Rmu_sc0000982.1_g000033

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000982.1
OG0000030
Physical Location & Seq
Reverse (-)
154327 .. 155740
1414 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000982.1_g000033.1.cds

Sequence Viewer

Length: 1161 bp
atggatggaagagaaatcgtgatcttaatttcccgaagcaggaacgatgcactctgcgctattgacacgcaaactgaaggtaatgaccagaagcggaagaatgaaaagcataatgaagaaaacaaggtgaccgagactgtcgttgaagtgtcaactgggtcaggaattgatgattgtatgacattatctggtggtaacgaagaatcaggcagtcaggttacaatgaggacagcatgccgaggaaaacacttcacaaaaactatgtcttccccatcggctggaaagttagttgcaacaatagaaatggggtttggatcactttaccaatttggctgtaccaaagtgaatctcccactttgtcaaatactggttgaaaaatttgacgtggcgaactcaagcatcaagattcatggaaggagcctgacaatcaaacatgaagactttcaacgcataatgggcgtaaggaatggaggttgtgatgtggaggttgaaggaaacaccgaggaccctgatattttggccatggagaggaagatttcgaggaaggagaatcagataacaatacatggattgaggagggtgctcattgaatctgaaagcgctgatgagacatttaggatcaactttgccttgtatgcccttgcaaccctgctatgcctagtaacaggaatccaagcggaacgaagttaccttataccacttaaggatccaaatgcactgtgggtgtcatcgtttcagggcacgaggattagattggccggagattttattctgttccttcaattgttctacctggacgttgttagcaacgacatgtttgttttgccgaagatcgtgaagccggttatgtgttggggcatgaacgaggcgaagaaagtttatgagcaggtggagagcatgggcggatggaaaagtgagatttacgtgacaaagaggtatctgtgggacagaacaattcagtacagtggatcgtttgatgccagcacagggataaaaaccaatgtggtggaagacttgtcagaagtgaggcctgaggtgggtgttgttaaaggggacatcgagaatctgaagtcaacagtcggtcgattggaacaggatatgggccgtttgagaagtgcaattatgatgttagaaacatcgcttgatcagcagaaggtctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMG_box

Protein Analysis

386

Amino Acids

43.19

Weight (kDa)

5.62

Isoelectric Point (pI)

