Late embryogenesis abundant protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIP49 | PF06068 | 17 - 369 | 3.9e-167 | TIP49 P-loop domain |
| RuvB_N | PF05496 | 40 - 94 | 1.3e-06 | Holliday junction DNA helicase RuvB P-loop domain |
| AAA | PF00004 | 69 - 118 | 1.2e-06 | ATPase family associated with various cellular activities (AAA) |
| TIP49_C | PF17856 | 376 - 441 | 4.3e-19 | TIP49 AAA-lid domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 299 |
| AccI | GTMKAC | 1 cut(s) | 373 |
| AciI | CCGC | 1 cut(s) | 1282 |
| AcsI | RAATTY | 3 cut(s) | 352, 644, 1011 |
| AcuI | CTGAAG | 3 cut(s) | 327, 1131, 1317 |
| AfaI | GTAC | 2 cut(s) | 921, 950 |
| AfeI | AGCGCT | 1 cut(s) | 243 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 230, 299, 764, 1144, 1288, 1318 |
| AgeI | ACCGGT | 1 cut(s) | 1074 |
| AgsI | TTSAA | 5 cut(s) | 520, 590, 656, 955, 1349 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1104 |
| AjnI | CCWGG | 3 cut(s) | 223, 261, 895 |
| AluBI | AGCT | 8 cut(s) | 56, 110, 152, 268, 889, 972, 1231, 1307 |
| AluI | AGCT | 8 cut(s) | 56, 110, 152, 268, 889, 972, 1231, 1307 |
| Alw21I | GWGCWC | 2 cut(s) | 974, 1144 |
| Alw26I | GTCTC | 2 cut(s) | 1215, 1266 |
| Alw44I | GTGCAC | 1 cut(s) | 1140 |
| Aor51HI | AGCGCT | 1 cut(s) | 243 |
| AoxI | GGCC | 2 cut(s) | 76, 90 |
| ApaLI | GTGCAC | 1 cut(s) | 1140 |
| ApeKI | GCWGC | 7 cut(s) | 46, 104, 107, 116, 152, 743, 1354 |
| ApoI | RAATTY | 3 cut(s) | 352, 644, 1011 |
| AsiGI | ACCGGT | 1 cut(s) | 1074 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 24 |
| AspLEI | GCGC | 2 cut(s) | 51, 244 |
| AspS9I | GGNCC | 4 cut(s) | 218, 526, 1072, 1106 |
| AsuHPI | GGTGA | 3 cut(s) | 22, 584, 1093 |
| AvaII | GGWCC | 4 cut(s) | 218, 526, 1072, 1106 |
| BaeGI | GKGCMC | 1 cut(s) | 1144 |
| BanII | GRGCYC | 1 cut(s) | 974 |
| BbsI | GAAGAC | 1 cut(s) | 1323 |
| Bbv12I | GWGCWC | 2 cut(s) | 974, 1144 |
| BbvI | GCAGC | 7 cut(s) | 58, 103, 116, 119, 139, 730, 1366 |
| BceAI | ACGGC | 2 cut(s) | 194, 1208 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 722, 756 |
| BciT130I | CCWGG | 3 cut(s) | 225, 263, 897 |
| BcoDI | GTCTC | 2 cut(s) | 1215, 1266 |
| BfaI | CTAG | 2 cut(s) | 737, 1041 |
| BfoI | RGCGCY | 1 cut(s) | 245 |
| BglII | AGATCT | 1 cut(s) | 1125 |
| BisI | GCNGC | 7 cut(s) | 47, 105, 108, 117, 153, 744, 1355 |
| BlsI | GCNGC | 7 cut(s) | 48, 106, 109, 118, 154, 745, 1356 |
| Bme1390I | CCNGG | 3 cut(s) | 225, 263, 897 |
| Bme18I | GGWCC | 4 cut(s) | 218, 526, 1072, 1106 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1104 |
| BmgT120I | GGNCC | 4 cut(s) | 218, 526, 1072, 1106 |
| BmiI | GGNNCC | 3 cut(s) | 282, 508, 528 |
