Rw6G013330

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000030
Physical Location & Seq
Reverse (-)
24598800 .. 24601608
2809 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G013330.1

Sequence Viewer

Length: 1200 bp
ATGATAAAGATTCACGGGAGACATTTAACTGTCACCCCTGAAGACTTCAGGCATGTAATGAGTGTAAGGGATGGTGGGGCTAACGTAGATTTAACAGGAAGATTGGCTGAACCTAACATTGTACAGTTGAAGTCTAAATTCTGTGGTGTTGATGATGAAATAAGGTTAGATGTTGTGGCGAAGATGGTAGCGCAATCCGAAACTCCCGATGACACATTTGTAATAAGTTTCTGTCTTTATGCCTTGTCAACTATGATTTTGCCAATTGAAAGTGATGCAGTGGATCCCAAACAGCTTCTCGCCCTAAAGGATCCAAAAACAATTAGCACAAAAAACTGGGCGCCATTTGCTTTAAGAAATCTTATTGAAGGAGTTGCAAGGTATAAGAATGGGGTGTCATCAACTGTGAATGGGTGTACTGCATTTCTGCAGCTATTCTATTTGGATACAATGCTAATGAAGTTCGTAGTTGTTCCGACATACACATCTCCCGTACTATGTTGGAATAACAAGCAGGTAAGAATTATGTATGATGAGGCAGAGGCTAATGGTGGGTATTACTCGACTGGTATAATAGCGACCAAGCGTTGGTCCACTACTCGATTCCTTGATAATGCCGGATTTGTTGATGCAAGTACAGGACTAAAAACAACTATTGTTGAAGATCTAGACAAGGTTAGGAATGATGTTGATGCTTTCAAATGCGAATTTGAGAAGGGAGAGAGAGAGATTAGTAACATGATTGTAGAAGTGATGAAGGAAGTCCTTGATGAGGAGGGCCCGAGTGAGGCGAAAGGGAGGGATGAATTTGATATGTATGAAGATGACATAGTTCCTCGTCAGCTAGGATTGCCAACTGTCGTTGGGCCTCATCAACATAATATGGAACGTGGTAAGGATTGCGCAAGTGGTGCTGTGGGGGATGGTCTGATATCGTCCATGGTTACTATATGCTGCCTTCGTAGATATAGTGGCCGATTGGGTTCCTGCAAGCAGAGGATCCGGCTTGCTGTTGATATAGTCAATCACCCAATGAATATAGTACGTGTTTCTGTATGGGCAACAACAGCTCAGGAAACTCCAATTGATGCTAAATCACTAGGACGTGCAGCATACAACAGGCAAGTCATCCGTAATTGCCATATCCCACTGGATATATCAGGAATAAAATTCAAGGGCCGTCGCACTGCGAGGCACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

399

Amino Acids

44.5

Weight (kDa)

6.72

Isoelectric Point (pI)

