Rh1BG407100

protein desumoylation

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
Physical Location & Seq
Forward (+)
52955967 .. 52961335
5369 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG407100.1

Sequence Viewer

Length: 1557 bp
ATGAACCGTCGGGTCACTTGCACCAGCAGTGTGCAAGTCACGTGCCTTAACAGACGTTGCCATCCGTTGTTCCCAATTCAATACGAATCCGGAGTTGTTCTTAGCATTCACCCAAAGGAGCTCAAATTCCCCTTTGAACCTCCAAATCCAAAGGAAGCTGTAAAGTGGTTATATCTTGCTTCTTTTCAGGGCCATGTCCGAGCTCAATACCAACTTGCAATTTGTCTGTATCAGGGACGTGGGGCAGATCGTAACATGAAAGAAGCGGTGATGGCGTCAAATAAGGCCTCAAGTGACGACAATAGCGGAAGAATGAAGAGAAGAAAACTCAGAGAAATGTTTCCTGCCAACAAAGGCGCGACCAATGAATCAATTCATGTTAGTACCGGATTTCACATTAGTGTGTTTGAAGGTATGTCTTTGTTGAAGTCTGAAGTAGCTGCGATAAAGTCTGATGAGGGGAGGCTTAGATCAACGCTGGGATGTTTGGAATCCAATATTGAGACATTGAGACAAAAATTAATTGAAGTACAAGACTTAGTCTGTGAACTGAAAGTTGGTGGGATTGAAGGTATTGTTGGTGAGGTAATACATGTTGTGACAACAATGTGGCCAAACACCATGCATAAGGTTGCTGAAAATGTTATACAAACCATGGAGGAGAATGGTGAGCACAATTTGGTGGCTGACATTCGCAAGGAGTCACGAAAGCGGAAATTTTGTCTCAGCTATCCAATTTGGAATTTTAGTCTCAGCCCTCCATTATCATTGGACAGCCGTGCGAAGCACCGAATATGTGAGGAAATCCCTGCAAATGAGGTTGACCGTATGGAAGATAAGAGGGTGACAGGAAAAGGAAAGGGAAAAAATGGTGCTTTGATTGGTCCAATAATGAATTACAATTTGGATGAAGTTGCCCGCAGTGGACAGTTCGGGGTTTCCCATGAGGATATCCAATGTCTTTGGCCAACAGTCCCAATTTCTTCCAAGGTCATAAACATTTGGACTGCGTACATGTCTCAGACCAAGTCCAACTCATGGTTCTTACCTACTTTCTTTGCGGAACAAGCCGGGTCAAATGAGGATCCATCCAATGTACCTGTTTCAATTGCATTAACAATAGTTGCTTGTGGGCTGCAGAGGTTCCATAGGCGGTTGAAGCATTGTGTTGAGATTTTCATCCCATTGTATGATGAAATCGCCGACCATTGGTTTTTGTTGGTTATGAAACTAAAGGAGAAAATTGCTGAGTTGTGGGATAGTGTGCCAGAATTCACATCATTGAATAGACGACTTGAGATAGCAAGAGCCACTATGCTTCTACTGCAGACGGTGTTTGGAAGTGCAATGACGAAGTCCTCAGATGTTTATTACAATTTTCCCTCATTTCGCCTCTCATTTGCAGAGGGTAACCAAACCATAGACAACAAATATGACAGCGGGATCTACATCATGATGCAGATGAAGTGTTATTCGGATAAGTGGTTTGAAGGCGTATGTTTTCAAAAAAAATTTAGAATGACACCTAACCATGTGATGATCATTACCATTTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

518

Amino Acids

58.96

Weight (kDa)

8.74

Isoelectric Point (pI)