42.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 877
Acc36I ACCTGC 1 cut(s) 877
AccB7I CCANNNNNTGG 1 cut(s) 278
AciI CCGC 3 cut(s) 94, 677, 903
AclWI GGATC 5 cut(s) 322, 626, 701, 714, 976
AcoI YGGCCR 2 cut(s) 519, 756
AcsI RAATTY 1 cut(s) 377
AcuI CTGAAG 2 cut(s) 96, 1088
AfaI GTAC 2 cut(s) 337, 962
AfeI AGCGCT 1 cut(s) 601
AfiI CCNNNNNNNGG 5 cut(s) 39, 278, 528, 987, 1037
AflII CTTAAG 1 cut(s) 701
AflIII ACRYGT 1 cut(s) 813
AgsI TTSAA 6 cut(s) 146, 374, 446, 491, 590, 782
AjiI CACGTC 1 cut(s) 385
AjnI CCWGG 1 cut(s) 792
AjuI GAANNNNNNNTTGG 2 cut(s) 294, 326
Alw21I GWGCWC 1 cut(s) 585
Alw26I GTCTC 2 cut(s) 128, 602
AlwI GGATC 5 cut(s) 322, 626, 701, 714, 976
Aor51HI AGCGCT 1 cut(s) 601
AoxI GGCC 4 cut(s) 519, 756, 1028, 1102
ApoI RAATTY 1 cut(s) 377
ArsI GACNNNNNNTTYG 2 cut(s) 248, 280
Asp700I GAANNNNTTC 1 cut(s) 441
AspLEI GCGC 2 cut(s) 59, 602
AspS9I GGNCC 2 cut(s) 505, 1102
AsuHPI GGTGA 1 cut(s) 139
AvaII GGWCC 1 cut(s) 505
AxyI CCTNAGG 1 cut(s) 1032
BaeGI GKGCMC 1 cut(s) 743
BalI TGGCCA 1 cut(s) 521
BamHI GGATCC 1 cut(s) 706
BauI CACGAG 1 cut(s) 742
BbsI GAAGAC 3 cut(s) 258, 444, 1017
Bbv12I GWGCWC 1 cut(s) 585
BccI CCATC 2 cut(s) 280, 900
BceAI ACGGC 1 cut(s) 1089
BciT130I CCWGG 1 cut(s) 794
BclI TGATCA 1 cut(s) 1144
BcoDI GTCTC 2 cut(s) 128, 602
BfaI CTAG 1 cut(s) 659
BfoI RGCGCY 1 cut(s) 603
BfrI CTTAAG 1 cut(s) 701
BfuAI ACCTGC 1 cut(s) 877
Bme1390I CCNGG 1 cut(s) 794
Bme18I GGWCC 1 cut(s) 505
BmgBI CACGTC 1 cut(s) 385
BmgT120I GGNCC 2 cut(s) 505, 1102
BmiI GGNNCC 3 cut(s) 419, 507, 708
BmrFI CCNGG 1 cut(s) 794
BmrI ACTGGG 1 cut(s) 165
BmsI GCATC 3 cut(s) 37, 408, 967
BmuI ACTGGG 1 cut(s) 165
BpiI GAAGAC 3 cut(s) 258, 444, 1017
BpuEI CTTGAG 1 cut(s) 379
BsaAI YACGTR 1 cut(s) 925
BsaJI CCNNGG 3 cut(s) 238, 501, 522
Bsc4I CCNNNNNNNGG 5 cut(s) 39, 278, 528, 987, 1037
Bse118I RCCGGY 1 cut(s) 841
Bse1I ACTGG 2 cut(s) 160, 372
Bse21I CCTNAGG 1 cut(s) 1032
BseBI CCWGG 1 cut(s) 794
BseDI CCNNGG 3 cut(s) 238, 501, 522
BseGI GGATG 2 cut(s) 10, 911
BseLI CCNNNNNNNGG 5 cut(s) 39, 278, 528, 987, 1037
BseMII CTCAG 1 cut(s) 1023
BseNI ACTGG 2 cut(s) 160, 372
BseRI GAGGAG 1 cut(s) 589
BseSI GKGCMC 1 cut(s) 743
Bsh1285I CGRYCG 1 cut(s) 1084
BshFI GGCC 4 cut(s) 521, 758, 1030, 1104
BsiEI CGRYCG 1 cut(s) 1084
BsiHKAI GWGCWC 1 cut(s) 585
BsiSI CCGG 2 cut(s) 759, 842
BslFI GGGAC 2 cut(s) 959, 1067
