RLG00000009252

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0000030
Physical Location & Seq
Forward (+)
49778115 .. 49781243
3129 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009252

Sequence Viewer

Length: 2181 bp
ATGTTTCAGGTCAGCGAGAGTGCTGTTGAAGTGGCCAGTCTGACAAGTGATGATGATTGCAAGACATTGTCCGGTGTTAATGATGAATCAGACCTCGAGGTTACAATCAGAACAGCGTGTCGAGGAAAACACTTCAGAAGAACTATGTCTTCCCTGTCAGATGAAAAGGTAGCTGCGACATATGAAATTGGATTTGGGTCTCTGCACCGATTTCGTTGTGGCAAAGTAAACCTCCCACTGTGCCAAATGCTGGTTGAAAATTTTGATGTTGGGAACTCATGCATCAAGATACACAGAAGGAACCTGACAATCACACATGAAGACTTTCGGCGCATTATGGGCGTCATGGATGGAGGGTGCGATGTGAATCTTGAAGGAAGCACCGAGGACCCTGATATACTGGGGCTGAAGAGCAAGTTTTCAAGGAAGGAGAAGGAGATAACCATACATGGTCTGAGGAGGTTGTTGATTGAATCCGAAAGTACTGATAACACTTTTAAGGTCAGCTTTGCTTTGTATGCCCTTGCAACTCTGTTAATCCCAGTTACGGGGATCGAAGTTGATCCAAGATACCTTATATCACTTAAGGATCCCAATGCCTTGGGTTCAAAAAACTGGGCAAAGTTTGCATTCGCCAAGCTTGTTGAAGGGGTGTCATCATTCCAGGCCACGCGGACTGGTTTGGCAAGAGGTTGTATTCTGTTCCTTCAATTGTTCTACCTGGATGTTGTTGGCAACGGTATCTGTATATATCCAAAGATTGGGAAACCAGTGATGACGTGGAGCAGAGATGACTTGAAGAGAGTTTATGAAAAAGTGGAGAGTGAGGGCGGATTTAATAGCGAGAATGTACGTGTAACGAAGAAGTATTTCAGGGGAAATTTACTTTTAGGGACTAGATCAGTTGATCCCAGCACAGGGATTAAGACAACTGTAGTAGACGATTTATCAGAAGTGAGGTCTGATGTTGGTGTTGTGAAAGGGGATATAGAGAGTTTAAAGTTAACGGTTGGTCGGTTGGAGCCAGACATGGGTCGATTAAGGAGAGCAATTCTGACACTAGAATCCACGGTTGGGGAACTTAAGGCCAACGGTCTCGGCGGCATTGTTGCTGAAGCAATCAAGCAAGTGTTTGAAGACAAGTCCTACACTTACGGTGTTAATTTTGGGAACGATGGTCTTTTTATCAATGAAGAGCAGCAAGGCACAGAAGCTGAGCAACATGACAATGAGATGCCTCATAACAAATCTATCATTGTCATGTCCACTGACAAGGATGCATATGGATGCGACAGCAGTGACATGGAAGAAGATGAGGCAGGGAGTTTCCCGGCGGTGTCTGAGATATTGCACAGCGACTCATACCTACTGACCTATCTATTCAGCAAGAAGGTTACCGCCGACGACAGTCTTGGGAGCAATGAAGTTGCTAGGCACGAGGAATGGTCTGTTTCTCGATGGGACATGAGGAGCTTGTCCCCAATGCAATGTCTGACCTGTGAGATTGTTGACATATCGGCTGCTTACTTGTTTGATCGGGGATCGGACGACTGGTTCATGCCAACTTCATTCTCAGAACGTGCTAAGGAGTATTTAGCGGGTGTGCAGGTGGAAGGTCTCGTGCCATCTACCGTTAAACTGTGCCGACTGGGAAGATTCATTGGTAGATTTATGTCGTGCAAAAAGCATTGGTTCTTGGCTGTTCTTAAAATACCCAGTTGGCAATGCGAAATATGGGACAGCAACCCTGAGAAGTCAGCAAACAAACGCCGGGAGGAATATGTTGCTGCATCTATATCGCTGATTGAAAAAGTTTTTGCTCCTGAATTGCGATTGTCACCTGGCATTCATGCCAAGATTGGTTCATTGTCCATTAAGTATCCACGGAGAAGCCCTAGGCATCCCAACAGCCAAGACTCAGGAATATTTCTGATTAGAAGCATGCAATTTTACCGTCAGCGCTGGTACCAAGGGTTTAACTCGGGGGACCAGAGGGTTCGTATGGCACTTGAGACAGTGAATCACCCAAAGAATGAAGTTCTGGAACAGGTCTTTGAAGCCGCTGCAGAGGAAGTCCCATATGATGTAGCTTCTTCATGGTTGGCACCAGAATATTTGAACGAAAATGGAAGTCTCCCAACTGCAGGCATGAAGTTCAACCCACGCCGGGCTAGGCGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

727

Amino Acids

81.46

Weight (kDa)

5.87

Isoelectric Point (pI)

44.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_C48 PF02902 561 - 654 4.5e-07 Ulp1 protease family, C-terminal catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1597
AbsI CCTCGAGG 1 cut(s) 95
Acc36I ACCTGC 1 cut(s) 1597
Acc65I GGTACC 1 cut(s) 1965
AccB1I GGYRCC 2 cut(s) 1965, 2104
AccB7I CCANNNNNTGG 2 cut(s) 250, 761
AccI GTMKAC 1 cut(s) 939
AccII CGCG 1 cut(s) 673
AciI CCGC 7 cut(s) 673, 831, 1101, 1334, 1398, 1598, 2061
AclWI GGATC 6 cut(s) 557, 560, 584, 597, 902, 1549
AcoI YGGCCR 1 cut(s) 33
AcsI RAATTY 2 cut(s) 259, 880
AcuI CTGAAG 3 cut(s) 118, 428, 1134
AcyI GRCGYC 1 cut(s) 342
AfaI GTAC 3 cut(s) 484, 852, 1967
AfeI AGCGCT 1 cut(s) 1961
AflII CTTAAG 2 cut(s) 584, 1082
AflIII ACRYGT 1 cut(s) 853
AjiI CACGTC 1 cut(s) 780
AjnI CCWGG 3 cut(s) 663, 720, 1840
AjuI GAANNNNNNNTTGG 4 cut(s) 177, 209, 1056, 1088
AloI GAACNNNNNNTCC 2 cut(s) 1538, 1570
AluBI AGCT 6 cut(s) 173, 507, 640, 1214, 1473, 2090
AluI AGCT 6 cut(s) 173, 507, 640, 1214, 1473, 2090
Alw26I GTCTC 5 cut(s) 204, 1100, 1622, 2006, 2138
AlwI GGATC 6 cut(s) 557, 560, 584, 597, 902, 1549
AlwNI CAGNNNCTG 1 cut(s) 1214
Ama87I CYCGRG 2 cut(s) 95, 1981
Aor51HI AGCGCT 1 cut(s) 1961
AoxI GGCC 3 cut(s) 33, 666, 1086
ApeKI GCWGC 5 cut(s) 173, 1198, 1520, 1787, 2063
ApoI RAATTY 2 cut(s) 259, 880
Asp700I GAANNNNTTC 2 cut(s) 324, 869
Asp718I GGTACC 1 cut(s) 1965
AspA2I CCTAGG 1 cut(s) 1895
AspLEI GCGC 3 cut(s) 333, 1962, 2178
AspS9I GGNCC 2 cut(s) 388, 1987
AsuC2I CCSGG 3 cut(s) 1331, 1772, 2168
AsuHPI GGTGA 2 cut(s) 1830, 2015
