Rw0G000990

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00030
OG0000030
Physical Location & Seq
Reverse (-)
468 .. 3886
3419 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G000990.1

Sequence Viewer

Length: 2391 bp
ATGAGGTTGAAGACAAGTGAAGGACCGAAAAGAATGATTTCGCTGACTGAGAACGAAGTCACGGAGCCAATAAGTAGTGAGGGCGGCATGCAATCTGACCGGAGTGAAGTGGGGTTTGGCGCAAATAATTCGATGCTTACATTAAAATCATCATCGGGCTGTACAAAGGAGACAGGTTGTTCCCTTGAAGACTCCATAGGACATGATGTTGGGCAGACTAAATTGGATAAGTGTGATGTCATACCTGGAGATTGTCCGGTGAGTCCCATAGTAGGTCGACGCATGAGGGAATTTAGATCAATATGTACTGGATTGTCAGAAGAGAAGAAAATAGCTATAGATGCAACGGGTTTTGGGGCTATATTCACGTTCAGGTGCAGCGAACTGAACGTCCTTTTATGCCACATGATGTGCAACAACTTTGATGTCGAAAAATCAACGATAAAGATTCATGGGAGACATTTAACGGTGACCGCTGAAGATTTCCGCCATGTCATGAGTGTAAGGGATGGTGGGGGTGACGTAGATTTAACAGGAAGCTTGGCTGAACCTGACATTGTTAAGTTGAAGTCCAAATTTTGTGGTGTTGAGGACGAAATAAGCTTGGAAGTTGTGGGGAAGATGGTGGCTGAATCAGAAACTGCCGATGAAACATTTGTAATAAGTTTCTGCCTTTATGCCCTGTCCACTATTATTTTGCCAATTGAAAGTGATGCAGTGGATCCGAGGCTGCTTCTCGCCCTAAAGGATCCAAAAACAATTAGCACAAAAAACTGGGCGTCCTTTGCATTAAGAAATCTTGTTGAAGGAGTTGGAAGGTATAAGAATGGGGTGTCTTCAACTGTGAATGGGTGTATTGCATTTCTGCAGCTTTTCTATTTGGATACAATGCTAATGAAGTTCCTAGTTGTTCCGACATACACATCTCCGGTACTATGTTGGAATAACAAGCAAGCAAGAATTATGTATGATCAAGCAGAGGCTAATGGTGGGTATTACTCGACTGGTATAATAGCGACCAAGCGTTGGTCCACCACTCGATTCCTAGATAATGCCGGATCTGTTGATGCAAGTACAGGACTGAAAACAACTATTGTTGAAGATCTACACAAGGTTAGGAATGATGTTGATGCTTTCAAATGCGAATTTCAGGAGGTTAGATCCTGCATATCTCATATAGAACCGGATATGGTTGGGCTACGCAATGCTATTATGACACTGCAAACATCTATTTGTGAAATGAGGGAGAGAGGGATTAGTAACATGGTTGTAGAAGTGATGAAGGAAGTTCTTGATGAGGAGGGTCCGAGTGACCAAAAAGGGGGGGATGAATTAGATATGTATGAAGATGACATAGTTCCTCGTGACACGGGATTGCCAAGTCTGGGTGGGCGTCATCAACCTAATATGGTTGGTATGGACGACAAAAGGTTCTCGTTGAAGCGAAAATCAGCCAACGAAAGCATGGAACATGATGATATGGTGAAATTTTGTGAAGTTGCTGATATATCGAACAGTGAATCGTTTTTGATTACTTACTTGTTCAGCAAGGTGATGACTGAGTGTGACAGTCTTGGAAGTCGGGAGGTTGCAAGGTATGGAGATCATAGTATCTCTAGATGGGACCTAGGTTGCCTTTCACCGATGCAGTGTATCACAAGTCAGATTGTAGACATATCTGTTTCGTACCTGTTTGACAAACAAAGCGACATATGGTTCATGCCCACATATTTCTCGGAACGTGCTAAAGATTACGCAAGTGGCAGTGTTGTGGACGGTCTGGTATCGTCTGTGGTGACTATATGCCGGCTTCGTAGATATAGTTGCCGATTGGGTTCGTGCAAGCAGATTTTCTTCCCCATGCACGACGAAGTTGTGGATAACTGGTTTTTGGTTGTTTTCAACCCGGATGAGGGAGAATGTGAGATTTGGGACAGCTGCCCCGACAAGGATGCTAGAGAGCGTCGTGAGGCTTATGCAAATGGTGTGATGGACCTTTTTCAGAAGGTTTTCTGTAATCAAATCAGACTACTTCCTGCATTGTATGCAAGACTAGCATCTGTGTGCACAGTTTATCCTAAAGAAGCCCCAACCAACGGAAAGACCGAGGATTCTGGTATATTTTTAATAAGGAACATGCAGTATTACCGGAAACGTTGGTTTGAAGGGTTCAACTCCGCCGACCAGAGGATCCGGCTTGCTGTTGACATAGTCAATCATCCAATGAATGCAGTACGTGTTTCTGTATGGGCAGCAGCAGCTCAGGAAACTCCAATTGATGCAAAATCACTTGGACGTGCAGCGTACAACGGGAACTTCATCCGAGAACGCCATATCCCACTTGATATTTCAGGAATCAAATTTAAGGCCCGTCGCACTGCGAGGCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

796

Amino Acids

89.08

Weight (kDa)

5.4

Isoelectric Point (pI)

41.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1026
AccI GTMKAC 2 cut(s) 277, 1671
AciI CCGC 4 cut(s) 84, 474, 487, 2178
AclI AACGTT 1 cut(s) 2155
AclWI GGATC 8 cut(s) 716, 729, 743, 756, 1066, 1155, 2185, 2198
AcsI RAATTY 5 cut(s) 290, 575, 1145, 1487, 2360
AcuI CTGAAG 1 cut(s) 498
AcyI GRCGYC 2 cut(s) 779, 1393
AfaI GTAC 7 cut(s) 163, 307, 933, 1075, 1688, 2235, 2306
AfiI CCNNNNNNNGG 9 cut(s) 272, 1026, 1321, 1385, 1912, 1913, 1948, 2096, 2187
AflIII ACRYGT 1 cut(s) 2236
AjiI CACGTC 1 cut(s) 2297
AjnI CCWGG 1 cut(s) 244
AjuI GAANNNNNNNTTGG 2 cut(s) 99, 131
AloI GAACNNNNNNTCC 4 cut(s) 375, 407, 2319, 2351
AluBI AGCT 6 cut(s) 335, 540, 603, 871, 1938, 2261
AluI AGCT 6 cut(s) 335, 540, 603, 871, 1938, 2261
Alw21I GWGCWC 1 cut(s) 2069
Alw26I GTCTC 2 cut(s) 164, 451
Alw44I GTGCAC 1 cut(s) 2065
AlwI GGATC 8 cut(s) 716, 729, 743, 756, 1066, 1155, 2185, 2198
AlwNI CAGNNNCTG 1 cut(s) 641
AoxI GGCC 1 cut(s) 2367
ApaLI GTGCAC 1 cut(s) 2065
ApeKI GCWGC 8 cut(s) 378, 730, 868, 1938, 2252, 2255, 2258, 2300
ApoI RAATTY 5 cut(s) 290, 575, 1145, 1487, 2360
ArsI GACNNNNNNTTYG 2 cut(s) 375, 407
Asp700I GAANNNNTTC 2 cut(s) 37, 2009
AspA2I CCTAGG 1 cut(s) 1627
AspLEI GCGC 1 cut(s) 122
AspS9I GGNCC 6 cut(s) 23, 1029, 1304, 1624, 1993, 2368
AsuC2I CCSGG 1 cut(s) 1907
AsuHPI GGTGA 7 cut(s) 271, 481, 530, 1495, 1564, 1632, 1807
AvaII GGWCC 5 cut(s) 23, 1029, 1304, 1624, 1993
AvrII CCTAGG 1 cut(s) 1627
BaeGI GKGCMC 1 cut(s) 2069
BamHI GGATCC 3 cut(s) 721, 748, 2190
BauI CACGAG 1 cut(s) 1362
BbsI GAAGAC 3 cut(s) 17, 195, 828
Bbv12I GWGCWC 1 cut(s) 2069
BbvI GCAGC 8 cut(s) 390, 717, 880, 1925, 2264, 2267, 2270, 2312
BccI CCATC 4 cut(s) 503, 616, 1614, 1984
BcgI CGANNNNNNTGC 4 cut(s) 111, 145, 1934, 1968
BciT130I CCWGG 1 cut(s) 246
