Rmu_sc0002045.1_g000030

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002045.1
OG0000030
Physical Location & Seq
Reverse (-)
153744 .. 156983
3240 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002045.1_g000030.1.cds

Sequence Viewer

Length: 2175 bp
atgtctatatgtagggcgggtgtcgcaaataactcgatggttacagcagaatcaccaacgggccatgcaaaggagataggttgttcccttgaagctgaggttgggcatgataatggatgtgataatttggatgagtgtgaagtgagaactgaagattgtctggtcagtcctacagtaggtcgacgcatgaaggaatttgcagcaatatgttctggtttgtcagaagagaagcaaatagcaattgatgctactggttttggggctatatacacgttcaggtgcagcgaactgaatgtccgtctatgccacatgatgtgcaataactttgatgtcgaaaactcaacaatcaagattcacgggagacatttaagggtaacccctgaagacttccgtcatgtaatgagtgtaagggatggtggggcagacgtagatataagtggaagcttggatgcacctgacattgtagagttgaaggctaaatttggtggtgctgacaaggaaataagcttggatgctgtggggaagatggtggtgcaatcagaaaatgctgatgatacatttataatcagtttctgtctgtatgccctgtcaactattattatgccaactgaaagtgatgcagtggatcccaggctacttatcgctgtaaaggatccaaaaacaattagcaccaaaaattgggcgtcctttgcatttagaaatcttattgatggacttagaaggtataagaatggggtggcatcaatggtctatgggtgtattgcatttttgcagctgttctatttggatacaatgctaatgaagtttcttgttgttccgacatacacatcaccggtactctgttggaataacaagcaggcaagaataatgtacgaccaggcagaggcgaatgggggttattactctactggtataatagcgacgaagcgttggtcaacaactcgattccttgacaatgccggatctgttgatgccagtacagggctgaaaacaacaattgttgaagatctagataaggttaagagcgatgttgaaggtttcaaaagcgaatttgaggaggttagatcttgcatatcgcatatagaaccggacatggtcggcctccgcaatgctattatgacactacagacttgtatttctgaaatgagggacgaagggattaataacatggttgttgaagtgatgaaggaagtgtttgatgaggagtgtccaattgggcacagagaggggggtgaatgtgatatgtttgaagatgacatagttatccgtaaggcgggatcgtcaagtgttgttgggcctcatcagcctaataagtttgataatgaggacagaagcgcgtcattgaagcgaaagtcagaaaacagtgatgaagatgaaaacatgatgctgaatttatgtggagttgctgatatatcaaatagtgaatcgttcttgattacgtacttattcagcaaggtcatgactgagtctgacagtcttgcaagggaagttgcaaggtatggcgatcatagtatctctcgatgggacctatgttgcctttcaccgatgcaggctatcacaagcgaggtgaacgcagaacgggctaaggattacgcaagtggtagtgttgtggacggtatgctatcgtcagtgctgactgtatgtcggcttcgtagatataccggtcgtttgggttcttgcaagcagatatttttccccctccatgacggtgttgtggacaaatggatcttagtggttttgaacctcgatgtgggagaatgtgagatttgggacagctgccccgacattcatggcagacagcgtcaggaatcttatgcaaatgctattgtggagctgtttcagaaggtgttttgtaatgcaattagatcgttgccggcattgtatgcaagactagcctcagtgtccacagtgtatccaaaagaaccgcgaccaacccaaacattgaggattctgttcaactcagccgaccagaggatccgtcttgcccttgacatagtcaatcacccaatgaatgcagtccgtgtttttgtatgggcagcagctgctcaggaaactccaattgacgctgcatcacttggacgcgcagcgtacaacggggacctcctctctaattgccatatcccacttgatatttcaggaatcaaatttaaggcacgccgtactgcgaggcactga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