AvaI CYCGRG 2 cut(s) 95, 1981
AvaII GGWCC 2 cut(s) 388, 1987
AvrII CCTAGG 1 cut(s) 1895
BalI TGGCCA 1 cut(s) 35
BamHI GGATCC 1 cut(s) 589
BanI GGYRCC 2 cut(s) 1965, 2104
BauI CACGAG 2 cut(s) 1436, 1619
BbsI GAAGAC 3 cut(s) 141, 327, 1143
BbvI GCAGC 5 cut(s) 160, 1210, 1507, 1774, 2050
BccI CCATC 4 cut(s) 344, 1169, 1452, 1633
BcgI CGANNNNNNTGC 4 cut(s) 194, 228, 1779, 1813
BciT130I CCWGG 3 cut(s) 665, 722, 1842
BciVI GTATCC 1 cut(s) 1890
BcnI CCSGG 3 cut(s) 1331, 1772, 2168
BcoDI GTCTC 5 cut(s) 204, 1100, 1622, 2006, 2138
BfaI CTAG 5 cut(s) 897, 1061, 1431, 1896, 2172
BfmI CTRYAG 3 cut(s) 933, 2064, 2142
BfoI RGCGCY 2 cut(s) 1963, 2179
BfrI CTTAAG 2 cut(s) 584, 1082
BfuAI ACCTGC 1 cut(s) 1597
BfuI GTATCC 1 cut(s) 1890
BisI GCNGC 7 cut(s) 174, 1102, 1199, 1521, 1788, 2061, 2064
BlnI CCTAGG 1 cut(s) 1895
BlpI GCTNAGC 1 cut(s) 1215
BlsI GCNGC 7 cut(s) 175, 1103, 1200, 1522, 1789, 2062, 2065
BmcAI AGTACT 1 cut(s) 484
Bme1390I CCNGG 6 cut(s) 665, 722, 1331, 1772, 1842, 2168
Bme18I GGWCC 2 cut(s) 388, 1987
BmeT110I CYCGRG 2 cut(s) 95, 1981
BmgBI CACGTC 1 cut(s) 780
BmgT120I GGNCC 2 cut(s) 388, 1987
BmiI GGNNCC 7 cut(s) 302, 390, 591, 1023, 1967, 1988, 2106
BmrFI CCNGG 6 cut(s) 665, 722, 1331, 1772, 1842, 2168
BmrI ACTGGG 5 cut(s) 410, 536, 625, 1658, 1710
BmsI GCATC 6 cut(s) 291, 1224, 1267, 1277, 1799, 1909
BmuI ACTGGG 5 cut(s) 410, 536, 625, 1658, 1710
BoxI GACNNNNGTC 2 cut(s) 1032, 1407
BpiI GAAGAC 3 cut(s) 141, 327, 1143
Bpu10I CCTNAGC 1 cut(s) 1584
Bpu1102I GCTNAGC 1 cut(s) 1215
BpuEI CTTGAG 1 cut(s) 2030
BpuMI CCSGG 3 cut(s) 1331, 1772, 2168
BsaAI YACGTR 1 cut(s) 854
BsaBI GATNNNNATC 1 cut(s) 366
BsaHI GRCGYC 1 cut(s) 342
BsaI GGTCTC 3 cut(s) 204, 1100, 1622
BsaJI CCNNGG 6 cut(s) 384, 600, 1068, 1883, 1895, 1969
BsaWI WCCGGW 1 cut(s) 71
Bse1I ACTGG 9 cut(s) 36, 405, 542, 620, 682, 770, 1556, 1653, 1716
Bse3DI GCAATG 3 cut(s) 1426, 1493, 1730
Bse8I GATNNNNATC 1 cut(s) 366
BseBI CCWGG 3 cut(s) 665, 722, 1842
BseDI CCNNGG 6 cut(s) 384, 600, 1068, 1883, 1895, 1969
BseGI GGATG 5 cut(s) 355, 730, 1282, 1292, 1900