BciVI GTATCC 1 cut(s) 877
BclI TGATCA 1 cut(s) 970
BcnI CCSGG 1 cut(s) 1907
BcoDI GTCTC 2 cut(s) 164, 451
BfaI CTAG 6 cut(s) 905, 1046, 1617, 1628, 1956, 2054
BfmI CTRYAG 2 cut(s) 336, 866
BfuI GTATCC 1 cut(s) 877
BglII AGATCT 1 cut(s) 1102
BisI GCNGC 9 cut(s) 85, 379, 731, 869, 1939, 2253, 2256, 2259, 2301
BlnI CCTAGG 1 cut(s) 1627
BlsI GCNGC 9 cut(s) 86, 380, 732, 870, 1940, 2254, 2257, 2260, 2302
Bme1390I CCNGG 2 cut(s) 246, 1907
Bme18I GGWCC 5 cut(s) 23, 1029, 1304, 1624, 1993
BmgBI CACGTC 1 cut(s) 2297
BmgT120I GGNCC 6 cut(s) 23, 1029, 1304, 1624, 1993, 2368
BmiI GGNNCC 6 cut(s) 66, 723, 750, 1305, 1625, 2192
BmrFI CCNGG 2 cut(s) 246, 1907
BmrI ACTGGG 1 cut(s) 784
BmsI GCATC 9 cut(s) 123, 331, 703, 1057, 1120, 1635, 1942, 2066, 2269
BmuI ACTGGG 1 cut(s) 784
BpiI GAAGAC 3 cut(s) 17, 195, 828
BpmI CTGGAG 1 cut(s) 267
Bpu10I CCTNAGC 1 cut(s) 2262
BpuMI CCSGG 1 cut(s) 1907
BsaAI YACGTR 1 cut(s) 2237
BsaHI GRCGYC 2 cut(s) 779, 1393
BsaJI CCNNGG 3 cut(s) 725, 1627, 2106
BsaWI WCCGGW 5 cut(s) 99, 256, 928, 1183, 2148
Bsc4I CCNNNNNNNGG 9 cut(s) 272, 1026, 1321, 1385, 1912, 1913, 1948, 2096, 2187
Bse118I RCCGGY 1 cut(s) 1806
Bse1I ACTGG 4 cut(s) 313, 779, 1009, 1889
Bse3DI GCAATG 1 cut(s) 1210
BseBI CCWGG 1 cut(s) 246
BseDI CCNNGG 3 cut(s) 725, 1627, 2106
BseGI GGATG 6 cut(s) 514, 1333, 1915, 1957, 2218, 2319
BseLI CCNNNNNNNGG 9 cut(s) 272, 1026, 1321, 1385, 1912, 1913, 1948, 2096, 2187
BseMI GCAATG 1 cut(s) 1210
BseMII CTCAG 3 cut(s) 39, 1551, 2276
BseNI ACTGG 4 cut(s) 313, 779, 1009, 1889
BseRI GAGGAG 1 cut(s) 1313
BseSI GKGCMC 1 cut(s) 2069
BseXI GCAGC 8 cut(s) 390, 717, 880, 1925, 2264, 2267, 2270, 2312
BsgI GTGCAG 2 cut(s) 397, 2319
BshFI GGCC 1 cut(s) 2369
BsiHKAI GWGCWC 1 cut(s) 2069
BsiSI CCGG 9 cut(s) 100, 257, 929, 1056, 1184, 1807, 1907, 2149, 2194
BslFI GGGAC 3 cut(s) 249, 1637, 1946
BslI CCNNNNNNNGG 9 cut(s) 272, 1026, 1321, 1385, 1912, 1913, 1948, 2096, 2187
BsmAI GTCTC 2 cut(s) 164, 451
BsmFI GGGAC 3 cut(s) 249, 1637, 1946
BsmI GAATGC 1 cut(s) 2233
BsnI GGCC 1 cut(s) 2369
Bsp1286I GDGCHC 1 cut(s) 2069
Bsp1407I TGTACA 1 cut(s) 161
Bsp143I GATC 9 cut(s) 296, 721, 748, 970, 1058, 1102, 1160, 1603, 2190
BspACI CCGC 4 cut(s) 84, 474, 487, 2178
BspANI GGCC 1 cut(s) 2369
BspCNI CTCAG 3 cut(s) 40, 1552, 2275
