Rh3BG341500

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0000030
Physical Location & Seq
Forward (+)
36675132 .. 36676824
1693 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG341500.1

Sequence Viewer

Length: 1281 bp
ATGGGGTTTGGGACACTGCACCAAATCCGCTGTACGAAATTGAACCTCCCATTGTGCCAAATACTGGTTGAAAATTTTGACGTTGCCAACTCATGCATCAAGATACACGGGAGGAACTTGATAGTGACTGAGGAAGACTTTAGGCGCATTATGGGAGTAAGAGGTGGAGGGTGTGATATGGACTTTGAAGGAAGCACCGTTGAGCATGAAATTTTGGCACTGAAGAGGGAGATAGCAGGGAAGGAGAGCGAGATAACCATAGGTGGACTGAGTAGGTTGCTCGTTGAATCTGAATTCGTTGATGACACATATAAGGTCGGCTTTGCCTTGTATGCCCTAGAAACTCTGTTATGCCTAGTAATGAGAGCCCACGTGGATGAACGATACCTTATATCACTGAAGGATCCAGGTGCGCTGTCTTCCAAAAACTGGGCAAAGCTTGCATTTGCGAAGTTGGTTGAAGGGGTGTCATCGTTTCAAGCGCTGCGTTATGGTGTAGTAGGAGGTTGCATTCTGTTCCTTCAGTTGTTCTACCTGGACGTTGTCGGTAAAGGGATTCTACTATTTCCTAGGATTTATAAGCAGGTGATGACTTGGGGCAGGAAGGAGGTAAAGAGGGTTCTGGAAGAAGTTGAGAGCGAGGGCGGATTTAGATGTGAGAATGTGCGAGTAACGAAAAAGAACATCTTTGAGACGACCCATCAAATGTCGGGATTAGTTGATGCTAGTACAGGGATAAGAACTACTCTAGTGGAGGACTTGTCAGAAGTGAGGTCTGATGTAGGTACTGTGAGAGGGGAGATAGAAAATCTGAAGTCAACAGTTGGTCGTTTGGAACCAGACATGGGCCGTTTGAGGAGCAAAATTATGACGCTAGAAACATCTCTTGGCCAACTGAAGGCTGAGGGTATCGGCCACATTGTGGCAGAGGTGATTAGGAAAGTTTTTGAGGACCTCCATAAGGAGTACACGGGTAATGAAGAGAATAATGGTTTTGTCACTAGTCAGAAGCAGCACCACACAGAAGCTGGTCTACATCATGGTGAGATGTGGCAAAGTAAATCTGACATTGGTGTCCTCAATGAGGATGACACAATTGCTAGCCAGAGCACCGACTTCCAGAATATTGGGCAAGGGTTCTTTCCAGTGGTGTCTGAGATTTCGCATAGCGATTCGCACCTACTGACCTATCTCTTCAGCAAGAAGGCACCGGTGAAGACAGTGTTGGGAGCAACGAAGTCGCTAGGTGCGAGGGATGGGCTGTCTCTCGTTGGGATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

426

Amino Acids

47.23

Weight (kDa)

5.95

Isoelectric Point (pI)

34.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 579
AarI CACCTGC 1 cut(s) 574
AasI GACNNNNNNGTC 1 cut(s) 1073
Acc36I ACCTGC 1 cut(s) 574
AccB1I GGYRCC 1 cut(s) 1207
AccB7I CCANNNNNTGG 3 cut(s) 64, 429, 922
AccI GTMKAC 1 cut(s) 1033
AciI CCGC 2 cut(s) 28, 645
AclWI GGATC 2 cut(s) 398, 411
AcoI YGGCCR 2 cut(s) 889, 913
AcsI RAATTY 3 cut(s) 73, 210, 293