724

Amino Acids

80.25

Weight (kDa)

5.19

Isoelectric Point (pI)

43.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 563
AccB7I CCANNNNNTGG 1 cut(s) 678
AccI GTMKAC 1 cut(s) 181
AccII CGCG 3 cut(s) 1337, 1927, 2082
AciI CCGC 4 cut(s) 17, 1105, 1274, 1925
AclWI GGATC 9 cut(s) 620, 633, 647, 660, 970, 1285, 1733, 1969, 1982
AcsI RAATTY 5 cut(s) 194, 479, 1049, 1390, 2144
AcuI CTGAAG 2 cut(s) 171, 402
AcyI GRCGYC 1 cut(s) 683
AfaI GTAC 6 cut(s) 837, 872, 979, 1442, 2090, 2161
AfiI CCNNNNNNNGG 8 cut(s) 70, 176, 678, 883, 981, 1273, 1750, 1971
AflIII ACRYGT 1 cut(s) 270
AgeI ACCGGT 2 cut(s) 832, 1661
AhdI GACNNNNNGTC 1 cut(s) 1641
AjnI CCWGG 2 cut(s) 629, 876
AjuI GAANNNNNNNTTGG 2 cut(s) 84, 116
AloI GAACNNNNNNTCC 2 cut(s) 279, 311
AluBI AGCT 7 cut(s) 95, 444, 507, 775, 1776, 1834, 2042
AluI AGCT 7 cut(s) 95, 444, 507, 775, 1776, 1834, 2042
Alw26I GTCTC 1 cut(s) 355
AlwI GGATC 9 cut(s) 620, 633, 647, 660, 970, 1285, 1733, 1969, 1982
AlwNI CAGNNNCTG 2 cut(s) 573, 2042
AoxI GGCC 3 cut(s) 61, 1099, 1295
ApeKI GCWGC 9 cut(s) 200, 282, 772, 1776, 2036, 2039, 2042, 2066, 2084
ApoI RAATTY 5 cut(s) 194, 479, 1049, 1390, 2144
ArsI GACNNNNNNTTYG 4 cut(s) 279, 311, 917, 949
AseI ATTAAT 1 cut(s) 1161
AsiGI ACCGGT 2 cut(s) 832, 1661
AspLEI GCGC 2 cut(s) 1337, 2084
AspS9I GGNCC 4 cut(s) 61, 1295, 1525, 2098
AsuHPI GGTGA 6 cut(s) 45, 822, 1244, 1533, 1579, 1994
AvaII GGWCC 2 cut(s) 1525, 2098
BaeGI GKGCMC 1 cut(s) 1221
BamHI GGATCC 3 cut(s) 625, 652, 1974
BarI GAAGNNNNNNTAC 2 cut(s) 1632, 1664
BbsI GAAGAC 1 cut(s) 390
BbvCI CCTCAGC 1 cut(s) 96
BbvI GCAGC 9 cut(s) 212, 294, 784, 1763, 2029, 2048, 2051, 2053, 2096
BccI CCATC 5 cut(s) 31, 407, 520, 704, 1515
BceAI ACGGC 1 cut(s) 2142
BcgI CGANNNNNNTGC 4 cut(s) 15, 49, 1848, 1882
BciT130I CCWGG 2 cut(s) 631, 878
BciVI GTATCC 2 cut(s) 781, 1923
BcoDI GTCTC 1 cut(s) 355
BfaI CTAG 2 cut(s) 1010, 1892
BfmI CTRYAG 2 cut(s) 171, 1124
BfuI GTATCC 2 cut(s) 781, 1923
BglII AGATCT 2 cut(s) 1006, 1064
BisI GCNGC 9 cut(s) 201, 283, 773, 1777, 2037, 2040, 2043, 2067, 2085
BlsI GCNGC 9 cut(s) 202, 284, 774, 1778, 2038, 2041, 2044, 2068, 2086
Bme1390I CCNGG 2 cut(s) 631, 878
Bme18I GGWCC 2 cut(s) 1525, 2098
BmeRI GACNNNNNGTC 1 cut(s) 1641