BspHI TCATGA 1 cut(s) 495
BspLI GGNNCC 6 cut(s) 66, 723, 750, 1305, 1625, 2192
BspMAI CTGCAG 1 cut(s) 870
BspPI GGATC 8 cut(s) 716, 729, 743, 756, 1066, 1155, 2185, 2198
BsrDI GCAATG 1 cut(s) 1210
BsrFI RCCGGY 1 cut(s) 1806
BsrGI TGTACA 1 cut(s) 161
BsrI ACTGG 4 cut(s) 313, 779, 1009, 1889
BssAI RCCGGY 1 cut(s) 1806
BssECI CCNNGG 3 cut(s) 725, 1627, 2106
BssMI GATC 9 cut(s) 296, 721, 748, 970, 1058, 1102, 1160, 1603, 2190
BssNI GRCGYC 2 cut(s) 779, 1393
BssSI CACGAG 1 cut(s) 1362
BssT1I CCWWGG 1 cut(s) 1627
Bst2BI CACGAG 1 cut(s) 1362
Bst2UI CCWGG 1 cut(s) 246
Bst4CI ACNGT 6 cut(s) 469, 844, 1517, 1571, 1778, 2071
Bst6I CTCTTC 1 cut(s) 315
BstACI GRCGYC 2 cut(s) 779, 1393
BstAPI GCANNNNNTGC 1 cut(s) 2045
BstAUI TGTACA 1 cut(s) 161
BstBAI YACGTR 1 cut(s) 2237
BstC8I GCNNGC 5 cut(s) 89, 954, 1808, 1844, 2199
BstDEI CTNAG 3 cut(s) 48, 1560, 2262
BstEII GGTNACC 1 cut(s) 469
BstF5I GGATG 6 cut(s) 514, 1333, 1915, 1957, 2218, 2319
BstHHI GCGC 1 cut(s) 122
BstKTI GATC 9 cut(s) 299, 724, 751, 973, 1061, 1105, 1163, 1606, 2193
BstMAI GTCTC 2 cut(s) 164, 451
BstMBI GATC 9 cut(s) 296, 721, 748, 970, 1058, 1102, 1160, 1603, 2190
BstMWI GCNNNNNNNGC 5 cut(s) 341, 785, 2045, 2054, 2258
BstNI CCWGG 1 cut(s) 246
BstNSI RCATGY 2 cut(s) 91, 2140
BstPI GGTNACC 1 cut(s) 469
BstSCI CCNGG 2 cut(s) 244, 1905
BstSFI CTRYAG 2 cut(s) 336, 866
BstSLI GKGCMC 1 cut(s) 2069
BstV1I GCAGC 8 cut(s) 390, 717, 880, 1925, 2264, 2267, 2270, 2312
BstV2I GAAGAC 3 cut(s) 17, 195, 828
BstX2I RGATCY 6 cut(s) 721, 748, 1058, 1102, 1160, 2190
BstYI RGATCY 6 cut(s) 721, 748, 1058, 1102, 1160, 2190
BsuI GTATCC 1 cut(s) 877
BsuRI GGCC 1 cut(s) 2369
BtrI CACGTC 1 cut(s) 2297
BtsCI GGATG 6 cut(s) 514, 1333, 1915, 1957, 2218, 2319
BtsI GCAGTG 5 cut(s) 723, 1217, 1655, 1771, 2376
BtsIMutI CAGTG 7 cut(s) 723, 1217, 1522, 1655, 1771, 2376, 2386
Cac8I GCNNGC 5 cut(s) 89, 954, 1808, 1844, 2199
CaiI CAGNNNCTG 1 cut(s) 641
CciI TCATGA 1 cut(s) 495
CfoI GCGC 1 cut(s) 122
Cfr10I RCCGGY 1 cut(s) 1806
Cfr13I GGNCC 6 cut(s) 23, 1029, 1304, 1624, 1993, 2368
CseI GACGC 4 cut(s) 288, 768, 1382, 1952
Csp6I GTAC 7 cut(s) 162, 306, 932, 1074, 1687, 2234, 2305
CspCI CAANNNNNGTGG 2 cut(s) 562, 597
CviQI GTAC 7 cut(s) 162, 306, 932, 1074, 1687, 2234, 2305
DdeI CTNAG 3 cut(s) 48, 1560, 2262