38.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 904
Acc36I ACCTGC 1 cut(s) 505
AccB1I GGYRCC 1 cut(s) 340
AccB7I CCANNNNNTGG 1 cut(s) 588
AclWI GGATC 6 cut(s) 278, 291, 305, 318, 994, 1007
AcoI YGGCCR 1 cut(s) 973
AcsI RAATTY 4 cut(s) 137, 707, 806, 1169
AcuI CTGAAG 2 cut(s) 31, 60
AcyI GRCGYC 1 cut(s) 341
AfaI GTAC 5 cut(s) 123, 418, 495, 637, 1044
AfiI CCNNNNNNNGG 3 cut(s) 588, 772, 787
AflIII ACRYGT 1 cut(s) 1045
AgsI TTSAA 6 cut(s) 130, 269, 368, 662, 700, 1174
AjiI CACGTC 1 cut(s) 1106
AluBI AGCT 4 cut(s) 295, 433, 844, 1070
AluI AGCT 4 cut(s) 295, 433, 844, 1070
Alw26I GTCTC 1 cut(s) 13
AlwI GGATC 6 cut(s) 278, 291, 305, 318, 994, 1007
Ama87I CYCGRG 1 cut(s) 781
AoxI GGCC 4 cut(s) 778, 866, 973, 1177
ApaI GGGCCC 1 cut(s) 782
ApeKI GCWGC 3 cut(s) 430, 954, 1109
ApoI RAATTY 4 cut(s) 137, 707, 806, 1169
AspLEI GCGC 3 cut(s) 193, 343, 905
AspS9I GGNCC 5 cut(s) 591, 778, 779, 866, 1177
AsuHPI GGTGA 2 cut(s) 25, 1019
AvaI CYCGRG 1 cut(s) 781
AvaII GGWCC 1 cut(s) 591
BaeGI GKGCMC 1 cut(s) 782
BamHI GGATCC 3 cut(s) 283, 310, 999
BanI GGYRCC 1 cut(s) 340
BanII GRGCYC 1 cut(s) 782
BbsI GAAGAC 1 cut(s) 48
BbvI GCAGC 3 cut(s) 442, 941, 1121
BccI CCATC 3 cut(s) 65, 178, 917
BceAI ACGGC 1 cut(s) 1164
BciVI GTATCC 1 cut(s) 439
BcoDI GTCTC 1 cut(s) 13
BfaI CTAG 3 cut(s) 668, 845, 1100
BfmI CTRYAG 1 cut(s) 428
BfoI RGCGCY 1 cut(s) 344
BfuAI ACCTGC 1 cut(s) 505
BfuI GTATCC 1 cut(s) 439
BglII AGATCT 1 cut(s) 664
BisI GCNGC 3 cut(s) 431, 955, 1110
BlsI GCNGC 3 cut(s) 432, 956, 1111
Bme18I GGWCC 1 cut(s) 591
BmeT110I CYCGRG 1 cut(s) 781
BmgBI CACGTC 1 cut(s) 1106
BmgT120I GGNCC 5 cut(s) 591, 778, 779, 866, 1177
BmiI GGNNCC 6 cut(s) 285, 312, 342, 780, 985, 1001
BmrI ACTGGG 1 cut(s) 346
BmsI GCATC 4 cut(s) 265, 619, 682, 1078
BmuI ACTGGG 1 cut(s) 346
BpiI GAAGAC 1 cut(s) 48
Bpu10I CCTNAGC 1 cut(s) 1071
BsaAI YACGTR 1 cut(s) 1046
BsaHI GRCGYC 1 cut(s) 341
BsaJI CCNNGG 1 cut(s) 939
Bsc4I CCNNNNNNNGG 3 cut(s) 588, 772, 787
Bse1I ACTGG 3 cut(s) 341, 571, 1155
BseDI CCNNGG 1 cut(s) 939
BseGI GGATG 4 cut(s) 76, 808, 928, 1128
BseLI CCNNNNNNNGG 3 cut(s) 588, 772, 787
BseMII CTCAG 1 cut(s) 1085
BseNI ACTGG 3 cut(s) 341, 571, 1155
BseRI GAGGAG 1 cut(s) 788
BseSI GKGCMC 1 cut(s) 782