BmgT120I GGNCC 4 cut(s) 61, 1295, 1525, 2098
BmiI GGNNCC 5 cut(s) 627, 654, 1526, 1976, 2099
BmrFI CCNGG 2 cut(s) 631, 878
BmsI GCATC 9 cut(s) 235, 439, 502, 607, 749, 961, 1374, 1536, 2078
BoxI GACNNNNGTC 1 cut(s) 390
BpiI GAAGAC 1 cut(s) 390
Bpu10I CCTNAGC 3 cut(s) 96, 1584, 2046
BsaAI YACGTR 1 cut(s) 1440
BsaHI GRCGYC 1 cut(s) 683
BsaJI CCNNGG 1 cut(s) 629
BsaWI WCCGGW 3 cut(s) 832, 1087, 1661
Bsc4I CCNNNNNNNGG 8 cut(s) 70, 176, 678, 883, 981, 1273, 1750, 1971
Bse118I RCCGGY 3 cut(s) 832, 1661, 1873
Bse1I ACTGG 3 cut(s) 256, 913, 975
Bse3DI GCAATG 1 cut(s) 1114
BseBI CCWGG 2 cut(s) 631, 878
BseDI CCNNGG 1 cut(s) 629
BseGI GGATG 5 cut(s) 122, 136, 418, 454, 517
BseLI CCNNNNNNNGG 8 cut(s) 70, 176, 678, 883, 981, 1273, 1750, 1971
BseMI GCAATG 1 cut(s) 1114
BseMII CTCAG 5 cut(s) 87, 1455, 1911, 1974, 2060
BseNI ACTGG 3 cut(s) 256, 913, 975
BseRI GAGGAG 3 cut(s) 1070, 1217, 2093
BseSI GKGCMC 1 cut(s) 1221
BseXI GCAGC 9 cut(s) 212, 294, 784, 1763, 2029, 2048, 2051, 2053, 2096
BsgI GTGCAG 1 cut(s) 301
Bsh1236I CGCG 3 cut(s) 1337, 1927, 2082
Bsh1285I CGRYCG 1 cut(s) 1666
BshFI GGCC 3 cut(s) 63, 1101, 1297
BshTI ACCGGT 2 cut(s) 832, 1661
BsiEI CGRYCG 1 cut(s) 1666
BsiSI CCGG 5 cut(s) 833, 960, 1088, 1662, 1874
BslFI GGGAC 4 cut(s) 1163, 1538, 1784, 2111
BslI CCNNNNNNNGG 8 cut(s) 70, 176, 678, 883, 981, 1273, 1750, 1971
BsmAI GTCTC 1 cut(s) 355
BsmFI GGGAC 4 cut(s) 1163, 1538, 1784, 2111
BsmI GAATGC 1 cut(s) 2017
BsnI GGCC 3 cut(s) 63, 1101, 1297
Bsp1286I GDGCHC 1 cut(s) 1221
BspACI CCGC 4 cut(s) 17, 1105, 1274, 1925
BspANI GGCC 3 cut(s) 63, 1101, 1297
BspCNI CTCAG 5 cut(s) 88, 1456, 1910, 1973, 2059
BspFNI CGCG 3 cut(s) 1337, 1927, 2082
BspHI TCATGA 1 cut(s) 1458
BspLI GGNNCC 5 cut(s) 627, 654, 1526, 1976, 2099
BspPI GGATC 9 cut(s) 620, 633, 647, 660, 970, 1285, 1733, 1969, 1982
BsrDI GCAATG 1 cut(s) 1114
BsrFI RCCGGY 3 cut(s) 832, 1661, 1873
BsrI ACTGG 3 cut(s) 256, 913, 975
BssAI RCCGGY 3 cut(s) 832, 1661, 1873
BssECI CCNNGG 1 cut(s) 629
BssNI GRCGYC 1 cut(s) 683
Bst2UI CCWGG 2 cut(s) 631, 878
Bst4CI ACNGT 7 cut(s) 175, 1364, 1475, 1616, 1639, 1709, 1909
Bst6I CTCTTC 1 cut(s) 219
BstACI GRCGYC 1 cut(s) 683
BstAPI GCANNNNNTGC 3 cut(s) 245, 1883, 2042
BstBAI YACGTR 1 cut(s) 1440
BstC8I GCNNGC 5 cut(s) 858, 1551, 1682, 1875, 2155
BstDEI CTNAG 8 cut(s) 96, 716, 1464, 1584, 1729, 1897, 1960, 2046
BstEII GGTNACC 1 cut(s) 373
BstENI CCTNNNNNAGG 1 cut(s) 174