AcuI CTGAAG 6 cut(s) 242, 419, 506, 833, 917, 1180
AcvI CACGTG 1 cut(s) 373
AdeI CACNNNGTG 1 cut(s) 922
AfaI GTAC 4 cut(s) 34, 730, 787, 968
AfeI AGCGCT 1 cut(s) 483
AfiI CCNNNNNNNGG 7 cut(s) 64, 429, 845, 898, 922, 961, 1084
AgeI ACCGGT 1 cut(s) 1210
AgsI TTSAA 6 cut(s) 43, 71, 188, 287, 461, 479
AhlI ACTAGT 1 cut(s) 1001
AjnI CCWGG 2 cut(s) 406, 534
AjuI GAANNNNNNNTTGG 4 cut(s) 870, 902, 1208, 1240
AluBI AGCT 2 cut(s) 439, 1028
AluI AGCT 2 cut(s) 439, 1028
Alw21I GWGCWC 1 cut(s) 1112
Alw26I GTCTC 2 cut(s) 686, 1269
AlwI GGATC 2 cut(s) 398, 411
AlwNI CAGNNNCTG 1 cut(s) 1028
Aor51HI AGCGCT 1 cut(s) 483
AoxI GGCC 3 cut(s) 847, 889, 913
ApeKI GCWGC 2 cut(s) 484, 1012
ApoI RAATTY 3 cut(s) 73, 210, 293
AsiGI ACCGGT 1 cut(s) 1210
AspA2I CCTAGG 1 cut(s) 569
AspLEI GCGC 3 cut(s) 147, 415, 484
AspS9I GGNCC 2 cut(s) 847, 952
AsuHPI GGTGA 4 cut(s) 598, 943, 1055, 1225
AsuNHI GCTAGC 1 cut(s) 1100
AvaII GGWCC 1 cut(s) 952
AvrII CCTAGG 1 cut(s) 569
BalI TGGCCA 1 cut(s) 891
BamHI GGATCC 1 cut(s) 403
BanI GGYRCC 1 cut(s) 1207
BanII GRGCYC 1 cut(s) 370
BarI GAAGNNNNNNTAC 2 cut(s) 1017, 1049
BbrPI CACGTG 1 cut(s) 373
BbsI GAAGAC 3 cut(s) 141, 411, 1223
Bbv12I GWGCWC 1 cut(s) 1112
BbvCI CCTCAGC 1 cut(s) 903
BbvI GCAGC 2 cut(s) 471, 1024
BccI CCATC 2 cut(s) 708, 1250
BceAI ACGGC 1 cut(s) 834
BcgI CGANNNNNNTGC 2 cut(s) 1221, 1255
BciT130I CCWGG 2 cut(s) 408, 536
BcoDI GTCTC 2 cut(s) 686, 1269
BcuI ACTAGT 1 cut(s) 1001
BfaI CTAG 9 cut(s) 338, 356, 570, 726, 749, 875, 1002, 1101, 1244
BfoI RGCGCY 1 cut(s) 485
BfuAI ACCTGC 1 cut(s) 574
BisI GCNGC 2 cut(s) 485, 1013
BlnI CCTAGG 1 cut(s) 569
BlsI GCNGC 2 cut(s) 486, 1014
Bme1390I CCNGG 2 cut(s) 408, 536
Bme18I GGWCC 1 cut(s) 952
BmgT120I GGNCC 2 cut(s) 847, 952
BmiI GGNNCC 3 cut(s) 405, 837, 1209
BmrFI CCNGG 2 cut(s) 408, 536
BmrI ACTGGG 1 cut(s) 439
BmsI GCATC 2 cut(s) 105, 712
BmtI GCTAGC 1 cut(s) 1104
BmuI ACTGGG 1 cut(s) 439
BpiI GAAGAC 3 cut(s) 141, 411, 1223
Bpu10I CCTNAGC 1 cut(s) 903
BsaAI YACGTR 1 cut(s) 373
BsaJI CCNNGG 1 cut(s) 569
