Rmu_sc0006373.1_g000010

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006373.1
OG0000030
Physical Location & Seq
Reverse (-)
47696 .. 50803
3108 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006373.1_g000010.1.cds

Sequence Viewer

Length: 1881 bp
atgaaaaaccaagttgcaatattatttcaagagataggttgttcccttgaagctgaggatggacatgataatttggatgagtgtgaagcgagaactgaagattgcctggtcagtcctacagtaggtcgacgcatgagggaatttagagcaatatgtactggtttgccagaagagaagcaaatagcaattgatgttaccggttatggggctatttactcgttcaggtgcagcgaactgaatgttcgtctatgccacatgatgtgcaataactttgatatcgaaaactcaacaatcaagattcacgggagacatttaacggtcacccctgaagacttccgtcatgtaatgagtctaagggatggtggggcagacgtagatataagtggaagcttggatggacctgacattgtagagttgaaggctaaatttggtggtgctgacgaggaaataagcttggatgttgtggggacgatggtggtgcaatcagaaaatgttgatgatacatttataataagtttctgtctgtatgctctgtcaactattattatgccaactgaaagtgatgcagtggatcccaggctacttatcgctataaaggatccaaaaacaattagcacaaaaaattgggcgtcctttgcatttagaaatcttattgatggacttagaaggtataagaatggggcggcatcaacggtctatgggtgtattgcatttttgcagctgttctatttggatacaatgctaatgaagttgtttgttgttccaacgtacacatcaccggtactatgttggaataacaagcaggcaagaataatgtacgaccaggcagaggctaatgggggttattactcgactggtataatagcgacgaaacgttggtcaacaactcgattccttgataatgtcggatctgttgatgccagtacagggctgaaaacaacaattgttgaagatctagataaggttaggagcgatgttgaaggtttcaaaagcaaatttgaggaggttagatcttgcatatcacatatagaaccggacatggtcggcctccgcaatgctattatgacactacagacatgtattactgaaataagggacgaagggattaataacatggttgtcgaagtgatgaaggaagtctttgatgaggagagtccaattgggcacagagagggggatgaatgtgatatgtttgaagatgatatagttatccgtaaggcgggatcatcaagtgttgttgggcctcatcagcctaataaggaacgggctaaggatttcgcaagtggtagtgttgtggacggtatgctatcgtcagtgctgacaatggaagatatactgatatttttccccctccatgacggtgttgtggacaaatggatcttaatggttttgaacctcgatgtgggagaatgtgagatttgggacagctgccccgacattgatggcagacaacgtcaggagtcttatgcatatgttattgtggagctatttcagaaggtgttttgtaatgcaattagatcgttgccggcattgtatgcaagactagcctcagtgtccacagtgtatccaaaagaagccgcgaccaacccaaacattgaggattctggtatatttttaatcaagaacatgcagtattaccggaaacgctggttcgaaccgttcaactcagccgaccagaggatccgtcttgcccttgacatagtcaatcacccaatgaatgcagtccgtgtttttgtatgggcagcagttgctcaagaaactccaattgacgctacctcacttggacgtgtagcgtacaacgggaacctcctctctaattgccatatcccacttgatatttcaggaatcaaatttaaggcacgccgcactgcgaggcactga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

626

Amino Acids

70.13

Weight (kDa)

4.97

Isoelectric Point (pI)

44.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 509
AccI GTMKAC 1 cut(s) 127