| BmrFI | CCNGG | 3 cut(s) | 225, 263, 897 |
| BmsI | GCATC | 4 cut(s) | 532, 619, 730, 1312 |
| BpiI | GAAGAC | 1 cut(s) | 1323 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 929, 961 |
| BpmI | CTGGAG | 1 cut(s) | 918 |
| BpuEI | CTTGAG | 2 cut(s) | 107, 744 |
| BsaAI | YACGTR | 1 cut(s) | 377 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1124 |
| BsaJI | CCNNGG | 3 cut(s) | 79, 261, 1186 |
| BsaWI | WCCGGW | 1 cut(s) | 1074 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 230, 299, 764, 1144, 1288, 1318 |
| Bse118I | RCCGGY | 1 cut(s) | 1074 |
| Bse1I | ACTGG | 3 cut(s) | 216, 235, 454 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1124 |
| BseBI | CCWGG | 3 cut(s) | 225, 263, 897 |
| BseDI | CCNNGG | 3 cut(s) | 79, 261, 1186 |
| BseGI | GGATG | 3 cut(s) | 724, 1278, 1327 |
| BseJI | GATNNNNATC | 1 cut(s) | 1124 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 230, 299, 764, 1144, 1288, 1318 |
| BseNI | ACTGG | 3 cut(s) | 216, 235, 454 |
| BseRI | GAGGAG | 1 cut(s) | 1184 |
| BseSI | GKGCMC | 1 cut(s) | 1144 |
| BseXI | GCAGC | 7 cut(s) | 58, 103, 116, 119, 139, 730, 1366 |
| BsgI | GTGCAG | 2 cut(s) | 713, 734 |
| BshFI | GGCC | 2 cut(s) | 78, 92 |
| BshTI | ACCGGT | 1 cut(s) | 1074 |
| BsiHKAI | GWGCWC | 2 cut(s) | 974, 1144 |
| BsiSI | CCGG | 1 cut(s) | 1075 |
| BslFI | GGGAC | 1 cut(s) | 1042 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 230, 299, 764, 1144, 1288, 1318 |
| BsmAI | GTCTC | 2 cut(s) | 1215, 1266 |
| BsmBI | CGTCTC | 1 cut(s) | 1215 |
| BsmFI | GGGAC | 1 cut(s) | 1042 |
| BsmI | GAATGC | 1 cut(s) | 754 |
| BsnI | GGCC | 2 cut(s) | 78, 92 |
| Bsp1286I | GDGCHC | 2 cut(s) | 974, 1144 |
| Bsp143I | GATC | 3 cut(s) | 649, 733, 1125 |
| BspACI | CCGC | 1 cut(s) | 1282 |
| BspANI | GGCC | 2 cut(s) | 78, 92 |
| BspHI | TCATGA | 1 cut(s) | 1373 |
| BspLI | GGNNCC | 3 cut(s) | 282, 508, 528 |
| BspQI | GCTCTTC | 2 cut(s) | 94, 210 |
| BsrFI | RCCGGY | 1 cut(s) | 1074 |
| BsrI | ACTGG | 3 cut(s) | 216, 235, 454 |
| BssAI | RCCGGY | 1 cut(s) | 1074 |
| BssECI | CCNNGG | 3 cut(s) | 79, 261, 1186 |
| BssMI | GATC | 3 cut(s) | 649, 733, 1125 |
| BssT1I | CCWWGG | 2 cut(s) | 79, 1186 |
| Bst2UI | CCWGG | 3 cut(s) | 225, 263, 897 |
| Bst4CI | ACNGT | 2 cut(s) | 499, 599 |
| Bst6I | CTCTTC | 5 cut(s) | 15, 94, 210, 657, 1107 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1139 |
| BstBAI | YACGTR | 1 cut(s) | 377 |
| BstC8I | GCNNGC | 4 cut(s) | 121, 246, 1221, 1246 |
| BstDEI | CTNAG | 2 cut(s) | 1129, 1214 |
| BstF5I | GGATG | 3 cut(s) | 724, 1278, 1327 |
| BstH2I | RGCGCY | 1 cut(s) | 245 |
| BstHHI | GCGC | 2 cut(s) | 51, 244 |