BsaWI WCCGGW 1 cut(s) 1210
BsaXI ACNNNNNCTCC 2 cut(s) 746, 776
Bsc4I CCNNNNNNNGG 7 cut(s) 64, 429, 845, 898, 922, 961, 1084
Bse118I RCCGGY 1 cut(s) 1210
Bse1I ACTGG 3 cut(s) 69, 434, 1145
BseBI CCWGG 2 cut(s) 408, 536
BseDI CCNNGG 1 cut(s) 569
BseGI GGATG 3 cut(s) 382, 1093, 1261
BseLI CCNNNNNNNGG 7 cut(s) 64, 429, 845, 898, 922, 961, 1084
BseMII CTCAG 4 cut(s) 120, 260, 894, 1146
BseNI ACTGG 3 cut(s) 69, 434, 1145
BseRI GAGGAG 1 cut(s) 871
BseXI GCAGC 2 cut(s) 471, 1024
BshFI GGCC 3 cut(s) 849, 891, 915
BshNI GGYRCC 1 cut(s) 1207
BshTI ACCGGT 1 cut(s) 1210
BsiHKAI GWGCWC 1 cut(s) 1112
BsiSI CCGG 1 cut(s) 1211
BslFI GGGAC 1 cut(s) 25
BslI CCNNNNNNNGG 7 cut(s) 64, 429, 845, 898, 922, 961, 1084
BsmAI GTCTC 2 cut(s) 686, 1269
BsmBI CGTCTC 1 cut(s) 686
BsmFI GGGAC 1 cut(s) 25
BsmI GAATGC 1 cut(s) 510
BsnI GGCC 3 cut(s) 849, 891, 915
Bsp1286I GDGCHC 2 cut(s) 370, 1112
Bsp143I GATC 2 cut(s) 403, 1275
BspACI CCGC 2 cut(s) 28, 645
BspANI GGCC 3 cut(s) 849, 891, 915
BspCNI CTCAG 4 cut(s) 121, 261, 895, 1147
BspLI GGNNCC 3 cut(s) 405, 837, 1209
BspMI ACCTGC 1 cut(s) 574
BspOI GCTAGC 1 cut(s) 1104
BspPI GGATC 2 cut(s) 398, 411
BspT107I GGYRCC 1 cut(s) 1207
BsrFI RCCGGY 1 cut(s) 1210
BsrI ACTGG 3 cut(s) 69, 434, 1145
BssAI RCCGGY 1 cut(s) 1210
BssECI CCNNGG 1 cut(s) 569
BssMI GATC 2 cut(s) 403, 1275
BssT1I CCWWGG 1 cut(s) 569
Bst2UI CCWGG 2 cut(s) 408, 536
Bst4CI ACNGT 4 cut(s) 199, 790, 823, 1222
Bst6I CTCTTC 3 cut(s) 218, 975, 1199
BstAPI GCANNNNNTGC 1 cut(s) 440
BstBAI YACGTR 1 cut(s) 373
BstC8I GCNNGC 2 cut(s) 441, 1102
BstDEI CTNAG 4 cut(s) 129, 269, 903, 1155
BstENI CCTNNNNNAGG 2 cut(s) 959, 1082
BstF5I GGATG 3 cut(s) 382, 1093, 1261
BstH2I RGCGCY 1 cut(s) 485
BstHHI GCGC 3 cut(s) 147, 415, 484
BstKTI GATC 2 cut(s) 406, 1278
BstMAI GTCTC 2 cut(s) 686, 1269
BstMBI GATC 2 cut(s) 403, 1275
BstMWI GCNNNNNNNGC 2 cut(s) 332, 440
BstNI CCWGG 2 cut(s) 408, 536
BstSCI CCNGG 2 cut(s) 406, 534
BstV1I GCAGC 2 cut(s) 471, 1024
BstV2I GAAGAC 3 cut(s) 141, 411, 1223
BstX2I RGATCY 2 cut(s) 403, 1275