47.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_C48 PF02902 345 - 492 7.6e-08 Ulp1 protease family, C-terminal catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1038
AccII CGCG 1 cut(s) 359
AccIII TCCGGA 1 cut(s) 89
AciI CCGC 7 cut(s) 266, 306, 712, 919, 1061, 1153, 1440
AclWI GGATC 3 cut(s) 1079, 1092, 1451
AcoI YGGCCR 2 cut(s) 611, 965
AcsI RAATTY 5 cut(s) 125, 716, 742, 1271, 1511
AcuI CTGAAG 1 cut(s) 453
AcvI CACGTG 1 cut(s) 42
AcyI GRCGYC 1 cut(s) 275
AfaI GTAC 4 cut(s) 385, 531, 1013, 1098
AfiI CCNNNNNNNGG 2 cut(s) 1038, 1209
AflIII ACRYGT 2 cut(s) 592, 1014
AjiI CACGTC 1 cut(s) 239
AjuI GAANNNNNNNTTGG 8 cut(s) 540, 561, 572, 593, 887, 919, 1025, 1057
AleI CACNNNNGTG 1 cut(s) 399
AluBI AGCT 5 cut(s) 121, 158, 203, 440, 729
AluI AGCT 5 cut(s) 121, 158, 203, 440, 729
Alw21I GWGCWC 3 cut(s) 123, 205, 675
Alw26I GTCTC 5 cut(s) 497, 505, 728, 755, 1023
AlwI GGATC 3 cut(s) 1079, 1092, 1451
Aor13HI TCCGGA 1 cut(s) 89
AoxI GGCC 4 cut(s) 190, 285, 611, 965
ApeKI GCWGC 2 cut(s) 440, 1135
ApoI RAATTY 5 cut(s) 125, 716, 742, 1271, 1511
AseI ATTAAT 1 cut(s) 521
Asp700I GAANNNNTTC 2 cut(s) 339, 372
AspLEI GCGC 1 cut(s) 359
AspS9I GGNCC 2 cut(s) 190, 884
AsuC2I CCSGG 1 cut(s) 1072
AsuHPI GGTGA 5 cut(s) 101, 280, 593, 680, 856
AvaII GGWCC 1 cut(s) 884
BalI TGGCCA 2 cut(s) 613, 967
BamHI GGATCC 1 cut(s) 1084
BanII GRGCYC 2 cut(s) 123, 205
BbrPI CACGTG 1 cut(s) 42
Bbv12I GWGCWC 3 cut(s) 123, 205, 675
BbvI GCAGC 2 cut(s) 427, 1122
BccI CCATC 3 cut(s) 69, 265, 1096
BceAI ACGGC 1 cut(s) 762
BclI TGATCA 1 cut(s) 1539
BcnI CCSGG 1 cut(s) 1072
BcoDI GTCTC 5 cut(s) 497, 505, 728, 755, 1023
BfmI CTRYAG 2 cut(s) 1136, 1325
BisI GCNGC 2 cut(s) 441, 1136
BlsI GCNGC 2 cut(s) 442, 1137
Bme1390I CCNGG 1 cut(s) 1072
Bme18I GGWCC 1 cut(s) 884
BmgBI CACGTC 1 cut(s) 239
BmgT120I GGNCC 2 cut(s) 190, 884
BmiI GGNNCC 2 cut(s) 1086, 1145
BmrFI CCNGG 1 cut(s) 1072
BmsI GCATC 1 cut(s) 1446
BpuEI CTTGAG 2 cut(s) 274, 1316
BpuMI CCSGG 1 cut(s) 1072
BsaAI YACGTR 1 cut(s) 42
BsaBI GATNNNNATC 2 cut(s) 1178, 1448
BsaHI GRCGYC 1 cut(s) 275
BsaJI CCNNGG 2 cut(s) 654, 987