BseJI GATNNNNATC 1 cut(s) 366
BseMI GCAATG 3 cut(s) 1426, 1493, 1730
BseMII CTCAG 6 cut(s) 446, 1206, 1332, 1587, 1740, 1932
BseNI ACTGG 9 cut(s) 36, 405, 542, 620, 682, 770, 1556, 1653, 1716
BseRI GAGGAG 2 cut(s) 472, 1483
BseXI GCAGC 5 cut(s) 160, 1210, 1507, 1774, 2050
BseYI CCCAGC 1 cut(s) 911
BsgI GTGCAG 2 cut(s) 188, 1625
Bsh1236I CGCG 1 cut(s) 673
BshFI GGCC 3 cut(s) 35, 668, 1088
BshNI GGYRCC 2 cut(s) 1965, 2104
BsiHKCI CYCGRG 2 cut(s) 95, 1981
BsiSI CCGG 4 cut(s) 72, 1331, 1771, 2167
BslFI GGGAC 6 cut(s) 907, 1462, 1475, 1751, 2000, 2060
BsmAI GTCTC 5 cut(s) 204, 1100, 1622, 2006, 2138
BsmFI GGGAC 6 cut(s) 907, 1462, 1475, 1751, 2000, 2060
BsmI GAATGC 2 cut(s) 629, 1845
BsnI GGCC 3 cut(s) 35, 668, 1088
Bso31I GGTCTC 3 cut(s) 204, 1100, 1622
BsoBI CYCGRG 2 cut(s) 95, 1981
Bsp143I GATC 7 cut(s) 552, 562, 589, 899, 907, 1534, 1541
Bsp1720I GCTNAGC 1 cut(s) 1215
BspACI CCGC 7 cut(s) 673, 831, 1101, 1334, 1398, 1598, 2061
BspANI GGCC 3 cut(s) 35, 668, 1088
BspCNI CTCAG 6 cut(s) 447, 1207, 1333, 1586, 1741, 1931
BspFNI CGCG 1 cut(s) 673
BspLI GGNNCC 7 cut(s) 302, 390, 591, 1023, 1967, 1988, 2106
BspMAI CTGCAG 2 cut(s) 2068, 2146
BspMI ACCTGC 1 cut(s) 1597
BspPI GGATC 6 cut(s) 557, 560, 584, 597, 902, 1549
BspQI GCTCTTC 2 cut(s) 404, 1188
BspT107I GGYRCC 2 cut(s) 1965, 2104
BspTI CTTAAG 2 cut(s) 584, 1082
BspTNI GGTCTC 3 cut(s) 204, 1100, 1622
BsrDI GCAATG 3 cut(s) 1426, 1493, 1730
BsrI ACTGG 9 cut(s) 36, 405, 542, 620, 682, 770, 1556, 1653, 1716
BssECI CCNNGG 6 cut(s) 384, 600, 1068, 1883, 1895, 1969
BssMI GATC 7 cut(s) 552, 562, 589, 899, 907, 1534, 1541
BssNI GRCGYC 1 cut(s) 342
BssSI CACGAG 2 cut(s) 1436, 1619
BssT1I CCWWGG 3 cut(s) 600, 1895, 1969
Bst2BI CACGAG 2 cut(s) 1436, 1619
Bst2UI CCWGG 3 cut(s) 665, 722, 1842
Bst6I CTCTTC 3 cut(s) 404, 794, 1188
BstACI GRCGYC 1 cut(s) 342
BstAFI CTTAAG 2 cut(s) 584, 1082
BstAPI GCANNNNNTGC 1 cut(s) 626
BstBAI YACGTR 1 cut(s) 854
BstC8I GCNNGC 2 cut(s) 1943, 2146
BstDEI CTNAG 7 cut(s) 455, 1215, 1341, 1573, 1584, 1749, 1918
BstDSI CCRYGG 2 cut(s) 1068, 1883