BstXI CCANNNNNNTGG 1 cut(s) 1127
BstYI RGATCY 2 cut(s) 403, 1275
BsuRI GGCC 3 cut(s) 849, 891, 915
BtsCI GGATG 3 cut(s) 382, 1093, 1261
BtsI GCAGTG 1 cut(s) 14
BtsIMutI CAGTG 5 cut(s) 14, 218, 395, 1152, 1227
BveI ACCTGC 1 cut(s) 574
Cac8I GCNNGC 2 cut(s) 441, 1102
CaiI CAGNNNCTG 1 cut(s) 1028
CfoI GCGC 3 cut(s) 147, 415, 484
Cfr10I RCCGGY 1 cut(s) 1210
Cfr13I GGNCC 2 cut(s) 847, 952
CseI GACGC 1 cut(s) 880
Csp6I GTAC 4 cut(s) 33, 729, 786, 967
CspAI ACCGGT 1 cut(s) 1210
CviAII CATG 4 cut(s) 93, 206, 844, 1040
CviQI GTAC 4 cut(s) 33, 729, 786, 967
DdeI CTNAG 4 cut(s) 129, 269, 903, 1155
DpnI GATC 2 cut(s) 405, 1277
DpnII GATC 2 cut(s) 403, 1275
DraIII CACNNNGTG 1 cut(s) 922
DrdI GACNNNNNNGTC 1 cut(s) 1073
DseDI GACNNNNNNGTC 1 cut(s) 1073
EaeI YGGCCR 2 cut(s) 889, 913
Eam1104I CTCTTC 3 cut(s) 218, 975, 1199
EarI CTCTTC 3 cut(s) 218, 975, 1199
EciI GGCGGA 1 cut(s) 660
Eco130I CCWWGG 1 cut(s) 569
Eco24I GRGCYC 1 cut(s) 370
Eco47I GGWCC 1 cut(s) 952
Eco47III AGCGCT 1 cut(s) 483
Eco57I CTGAAG 6 cut(s) 242, 419, 506, 833, 917, 1180
Eco72I CACGTG 1 cut(s) 373
EcoNI CCTNNNNNAGG 2 cut(s) 959, 1082
EcoO109I RGGNCCY 1 cut(s) 952
EcoRI GAATTC 1 cut(s) 293
EcoRII CCWGG 2 cut(s) 406, 534
EcoT14I CCWWGG 1 cut(s) 569
EcoT22I ATGCAT 1 cut(s) 98
EcoT38I GRGCYC 1 cut(s) 370
ErhI CCWWGG 1 cut(s) 569
Esp3I CGTCTC 1 cut(s) 686
FaeI CATG 4 cut(s) 96, 209, 847, 1043
FalI AAGNNNNNCTT 4 cut(s) 305, 337, 671, 703
FaqI GGGAC 1 cut(s) 25
FatI CATG 4 cut(s) 92, 205, 843, 1039
FblI GTMKAC 1 cut(s) 1033
Fnu4HI GCNGC 2 cut(s) 485, 1013
FokI GGATG 3 cut(s) 389, 1100, 1268
FriOI GRGCYC 1 cut(s) 370
Fsp4HI GCNGC 2 cut(s) 485, 1013
FspBI CTAG 9 cut(s) 338, 356, 570, 726, 749, 875, 1002, 1101, 1244
GlaI GCGC 3 cut(s) 146, 414, 483
GluI GCNGC 2 cut(s) 485, 1013
HaeII RGCGCY 1 cut(s) 485
HaeIII GGCC 3 cut(s) 849, 891, 915
HapII CCGG 1 cut(s) 1211
HgaI GACGC 1 cut(s) 880
HhaI GCGC 3 cut(s) 147, 415, 484
Hin1II CATG 4 cut(s) 96, 209, 847, 1043
Hin6I GCGC 3 cut(s) 145, 413, 482
HinP1I GCGC 3 cut(s) 145, 413, 482