BsaWI WCCGGW 2 cut(s) 89, 386
Bsc4I CCNNNNNNNGG 2 cut(s) 1038, 1209
Bse3DI GCAATG 1 cut(s) 1353
Bse8I GATNNNNATC 2 cut(s) 1178, 1448
BseAI TCCGGA 1 cut(s) 89
BseDI CCNNGG 2 cut(s) 654, 987
BseGI GGATG 5 cut(s) 61, 488, 913, 1088, 1179
BseJI GATNNNNATC 2 cut(s) 1178, 1448
BseLI CCNNNNNNNGG 2 cut(s) 1038, 1209
BseMI GCAATG 1 cut(s) 1353
BseMII CTCAG 6 cut(s) 343, 739, 766, 1034, 1239, 1374
BseRI GAGGAG 1 cut(s) 674
BseXI GCAGC 2 cut(s) 427, 1122
BseYI CCCAGC 1 cut(s) 478
Bsh1236I CGCG 1 cut(s) 359
BshFI GGCC 4 cut(s) 192, 287, 613, 967
BsiHKAI GWGCWC 3 cut(s) 123, 205, 675
BsiSI CCGG 3 cut(s) 90, 387, 1071
BslFI GGGAC 2 cut(s) 249, 959
BslI CCNNNNNNNGG 2 cut(s) 1038, 1209
BsmAI GTCTC 5 cut(s) 497, 505, 728, 755, 1023
BsmFI GGGAC 2 cut(s) 249, 959
BsmI GAATGC 1 cut(s) 105
BsnI GGCC 4 cut(s) 192, 287, 613, 967
Bsp1286I GDGCHC 3 cut(s) 123, 205, 675
Bsp13I TCCGGA 1 cut(s) 89
Bsp143I GATC 5 cut(s) 247, 470, 1084, 1443, 1539
Bsp19I CCATGG 1 cut(s) 654
BspACI CCGC 7 cut(s) 266, 306, 712, 919, 1061, 1153, 1440
BspANI GGCC 4 cut(s) 192, 287, 613, 967
BspCNI CTCAG 6 cut(s) 342, 738, 765, 1033, 1240, 1373
BspEI TCCGGA 1 cut(s) 89
BspFNI CGCG 1 cut(s) 359
BspHI TCATGA 1 cut(s) 1452
BspLI GGNNCC 2 cut(s) 1086, 1145
BspMAI CTGCAG 2 cut(s) 1140, 1329
BspPI GGATC 3 cut(s) 1079, 1092, 1451
BsrDI GCAATG 1 cut(s) 1353
BssECI CCNNGG 2 cut(s) 654, 987
BssMI GATC 5 cut(s) 247, 470, 1084, 1443, 1539
BssNI GRCGYC 1 cut(s) 275
BssT1I CCWWGG 2 cut(s) 654, 987
Bst4CI ACNGT 5 cut(s) 8, 827, 930, 973, 1333
Bst6I CTCTTC 1 cut(s) 311
BstACI GRCGYC 1 cut(s) 275
BstBAI YACGTR 1 cut(s) 42
BstC8I GCNNGC 1 cut(s) 919
BstDEI CTNAG 9 cut(s) 101, 329, 467, 538, 725, 752, 1020, 1248, 1360
BstDSI CCRYGG 1 cut(s) 654
BstEII GGTNACC 1 cut(s) 1409
BstF5I GGATG 5 cut(s) 61, 488, 913, 1088, 1179
BstFNI CGCG 1 cut(s) 359
BstHHI GCGC 1 cut(s) 359
BstKTI GATC 5 cut(s) 250, 473, 1087, 1446, 1542
BstMAI GTCTC 5 cut(s) 497, 505, 728, 755, 1023
BstMBI GATC 5 cut(s) 247, 470, 1084, 1443, 1539
BstMWI GCNNNNNNNGC 4 cut(s) 272, 1067, 1159, 1324
BstNSI RCATGY 2 cut(s) 596, 1018