BstEII GGTNACC 1 cut(s) 1393
BstF5I GGATG 5 cut(s) 355, 730, 1282, 1292, 1900
BstFNI CGCG 1 cut(s) 673
BstH2I RGCGCY 2 cut(s) 1963, 2179
BstHHI GCGC 3 cut(s) 333, 1962, 2178
BstKTI GATC 7 cut(s) 555, 565, 592, 902, 910, 1537, 1544
BstMAI GTCTC 5 cut(s) 204, 1100, 1622, 2006, 2138
BstMBI GATC 7 cut(s) 552, 562, 589, 899, 907, 1534, 1541
BstMWI GCNNNNNNNGC 3 cut(s) 339, 518, 626
BstNI CCWGG 3 cut(s) 665, 722, 1842
BstNSI RCATGY 1 cut(s) 1945
BstPAI GACNNNNGTC 2 cut(s) 1032, 1407
BstPI GGTNACC 1 cut(s) 1393
BstSCI CCNGG 6 cut(s) 663, 720, 1329, 1770, 1840, 2166
BstSFI CTRYAG 3 cut(s) 933, 2064, 2142
BstUI CGCG 1 cut(s) 673
BstV1I GCAGC 5 cut(s) 160, 1210, 1507, 1774, 2050
BstV2I GAAGAC 3 cut(s) 141, 327, 1143
BstX2I RGATCY 1 cut(s) 589
BstXI CCANNNNNNTGG 1 cut(s) 601
BstYI RGATCY 1 cut(s) 589
BsuI GTATCC 1 cut(s) 1890
BsuRI GGCC 3 cut(s) 35, 668, 1088
BtgI CCRYGG 2 cut(s) 1068, 1883
BtgZI GCGATG 1 cut(s) 375
BtrI CACGTC 1 cut(s) 780
BtsCI GGATG 5 cut(s) 355, 730, 1282, 1292, 1900
BtsI GCAGTG 1 cut(s) 1303
BtsIMutI CAGTG 5 cut(s) 236, 777, 1266, 1303, 2022
BveI ACCTGC 1 cut(s) 1597
Cac8I GCNNGC 2 cut(s) 1943, 2146
CaiI CAGNNNCTG 1 cut(s) 1214
CfoI GCGC 3 cut(s) 333, 1962, 2178
Cfr13I GGNCC 2 cut(s) 388, 1987
CseI GACGC 1 cut(s) 331
Csp6I GTAC 3 cut(s) 483, 851, 1966
CviQI GTAC 3 cut(s) 483, 851, 1966
DdeI CTNAG 7 cut(s) 455, 1215, 1341, 1573, 1584, 1749, 1918
DpnI GATC 7 cut(s) 554, 564, 591, 901, 909, 1536, 1543
DpnII GATC 7 cut(s) 552, 562, 589, 899, 907, 1534, 1541
DraI TTTAAA 1 cut(s) 999
EaeI YGGCCR 1 cut(s) 33
Eam1104I CTCTTC 3 cut(s) 404, 794, 1188
EarI CTCTTC 3 cut(s) 404, 794, 1188
EciI GGCGGA 1 cut(s) 846
Eco130I CCWWGG 3 cut(s) 600, 1895, 1969
Eco31I GGTCTC 3 cut(s) 204, 1100, 1622
Eco47I GGWCC 2 cut(s) 388, 1987
Eco47III AGCGCT 1 cut(s) 1961
Eco57I CTGAAG 3 cut(s) 118, 428, 1134
Eco88I CYCGRG 2 cut(s) 95, 1981
Eco91I GGTNACC 1 cut(s) 1393
EcoO109I RGGNCCY 1 cut(s) 388
EcoO65I GGTNACC 1 cut(s) 1393
EcoRII CCWGG 3 cut(s) 663, 720, 1840
EcoT14I CCWWGG 3 cut(s) 600, 1895, 1969