HincII GTYRAC 1 cut(s) 819
HindII GTYRAC 1 cut(s) 819
HindIII AAGCTT 1 cut(s) 437
HinfI GANTC 3 cut(s) 287, 556, 1172
HpaII CCGG 1 cut(s) 1211
HphI GGTGA 4 cut(s) 598, 943, 1055, 1225
Hpy166II GTNNAC 4 cut(s) 266, 819, 969, 1034
Hpy188I TCNGA 8 cut(s) 292, 766, 778, 813, 1008, 1066, 1156, 1280
Hpy188III TCNNGA 4 cut(s) 100, 623, 711, 1120
Hpy8I GTNNAC 4 cut(s) 266, 819, 969, 1034
HpyAV CCTTC 8 cut(s) 182, 235, 394, 455, 530, 598, 892, 1198
HpyCH4III ACNGT 4 cut(s) 199, 790, 823, 1222
HpyCH4IV ACGT 3 cut(s) 81, 372, 540
HpyCH4V TGCA 4 cut(s) 19, 96, 443, 510
HpyF10VI GCNNNNNNNGC 2 cut(s) 332, 440
HpyF3I CTNAG 4 cut(s) 129, 269, 903, 1155
HpySE526I ACGT 3 cut(s) 81, 372, 540
Hsp92II CATG 4 cut(s) 96, 209, 847, 1043
HspAI GCGC 3 cut(s) 145, 413, 482
Kzo9I GATC 2 cut(s) 403, 1275
LmnI GCTCC 2 cut(s) 858, 1229
Lsp1109I GCAGC 2 cut(s) 471, 1024
LweI GCATC 2 cut(s) 105, 712
MaeI CTAG 9 cut(s) 338, 356, 570, 726, 749, 875, 1002, 1101, 1244
MaeII ACGT 3 cut(s) 81, 372, 540
MaeIII GTNAC 3 cut(s) 124, 670, 997
MalI GATC 2 cut(s) 405, 1277
MboI GATC 2 cut(s) 403, 1275
MboII GAAGA 7 cut(s) 146, 235, 411, 638, 992, 1186, 1228
MfeI CAATTG 1 cut(s) 1095
MflI RGATCY 2 cut(s) 403, 1275
MhlI GDGCHC 2 cut(s) 370, 1112
MlsI TGGCCA 1 cut(s) 891
MluCI AATT 6 cut(s) 38, 73, 210, 293, 864, 1095
MluNI TGGCCA 1 cut(s) 891
Mox20I TGGCCA 1 cut(s) 891
Mph1103I ATGCAT 1 cut(s) 98
MscI TGGCCA 1 cut(s) 891
MslI CAYNNNNRTG 2 cut(s) 375, 1041
Msp20I TGGCCA 1 cut(s) 891
MspA1I CMGCKG 1 cut(s) 30
MspI CCGG 1 cut(s) 1211
MspR9I CCNGG 2 cut(s) 408, 536
MunI CAATTG 1 cut(s) 1095
Mva1269I GAATGC 1 cut(s) 510
MvaI CCWGG 2 cut(s) 408, 536
MwoI GCNNNNNNNGC 2 cut(s) 332, 440
NdeII GATC 2 cut(s) 403, 1275
NheI GCTAGC 1 cut(s) 1100
NlaIII CATG 4 cut(s) 96, 209, 847, 1043
NlaIV GGNNCC 3 cut(s) 405, 837, 1209
NmuCI GTSAC 2 cut(s) 124, 997
NsiI ATGCAT 1 cut(s) 98
PaqCI CACCTGC 1 cut(s) 574
PcsI WCGNNNNNNNCGW 1 cut(s) 1247
PctI GAATGC 1 cut(s) 510
PfeI GAWTC 3 cut(s) 287, 556, 1172
PflFI GACNNNGTC 1 cut(s) 542