BstPI GGTNACC 1 cut(s) 1409
BstSCI CCNGG 1 cut(s) 1070
BstSFI CTRYAG 2 cut(s) 1136, 1325
BstUI CGCG 1 cut(s) 359
BstV1I GCAGC 2 cut(s) 427, 1122
BstX2I RGATCY 2 cut(s) 1084, 1443
BstYI RGATCY 2 cut(s) 1084, 1443
BsuRI GGCC 4 cut(s) 192, 287, 613, 967
BtgI CCRYGG 1 cut(s) 654
BtrI CACGTC 1 cut(s) 239
BtsCI GGATG 5 cut(s) 61, 488, 913, 1088, 1179
BtsI GCAGTG 2 cut(s) 34, 928
BtsIMutI CAGTG 2 cut(s) 34, 928
Cac8I GCNNGC 1 cut(s) 919
CciI TCATGA 1 cut(s) 1452
CfoI GCGC 1 cut(s) 359
Cfr13I GGNCC 2 cut(s) 190, 884
CseI GACGC 1 cut(s) 264
Csp6I GTAC 4 cut(s) 384, 530, 1012, 1097
CviQI GTAC 4 cut(s) 384, 530, 1012, 1097
DdeI CTNAG 9 cut(s) 101, 329, 467, 538, 725, 752, 1020, 1248, 1360
DpnI GATC 5 cut(s) 249, 472, 1086, 1445, 1541
DpnII GATC 5 cut(s) 247, 470, 1084, 1443, 1539
EaeI YGGCCR 2 cut(s) 611, 965
Eam1104I CTCTTC 1 cut(s) 311
EarI CTCTTC 1 cut(s) 311
Ecl136II GAGCTC 2 cut(s) 121, 203
Eco130I CCWWGG 2 cut(s) 654, 987
Eco147I AGGCCT 1 cut(s) 287
Eco24I GRGCYC 2 cut(s) 123, 205
Eco32I GATATC 1 cut(s) 952
Eco47I GGWCC 1 cut(s) 884
Eco53kI GAGCTC 2 cut(s) 121, 203
Eco57I CTGAAG 1 cut(s) 453
Eco72I CACGTG 1 cut(s) 42
Eco91I GGTNACC 1 cut(s) 1409
EcoICRI GAGCTC 2 cut(s) 121, 203
EcoO65I GGTNACC 1 cut(s) 1409
EcoRI GAATTC 1 cut(s) 1271
EcoRV GATATC 1 cut(s) 952
EcoT14I CCWWGG 2 cut(s) 654, 987
EcoT22I ATGCAT 1 cut(s) 627
EcoT38I GRGCYC 2 cut(s) 123, 205
ErhI CCWWGG 2 cut(s) 654, 987
FaqI GGGAC 2 cut(s) 249, 959
FauI CCCGC 2 cut(s) 926, 1433
FbaI TGATCA 1 cut(s) 1539
Fnu4HI GCNGC 2 cut(s) 441, 1136
FokI GGATG 5 cut(s) 48, 495, 920, 1075, 1166
FriOI GRGCYC 2 cut(s) 123, 205
Fsp4HI GCNGC 2 cut(s) 441, 1136
GlaI GCGC 1 cut(s) 358
GluI GCNGC 2 cut(s) 441, 1136
GsaI CCCAGC 1 cut(s) 482
HaeIII GGCC 4 cut(s) 192, 287, 613, 967
HapII CCGG 3 cut(s) 90, 387, 1071
HgaI GACGC 1 cut(s) 264
HhaI GCGC 1 cut(s) 359
Hin1I GRCGYC 1 cut(s) 275
Hin6I GCGC 1 cut(s) 357
HinP1I GCGC 1 cut(s) 357
HincII GTYRAC 1 cut(s) 823
HindII GTYRAC 1 cut(s) 823
HinfI GANTC 4 cut(s) 86, 368, 491, 701
HpaII CCGG 3 cut(s) 90, 387, 1071
HphI GGTGA 5 cut(s) 101, 280, 593, 680, 856