BslI CCNNNNNNNGG 5 cut(s) 39, 278, 528, 987, 1037
BsmAI GTCTC 2 cut(s) 128, 602
BsmFI GGGAC 2 cut(s) 959, 1067
BsnI GGCC 4 cut(s) 521, 758, 1030, 1104
Bsp1286I GDGCHC 2 cut(s) 585, 743
Bsp143I GATC 7 cut(s) 21, 314, 618, 706, 831, 968, 1144
Bsp19I CCATGG 1 cut(s) 522
BspACI CCGC 3 cut(s) 94, 677, 903
BspANI GGCC 4 cut(s) 521, 758, 1030, 1104
BspCNI CTCAG 1 cut(s) 1024
BspLI GGNNCC 3 cut(s) 419, 507, 708
BspMI ACCTGC 1 cut(s) 877
BspPI GGATC 5 cut(s) 322, 626, 701, 714, 976
BspTI CTTAAG 1 cut(s) 701
BsrFI RCCGGY 1 cut(s) 841
BsrI ACTGG 2 cut(s) 160, 372
BssAI RCCGGY 1 cut(s) 841
BssECI CCNNGG 3 cut(s) 238, 501, 522
BssMI GATC 7 cut(s) 21, 314, 618, 706, 831, 968, 1144
BssSI CACGAG 1 cut(s) 742
BssT1I CCWWGG 1 cut(s) 522
Bst2BI CACGAG 1 cut(s) 742
Bst2UI CCWGG 1 cut(s) 794
Bst4CI ACNGT 4 cut(s) 139, 720, 965, 1078
Bst6I CTCTTC 1 cut(s) 4
BstAFI CTTAAG 1 cut(s) 701
BstBAI YACGTR 1 cut(s) 925
BstC8I GCNNGC 2 cut(s) 235, 982
BstDEI CTNAG 1 cut(s) 1032
BstDSI CCRYGG 1 cut(s) 522
BstEII GGTNACC 1 cut(s) 127
BstF5I GGATG 2 cut(s) 10, 911
BstH2I RGCGCY 1 cut(s) 603
BstHHI GCGC 2 cut(s) 59, 602
BstKTI GATC 7 cut(s) 24, 317, 621, 709, 834, 971, 1147
BstMAI GTCTC 2 cut(s) 128, 602
BstMBI GATC 7 cut(s) 21, 314, 618, 706, 831, 968, 1144
BstMCI CGRYCG 1 cut(s) 1084
BstMWI GCNNNNNNNGC 4 cut(s) 56, 456, 635, 1147
BstNI CCWGG 1 cut(s) 794
BstNSI RCATGY 2 cut(s) 237, 817
BstPI GGTNACC 1 cut(s) 127
BstSCI CCNGG 1 cut(s) 792
BstSLI GKGCMC 1 cut(s) 743
BstV2I GAAGAC 3 cut(s) 258, 444, 1017
BstX2I RGATCY 1 cut(s) 706
BstXI CCANNNNNNTGG 1 cut(s) 1006
BstYI RGATCY 1 cut(s) 706
Bsu36I CCTNAGG 1 cut(s) 1032
BsuRI GGCC 4 cut(s) 521, 758, 1030, 1104
BtgI CCRYGG 1 cut(s) 522
BtgZI GCGATG 1 cut(s) 1122
BtrI CACGTC 1 cut(s) 385
BtsCI GGATG 2 cut(s) 10, 911
BtsIMutI CAGTG 2 cut(s) 716, 970
BveI ACCTGC 1 cut(s) 877
Cac8I GCNNGC 2 cut(s) 235, 982
CfoI GCGC 2 cut(s) 59, 602
Cfr10I RCCGGY 1 cut(s) 841
Cfr13I GGNCC 2 cut(s) 505, 1102
Csp6I GTAC 2 cut(s) 336, 961
CviAII CATG 8 cut(s) 234, 410, 434, 523, 566, 814, 859, 898
CviJI RGCY 8 cut(s) 278, 333, 420, 521, 758, 841, 1030, 1104
CviKI_1 RGCY 8 cut(s) 278, 333, 420, 521, 758, 841, 1030, 1104
CviQI GTAC 2 cut(s) 336, 961
DdeI CTNAG 1 cut(s) 1032
DpnI GATC 7 cut(s) 23, 316, 620, 708, 833, 970, 1146
DpnII GATC 7 cut(s) 21, 314, 618, 706, 831, 968, 1144
EaeI YGGCCR 2 cut(s) 519, 756