AccII CGCG 1 cut(s) 1580
AciI CCGC 5 cut(s) 683, 1051, 1220, 1578, 1864
AclI AACGTT 1 cut(s) 874
AclWI GGATC 9 cut(s) 566, 579, 593, 606, 916, 1231, 1385, 1675, 1688
AcsI RAATTY 4 cut(s) 140, 425, 995, 1850
AcuI CTGAAG 2 cut(s) 117, 348
AcyI GRCGYC 1 cut(s) 629
AfaI GTAC 6 cut(s) 157, 770, 783, 818, 925, 1796
AfiI CCNNNNNNNGG 7 cut(s) 122, 204, 829, 927, 1219, 1402, 1677
AflIII ACRYGT 2 cut(s) 1076, 1786
AgeI ACCGGT 2 cut(s) 197, 778
AgsI TTSAA 9 cut(s) 29, 50, 418, 950, 980, 988, 1196, 1393, 1663
AjiI CACGTC 1 cut(s) 1787
AjnI CCWGG 3 cut(s) 105, 575, 822
AluBI AGCT 6 cut(s) 53, 390, 453, 721, 1428, 1486
AluI AGCT 6 cut(s) 53, 390, 453, 721, 1428, 1486
Alw26I GTCTC 1 cut(s) 301
AlwI GGATC 9 cut(s) 566, 579, 593, 606, 916, 1231, 1385, 1675, 1688
AoxI GGCC 2 cut(s) 1045, 1241
ApeKI GCWGC 4 cut(s) 228, 718, 1428, 1742
ApoI RAATTY 4 cut(s) 140, 425, 995, 1850
ArsI GACNNNNNNTTYG 2 cut(s) 863, 895
AseI ATTAAT 1 cut(s) 1107
AsiGI ACCGGT 2 cut(s) 197, 778
AspS9I GGNCC 2 cut(s) 398, 1241
AsuHPI GGTGA 3 cut(s) 313, 768, 1700
AsuII TTCGAA 1 cut(s) 1653
AvaII GGWCC 1 cut(s) 398
BaeGI GKGCMC 1 cut(s) 1167
BamHI GGATCC 3 cut(s) 571, 598, 1680
BbsI GAAGAC 1 cut(s) 336
BbvCI CCTCAGC 1 cut(s) 54
BbvI GCAGC 4 cut(s) 240, 730, 1415, 1754
BccI CCATC 6 cut(s) 53, 353, 389, 466, 650, 1436
BcgI CGANNNNNNTGC 4 cut(s) 460, 494, 1500, 1534
BciT130I CCWGG 3 cut(s) 107, 577, 824
BciVI GTATCC 2 cut(s) 727, 1575
BcoDI GTCTC 1 cut(s) 301
BfaI CTAG 2 cut(s) 956, 1544
BfmI CTRYAG 2 cut(s) 117, 1070
BfuI GTATCC 2 cut(s) 727, 1575
BglII AGATCT 2 cut(s) 952, 1010
BisI GCNGC 7 cut(s) 229, 684, 719, 1429, 1578, 1743, 1864
BlsI GCNGC 7 cut(s) 230, 685, 720, 1430, 1579, 1744, 1865
Bme1390I CCNGG 3 cut(s) 107, 577, 824
Bme18I GGWCC 1 cut(s) 398
BmgBI CACGTC 1 cut(s) 1787
BmgT120I GGNCC 2 cut(s) 398, 1241
BmiI GGNNCC 4 cut(s) 573, 600, 1682, 1805
BmrFI CCNGG 3 cut(s) 107, 577, 824
BmsI GCATC 3 cut(s) 553, 695, 907
BoxI GACNNNNGTC 1 cut(s) 336
BpiI GAAGAC 1 cut(s) 336
Bpu10I CCTNAGC 2 cut(s) 54, 1269
Bpu14I TTCGAA 1 cut(s) 1653
BpuEI CTTGAG 1 cut(s) 1737
BsaHI GRCGYC 1 cut(s) 629
BsaJI CCNNGG 1 cut(s) 575
BsaWI WCCGGW 4 cut(s) 197, 778, 1033, 1638
Bsc4I CCNNNNNNNGG 7 cut(s) 122, 204, 829, 927, 1219, 1402, 1677
Bse118I RCCGGY 3 cut(s) 197, 778, 1525
Bse1I ACTGG 3 cut(s) 163, 859, 921
Bse3DI GCAATG 1 cut(s) 1060
BseBI CCWGG 3 cut(s) 107, 577, 824