PflMI CCANNNNNTGG 3 cut(s) 64, 429, 922
PinAI ACCGGT 1 cut(s) 1210
PkrI GCNGC 2 cut(s) 486, 1014
PmaCI CACGTG 1 cut(s) 373
PmlI CACGTG 1 cut(s) 373
Ppu21I YACGTR 1 cut(s) 373
PpuMI RGGWCCY 1 cut(s) 952
PsiI TTATAA 1 cut(s) 579
Psp5II RGGWCCY 1 cut(s) 952
Psp6I CCWGG 2 cut(s) 406, 534
PspCI CACGTG 1 cut(s) 373
PspGI CCWGG 2 cut(s) 406, 534
PspN4I GGNNCC 3 cut(s) 405, 837, 1209
PspPI GGNCC 2 cut(s) 847, 952
PspPPI RGGWCCY 1 cut(s) 952
PsrI GAACNNNNNNTAC 2 cut(s) 603, 635
PstNI CAGNNNCTG 1 cut(s) 1028
PsuI RGATCY 2 cut(s) 403, 1275
PsyI GACNNNGTC 1 cut(s) 542
RsaI GTAC 4 cut(s) 34, 730, 787, 968
RsaNI GTAC 4 cut(s) 33, 729, 786, 967
RseI CAYNNNNRTG 2 cut(s) 375, 1041
SatI GCNGC 2 cut(s) 485, 1013
Sau3AI GATC 2 cut(s) 403, 1275
Sau96I GGNCC 2 cut(s) 847, 952
ScrFI CCNGG 2 cut(s) 408, 536
SduI GDGCHC 2 cut(s) 370, 1112
SfaNI GCATC 2 cut(s) 105, 712
SgrAI CRCCGGYG 1 cut(s) 1210
SinI GGWCC 1 cut(s) 952
SmiMI CAYNNNNRTG 2 cut(s) 375, 1041
SpeI ACTAGT 1 cut(s) 1001
Sse9I AATT 6 cut(s) 38, 73, 210, 293, 864, 1095
SsiI CCGC 2 cut(s) 28, 645
SspI AATATT 1 cut(s) 1126
SspMI CTAG 9 cut(s) 338, 356, 570, 726, 749, 875, 1002, 1101, 1244
StyD4I CCNGG 2 cut(s) 406, 534
StyI CCWWGG 1 cut(s) 569
TaaI ACNGT 4 cut(s) 199, 790, 823, 1222
TaiI ACGT 3 cut(s) 84, 375, 543
TasI AATT 6 cut(s) 38, 73, 210, 293, 864, 1095
TatI WGTACW 2 cut(s) 728, 966
TfiI GAWTC 3 cut(s) 287, 556, 1172
TscAI CASTG 5 cut(s) 21, 225, 402, 1152, 1227
TseFI GTSAC 2 cut(s) 124, 997
TseI GCWGC 2 cut(s) 484, 1012
Tsp45I GTSAC 2 cut(s) 124, 997
TspDTI ATGAA 3 cut(s) 222, 393, 993
TspRI CASTG 5 cut(s) 21, 225, 402, 1152, 1227
Tth111I GACNNNGTC 1 cut(s) 542
Van91I CCANNNNNTGG 3 cut(s) 64, 429, 922
VpaK11BI GGWCC 1 cut(s) 952
XagI CCTNNNNNAGG 2 cut(s) 959, 1082
XapI RAATTY 3 cut(s) 73, 210, 293
XcmI CCANNNNNNNNNTGG 1 cut(s) 1025
XmaJI CCTAGG 1 cut(s) 569
XmiI GTMKAC 1 cut(s) 1033
XspI CTAG 9 cut(s) 338, 356, 570, 726, 749, 875, 1002, 1101, 1244
Zsp2I ATGCAT 1 cut(s) 98
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.