DpnI GATC 9 cut(s) 298, 723, 750, 972, 1060, 1104, 1162, 1605, 2192
DpnII GATC 9 cut(s) 296, 721, 748, 970, 1058, 1102, 1160, 1603, 2190
Eam1104I CTCTTC 1 cut(s) 315
EarI CTCTTC 1 cut(s) 315
EciI GGCGGA 2 cut(s) 476, 2167
Eco130I CCWWGG 1 cut(s) 1627
Eco47I GGWCC 5 cut(s) 23, 1029, 1304, 1624, 1993
Eco57I CTGAAG 1 cut(s) 498
Eco91I GGTNACC 1 cut(s) 469
EcoO109I RGGNCCY 1 cut(s) 1624
EcoO65I GGTNACC 1 cut(s) 469
EcoRII CCWGG 1 cut(s) 244
EcoT14I CCWWGG 1 cut(s) 1627
ErhI CCWWGG 1 cut(s) 1627
FaqI GGGAC 3 cut(s) 249, 1637, 1946
FauNDI CATATG 1 cut(s) 1712
FbaI TGATCA 1 cut(s) 970
FblI GTMKAC 2 cut(s) 277, 1671
Fnu4HI GCNGC 9 cut(s) 85, 379, 731, 869, 1939, 2253, 2256, 2259, 2301
FokI GGATG 6 cut(s) 521, 1340, 1922, 1964, 2205, 2306
Fsp4HI GCNGC 9 cut(s) 85, 379, 731, 869, 1939, 2253, 2256, 2259, 2301
FspBI CTAG 6 cut(s) 905, 1046, 1617, 1628, 1956, 2054
GlaI GCGC 1 cut(s) 121
GluI GCNGC 9 cut(s) 85, 379, 731, 869, 1939, 2253, 2256, 2259, 2301
GsuI CTGGAG 1 cut(s) 267
HaeIII GGCC 1 cut(s) 2369
HapII CCGG 9 cut(s) 100, 257, 929, 1056, 1184, 1807, 1907, 2149, 2194
HgaI GACGC 4 cut(s) 288, 768, 1382, 1952
HhaI GCGC 1 cut(s) 122
Hin1I GRCGYC 2 cut(s) 779, 1393
Hin6I GCGC 1 cut(s) 120
HinP1I GCGC 1 cut(s) 120
HincII GTYRAC 2 cut(s) 278, 2206
HindII GTYRAC 2 cut(s) 278, 2206
HindIII AAGCTT 2 cut(s) 538, 601
HinfI GANTC 8 cut(s) 191, 262, 448, 632, 1041, 1520, 2111, 2355
HpaII CCGG 9 cut(s) 100, 257, 929, 1056, 1184, 1807, 1907, 2149, 2194
HphI GGTGA 7 cut(s) 271, 481, 530, 1495, 1564, 1632, 1807
Hpy166II GTNNAC 7 cut(s) 278, 687, 1032, 1672, 1774, 2067, 2206
Hpy188III TCNNGA 9 cut(s) 496, 1151, 1292, 1364, 1583, 1617, 1967, 2264, 2352
Hpy8I GTNNAC 7 cut(s) 278, 687, 1032, 1672, 1774, 2067, 2206
Hpy99I CGWCG 4 cut(s) 282, 1871, 1968, 2376
HpyAV CCTTC 6 cut(s) 14, 800, 810, 1276, 1999, 2159
HpyCH4III ACNGT 6 cut(s) 469, 844, 1517, 1571, 1778, 2071
HpyCH4IV ACGT 7 cut(s) 368, 390, 522, 1741, 2155, 2236, 2296
HpyF10VI GCNNNNNNNGC 5 cut(s) 341, 785, 2045, 2054, 2258
HpyF3I CTNAG 3 cut(s) 48, 1560, 2262
HpySE526I ACGT 7 cut(s) 368, 390, 522, 1741, 2155, 2236, 2296
Hsp92I GRCGYC 2 cut(s) 779, 1393
HspAI GCGC 1 cut(s) 120
KroI GCCGGC 1 cut(s) 1806
KroNI GCCGGC 1 cut(s) 1808
Ksp22I TGATCA 1 cut(s) 970