Eam1104I CTCTTC 1 cut(s) 4
EarI CTCTTC 1 cut(s) 4
EciI GGCGGA 1 cut(s) 918
Eco130I CCWWGG 1 cut(s) 522
Eco147I AGGCCT 1 cut(s) 1030
Eco47I GGWCC 1 cut(s) 505
Eco47III AGCGCT 1 cut(s) 601
Eco57I CTGAAG 2 cut(s) 96, 1088
Eco81I CCTNAGG 1 cut(s) 1032
Eco91I GGTNACC 1 cut(s) 127
EcoO109I RGGNCCY 1 cut(s) 505
EcoO65I GGTNACC 1 cut(s) 127
EcoRII CCWGG 1 cut(s) 792
EcoT14I CCWWGG 1 cut(s) 522
ErhI CCWWGG 1 cut(s) 522
FaeI CATG 8 cut(s) 237, 413, 437, 526, 569, 817, 862, 901
FaqI GGGAC 2 cut(s) 959, 1067
FatI CATG 8 cut(s) 233, 409, 433, 522, 565, 813, 858, 897
FbaI TGATCA 1 cut(s) 1144
FokI GGATG 2 cut(s) 17, 918
FspBI CTAG 1 cut(s) 659
GlaI GCGC 2 cut(s) 58, 601
HaeII RGCGCY 1 cut(s) 603
HaeIII GGCC 4 cut(s) 521, 758, 1030, 1104
HapII CCGG 2 cut(s) 759, 842
HhaI GCGC 2 cut(s) 59, 602
Hin1II CATG 8 cut(s) 237, 413, 437, 526, 569, 817, 862, 901
Hin6I GCGC 2 cut(s) 57, 600
HinP1I GCGC 2 cut(s) 57, 600
HincII GTYRAC 2 cut(s) 153, 1074
HindII GTYRAC 2 cut(s) 153, 1074
HinfI GANTC 7 cut(s) 203, 346, 406, 550, 590, 669, 1063
HpaII CCGG 2 cut(s) 759, 842
HphI GGTGA 1 cut(s) 139
Hpy166II GTNNAC 2 cut(s) 153, 1074
Hpy188I TCNGA 5 cut(s) 555, 595, 1021, 1068, 1160
Hpy188III TCNNGA 6 cut(s) 19, 33, 162, 403, 835, 1060
Hpy8I GTNNAC 2 cut(s) 153, 1074
HpyAV CCTTC 6 cut(s) 71, 408, 485, 538, 788, 1147
HpyCH4III ACNGT 4 cut(s) 139, 720, 965, 1078
HpyCH4IV ACGT 3 cut(s) 384, 798, 924
HpyCH4V TGCA 5 cut(s) 50, 293, 644, 716, 1118
HpyF10VI GCNNNNNNNGC 4 cut(s) 56, 456, 635, 1147
HpyF3I CTNAG 1 cut(s) 1032
HpySE526I ACGT 3 cut(s) 384, 798, 924
Hsp92II CATG 8 cut(s) 237, 413, 437, 526, 569, 817, 862, 901
HspAI GCGC 2 cut(s) 57, 600
Ksp22I TGATCA 1 cut(s) 1144
Kzo9I GATC 7 cut(s) 21, 314, 618, 706, 831, 968, 1144
LmnI GCTCC 1 cut(s) 417
LweI GCATC 3 cut(s) 37, 408, 967
MaeI CTAG 1 cut(s) 659
MaeII ACGT 3 cut(s) 384, 798, 924
MaeIII GTNAC 6 cut(s) 127, 194, 217, 661, 686, 925
MalI GATC 7 cut(s) 23, 316, 620, 708, 833, 970, 1146
MboI GATC 7 cut(s) 21, 314, 618, 706, 831, 968, 1144
MfeI CAATTG 1 cut(s) 782
MflI RGATCY 1 cut(s) 706
MhlI GDGCHC 2 cut(s) 585, 743
MlsI TGGCCA 1 cut(s) 521
MluCI AATT 7 cut(s) 27, 165, 326, 377, 782, 954, 1119
MluNI TGGCCA 1 cut(s) 521
Mox20I TGGCCA 1 cut(s) 521
MroXI GAANNNNTTC 1 cut(s) 441
MscI TGGCCA 1 cut(s) 521
MseI TTAA 3 cut(s) 26, 702, 1047
Msp20I TGGCCA 1 cut(s) 521