BstF5I GGATG 5 cut(s) 122, 136, 418, 454, 517
BstFNI CGCG 3 cut(s) 1337, 1927, 2082
BstHHI GCGC 2 cut(s) 1337, 2084
BstMAI GTCTC 1 cut(s) 355
BstMCI CGRYCG 1 cut(s) 1666
BstMWI GCNNNNNNNGC 8 cut(s) 23, 245, 689, 1303, 1580, 1883, 1892, 2042
BstNI CCWGG 2 cut(s) 631, 878
BstPAI GACNNNNGTC 1 cut(s) 390
BstPI GGTNACC 1 cut(s) 373
BstSCI CCNGG 2 cut(s) 629, 876
BstSFI CTRYAG 2 cut(s) 171, 1124
BstSLI GKGCMC 1 cut(s) 1221
BstSNI TACGTA 1 cut(s) 1440
BstUI CGCG 3 cut(s) 1337, 1927, 2082
BstV1I GCAGC 9 cut(s) 212, 294, 784, 1763, 2029, 2048, 2051, 2053, 2096
BstV2I GAAGAC 1 cut(s) 390
BstX2I RGATCY 7 cut(s) 625, 652, 962, 1006, 1064, 1725, 1974
BstYI RGATCY 7 cut(s) 625, 652, 962, 1006, 1064, 1725, 1974
BsuI GTATCC 2 cut(s) 781, 1923
BsuRI GGCC 3 cut(s) 63, 1101, 1297
BtgZI GCGATG 1 cut(s) 1041
BtsCI GGATG 5 cut(s) 122, 136, 418, 454, 517
BtsI GCAGTG 1 cut(s) 627
BtsIMutI CAGTG 6 cut(s) 627, 1369, 1635, 1905, 1914, 2170
Cac8I GCNNGC 5 cut(s) 858, 1551, 1682, 1875, 2155
CaiI CAGNNNCTG 2 cut(s) 573, 2042
CciI TCATGA 1 cut(s) 1458
CfoI GCGC 2 cut(s) 1337, 2084
Cfr10I RCCGGY 3 cut(s) 832, 1661, 1873
Cfr13I GGNCC 4 cut(s) 61, 1295, 1525, 2098
CseI GACGC 6 cut(s) 192, 672, 1326, 1790, 2072, 2088
Csp6I GTAC 6 cut(s) 836, 871, 978, 1441, 2089, 2160
CspAI ACCGGT 2 cut(s) 832, 1661
CviQI GTAC 6 cut(s) 836, 871, 978, 1441, 2089, 2160
DdeI CTNAG 8 cut(s) 96, 716, 1464, 1584, 1729, 1897, 1960, 2046
DriI GACNNNNNGTC 1 cut(s) 1641
Eam1104I CTCTTC 1 cut(s) 219
Eam1105I GACNNNNNGTC 1 cut(s) 1641
EarI CTCTTC 1 cut(s) 219
Eco105I TACGTA 1 cut(s) 1440
Eco47I GGWCC 2 cut(s) 1525, 2098
Eco57I CTGAAG 2 cut(s) 171, 402
Eco91I GGTNACC 1 cut(s) 373
EcoNI CCTNNNNNAGG 1 cut(s) 174
EcoO109I RGGNCCY 2 cut(s) 1525, 2098
EcoO65I GGTNACC 1 cut(s) 373
EcoRII CCWGG 2 cut(s) 629, 876
FaqI GGGAC 4 cut(s) 1163, 1538, 1784, 2111
FauI CCCGC 2 cut(s) 10, 1267
FblI GTMKAC 1 cut(s) 181
Fnu4HI GCNGC 9 cut(s) 201, 283, 773, 1777, 2037, 2040, 2043, 2067, 2085
FokI GGATG 5 cut(s) 129, 143, 425, 461, 524
Fsp4HI GCNGC 9 cut(s) 201, 283, 773, 1777, 2037, 2040, 2043, 2067, 2085
FspBI CTAG 2 cut(s) 1010, 1892
GlaI GCGC 2 cut(s) 1336, 2083
GluI GCNGC 9 cut(s) 201, 283, 773, 1777, 2037, 2040, 2043, 2067, 2085
HaeIII GGCC 3 cut(s) 63, 1101, 1297
HapII CCGG 5 cut(s) 833, 960, 1088, 1662, 1874
HgaI GACGC 6 cut(s) 192, 672, 1326, 1790, 2072, 2088
HhaI GCGC 2 cut(s) 1337, 2084