Hpy166II GTNNAC 3 cut(s) 548, 823, 926
Hpy188I TCNGA 7 cut(s) 200, 332, 433, 454, 1023, 1363, 1477
Hpy188III TCNNGA 3 cut(s) 90, 705, 1453
Hpy8I GTNNAC 3 cut(s) 548, 823, 926
Hpy99I CGWCG 1 cut(s) 12
HpyAV CCTTC 3 cut(s) 404, 563, 1484
HpyCH4III ACNGT 5 cut(s) 8, 827, 930, 973, 1333
HpyCH4IV ACGT 3 cut(s) 41, 55, 238
HpyF10VI GCNNNNNNNGC 4 cut(s) 272, 1067, 1159, 1324
HpyF3I CTNAG 9 cut(s) 101, 329, 467, 538, 725, 752, 1020, 1248, 1360
HpySE526I ACGT 3 cut(s) 41, 55, 238
Hsp92I GRCGYC 1 cut(s) 275
HspAI GCGC 1 cut(s) 357
Kpn2I TCCGGA 1 cut(s) 89
Ksp22I TGATCA 1 cut(s) 1539
Kzo9I GATC 5 cut(s) 247, 470, 1084, 1443, 1539
LmnI GCTCC 1 cut(s) 118
Lsp1109I GCAGC 2 cut(s) 427, 1122
LweI GCATC 1 cut(s) 1446
MaeII ACGT 3 cut(s) 41, 55, 238
MaeIII GTNAC 8 cut(s) 13, 37, 251, 293, 598, 702, 844, 1409
MalI GATC 5 cut(s) 249, 472, 1086, 1445, 1541
MboI GATC 5 cut(s) 247, 470, 1084, 1443, 1539
MboII GAAGA 5 cut(s) 321, 328, 333, 845, 975
MfeI CAATTG 1 cut(s) 1107
MflI RGATCY 2 cut(s) 1084, 1443
MhlI GDGCHC 3 cut(s) 123, 205, 675
MlsI TGGCCA 2 cut(s) 613, 967
MluNI TGGCCA 2 cut(s) 613, 967
MlyI GAGTC 1 cut(s) 710
MmeI TCCRAC 1 cut(s) 1056
Mox20I TGGCCA 2 cut(s) 613, 967
Mph1103I ATGCAT 1 cut(s) 627
MroI TCCGGA 1 cut(s) 89
MroXI GAANNNNTTC 2 cut(s) 339, 372
MscI TGGCCA 2 cut(s) 613, 967
MseI TTAA 3 cut(s) 48, 521, 1115
MslI CAYNNNNRTG 3 cut(s) 399, 401, 1454
Msp20I TGGCCA 2 cut(s) 613, 967
MspA1I CMGCKG 1 cut(s) 1440
MspI CCGG 3 cut(s) 90, 387, 1071
MspR9I CCNGG 1 cut(s) 1072
MunI CAATTG 1 cut(s) 1107
Mva1269I GAATGC 1 cut(s) 105
MvnI CGCG 1 cut(s) 359
MwoI GCNNNNNNNGC 4 cut(s) 272, 1067, 1159, 1324
NciI CCSGG 1 cut(s) 1072
NcoI CCATGG 1 cut(s) 654
NdeII GATC 5 cut(s) 247, 470, 1084, 1443, 1539
NlaIV GGNNCC 2 cut(s) 1086, 1145
NmuCI GTSAC 6 cut(s) 13, 37, 293, 598, 702, 844
NsiI ATGCAT 1 cut(s) 627
NspI RCATGY 2 cut(s) 596, 1018
OliI CACNNNNGTG 1 cut(s) 399
PagI TCATGA 1 cut(s) 1452
PceI AGGCCT 1 cut(s) 287
PciI ACATGT 2 cut(s) 592, 1014
PctI GAATGC 1 cut(s) 105
PdmI GAANNNNTTC 2 cut(s) 339, 372
PfeI GAWTC 3 cut(s) 86, 368, 491