BseXI GCAGC 3 cut(s) 442, 941, 1121
BsgI GTGCAG 1 cut(s) 1128
BshFI GGCC 4 cut(s) 780, 868, 975, 1179
BshNI GGYRCC 1 cut(s) 340
BsiHKCI CYCGRG 1 cut(s) 781
BsiSI CCGG 2 cut(s) 618, 1003
BslI CCNNNNNNNGG 3 cut(s) 588, 772, 787
BsmAI GTCTC 1 cut(s) 13
BsnI GGCC 4 cut(s) 780, 868, 975, 1179
BsoBI CYCGRG 1 cut(s) 781
Bsp120I GGGCCC 1 cut(s) 778
Bsp1286I GDGCHC 1 cut(s) 782
Bsp1407I TGTACA 1 cut(s) 121
Bsp143I GATC 4 cut(s) 283, 310, 664, 999
Bsp19I CCATGG 1 cut(s) 939
BspANI GGCC 4 cut(s) 780, 868, 975, 1179
BspCNI CTCAG 1 cut(s) 1084
BspLI GGNNCC 6 cut(s) 285, 312, 342, 780, 985, 1001
BspMAI CTGCAG 1 cut(s) 432
BspMI ACCTGC 1 cut(s) 505
BspPI GGATC 6 cut(s) 278, 291, 305, 318, 994, 1007
BspT107I GGYRCC 1 cut(s) 340
BsrGI TGTACA 1 cut(s) 121
BsrI ACTGG 3 cut(s) 341, 571, 1155
BssECI CCNNGG 1 cut(s) 939
BssMI GATC 4 cut(s) 283, 310, 664, 999
BssNI GRCGYC 1 cut(s) 341
BssT1I CCWWGG 1 cut(s) 939
Bst4CI ACNGT 4 cut(s) 31, 126, 406, 859
BstACI GRCGYC 1 cut(s) 341
BstAPI GCANNNNNTGC 1 cut(s) 911
BstAUI TGTACA 1 cut(s) 121
BstBAI YACGTR 1 cut(s) 1046
BstC8I GCNNGC 2 cut(s) 992, 1008
BstDEI CTNAG 1 cut(s) 1071
BstDSI CCRYGG 1 cut(s) 939
BstENI CCTNNNNNAGG 1 cut(s) 770
BstF5I GGATG 4 cut(s) 76, 808, 928, 1128
BstH2I RGCGCY 1 cut(s) 344
BstHHI GCGC 3 cut(s) 193, 343, 905
BstKTI GATC 4 cut(s) 286, 313, 667, 1002
BstMAI GTCTC 1 cut(s) 13
BstMBI GATC 4 cut(s) 283, 310, 664, 999
BstMWI GCNNNNNNNGC 4 cut(s) 347, 850, 911, 1067
BstNSI RCATGY 1 cut(s) 56
BstSFI CTRYAG 1 cut(s) 428
BstSLI GKGCMC 1 cut(s) 782
BstV1I GCAGC 3 cut(s) 442, 941, 1121
BstV2I GAAGAC 1 cut(s) 48
BstX2I RGATCY 4 cut(s) 283, 310, 664, 999
BstYI RGATCY 4 cut(s) 283, 310, 664, 999
BsuI GTATCC 1 cut(s) 439
BsuRI GGCC 4 cut(s) 780, 868, 975, 1179
BtgI CCRYGG 1 cut(s) 939
BtrI CACGTC 1 cut(s) 1106
BtsCI GGATG 4 cut(s) 76, 808, 928, 1128
BtsI GCAGTG 2 cut(s) 285, 1185
BtsIMutI CAGTG 3 cut(s) 285, 1148, 1185
BveI ACCTGC 1 cut(s) 505
Cac8I GCNNGC 2 cut(s) 992, 1008
CfoI GCGC 3 cut(s) 193, 343, 905
Cfr13I GGNCC 5 cut(s) 591, 778, 779, 866, 1177
Csp6I GTAC 5 cut(s) 122, 417, 494, 636, 1043
CviAII CATG 3 cut(s) 53, 739, 940
CviQI GTAC 5 cut(s) 122, 417, 494, 636, 1043
DdeI CTNAG 1 cut(s) 1071
DinI GGCGCC 1 cut(s) 342
DpnI GATC 4 cut(s) 285, 312, 666, 1001