Hin1I GRCGYC 1 cut(s) 683
Hin6I GCGC 2 cut(s) 1335, 2082
HinP1I GCGC 2 cut(s) 1335, 2082
HincII GTYRAC 3 cut(s) 182, 591, 936
HindII GTYRAC 3 cut(s) 182, 591, 936
HindIII AAGCTT 2 cut(s) 442, 505
HinfI GANTC 8 cut(s) 50, 352, 945, 1424, 1466, 1808, 1948, 2139
HpaII CCGG 5 cut(s) 833, 960, 1088, 1662, 1874
HphI GGTGA 6 cut(s) 45, 822, 1244, 1533, 1579, 1994
Hpy166II GTNNAC 7 cut(s) 182, 591, 936, 1570, 1612, 1717, 1905
Hpy188I TCNGA 7 cut(s) 223, 541, 819, 1141, 1357, 1471, 1842
Hpy188III TCNNGA 8 cut(s) 349, 1010, 1432, 1459, 1518, 1805, 2048, 2136
Hpy8I GTNNAC 7 cut(s) 182, 591, 936, 1570, 1612, 1717, 1905
Hpy99I CGWCG 2 cut(s) 186, 925
HpyAV CCTTC 7 cut(s) 184, 466, 714, 1028, 1148, 1180, 1837
HpyCH4III ACNGT 7 cut(s) 175, 1364, 1475, 1616, 1639, 1709, 1909
HpyCH4IV ACGT 3 cut(s) 272, 426, 1439
HpyF10VI GCNNNNNNNGC 8 cut(s) 23, 245, 689, 1303, 1580, 1883, 1892, 2042
HpyF3I CTNAG 8 cut(s) 96, 716, 1464, 1584, 1729, 1897, 1960, 2046
HpySE526I ACGT 3 cut(s) 272, 426, 1439
Hsp92I GRCGYC 1 cut(s) 683
HspAI GCGC 2 cut(s) 1335, 2082
KroI GCCGGC 1 cut(s) 1873
KroNI GCCGGC 1 cut(s) 1875
LmnI GCTCC 1 cut(s) 1831
Lsp1109I GCAGC 9 cut(s) 212, 294, 784, 1763, 2029, 2048, 2051, 2053, 2096
LweI GCATC 9 cut(s) 235, 439, 502, 607, 749, 961, 1374, 1536, 2078
MaeI CTAG 2 cut(s) 1010, 1892
MaeII ACGT 3 cut(s) 272, 426, 1439
MaeIII GTNAC 2 cut(s) 40, 373
MboII GAAGA 7 cut(s) 164, 236, 395, 535, 1016, 1262, 1382
MfeI CAATTG 4 cut(s) 240, 996, 1212, 2058
MflI RGATCY 7 cut(s) 625, 652, 962, 1006, 1064, 1725, 1974
MhlI GDGCHC 1 cut(s) 1221
MlyI GAGTC 1 cut(s) 1475
MmeI TCCRAC 2 cut(s) 824, 842
MroNI GCCGGC 1 cut(s) 1873
MseI TTAA 4 cut(s) 368, 1020, 1161, 2148
MslI CAYNNNNRTG 2 cut(s) 111, 1707
MspA1I CMGCKG 3 cut(s) 775, 1776, 2042
MspI CCGG 5 cut(s) 833, 960, 1088, 1662, 1874
MspR9I CCNGG 2 cut(s) 631, 878
MunI CAATTG 4 cut(s) 240, 996, 1212, 2058
Mva1269I GAATGC 1 cut(s) 2017
MvaI CCWGG 2 cut(s) 631, 878
MvnI CGCG 3 cut(s) 1337, 1927, 2082
MwoI GCNNNNNNNGC 8 cut(s) 23, 245, 689, 1303, 1580, 1883, 1892, 2042
NaeI GCCGGC 1 cut(s) 1875
NgoMIV GCCGGC 1 cut(s) 1873
NlaIV GGNNCC 5 cut(s) 627, 654, 1526, 1976, 2099
PagI TCATGA 1 cut(s) 1458
PctI GAATGC 1 cut(s) 2017
PdiI GCCGGC 1 cut(s) 1875
PfeI GAWTC 7 cut(s) 50, 352, 945, 1424, 1808, 1948, 2139
PflFI GACNNNGTC 4 cut(s) 1094, 1465, 1800, 1994
PflMI CCANNNNNTGG 1 cut(s) 678