BseDI CCNNGG 1 cut(s) 575
BseGI GGATG 6 cut(s) 64, 82, 364, 400, 463, 1183
BseLI CCNNNNNNNGG 7 cut(s) 122, 204, 829, 927, 1219, 1402, 1677
BseMI GCAATG 1 cut(s) 1060
BseMII CTCAG 3 cut(s) 45, 1563, 1680
BseNI ACTGG 3 cut(s) 163, 859, 921
BseRI GAGGAG 3 cut(s) 1016, 1163, 1799
BseSI GKGCMC 1 cut(s) 1167
BseXI GCAGC 4 cut(s) 240, 730, 1415, 1754
BsgI GTGCAG 1 cut(s) 247
Bsh1236I CGCG 1 cut(s) 1580
BshFI GGCC 2 cut(s) 1047, 1243
BshTI ACCGGT 2 cut(s) 197, 778
BsiSI CCGG 5 cut(s) 198, 779, 1034, 1526, 1639
BslFI GGGAC 3 cut(s) 481, 1109, 1436
BslI CCNNNNNNNGG 7 cut(s) 122, 204, 829, 927, 1219, 1402, 1677
BsmAI GTCTC 1 cut(s) 301
BsmFI GGGAC 3 cut(s) 481, 1109, 1436
BsmI GAATGC 1 cut(s) 1723
BsnI GGCC 2 cut(s) 1047, 1243
Bsp119I TTCGAA 1 cut(s) 1653
Bsp1286I GDGCHC 1 cut(s) 1167
Bsp143I GATC 9 cut(s) 571, 598, 908, 952, 1010, 1223, 1377, 1517, 1680
BspACI CCGC 5 cut(s) 683, 1051, 1220, 1578, 1864
BspANI GGCC 2 cut(s) 1047, 1243
BspCNI CTCAG 3 cut(s) 46, 1562, 1679
BspFNI CGCG 1 cut(s) 1580
BspLI GGNNCC 4 cut(s) 573, 600, 1682, 1805
BspPI GGATC 9 cut(s) 566, 579, 593, 606, 916, 1231, 1385, 1675, 1688
BspT104I TTCGAA 1 cut(s) 1653
BsrDI GCAATG 1 cut(s) 1060
BsrFI RCCGGY 3 cut(s) 197, 778, 1525
BsrI ACTGG 3 cut(s) 163, 859, 921
BssAI RCCGGY 3 cut(s) 197, 778, 1525
BssECI CCNNGG 1 cut(s) 575
BssMI GATC 9 cut(s) 571, 598, 908, 952, 1010, 1223, 1377, 1517, 1680
BssNI GRCGYC 1 cut(s) 629
Bst2UI CCWGG 3 cut(s) 107, 577, 824
Bst4CI ACNGT 7 cut(s) 121, 319, 694, 1301, 1361, 1561, 1659
Bst6I CTCTTC 1 cut(s) 165
BstACI GRCGYC 1 cut(s) 629
BstAPI GCANNNNNTGC 2 cut(s) 1535, 1748
BstBI TTCGAA 1 cut(s) 1653
BstC8I GCNNGC 3 cut(s) 804, 1527, 1861
BstDEI CTNAG 6 cut(s) 54, 353, 662, 1269, 1549, 1666
BstEII GGTNACC 1 cut(s) 319
BstENI CCTNNNNNAGG 1 cut(s) 120
BstF5I GGATG 6 cut(s) 64, 82, 364, 400, 463, 1183
BstFNI CGCG 1 cut(s) 1580
BstKTI GATC 9 cut(s) 574, 601, 911, 955, 1013, 1226, 1380, 1520, 1683
BstMAI GTCTC 1 cut(s) 301
BstMBI GATC 9 cut(s) 571, 598, 908, 952, 1010, 1223, 1377, 1517, 1680
BstMWI GCNNNNNNNGC 5 cut(s) 635, 1249, 1535, 1544, 1748
BstNI CCWGG 3 cut(s) 107, 577, 824
BstNSI RCATGY 2 cut(s) 1080, 1630
BstPAI GACNNNNGTC 1 cut(s) 336
BstPI GGTNACC 1 cut(s) 319
BstSCI CCNGG 3 cut(s) 105, 575, 822
BstSFI CTRYAG 2 cut(s) 117, 1070
BstSLI GKGCMC 1 cut(s) 1167
BstUI CGCG 1 cut(s) 1580