EcoT22I ATGCAT 2 cut(s) 284, 1282
ErhI CCWWGG 3 cut(s) 600, 1895, 1969
FalI AAGNNNNNCTT 2 cut(s) 491, 523
FaqI GGGAC 6 cut(s) 907, 1462, 1475, 1751, 2000, 2060
FauI CCCGC 1 cut(s) 1591
FauNDI CATATG 3 cut(s) 181, 1282, 2080
FblI GTMKAC 1 cut(s) 939
Fnu4HI GCNGC 7 cut(s) 174, 1102, 1199, 1521, 1788, 2061, 2064
FokI GGATG 5 cut(s) 362, 737, 1289, 1299, 1887
Fsp4HI GCNGC 7 cut(s) 174, 1102, 1199, 1521, 1788, 2061, 2064
FspBI CTAG 5 cut(s) 897, 1061, 1431, 1896, 2172
GlaI GCGC 3 cut(s) 332, 1961, 2177
GluI GCNGC 7 cut(s) 174, 1102, 1199, 1521, 1788, 2061, 2064
GsaI CCCAGC 1 cut(s) 915
HaeII RGCGCY 2 cut(s) 1963, 2179
HaeIII GGCC 3 cut(s) 35, 668, 1088
HapII CCGG 4 cut(s) 72, 1331, 1771, 2167
HgaI GACGC 1 cut(s) 331
HhaI GCGC 3 cut(s) 333, 1962, 2178
Hin1I GRCGYC 1 cut(s) 342
Hin6I GCGC 3 cut(s) 331, 1960, 2176
HinP1I GCGC 3 cut(s) 331, 1960, 2176
HincII GTYRAC 2 cut(s) 1005, 1510
HindII GTYRAC 2 cut(s) 1005, 1510
HindIII AAGCTT 1 cut(s) 638
HinfI GANTC 8 cut(s) 86, 367, 473, 1064, 1358, 1656, 1916, 2020
HpaI GTTAAC 1 cut(s) 1005
HpaII CCGG 4 cut(s) 72, 1331, 1771, 2167
HphI GGTGA 2 cut(s) 1830, 2015
Hpy166II GTNNAC 5 cut(s) 229, 940, 1005, 1266, 1510
Hpy188III TCNNGA 6 cut(s) 286, 371, 1455, 1823, 1920, 2042
Hpy8I GTNNAC 5 cut(s) 229, 940, 1005, 1266, 1510
Hpy99I CGWCG 1 cut(s) 1406
HpyAV CCTTC 8 cut(s) 291, 368, 421, 427, 641, 716, 1384, 1607
HpyCH4IV ACGT 3 cut(s) 779, 853, 1579
HpyF10VI GCNNNNNNNGC 3 cut(s) 339, 518, 626
HpyF3I CTNAG 7 cut(s) 455, 1215, 1341, 1573, 1584, 1749, 1918
HpySE526I ACGT 3 cut(s) 779, 853, 1579
Hsp92I GRCGYC 1 cut(s) 342
HspAI GCGC 3 cut(s) 331, 1960, 2176
KpnI GGTACC 1 cut(s) 1969
KspAI GTTAAC 1 cut(s) 1005
Kzo9I GATC 7 cut(s) 552, 562, 589, 899, 907, 1534, 1541
LguI GCTCTTC 2 cut(s) 404, 1188
LmnI GCTCC 5 cut(s) 783, 1021, 1416, 1470, 1825
Lsp1109I GCAGC 5 cut(s) 160, 1210, 1507, 1774, 2050
LweI GCATC 6 cut(s) 291, 1224, 1267, 1277, 1799, 1909
MaeI CTAG 5 cut(s) 897, 1061, 1431, 1896, 2172
MaeII ACGT 3 cut(s) 779, 853, 1579
MaeIII GTNAC 6 cut(s) 100, 544, 856, 1298, 1393, 1836