| BstKTI | GATC | 3 cut(s) | 652, 736, 1128 |
| BstMAI | GTCTC | 2 cut(s) | 1215, 1266 |
| BstMBI | GATC | 3 cut(s) | 649, 733, 1125 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 113, 116, 149, 200, 749, 1139 |
| BstNI | CCWGG | 3 cut(s) | 225, 263, 897 |
| BstNSI | RCATGY | 1 cut(s) | 1223 |
| BstSCI | CCNGG | 3 cut(s) | 223, 261, 895 |
| BstSLI | GKGCMC | 1 cut(s) | 1144 |
| BstSNI | TACGTA | 1 cut(s) | 377 |
| BstV1I | GCAGC | 7 cut(s) | 58, 103, 116, 119, 139, 730, 1366 |
| BstV2I | GAAGAC | 1 cut(s) | 1323 |
| BstX2I | RGATCY | 1 cut(s) | 1125 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 269 |
| BstYI | RGATCY | 1 cut(s) | 1125 |
| BsuRI | GGCC | 2 cut(s) | 78, 92 |
| BtsCI | GGATG | 3 cut(s) | 724, 1278, 1327 |
| BtsIMutI | CAGTG | 1 cut(s) | 604 |
| Cac8I | GCNNGC | 4 cut(s) | 121, 246, 1221, 1246 |
| CciI | TCATGA | 1 cut(s) | 1373 |
| CfoI | GCGC | 2 cut(s) | 51, 244 |
| Cfr10I | RCCGGY | 1 cut(s) | 1074 |
| Cfr13I | GGNCC | 4 cut(s) | 218, 526, 1072, 1106 |
| Csp6I | GTAC | 2 cut(s) | 920, 949 |
| CspAI | ACCGGT | 1 cut(s) | 1074 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1233, 1268 |
| CviAII | CATG | 4 cut(s) | 476, 1049, 1220, 1374 |
| CviQI | GTAC | 2 cut(s) | 920, 949 |
| DdeI | CTNAG | 2 cut(s) | 1129, 1214 |
| DpnI | GATC | 3 cut(s) | 651, 735, 1127 |
| DpnII | GATC | 3 cut(s) | 649, 733, 1125 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1104 |
| Eam1104I | CTCTTC | 5 cut(s) | 15, 94, 210, 657, 1107 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1104 |
| EarI | CTCTTC | 5 cut(s) | 15, 94, 210, 657, 1107 |
| Ecl136II | GAGCTC | 1 cut(s) | 972 |
| Eco105I | TACGTA | 1 cut(s) | 377 |
| Eco130I | CCWWGG | 2 cut(s) | 79, 1186 |
| Eco147I | AGGCCT | 1 cut(s) | 78 |
| Eco24I | GRGCYC | 1 cut(s) | 974 |
| Eco47I | GGWCC | 4 cut(s) | 218, 526, 1072, 1106 |
| Eco47III | AGCGCT | 1 cut(s) | 243 |
| Eco53kI | GAGCTC | 1 cut(s) | 972 |
| Eco57I | CTGAAG | 3 cut(s) | 327, 1131, 1317 |
| EcoICRI | GAGCTC | 1 cut(s) | 972 |
| EcoRI | GAATTC | 1 cut(s) | 644 |
| EcoRII | CCWGG | 3 cut(s) | 223, 261, 895 |
| EcoT14I | CCWWGG | 2 cut(s) | 79, 1186 |
| EcoT22I | ATGCAT | 2 cut(s) | 547, 634 |
| EcoT38I | GRGCYC | 1 cut(s) | 974 |
| ErhI | CCWWGG | 2 cut(s) | 79, 1186 |
| Esp3I | CGTCTC | 1 cut(s) | 1215 |
| FaeI | CATG | 4 cut(s) | 479, 1052, 1223, 1377 |
| FaqI | GGGAC | 1 cut(s) | 1042 |
| FatI | CATG | 4 cut(s) | 475, 1048, 1219, 1373 |
| FauNDI | CATATG | 1 cut(s) | 924 |
| FblI | GTMKAC | 1 cut(s) | 373 |
| Fnu4HI | GCNGC | 7 cut(s) | 47, 105, 108, 117, 153, 744, 1355 |
| FokI | GGATG | 3 cut(s) | 731, 1265, 1334 |
| FriOI | GRGCYC | 1 cut(s) | 974 |