BstV1I GCAGC 4 cut(s) 240, 730, 1415, 1754
BstV2I GAAGAC 1 cut(s) 336
BstX2I RGATCY 7 cut(s) 571, 598, 908, 952, 1010, 1377, 1680
BstYI RGATCY 7 cut(s) 571, 598, 908, 952, 1010, 1377, 1680
BsuI GTATCC 2 cut(s) 727, 1575
BsuRI GGCC 2 cut(s) 1047, 1243
BtgZI GCGATG 1 cut(s) 987
BtrI CACGTC 1 cut(s) 1787
BtsCI GGATG 6 cut(s) 64, 82, 364, 400, 463, 1183
BtsI GCAGTG 2 cut(s) 573, 1866
BtsIMutI CAGTG 6 cut(s) 573, 1320, 1557, 1566, 1866, 1876
Cac8I GCNNGC 3 cut(s) 804, 1527, 1861
Cfr10I RCCGGY 3 cut(s) 197, 778, 1525
Cfr13I GGNCC 2 cut(s) 398, 1241
CseI GACGC 3 cut(s) 138, 618, 1778
Csp6I GTAC 6 cut(s) 156, 769, 782, 817, 924, 1795
CspAI ACCGGT 2 cut(s) 197, 778
CviAII CATG 9 cut(s) 65, 133, 256, 341, 1039, 1077, 1114, 1355, 1627
CviQI GTAC 6 cut(s) 156, 769, 782, 817, 924, 1795
DdeI CTNAG 6 cut(s) 54, 353, 662, 1269, 1549, 1666
DpnI GATC 9 cut(s) 573, 600, 910, 954, 1012, 1225, 1379, 1519, 1682
DpnII GATC 9 cut(s) 571, 598, 908, 952, 1010, 1223, 1377, 1517, 1680
Eam1104I CTCTTC 1 cut(s) 165
EarI CTCTTC 1 cut(s) 165
Eco32I GATATC 1 cut(s) 277
Eco47I GGWCC 1 cut(s) 398
Eco57I CTGAAG 2 cut(s) 117, 348
Eco91I GGTNACC 1 cut(s) 319
EcoNI CCTNNNNNAGG 1 cut(s) 120
EcoO65I GGTNACC 1 cut(s) 319
EcoRII CCWGG 3 cut(s) 105, 575, 822
EcoRV GATATC 1 cut(s) 277
EcoT22I ATGCAT 1 cut(s) 1471
FaeI CATG 9 cut(s) 68, 136, 259, 344, 1042, 1080, 1117, 1358, 1630
FalI AAGNNNNNCTT 2 cut(s) 1124, 1156
FaqI GGGAC 3 cut(s) 481, 1109, 1436
FatI CATG 9 cut(s) 64, 132, 255, 340, 1038, 1076, 1113, 1354, 1626
FauI CCCGC 1 cut(s) 1213
FauNDI CATATG 1 cut(s) 1471
FblI GTMKAC 1 cut(s) 127
Fnu4HI GCNGC 7 cut(s) 229, 684, 719, 1429, 1578, 1743, 1864
FokI GGATG 6 cut(s) 71, 89, 371, 407, 470, 1190
Fsp4HI GCNGC 7 cut(s) 229, 684, 719, 1429, 1578, 1743, 1864
FspBI CTAG 2 cut(s) 956, 1544
GluI GCNGC 7 cut(s) 229, 684, 719, 1429, 1578, 1743, 1864
HaeIII GGCC 2 cut(s) 1047, 1243
HapII CCGG 5 cut(s) 198, 779, 1034, 1526, 1639
HgaI GACGC 3 cut(s) 138, 618, 1778
Hin1I GRCGYC 1 cut(s) 629
Hin1II CATG 9 cut(s) 68, 136, 259, 344, 1042, 1080, 1117, 1358, 1630
HincII GTYRAC 3 cut(s) 128, 537, 882
HindII GTYRAC 3 cut(s) 128, 537, 882
HindIII AAGCTT 2 cut(s) 388, 451
HinfI GANTC 7 cut(s) 298, 349, 891, 1153, 1460, 1601, 1845
HpaII CCGG 5 cut(s) 198, 779, 1034, 1526, 1639
HphI GGTGA 3 cut(s) 313, 768, 1700
Hpy166II GTNNAC 7 cut(s) 128, 537, 771, 882, 1297, 1369, 1557