Kzo9I GATC 9 cut(s) 296, 721, 748, 970, 1058, 1102, 1160, 1603, 2190
LmnI GCTCC 1 cut(s) 64
Lsp1109I GCAGC 8 cut(s) 390, 717, 880, 1925, 2264, 2267, 2270, 2312
LweI GCATC 9 cut(s) 123, 331, 703, 1057, 1120, 1635, 1942, 2066, 2269
MaeI CTAG 6 cut(s) 905, 1046, 1617, 1628, 1956, 2054
MaeII ACGT 7 cut(s) 368, 390, 522, 1741, 2155, 2236, 2296
MaeIII GTNAC 8 cut(s) 58, 469, 518, 1259, 1310, 1364, 1565, 1795
MalI GATC 9 cut(s) 298, 723, 750, 972, 1060, 1104, 1162, 1605, 2192
MboI GATC 9 cut(s) 296, 721, 748, 970, 1058, 1102, 1160, 1603, 2190
MfeI CAATTG 2 cut(s) 702, 2274
MflI RGATCY 6 cut(s) 721, 748, 1058, 1102, 1160, 2190
MhlI GDGCHC 1 cut(s) 2069
MlyI GAGTC 2 cut(s) 185, 271
MmeI TCCRAC 3 cut(s) 793, 920, 938
MroNI GCCGGC 1 cut(s) 1806
MroXI GAANNNNTTC 2 cut(s) 37, 2009
MseI TTAA 7 cut(s) 143, 464, 530, 561, 791, 2126, 2364
MslI CAYNNNNRTG 1 cut(s) 2062
MspA1I CMGCKG 2 cut(s) 476, 1938
MspI CCGG 9 cut(s) 100, 257, 929, 1056, 1184, 1807, 1907, 2149, 2194
MspR9I CCNGG 2 cut(s) 246, 1907
MunI CAATTG 2 cut(s) 702, 2274
Mva1269I GAATGC 1 cut(s) 2233
MvaI CCWGG 1 cut(s) 246
MwoI GCNNNNNNNGC 5 cut(s) 341, 785, 2045, 2054, 2258
NaeI GCCGGC 1 cut(s) 1808
NciI CCSGG 1 cut(s) 1907
NdeI CATATG 1 cut(s) 1712
NdeII GATC 9 cut(s) 296, 721, 748, 970, 1058, 1102, 1160, 1603, 2190
NgoMIV GCCGGC 1 cut(s) 1806
NlaIV GGNNCC 6 cut(s) 66, 723, 750, 1305, 1625, 2192
NmuCI GTSAC 7 cut(s) 58, 469, 518, 1310, 1364, 1565, 1795
NspI RCATGY 2 cut(s) 91, 2140
PaeI GCATGC 1 cut(s) 91
PagI TCATGA 1 cut(s) 495
PcsI WCGNNNNNNNCGW 1 cut(s) 2103
PctI GAATGC 1 cut(s) 2233
PdiI GCCGGC 1 cut(s) 1808
PdmI GAANNNNTTC 2 cut(s) 37, 2009
PfeI GAWTC 6 cut(s) 448, 632, 1041, 1520, 2111, 2355
PflFI GACNNNGTC 1 cut(s) 2210
PflMI CCANNNNNTGG 1 cut(s) 1026
PkrI GCNGC 9 cut(s) 86, 380, 732, 870, 1940, 2254, 2257, 2260, 2302
PleI GAGTC 2 cut(s) 185, 270
PpsI GAGTC 2 cut(s) 185, 270
Ppu21I YACGTR 1 cut(s) 2237
PpuMI RGGWCCY 1 cut(s) 1624
Psp1406I AACGTT 1 cut(s) 2155
Psp5II RGGWCCY 1 cut(s) 1624
Psp6I CCWGG 1 cut(s) 244
PspEI GGTNACC 1 cut(s) 469
PspGI CCWGG 1 cut(s) 244
PspN4I GGNNCC 6 cut(s) 66, 723, 750, 1305, 1625, 2192
PspPI GGNCC 6 cut(s) 23, 1029, 1304, 1624, 1993, 2368
PspPPI RGGWCCY 1 cut(s) 1624
PstI CTGCAG 1 cut(s) 870
PstNI CAGNNNCTG 1 cut(s) 641
