40S ribosomal protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Ribosomal_S10 | PF00338 | 6 - 50 | 6.4e-14 | Ribosomal protein S10p/S20e |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 437 |
| AccB1I | GGYRCC | 1 cut(s) | 437 |
| AciI | CCGC | 1 cut(s) | 418 |
| AclWI | GGATC | 2 cut(s) | 12, 351 |
| AcoI | YGGCCR | 1 cut(s) | 241 |
| AfaI | GTAC | 4 cut(s) | 91, 164, 439, 458 |
| AgsI | TTSAA | 2 cut(s) | 211, 473 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 189 |
| AjnI | CCWGG | 2 cut(s) | 65, 286 |
| AleI | CACNNNNGTG | 1 cut(s) | 129 |
| AluBI | AGCT | 2 cut(s) | 305, 557 |
| AluI | AGCT | 2 cut(s) | 305, 557 |
| Alw21I | GWGCWC | 2 cut(s) | 126, 372 |
| Alw26I | GTCTC | 2 cut(s) | 78, 519 |
| Alw44I | GTGCAC | 1 cut(s) | 122 |
| AlwI | GGATC | 2 cut(s) | 12, 351 |
| AoxI | GGCC | 1 cut(s) | 241 |
| ApaLI | GTGCAC | 1 cut(s) | 122 |
| ApeKI | GCWGC | 3 cut(s) | 305, 415, 427 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 206 |
| Asp718I | GGTACC | 1 cut(s) | 437 |
| AspS9I | GGNCC | 1 cut(s) | 26 |
| AsuC2I | CCSGG | 2 cut(s) | 396, 568 |
| AsuHPI | GGTGA | 1 cut(s) | 31 |
| AvaII | GGWCC | 1 cut(s) | 26 |
| AxyI | CCTNAGG | 1 cut(s) | 500 |
| BaeGI | GKGCMC | 1 cut(s) | 126 |
| BalI | TGGCCA | 1 cut(s) | 243 |
| BanI | GGYRCC | 1 cut(s) | 437 |
| BauI | CACGAG | 1 cut(s) | 281 |
| Bbv12I | GWGCWC | 2 cut(s) | 126, 372 |
| BbvI | GCAGC | 3 cut(s) | 292, 427, 439 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 34, 68, 431, 465 |
| BciT130I | CCWGG | 2 cut(s) | 67, 288 |
| BcnI | CCSGG | 2 cut(s) | 396, 568 |
| BcoDI | GTCTC | 2 cut(s) | 78, 519 |
| BfaI | CTAG | 1 cut(s) | 350 |
| BisI | GCNGC | 3 cut(s) | 306, 416, 428 |
| BlpI | GCTNAGC | 1 cut(s) | 553 |
| BlsI | GCNGC | 3 cut(s) | 307, 417, 429 |
| Bme1390I | CCNGG | 4 cut(s) | 67, 288, 396, 568 |
| Bme18I | GGWCC | 1 cut(s) | 26 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 189 |
| BmgT120I | GGNCC | 1 cut(s) | 26 |
| BmiI | GGNNCC | 2 cut(s) | 27, 439 |
| BmrFI | CCNGG | 4 cut(s) | 67, 288, 396, 568 |
| BmsI | GCATC | 5 cut(s) | 27, 396, 514, 539, 570 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 553 |
| BpuEI | CTTGAG | 1 cut(s) | 182 |
| BpuMI | CCSGG | 2 cut(s) | 396, 568 |
| BsaAI | YACGTR | 1 cut(s) | 456 |
| BsaBI | GATNNNNATC | 1 cut(s) | 269 |
| Bse1I | ACTGG | 1 cut(s) | 29 |
| Bse21I | CCTNAGG | 1 cut(s) | 500 |
| Bse8I | GATNNNNATC | 1 cut(s) | 269 |
| BseBI | CCWGG | 2 cut(s) | 67, 288 |