DpnII GATC 4 cut(s) 283, 310, 664, 999
EaeI YGGCCR 1 cut(s) 973
Eco130I CCWWGG 1 cut(s) 939
Eco24I GRGCYC 1 cut(s) 782
Eco32I GATATC 1 cut(s) 933
Eco47I GGWCC 1 cut(s) 591
Eco57I CTGAAG 2 cut(s) 31, 60
Eco88I CYCGRG 1 cut(s) 781
EcoNI CCTNNNNNAGG 1 cut(s) 770
EcoO109I RGGNCCY 1 cut(s) 778
EcoRV GATATC 1 cut(s) 933
EcoT14I CCWWGG 1 cut(s) 939
EcoT38I GRGCYC 1 cut(s) 782
EgeI GGCGCC 1 cut(s) 342
EheI GGCGCC 1 cut(s) 342
ErhI CCWWGG 1 cut(s) 939
FaeI CATG 3 cut(s) 56, 742, 943
FatI CATG 3 cut(s) 52, 738, 939
Fnu4HI GCNGC 3 cut(s) 431, 955, 1110
FokI GGATG 4 cut(s) 83, 815, 935, 1115
FriOI GRGCYC 1 cut(s) 782
Fsp4HI GCNGC 3 cut(s) 431, 955, 1110
FspBI CTAG 3 cut(s) 668, 845, 1100
FspI TGCGCA 1 cut(s) 904
GlaI GCGC 3 cut(s) 192, 342, 904
GluI GCNGC 3 cut(s) 431, 955, 1110
HaeII RGCGCY 1 cut(s) 344
HaeIII GGCC 4 cut(s) 780, 868, 975, 1179
HapII CCGG 2 cut(s) 618, 1003
HhaI GCGC 3 cut(s) 193, 343, 905
Hin1I GRCGYC 1 cut(s) 341
Hin1II CATG 3 cut(s) 56, 742, 943
Hin6I GCGC 3 cut(s) 191, 341, 903
HinP1I GCGC 3 cut(s) 191, 341, 903
HincII GTYRAC 1 cut(s) 249
HindII GTYRAC 1 cut(s) 249
HinfI GANTC 2 cut(s) 10, 603
HpaII CCGG 2 cut(s) 618, 1003
HphI GGTGA 2 cut(s) 25, 1019
Hpy166II GTNNAC 3 cut(s) 249, 417, 594
Hpy188I TCNGA 3 cut(s) 199, 477, 930
Hpy188III TCNNGA 4 cut(s) 206, 668, 1073, 1161
Hpy8I GTNNAC 3 cut(s) 249, 417, 594
Hpy99I CGWCG 1 cut(s) 1185
HpyAV CCTTC 4 cut(s) 362, 709, 751, 968
HpyCH4III ACNGT 4 cut(s) 31, 126, 406, 859
HpyCH4IV ACGT 4 cut(s) 84, 889, 1045, 1105
HpyCH4V TGCA 7 cut(s) 278, 377, 422, 430, 632, 990, 1109
HpyF10VI GCNNNNNNNGC 4 cut(s) 347, 850, 911, 1067
HpyF3I CTNAG 1 cut(s) 1071
HpySE526I ACGT 4 cut(s) 84, 889, 1045, 1105
Hsp92I GRCGYC 1 cut(s) 341
Hsp92II CATG 3 cut(s) 56, 742, 943
HspAI GCGC 3 cut(s) 191, 341, 903
KasI GGCGCC 1 cut(s) 340
Kzo9I GATC 4 cut(s) 283, 310, 664, 999
Lsp1109I GCAGC 3 cut(s) 442, 941, 1121
LweI GCATC 4 cut(s) 265, 619, 682, 1078
MaeI CTAG 3 cut(s) 668, 845, 1100
MaeII ACGT 4 cut(s) 84, 889, 1045, 1105
MaeIII GTNAC 3 cut(s) 31, 734, 943
MalI GATC 4 cut(s) 285, 312, 666, 1001
MboI GATC 4 cut(s) 283, 310, 664, 999
MboII GAAGA 5 cut(s) 53, 111, 193, 674, 833
MfeI CAATTG 2 cut(s) 264, 1083
MflI RGATCY 4 cut(s) 283, 310, 664, 999