PsuI RGATCY 6 cut(s) 721, 748, 1058, 1102, 1160, 2190
PsyI GACNNNGTC 1 cut(s) 2210
PvuII CAGCTG 1 cut(s) 1938
RsaI GTAC 7 cut(s) 163, 307, 933, 1075, 1688, 2235, 2306
RsaNI GTAC 7 cut(s) 162, 306, 932, 1074, 1687, 2234, 2305
RseI CAYNNNNRTG 1 cut(s) 2062
SalI GTCGAC 1 cut(s) 276
SaqAI TTAA 7 cut(s) 143, 464, 530, 561, 791, 2126, 2364
SatI GCNGC 9 cut(s) 85, 379, 731, 869, 1939, 2253, 2256, 2259, 2301
Sau3AI GATC 9 cut(s) 296, 721, 748, 970, 1058, 1102, 1160, 1603, 2190
Sau96I GGNCC 6 cut(s) 23, 1029, 1304, 1624, 1993, 2368
SchI GAGTC 2 cut(s) 185, 271
ScrFI CCNGG 2 cut(s) 246, 1907
SduI GDGCHC 1 cut(s) 2069
SfaNI GCATC 9 cut(s) 123, 331, 703, 1057, 1120, 1635, 1942, 2066, 2269
SfcI CTRYAG 2 cut(s) 336, 866
SinI GGWCC 5 cut(s) 23, 1029, 1304, 1624, 1993
SmiMI CAYNNNNRTG 1 cut(s) 2062
SphI GCATGC 1 cut(s) 91
SsiI CCGC 4 cut(s) 84, 474, 487, 2178
SspMI CTAG 6 cut(s) 905, 1046, 1617, 1628, 1956, 2054
StyD4I CCNGG 2 cut(s) 244, 1905
StyI CCWWGG 1 cut(s) 1627
TaaI ACNGT 6 cut(s) 469, 844, 1517, 1571, 1778, 2071
TaiI ACGT 7 cut(s) 371, 393, 525, 1744, 2158, 2239, 2299
TaqI TCGA 6 cut(s) 131, 277, 429, 1001, 1039, 1511
TaqII GACCGA 2 cut(s) 40, 2120
TatI WGTACW 3 cut(s) 161, 305, 1073
TauI GCSGC 1 cut(s) 87
TfiI GAWTC 6 cut(s) 448, 632, 1041, 1520, 2111, 2355
Tru1I TTAA 7 cut(s) 143, 464, 530, 561, 791, 2126, 2364
Tru9I TTAA 7 cut(s) 143, 464, 530, 561, 791, 2126, 2364
TscAI CASTG 6 cut(s) 723, 1224, 1522, 1655, 1771, 2383
TseFI GTSAC 7 cut(s) 58, 469, 518, 1310, 1364, 1565, 1795
TseI GCWGC 8 cut(s) 378, 730, 868, 1938, 2252, 2255, 2258, 2300
Tsp45I GTSAC 7 cut(s) 58, 469, 518, 1310, 1364, 1565, 1795
TspDTI ATGAA 9 cut(s) 440, 663, 911, 1295, 1344, 1359, 1708, 2240, 2308
TspGWI ACGGA 2 cut(s) 77, 2112
TspRI CASTG 6 cut(s) 723, 1224, 1522, 1655, 1771, 2383
Tth111I GACNNNGTC 1 cut(s) 2210
Van91I CCANNNNNTGG 1 cut(s) 1026
VneI GTGCAC 1 cut(s) 2065
VpaK11BI GGWCC 5 cut(s) 23, 1029, 1304, 1624, 1993
XapI RAATTY 5 cut(s) 290, 575, 1145, 1487, 2360
XbaI TCTAGA 1 cut(s) 1616
XceI RCATGY 2 cut(s) 91, 2140
XcmI CCANNNNNNNNNTGG 1 cut(s) 1462
XmaJI CCTAGG 1 cut(s) 1627
XmiI GTMKAC 2 cut(s) 277, 1671
XmnI GAANNNNTTC 2 cut(s) 37, 2009
XspI CTAG 6 cut(s) 905, 1046, 1617, 1628, 1956, 2054
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.