MspCI CTTAAG 1 cut(s) 701
MspI CCGG 2 cut(s) 759, 842
MspR9I CCNGG 1 cut(s) 794
MunI CAATTG 1 cut(s) 782
MvaI CCWGG 1 cut(s) 794
MwoI GCNNNNNNNGC 4 cut(s) 56, 456, 635, 1147
NcoI CCATGG 1 cut(s) 522
NdeII GATC 7 cut(s) 21, 314, 618, 706, 831, 968, 1144
NlaIII CATG 8 cut(s) 237, 413, 437, 526, 569, 817, 862, 901
NlaIV GGNNCC 3 cut(s) 419, 507, 708
NmeAIII GCCGAG 1 cut(s) 263
NmuCI GTSAC 2 cut(s) 127, 925
NspI RCATGY 2 cut(s) 237, 817
PaeI GCATGC 1 cut(s) 237
PaqCI CACCTGC 1 cut(s) 877
PceI AGGCCT 1 cut(s) 1030
PciI ACATGT 1 cut(s) 813
PdmI GAANNNNTTC 1 cut(s) 441
PfeI GAWTC 7 cut(s) 203, 346, 406, 550, 590, 669, 1063
PflMI CCANNNNNTGG 1 cut(s) 278
Ppu21I YACGTR 1 cut(s) 925
PpuMI RGGWCCY 1 cut(s) 505
PscI ACATGT 1 cut(s) 813
Psp5II RGGWCCY 1 cut(s) 505
Psp6I CCWGG 1 cut(s) 792
PspEI GGTNACC 1 cut(s) 127
PspGI CCWGG 1 cut(s) 792
PspN4I GGNNCC 3 cut(s) 419, 507, 708
PspPI GGNCC 2 cut(s) 505, 1102
PspPPI RGGWCCY 1 cut(s) 505
PsuI RGATCY 1 cut(s) 706
RsaI GTAC 2 cut(s) 337, 962
RsaNI GTAC 2 cut(s) 336, 961
SaqAI TTAA 3 cut(s) 26, 702, 1047
Sau3AI GATC 7 cut(s) 21, 314, 618, 706, 831, 968, 1144
Sau96I GGNCC 2 cut(s) 505, 1102
ScrFI CCNGG 1 cut(s) 794
SduI GDGCHC 2 cut(s) 585, 743
SfaNI GCATC 3 cut(s) 37, 408, 967
SinI GGWCC 1 cut(s) 505
SmlI CTYRAG 2 cut(s) 394, 701
SmoI CTYRAG 2 cut(s) 394, 701
SphI GCATGC 1 cut(s) 237
Sse9I AATT 7 cut(s) 27, 165, 326, 377, 782, 954, 1119
SseBI AGGCCT 1 cut(s) 1030
SsiI CCGC 3 cut(s) 94, 677, 903
SspMI CTAG 1 cut(s) 659
StuI AGGCCT 1 cut(s) 1030
StyD4I CCNGG 1 cut(s) 792
StyI CCWWGG 1 cut(s) 522
TaaI ACNGT 4 cut(s) 139, 720, 965, 1078
TaiI ACGT 3 cut(s) 387, 801, 927
TaqI TCGA 3 cut(s) 539, 1059, 1084
TaqII GACCGA 2 cut(s) 146, 1070
TasI AATT 7 cut(s) 27, 165, 326, 377, 782, 954, 1119
TatI WGTACW 1 cut(s) 960
TfiI GAWTC 7 cut(s) 203, 346, 406, 550, 590, 669, 1063
Tru1I TTAA 3 cut(s) 26, 702, 1047
Tru9I TTAA 3 cut(s) 26, 702, 1047
TscAI CASTG 2 cut(s) 723, 970
TseFI GTSAC 2 cut(s) 127, 925
Tsp45I GTSAC 2 cut(s) 127, 925
TspDTI ATGAA 5 cut(s) 117, 129, 398, 450, 875
TspRI CASTG 2 cut(s) 723, 970
Van91I CCANNNNNTGG 1 cut(s) 278
Vha464I CTTAAG 1 cut(s) 701
VpaK11BI GGWCC 1 cut(s) 505
XapI RAATTY 1 cut(s) 377
XceI RCATGY 2 cut(s) 237, 817
XcmI CCANNNNNNNNNTGG 1 cut(s) 717
XmnI GAANNNNTTC 1 cut(s) 441
XspI CTAG 1 cut(s) 659
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.