| BseGI | GGATG | 2 cut(s) | 42, 505 |
| BseJI | GATNNNNATC | 1 cut(s) | 269 |
| BseNI | ACTGG | 1 cut(s) | 29 |
| BseSI | GKGCMC | 1 cut(s) | 126 |
| BseXI | GCAGC | 3 cut(s) | 292, 427, 439 |
| BsgI | GTGCAG | 2 cut(s) | 38, 291 |
| BshFI | GGCC | 1 cut(s) | 243 |
| BshNI | GGYRCC | 1 cut(s) | 437 |
| BsiHKAI | GWGCWC | 2 cut(s) | 126, 372 |
| BsiSI | CCGG | 2 cut(s) | 396, 567 |
| BslFI | GGGAC | 2 cut(s) | 39, 116 |
| BsmAI | GTCTC | 2 cut(s) | 78, 519 |
| BsmFI | GGGAC | 2 cut(s) | 39, 116 |
| BsnI | GGCC | 1 cut(s) | 243 |
| Bsp1286I | GDGCHC | 2 cut(s) | 126, 372 |
| Bsp143I | GATC | 3 cut(s) | 4, 139, 356 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 553 |
| BspACI | CCGC | 1 cut(s) | 418 |
| BspANI | GGCC | 1 cut(s) | 243 |
| BspLI | GGNNCC | 2 cut(s) | 27, 439 |
| BspPI | GGATC | 2 cut(s) | 12, 351 |
| BspT107I | GGYRCC | 1 cut(s) | 437 |
| BsrI | ACTGG | 1 cut(s) | 29 |
| BssMI | GATC | 3 cut(s) | 4, 139, 356 |
| BssSI | CACGAG | 1 cut(s) | 281 |
| Bst2BI | CACGAG | 1 cut(s) | 281 |
| Bst2UI | CCWGG | 2 cut(s) | 67, 288 |
| Bst4CI | ACNGT | 1 cut(s) | 541 |
| BstBAI | YACGTR | 1 cut(s) | 456 |
| BstC8I | GCNNGC | 2 cut(s) | 303, 559 |
| BstDEI | CTNAG | 3 cut(s) | 218, 500, 553 |
| BstF5I | GGATG | 2 cut(s) | 42, 505 |
| BstKTI | GATC | 3 cut(s) | 7, 142, 359 |
| BstMAI | GTCTC | 2 cut(s) | 78, 519 |
| BstMBI | GATC | 3 cut(s) | 4, 139, 356 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 415, 424, 558 |
| BstNI | CCWGG | 2 cut(s) | 67, 288 |
| BstNSI | RCATGY | 2 cut(s) | 335, 536 |
| BstSCI | CCNGG | 4 cut(s) | 65, 286, 394, 566 |
| BstSLI | GKGCMC | 1 cut(s) | 126 |
| BstSNI | TACGTA | 1 cut(s) | 456 |
| BstV1I | GCAGC | 3 cut(s) | 292, 427, 439 |
| BstX2I | RGATCY | 1 cut(s) | 356 |
| BstYI | RGATCY | 1 cut(s) | 356 |
| Bsu36I | CCTNAGG | 1 cut(s) | 500 |
| BsuRI | GGCC | 1 cut(s) | 243 |
| BtsCI | GGATG | 2 cut(s) | 42, 505 |
| BtsIMutI | CAGTG | 2 cut(s) | 36, 546 |
| Cac8I | GCNNGC | 2 cut(s) | 303, 559 |
| Cfr13I | GGNCC | 1 cut(s) | 26 |
| Csp6I | GTAC | 4 cut(s) | 90, 163, 438, 457 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 468, 503 |
| CviAII | CATG | 4 cut(s) | 99, 332, 434, 533 |
| CviJI | RGCY | 5 cut(s) | 226, 243, 286, 305, 557 |
| CviKI_1 | RGCY | 5 cut(s) | 226, 243, 286, 305, 557 |
| CviQI | GTAC | 4 cut(s) | 90, 163, 438, 457 |
| DdeI | CTNAG | 3 cut(s) | 218, 500, 553 |
| DpnI | GATC | 3 cut(s) | 6, 141, 358 |
| DpnII | GATC | 3 cut(s) | 4, 139, 356 |
| DriI | GACNNNNNGTC | 1 cut(s) | 189 |