PinAI ACCGGT 2 cut(s) 832, 1661
PkrI GCNGC 9 cut(s) 202, 284, 774, 1778, 2038, 2041, 2044, 2068, 2086
PleI GAGTC 1 cut(s) 1474
PpsI GAGTC 1 cut(s) 1474
Ppu21I YACGTR 1 cut(s) 1440
PpuMI RGGWCCY 2 cut(s) 1525, 2098
PshAI GACNNNNGTC 1 cut(s) 390
PshBI ATTAAT 1 cut(s) 1161
PsiI TTATAA 1 cut(s) 563
Psp5II RGGWCCY 2 cut(s) 1525, 2098
Psp6I CCWGG 2 cut(s) 629, 876
PspEI GGTNACC 1 cut(s) 373
PspGI CCWGG 2 cut(s) 629, 876
PspN4I GGNNCC 5 cut(s) 627, 654, 1526, 1976, 2099
PspPI GGNCC 4 cut(s) 61, 1295, 1525, 2098
PspPPI RGGWCCY 2 cut(s) 1525, 2098
PstNI CAGNNNCTG 2 cut(s) 573, 2042
PsuI RGATCY 7 cut(s) 625, 652, 962, 1006, 1064, 1725, 1974
PsyI GACNNNGTC 4 cut(s) 1094, 1465, 1800, 1994
PvuII CAGCTG 3 cut(s) 775, 1776, 2042
RsaI GTAC 6 cut(s) 837, 872, 979, 1442, 2090, 2161
RsaNI GTAC 6 cut(s) 836, 871, 978, 1441, 2089, 2160
RseI CAYNNNNRTG 2 cut(s) 111, 1707
SalI GTCGAC 1 cut(s) 180
SaqAI TTAA 4 cut(s) 368, 1020, 1161, 2148
SatI GCNGC 9 cut(s) 201, 283, 773, 1777, 2037, 2040, 2043, 2067, 2085
Sau96I GGNCC 4 cut(s) 61, 1295, 1525, 2098
SchI GAGTC 1 cut(s) 1475
ScrFI CCNGG 2 cut(s) 631, 878
SduI GDGCHC 1 cut(s) 1221
SfaNI GCATC 9 cut(s) 235, 439, 502, 607, 749, 961, 1374, 1536, 2078
SfcI CTRYAG 2 cut(s) 171, 1124
SinI GGWCC 2 cut(s) 1525, 2098
SmiMI CAYNNNNRTG 2 cut(s) 111, 1707
SnaBI TACGTA 1 cut(s) 1440
SsiI CCGC 4 cut(s) 17, 1105, 1274, 1925
SspMI CTAG 2 cut(s) 1010, 1892
StyD4I CCNGG 2 cut(s) 629, 876
TaaI ACNGT 7 cut(s) 175, 1364, 1475, 1616, 1639, 1709, 1909
TaiI ACGT 3 cut(s) 275, 429, 1442
TaqI TCGA 6 cut(s) 35, 181, 333, 943, 1519, 1746
TatI WGTACW 1 cut(s) 977
TfiI GAWTC 7 cut(s) 50, 352, 945, 1424, 1808, 1948, 2139
Tru1I TTAA 4 cut(s) 368, 1020, 1161, 2148
Tru9I TTAA 4 cut(s) 368, 1020, 1161, 2148
TscAI CASTG 5 cut(s) 627, 1369, 1635, 1905, 1914
TseI GCWGC 9 cut(s) 200, 282, 772, 1776, 2036, 2039, 2042, 2066, 2084
TspDTI ATGAA 7 cut(s) 203, 815, 1199, 1383, 1389, 1778, 2024
TspGWI ACGGA 5 cut(s) 287, 380, 1256, 1967, 2009
TspRI CASTG 5 cut(s) 627, 1369, 1635, 1905, 1914
Tth111I GACNNNGTC 4 cut(s) 1094, 1465, 1800, 1994
Van91I CCANNNNNTGG 1 cut(s) 678
VpaK11BI GGWCC 2 cut(s) 1525, 2098
VspI ATTAAT 1 cut(s) 1161
XagI CCTNNNNNAGG 1 cut(s) 174
XapI RAATTY 5 cut(s) 194, 479, 1049, 1390, 2144
XbaI TCTAGA 1 cut(s) 1009
XmiI GTMKAC 1 cut(s) 181
XspI CTAG 2 cut(s) 1010, 1892
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.