MhlI GDGCHC 1 cut(s) 782
MluCI AATT 9 cut(s) 137, 264, 321, 522, 707, 806, 1083, 1135, 1169
Mly113I GGCGCC 1 cut(s) 341
MmeI TCCRAC 2 cut(s) 482, 500
MseI TTAA 3 cut(s) 26, 92, 353
MspI CCGG 2 cut(s) 618, 1003
MunI CAATTG 2 cut(s) 264, 1083
MwoI GCNNNNNNNGC 4 cut(s) 347, 850, 911, 1067
NarI GGCGCC 1 cut(s) 341
NcoI CCATGG 1 cut(s) 939
NdeII GATC 4 cut(s) 283, 310, 664, 999
NlaIII CATG 3 cut(s) 56, 742, 943
NlaIV GGNNCC 6 cut(s) 285, 312, 342, 780, 985, 1001
NmuCI GTSAC 1 cut(s) 31
NsbI TGCGCA 1 cut(s) 904
NspI RCATGY 1 cut(s) 56
PfeI GAWTC 2 cut(s) 10, 603
PflMI CCANNNNNTGG 1 cut(s) 588
PkrI GCNGC 3 cut(s) 432, 956, 1111
PluTI GGCGCC 1 cut(s) 344
Ppu21I YACGTR 1 cut(s) 1046
PspN4I GGNNCC 6 cut(s) 285, 312, 342, 780, 985, 1001
PspOMI GGGCCC 1 cut(s) 778
PspPI GGNCC 5 cut(s) 591, 778, 779, 866, 1177
PstI CTGCAG 1 cut(s) 432
PsuI RGATCY 4 cut(s) 283, 310, 664, 999
RsaI GTAC 5 cut(s) 123, 418, 495, 637, 1044
RsaNI GTAC 5 cut(s) 122, 417, 494, 636, 1043
SaqAI TTAA 3 cut(s) 26, 92, 353
SatI GCNGC 3 cut(s) 431, 955, 1110
Sau3AI GATC 4 cut(s) 283, 310, 664, 999
Sau96I GGNCC 5 cut(s) 591, 778, 779, 866, 1177
SduI GDGCHC 1 cut(s) 782
SfaNI GCATC 4 cut(s) 265, 619, 682, 1078
SfcI CTRYAG 1 cut(s) 428
SfoI GGCGCC 1 cut(s) 342
SinI GGWCC 1 cut(s) 591
Sse9I AATT 9 cut(s) 137, 264, 321, 522, 707, 806, 1083, 1135, 1169
SspDI GGCGCC 1 cut(s) 340
SspMI CTAG 3 cut(s) 668, 845, 1100
StyI CCWWGG 1 cut(s) 939
TaaI ACNGT 4 cut(s) 31, 126, 406, 859
TaiI ACGT 4 cut(s) 87, 892, 1048, 1108
TaqI TCGA 2 cut(s) 563, 601
TasI AATT 9 cut(s) 137, 264, 321, 522, 707, 806, 1083, 1135, 1169
TatI WGTACW 3 cut(s) 121, 416, 635
TfiI GAWTC 2 cut(s) 10, 603
Tru1I TTAA 3 cut(s) 26, 92, 353
Tru9I TTAA 3 cut(s) 26, 92, 353
TscAI CASTG 3 cut(s) 285, 1155, 1192
TseFI GTSAC 1 cut(s) 31
TseI GCWGC 3 cut(s) 430, 954, 1109
Tsp45I GTSAC 1 cut(s) 31
TspDTI ATGAA 6 cut(s) 171, 473, 770, 819, 834, 1049
TspGWI ACGGA 1 cut(s) 1121
TspRI CASTG 3 cut(s) 285, 1155, 1192
Van91I CCANNNNNTGG 1 cut(s) 588
VpaK11BI GGWCC 1 cut(s) 591
XagI CCTNNNNNAGG 1 cut(s) 770
XapI RAATTY 4 cut(s) 137, 707, 806, 1169
XbaI TCTAGA 1 cut(s) 667
XceI RCATGY 1 cut(s) 56
XspI CTAG 3 cut(s) 668, 845, 1100
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.