| EaeI | YGGCCR | 1 cut(s) | 241 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 189 |
| Eco105I | TACGTA | 1 cut(s) | 456 |
| Eco47I | GGWCC | 1 cut(s) | 26 |
| Eco81I | CCTNAGG | 1 cut(s) | 500 |
| EcoRII | CCWGG | 2 cut(s) | 65, 286 |
| FaeI | CATG | 4 cut(s) | 102, 335, 437, 536 |
| FaiI | YATR | 5 cut(s) | 100, 333, 425, 435, 534 |
| FaqI | GGGAC | 2 cut(s) | 39, 116 |
| FatI | CATG | 4 cut(s) | 98, 331, 433, 532 |
| Fnu4HI | GCNGC | 3 cut(s) | 306, 416, 428 |
| FokI | GGATG | 2 cut(s) | 49, 492 |
| Fsp4HI | GCNGC | 3 cut(s) | 306, 416, 428 |
| FspBI | CTAG | 1 cut(s) | 350 |
| GluI | GCNGC | 3 cut(s) | 306, 416, 428 |
| HaeIII | GGCC | 1 cut(s) | 243 |
| HapII | CCGG | 2 cut(s) | 396, 567 |
| Hin1II | CATG | 4 cut(s) | 102, 335, 437, 536 |
| HincII | GTYRAC | 1 cut(s) | 194 |
| HindII | GTYRAC | 1 cut(s) | 194 |
| HinfI | GANTC | 3 cut(s) | 207, 234, 375 |
| HpaII | CCGG | 2 cut(s) | 396, 567 |
| HphI | GGTGA | 1 cut(s) | 31 |
| Hpy166II | GTNNAC | 4 cut(s) | 13, 124, 194, 544 |
| Hpy188I | TCNGA | 4 cut(s) | 338, 374, 466, 510 |
| Hpy188III | TCNNGA | 2 cut(s) | 199, 350 |
| Hpy8I | GTNNAC | 4 cut(s) | 13, 124, 194, 544 |
| HpyAV | CCTTC | 5 cut(s) | 16, 40, 80, 255, 389 |
| HpyCH4III | ACNGT | 1 cut(s) | 541 |
| HpyCH4IV | ACGT | 2 cut(s) | 455, 475 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 415, 424, 558 |
| HpyF3I | CTNAG | 3 cut(s) | 218, 500, 553 |
| HpySE526I | ACGT | 2 cut(s) | 455, 475 |
| Hsp92II | CATG | 4 cut(s) | 102, 335, 437, 536 |
| KpnI | GGTACC | 1 cut(s) | 441 |
| Kzo9I | GATC | 3 cut(s) | 4, 139, 356 |
| LmnI | GCTCC | 1 cut(s) | 375 |
| LpnPI | CCDG | 7 cut(s) | 42, 52, 79, 91, 273, 300, 409 |
| Lsp1109I | GCAGC | 3 cut(s) | 292, 427, 439 |
| LweI | GCATC | 5 cut(s) | 27, 396, 514, 539, 570 |
| MaeI | CTAG | 1 cut(s) | 350 |
| MaeII | ACGT | 2 cut(s) | 455, 475 |
| MaeIII | GTNAC | 1 cut(s) | 535 |
| MalI | GATC | 3 cut(s) | 6, 141, 358 |
| MboI | GATC | 3 cut(s) | 4, 139, 356 |
| MboII | GAAGA | 1 cut(s) | 523 |
| MflI | RGATCY | 1 cut(s) | 356 |
| MhlI | GDGCHC | 2 cut(s) | 126, 372 |
| MlsI | TGGCCA | 1 cut(s) | 243 |
| MluCI | AATT | 3 cut(s) | 153, 174, 460 |
| MluNI | TGGCCA | 1 cut(s) | 243 |
| MnlI | CCTC | 2 cut(s) | 27, 511 |
| Mox20I | TGGCCA | 1 cut(s) | 243 |
| MroXI | GAANNNNTTC | 1 cut(s) | 206 |
| MscI | TGGCCA | 1 cut(s) | 243 |
| MseI | TTAA | 2 cut(s) | 147, 168 |
| MslI | CAYNNNNRTG | 1 cut(s) | 129 |
| Msp20I | TGGCCA | 1 cut(s) | 243 |
| MspA1I | CMGCKG | 1 cut(s) | 418 |