MalI GATC 7 cut(s) 554, 564, 591, 901, 909, 1536, 1543
MboI GATC 7 cut(s) 552, 562, 589, 899, 907, 1534, 1541
MfeI CAATTG 1 cut(s) 710
MflI RGATCY 1 cut(s) 589
MlsI TGGCCA 1 cut(s) 35
MluCI AATT 8 cut(s) 186, 259, 710, 880, 1050, 1162, 1826, 1946
MluNI TGGCCA 1 cut(s) 35
MlyI GAGTC 2 cut(s) 1352, 1910
MmeI TCCRAC 1 cut(s) 999
Mox20I TGGCCA 1 cut(s) 35
Mph1103I ATGCAT 2 cut(s) 284, 1282
MroXI GAANNNNTTC 2 cut(s) 324, 869
MscI TGGCCA 1 cut(s) 35
MslI CAYNNNNRTG 3 cut(s) 1227, 1259, 1285
Msp20I TGGCCA 1 cut(s) 35
MspA1I CMGCKG 1 cut(s) 2063
MspCI CTTAAG 2 cut(s) 584, 1082
MspI CCGG 4 cut(s) 72, 1331, 1771, 2167
MspR9I CCNGG 6 cut(s) 665, 722, 1331, 1772, 1842, 2168
MunI CAATTG 1 cut(s) 710
Mva1269I GAATGC 2 cut(s) 629, 1845
MvaI CCWGG 3 cut(s) 665, 722, 1842
MvnI CGCG 1 cut(s) 673
MwoI GCNNNNNNNGC 3 cut(s) 339, 518, 626
NciI CCSGG 3 cut(s) 1331, 1772, 2168
NdeI CATATG 3 cut(s) 181, 1282, 2080
NdeII GATC 7 cut(s) 552, 562, 589, 899, 907, 1534, 1541
NlaIV GGNNCC 7 cut(s) 302, 390, 591, 1023, 1967, 1988, 2106
NmeAIII GCCGAG 1 cut(s) 1077
NmuCI GTSAC 2 cut(s) 1298, 1836
NsiI ATGCAT 2 cut(s) 284, 1282
NspI RCATGY 1 cut(s) 1945
PaeI GCATGC 1 cut(s) 1945
PaeR7I CTCGAG 1 cut(s) 95
PaqCI CACCTGC 1 cut(s) 1597
PciSI GCTCTTC 2 cut(s) 404, 1188
PctI GAATGC 2 cut(s) 629, 1845
PdmI GAANNNNTTC 2 cut(s) 324, 869
PfeI GAWTC 6 cut(s) 86, 367, 473, 1064, 1656, 2020
PflFI GACNNNGTC 1 cut(s) 67
PflMI CCANNNNNTGG 2 cut(s) 250, 761
PkrI GCNGC 7 cut(s) 175, 1103, 1200, 1522, 1789, 2062, 2065
PleI GAGTC 2 cut(s) 1352, 1910
PpsI GAGTC 2 cut(s) 1352, 1910
Ppu21I YACGTR 1 cut(s) 854
PpuMI RGGWCCY 1 cut(s) 388
PshAI GACNNNNGTC 2 cut(s) 1032, 1407
Psp5II RGGWCCY 1 cut(s) 388
Psp6I CCWGG 3 cut(s) 663, 720, 1840
PspEI GGTNACC 1 cut(s) 1393
PspFI CCCAGC 1 cut(s) 911
PspGI CCWGG 3 cut(s) 663, 720, 1840
PspN4I GGNNCC 7 cut(s) 302, 390, 591, 1023, 1967, 1988, 2106
PspPI GGNCC 2 cut(s) 388, 1987
PspPPI RGGWCCY 1 cut(s) 388
PspXI VCTCGAGB 1 cut(s) 95
PstI CTGCAG 2 cut(s) 2068, 2146
PstNI CAGNNNCTG 1 cut(s) 1214
PsuI RGATCY 1 cut(s) 589