PflFI GACNNNGTC 3 cut(s) 539, 1027, 1354
PflMI CCANNNNNTGG 1 cut(s) 1038
PkrI GCNGC 2 cut(s) 442, 1137
PleI GAGTC 1 cut(s) 709
PmaCI CACGTG 1 cut(s) 42
PmlI CACGTG 1 cut(s) 42
PpsI GAGTC 1 cut(s) 709
Ppu21I YACGTR 1 cut(s) 42
PscI ACATGT 2 cut(s) 592, 1014
PshBI ATTAAT 1 cut(s) 521
Psp124BI GAGCTC 2 cut(s) 123, 205
PspCI CACGTG 1 cut(s) 42
PspEI GGTNACC 1 cut(s) 1409
PspFI CCCAGC 1 cut(s) 478
PspN4I GGNNCC 2 cut(s) 1086, 1145
PspPI GGNCC 2 cut(s) 190, 884
PstI CTGCAG 2 cut(s) 1140, 1329
PsuI RGATCY 2 cut(s) 1084, 1443
PsyI GACNNNGTC 3 cut(s) 539, 1027, 1354
RsaI GTAC 4 cut(s) 385, 531, 1013, 1098
RsaNI GTAC 4 cut(s) 384, 530, 1012, 1097
RseI CAYNNNNRTG 3 cut(s) 399, 401, 1454
SacI GAGCTC 2 cut(s) 123, 205
SaqAI TTAA 3 cut(s) 48, 521, 1115
SatI GCNGC 2 cut(s) 441, 1136
Sau3AI GATC 5 cut(s) 247, 470, 1084, 1443, 1539
Sau96I GGNCC 2 cut(s) 190, 884
SchI GAGTC 1 cut(s) 710
ScrFI CCNGG 1 cut(s) 1072
SduI GDGCHC 3 cut(s) 123, 205, 675
SfaNI GCATC 1 cut(s) 1446
SfcI CTRYAG 2 cut(s) 1136, 1325
SinI GGWCC 1 cut(s) 884
SmiMI CAYNNNNRTG 3 cut(s) 399, 401, 1454
SmlI CTYRAG 2 cut(s) 289, 1295
SmoI CTYRAG 2 cut(s) 289, 1295
SseBI AGGCCT 1 cut(s) 287
SsiI CCGC 7 cut(s) 266, 306, 712, 919, 1061, 1153, 1440
SspI AATATT 1 cut(s) 499
SstI GAGCTC 2 cut(s) 123, 205
StuI AGGCCT 1 cut(s) 287
StyD4I CCNGG 1 cut(s) 1070
StyI CCWWGG 2 cut(s) 654, 987
TaaI ACNGT 5 cut(s) 8, 827, 930, 973, 1333
TaiI ACGT 3 cut(s) 44, 58, 241
TatI WGTACW 1 cut(s) 529
TfiI GAWTC 3 cut(s) 86, 368, 491
Tru1I TTAA 3 cut(s) 48, 521, 1115
Tru9I TTAA 3 cut(s) 48, 521, 1115
TscAI CASTG 2 cut(s) 34, 928
TseFI GTSAC 6 cut(s) 13, 37, 293, 598, 702, 844
TseI GCWGC 2 cut(s) 440, 1135
Tsp45I GTSAC 6 cut(s) 13, 37, 293, 598, 702, 844
TspGWI ACGGA 1 cut(s) 54
TspRI CASTG 2 cut(s) 34, 928
Tth111I GACNNNGTC 3 cut(s) 539, 1027, 1354
Van91I CCANNNNNTGG 1 cut(s) 1038
VpaK11BI GGWCC 1 cut(s) 884
VspI ATTAAT 1 cut(s) 521
XapI RAATTY 5 cut(s) 125, 716, 742, 1271, 1511
XceI RCATGY 2 cut(s) 596, 1018
XmnI GAANNNNTTC 2 cut(s) 339, 372
Zsp2I ATGCAT 1 cut(s) 627
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.