Hpy188I TCNGA 3 cut(s) 487, 908, 1494
Hpy188III TCNNGA 7 cut(s) 29, 295, 956, 1457, 1621, 1754, 1842
Hpy8I GTNNAC 7 cut(s) 128, 537, 771, 882, 1297, 1369, 1557
Hpy99I CGWCG 2 cut(s) 132, 871
HpyAV CCTTC 6 cut(s) 412, 660, 974, 1094, 1126, 1489
HpyCH4III ACNGT 7 cut(s) 121, 319, 694, 1301, 1361, 1561, 1659
HpyCH4IV ACGT 5 cut(s) 372, 767, 874, 1453, 1786
HpyF10VI GCNNNNNNNGC 5 cut(s) 635, 1249, 1535, 1544, 1748
HpyF3I CTNAG 6 cut(s) 54, 353, 662, 1269, 1549, 1666
HpySE526I ACGT 5 cut(s) 372, 767, 874, 1453, 1786
Hsp92I GRCGYC 1 cut(s) 629
Hsp92II CATG 9 cut(s) 68, 136, 259, 344, 1042, 1080, 1117, 1358, 1630
KroI GCCGGC 1 cut(s) 1525
KroNI GCCGGC 1 cut(s) 1527
Kzo9I GATC 9 cut(s) 571, 598, 908, 952, 1010, 1223, 1377, 1517, 1680
LmnI GCTCC 2 cut(s) 969, 1483
Lsp1109I GCAGC 4 cut(s) 240, 730, 1415, 1754
LweI GCATC 3 cut(s) 553, 695, 907
MaeI CTAG 2 cut(s) 956, 1544
MaeII ACGT 5 cut(s) 372, 767, 874, 1453, 1786
MaeIII GTNAC 2 cut(s) 193, 319
MalI GATC 9 cut(s) 573, 600, 910, 954, 1012, 1225, 1379, 1519, 1682
MboI GATC 9 cut(s) 571, 598, 908, 952, 1010, 1223, 1377, 1517, 1680
MboII GAAGA 6 cut(s) 110, 182, 341, 962, 1208, 1340
MfeI CAATTG 4 cut(s) 186, 942, 1158, 1764
MflI RGATCY 7 cut(s) 571, 598, 908, 952, 1010, 1377, 1680
MhlI GDGCHC 1 cut(s) 1167
MlyI GAGTC 3 cut(s) 358, 1162, 1469
MmeI TCCRAC 3 cut(s) 770, 788, 886
Mph1103I ATGCAT 1 cut(s) 1471
MroNI GCCGGC 1 cut(s) 1525
MseI TTAA 5 cut(s) 314, 1107, 1382, 1616, 1854
MslI CAYNNNNRTG 1 cut(s) 1359
MspA1I CMGCKG 2 cut(s) 721, 1428
MspI CCGG 5 cut(s) 198, 779, 1034, 1526, 1639
MspR9I CCNGG 3 cut(s) 107, 577, 824
MunI CAATTG 4 cut(s) 186, 942, 1158, 1764
Mva1269I GAATGC 1 cut(s) 1723
MvaI CCWGG 3 cut(s) 107, 577, 824
MvnI CGCG 1 cut(s) 1580
MwoI GCNNNNNNNGC 5 cut(s) 635, 1249, 1535, 1544, 1748
NaeI GCCGGC 1 cut(s) 1527
NdeI CATATG 1 cut(s) 1471
NdeII GATC 9 cut(s) 571, 598, 908, 952, 1010, 1223, 1377, 1517, 1680
NgoMIV GCCGGC 1 cut(s) 1525
NlaIII CATG 9 cut(s) 68, 136, 259, 344, 1042, 1080, 1117, 1358, 1630
NlaIV GGNNCC 4 cut(s) 573, 600, 1682, 1805
NmuCI GTSAC 1 cut(s) 319
NsiI ATGCAT 1 cut(s) 1471
NspI RCATGY 2 cut(s) 1080, 1630
NspV TTCGAA 1 cut(s) 1653
PciI ACATGT 1 cut(s) 1076
PctI GAATGC 1 cut(s) 1723
PdiI GCCGGC 1 cut(s) 1527
PfeI GAWTC 4 cut(s) 298, 891, 1601, 1845
PflFI GACNNNGTC 3 cut(s) 1040, 1452, 1700
PinAI ACCGGT 2 cut(s) 197, 778