PsyI GACNNNGTC 1 cut(s) 67
RsaI GTAC 3 cut(s) 484, 852, 1967
RsaNI GTAC 3 cut(s) 483, 851, 1966
RseI CAYNNNNRTG 3 cut(s) 1227, 1259, 1285
SapI GCTCTTC 2 cut(s) 404, 1188
SatI GCNGC 7 cut(s) 174, 1102, 1199, 1521, 1788, 2061, 2064
Sau3AI GATC 7 cut(s) 552, 562, 589, 899, 907, 1534, 1541
Sau96I GGNCC 2 cut(s) 388, 1987
ScaI AGTACT 1 cut(s) 484
SchI GAGTC 2 cut(s) 1352, 1910
ScrFI CCNGG 6 cut(s) 665, 722, 1331, 1772, 1842, 2168
SfaNI GCATC 6 cut(s) 291, 1224, 1267, 1277, 1799, 1909
SfcI CTRYAG 3 cut(s) 933, 2064, 2142
Sfr274I CTCGAG 1 cut(s) 95
SinI GGWCC 2 cut(s) 388, 1987
SlaI CTCGAG 1 cut(s) 95
SmiMI CAYNNNNRTG 3 cut(s) 1227, 1259, 1285
SmlI CTYRAG 4 cut(s) 95, 584, 1082, 2009
SmoI CTYRAG 4 cut(s) 95, 584, 1082, 2009
SphI GCATGC 1 cut(s) 1945
Sse9I AATT 8 cut(s) 186, 259, 710, 880, 1050, 1162, 1826, 1946
SsiI CCGC 7 cut(s) 673, 831, 1101, 1334, 1398, 1598, 2061
SspI AATATT 2 cut(s) 1926, 2114
SspMI CTAG 5 cut(s) 897, 1061, 1431, 1896, 2172
StyD4I CCNGG 6 cut(s) 663, 720, 1329, 1770, 1840, 2166
StyI CCWWGG 3 cut(s) 600, 1895, 1969
TaiI ACGT 3 cut(s) 782, 856, 1582
TaqI TCGA 5 cut(s) 96, 121, 555, 1036, 1456
TasI AATT 8 cut(s) 186, 259, 710, 880, 1050, 1162, 1826, 1946
TatI WGTACW 1 cut(s) 482
TauI GCSGC 2 cut(s) 1104, 2063
TfiI GAWTC 6 cut(s) 86, 367, 473, 1064, 1656, 2020
TscAI CASTG 5 cut(s) 243, 777, 1273, 1303, 2022
TseFI GTSAC 2 cut(s) 1298, 1836
TseI GCWGC 5 cut(s) 173, 1198, 1520, 1787, 2063
Tsp45I GTSAC 2 cut(s) 1298, 1836
TspGWI ACGGA 1 cut(s) 1900
TspRI CASTG 5 cut(s) 243, 777, 1273, 1303, 2022
Tth111I GACNNNGTC 1 cut(s) 67
Van91I CCANNNNNTGG 2 cut(s) 250, 761
Vha464I CTTAAG 2 cut(s) 584, 1082
VpaK11BI GGWCC 2 cut(s) 388, 1987
XapI RAATTY 2 cut(s) 259, 880
XceI RCATGY 1 cut(s) 1945
XcmI CCANNNNNNNNNTGG 1 cut(s) 777
XhoI CTCGAG 1 cut(s) 95
XmaJI CCTAGG 1 cut(s) 1895
XmiI GTMKAC 1 cut(s) 939
XmnI GAANNNNTTC 2 cut(s) 324, 869
XspI CTAG 5 cut(s) 897, 1061, 1431, 1896, 2172
ZrmI AGTACT 1 cut(s) 484
Zsp2I ATGCAT 2 cut(s) 284, 1282
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.