| MspI | CCGG | 2 cut(s) | 396, 567 |
| MspR9I | CCNGG | 4 cut(s) | 67, 288, 396, 568 |
| MvaI | CCWGG | 2 cut(s) | 67, 288 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 415, 424, 558 |
| NciI | CCSGG | 2 cut(s) | 396, 568 |
| NdeII | GATC | 3 cut(s) | 4, 139, 356 |
| NlaIII | CATG | 4 cut(s) | 102, 335, 437, 536 |
| NlaIV | GGNNCC | 2 cut(s) | 27, 439 |
| NmuCI | GTSAC | 1 cut(s) | 535 |
| NspI | RCATGY | 2 cut(s) | 335, 536 |
| OliI | CACNNNNGTG | 1 cut(s) | 129 |
| PdmI | GAANNNNTTC | 1 cut(s) | 206 |
| PfeI | GAWTC | 3 cut(s) | 207, 234, 375 |
| PfoI | TCCNGGA | 1 cut(s) | 566 |
| PkrI | GCNGC | 3 cut(s) | 307, 417, 429 |
| Ppu21I | YACGTR | 1 cut(s) | 456 |
| Psp6I | CCWGG | 2 cut(s) | 65, 286 |
| PspGI | CCWGG | 2 cut(s) | 65, 286 |
| PspN4I | GGNNCC | 2 cut(s) | 27, 439 |
| PspPI | GGNCC | 1 cut(s) | 26 |
| PsuI | RGATCY | 1 cut(s) | 356 |
| RsaI | GTAC | 4 cut(s) | 91, 164, 439, 458 |
| RsaNI | GTAC | 4 cut(s) | 90, 163, 438, 457 |
| RseI | CAYNNNNRTG | 1 cut(s) | 129 |
| SaqAI | TTAA | 2 cut(s) | 147, 168 |
| SatI | GCNGC | 3 cut(s) | 306, 416, 428 |
| Sau3AI | GATC | 3 cut(s) | 4, 139, 356 |
| Sau96I | GGNCC | 1 cut(s) | 26 |
| ScrFI | CCNGG | 4 cut(s) | 67, 288, 396, 568 |
| SduI | GDGCHC | 2 cut(s) | 126, 372 |
| SetI | ASST | 8 cut(s) | 51, 91, 168, 307, 458, 478, 522, 559 |
| SfaNI | GCATC | 5 cut(s) | 27, 396, 514, 539, 570 |
| SinI | GGWCC | 1 cut(s) | 26 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 129 |
| SmlI | CTYRAG | 1 cut(s) | 197 |
| SmoI | CTYRAG | 1 cut(s) | 197 |
| SnaBI | TACGTA | 1 cut(s) | 456 |
| Sse9I | AATT | 3 cut(s) | 153, 174, 460 |
| SsiI | CCGC | 1 cut(s) | 418 |
| SspMI | CTAG | 1 cut(s) | 350 |
| StyD4I | CCNGG | 4 cut(s) | 65, 286, 394, 566 |
| TaaI | ACNGT | 1 cut(s) | 541 |
| TaiI | ACGT | 2 cut(s) | 458, 478 |
| TaqI | TCGA | 2 cut(s) | 228, 492 |
| TasI | AATT | 3 cut(s) | 153, 174, 460 |
| TfiI | GAWTC | 3 cut(s) | 207, 234, 375 |
| Tru1I | TTAA | 2 cut(s) | 147, 168 |
| Tru9I | TTAA | 2 cut(s) | 147, 168 |
| TscAI | CASTG | 2 cut(s) | 36, 546 |
| TseFI | GTSAC | 1 cut(s) | 535 |
| TseI | GCWGC | 3 cut(s) | 305, 415, 427 |
| Tsp45I | GTSAC | 1 cut(s) | 535 |
| TspDTI | ATGAA | 2 cut(s) | 165, 226 |
| TspRI | CASTG | 2 cut(s) | 36, 546 |
| VneI | GTGCAC | 1 cut(s) | 122 |
| VpaK11BI | GGWCC | 1 cut(s) | 26 |
| XbaI | TCTAGA | 1 cut(s) | 349 |
| XceI | RCATGY | 2 cut(s) | 335, 536 |
| XmnI | GAANNNNTTC | 1 cut(s) | 206 |
| XspI | CTAG | 1 cut(s) | 350 |