PkrI GCNGC 7 cut(s) 230, 685, 720, 1430, 1579, 1744, 1865
PleI GAGTC 3 cut(s) 357, 1161, 1468
PpsI GAGTC 3 cut(s) 357, 1161, 1468
PscI ACATGT 1 cut(s) 1076
PshAI GACNNNNGTC 1 cut(s) 336
PshBI ATTAAT 1 cut(s) 1107
PsiI TTATAA 1 cut(s) 509
Psp1406I AACGTT 1 cut(s) 874
Psp6I CCWGG 3 cut(s) 105, 575, 822
PspEI GGTNACC 1 cut(s) 319
PspGI CCWGG 3 cut(s) 105, 575, 822
PspN4I GGNNCC 4 cut(s) 573, 600, 1682, 1805
PspPI GGNCC 2 cut(s) 398, 1241
PsuI RGATCY 7 cut(s) 571, 598, 908, 952, 1010, 1377, 1680
PsyI GACNNNGTC 3 cut(s) 1040, 1452, 1700
PvuII CAGCTG 2 cut(s) 721, 1428
RsaI GTAC 6 cut(s) 157, 770, 783, 818, 925, 1796
RsaNI GTAC 6 cut(s) 156, 769, 782, 817, 924, 1795
RseI CAYNNNNRTG 1 cut(s) 1359
SalI GTCGAC 1 cut(s) 126
SaqAI TTAA 5 cut(s) 314, 1107, 1382, 1616, 1854
SatI GCNGC 7 cut(s) 229, 684, 719, 1429, 1578, 1743, 1864
Sau3AI GATC 9 cut(s) 571, 598, 908, 952, 1010, 1223, 1377, 1517, 1680
Sau96I GGNCC 2 cut(s) 398, 1241
SchI GAGTC 3 cut(s) 358, 1162, 1469
ScrFI CCNGG 3 cut(s) 107, 577, 824
SduI GDGCHC 1 cut(s) 1167
SfaNI GCATC 3 cut(s) 553, 695, 907
SfcI CTRYAG 2 cut(s) 117, 1070
SfuI TTCGAA 1 cut(s) 1653
SinI GGWCC 1 cut(s) 398
SmiMI CAYNNNNRTG 1 cut(s) 1359
SmlI CTYRAG 1 cut(s) 1752
SmoI CTYRAG 1 cut(s) 1752
SsiI CCGC 5 cut(s) 683, 1051, 1220, 1578, 1864
SspI AATATT 1 cut(s) 21
SspMI CTAG 2 cut(s) 956, 1544
StyD4I CCNGG 3 cut(s) 105, 575, 822
TaaI ACNGT 7 cut(s) 121, 319, 694, 1301, 1361, 1561, 1659
TaiI ACGT 5 cut(s) 375, 770, 877, 1456, 1789
TaqI TCGA 7 cut(s) 127, 279, 851, 889, 1122, 1398, 1653
TatI WGTACW 2 cut(s) 155, 923
TauI GCSGC 3 cut(s) 686, 1580, 1866
TfiI GAWTC 4 cut(s) 298, 891, 1601, 1845
Tru1I TTAA 5 cut(s) 314, 1107, 1382, 1616, 1854
Tru9I TTAA 5 cut(s) 314, 1107, 1382, 1616, 1854
TscAI CASTG 5 cut(s) 573, 1320, 1557, 1566, 1873
TseFI GTSAC 1 cut(s) 319
TseI GCWGC 4 cut(s) 228, 718, 1428, 1742
Tsp45I GTSAC 1 cut(s) 319
TspDTI ATGAA 5 cut(s) 17, 761, 1145, 1194, 1730
TspGWI ACGGA 4 cut(s) 326, 1202, 1673, 1715
TspRI CASTG 5 cut(s) 573, 1320, 1557, 1566, 1873
Tth111I GACNNNGTC 3 cut(s) 1040, 1452, 1700
VpaK11BI GGWCC 1 cut(s) 398
VspI ATTAAT 1 cut(s) 1107
XagI CCTNNNNNAGG 1 cut(s) 120
XapI RAATTY 4 cut(s) 140, 425, 995, 1850
XbaI TCTAGA 1 cut(s) 955
XceI RCATGY 2 cut(s) 1080, 1630
XmiI GTMKAC 1 cut(s) 127
XspI CTAG 2 cut(s) 956, 1544
Zsp2I ATGCAT 1 cut(s) 1471
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.