI CASTG 3 cut(s) 52, 199, 639
Van91I CCANNNNNTGG 1 cut(s) 634
VpaK11BI GGWCC 3 cut(s) 52, 503, 1008
XapI RAATTY 1 cut(s) 1137
XceI RCATGY 2 cut(s) 1045, 1252
XhoI CTCGAG 1 cut(s) 1018
XmaJI CCTAGG 2 cut(s) 1069, 1127
XmnI GAANNNNTTC 1 cut(s) 731
XspI CTAG 2 cut(s) 1070, 1128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.