| Fsp4HI | GCNGC | 7 cut(s) | 47, 105, 108, 117, 153, 744, 1355 |
| FspBI | CTAG | 2 cut(s) | 737, 1041 |
| GlaI | GCGC | 2 cut(s) | 50, 243 |
| GluI | GCNGC | 7 cut(s) | 47, 105, 108, 117, 153, 744, 1355 |
| GsuI | CTGGAG | 1 cut(s) | 918 |
| HaeII | RGCGCY | 1 cut(s) | 245 |
| HaeIII | GGCC | 2 cut(s) | 78, 92 |
| HapII | CCGG | 1 cut(s) | 1075 |
| HhaI | GCGC | 2 cut(s) | 51, 244 |
| Hin1II | CATG | 4 cut(s) | 479, 1052, 1223, 1377 |
| Hin6I | GCGC | 2 cut(s) | 49, 242 |
| HinP1I | GCGC | 2 cut(s) | 49, 242 |
| HincII | GTYRAC | 1 cut(s) | 859 |
| HindII | GTYRAC | 1 cut(s) | 859 |
| HinfI | GANTC | 1 cut(s) | 955 |
| HpaI | GTTAAC | 1 cut(s) | 859 |
| HpaII | CCGG | 1 cut(s) | 1075 |
| HphI | GGTGA | 3 cut(s) | 22, 584, 1093 |
| Hpy166II | GTNNAC | 5 cut(s) | 33, 374, 694, 859, 1142 |
| Hpy188I | TCNGA | 4 cut(s) | 307, 322, 795, 1091 |
| Hpy188III | TCNNGA | 7 cut(s) | 86, 653, 737, 1109, 1319, 1349, 1374 |
| Hpy8I | GTNNAC | 5 cut(s) | 33, 374, 694, 859, 1142 |
| HpyAV | CCTTC | 4 cut(s) | 354, 398, 697, 869 |
| HpyCH4III | ACNGT | 2 cut(s) | 499, 599 |
| HpyCH4IV | ACGT | 3 cut(s) | 376, 1020, 1208 |
| HpyCH4V | TGCA | 8 cut(s) | 545, 632, 715, 730, 1017, 1142, 1244, 1325 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 113, 116, 149, 200, 749, 1139 |
| HpyF3I | CTNAG | 2 cut(s) | 1129, 1214 |
| HpySE526I | ACGT | 3 cut(s) | 376, 1020, 1208 |
| Hsp92II | CATG | 4 cut(s) | 479, 1052, 1223, 1377 |
| HspAI | GCGC | 2 cut(s) | 49, 242 |
| KspAI | GTTAAC | 1 cut(s) | 859 |
| Kzo9I | GATC | 3 cut(s) | 649, 733, 1125 |
| LguI | GCTCTTC | 2 cut(s) | 94, 210 |
| LmnI | GCTCC | 1 cut(s) | 265 |
| Lsp1109I | GCAGC | 7 cut(s) | 58, 103, 116, 119, 139, 730, 1366 |
| LweI | GCATC | 4 cut(s) | 532, 619, 730, 1312 |
| MaeI | CTAG | 2 cut(s) | 737, 1041 |
| MaeII | ACGT | 3 cut(s) | 376, 1020, 1208 |
| MaeIII | GTNAC | 3 cut(s) | 412, 445, 721 |
| MalI | GATC | 3 cut(s) | 651, 735, 1127 |
| MboI | GATC | 3 cut(s) | 649, 733, 1125 |
| MfeI | CAATTG | 1 cut(s) | 515 |
| MflI | RGATCY | 1 cut(s) | 1125 |
| MhlI | GDGCHC | 2 cut(s) | 974, 1144 |
| MluCI | AATT | 6 cut(s) | 352, 515, 644, 819, 830, 1011 |
| MmeI | TCCRAC | 2 cut(s) | 504, 1050 |
| Mph1103I | ATGCAT | 2 cut(s) | 547, 634 |
| MroXI | GAANNNNTTC | 1 cut(s) | 24 |
| MseI | TTAA | 6 cut(s) | 327, 344, 491, 552, 609, 858 |
| MspI | CCGG | 1 cut(s) | 1075 |
| MspR9I | CCNGG | 3 cut(s) | 225, 263, 897 |
| MunI | CAATTG | 1 cut(s) | 515 |
| Mva1269I | GAATGC | 1 cut(s) | 754 |
| MvaI | CCWGG | 3 cut(s) | 225, 263, 897 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 113, 116, 149, 200, 749, 1139 |
| NdeI | CATATG | 1 cut(s) | 924 |
| NdeII | GATC | 3 cut(s) | 649, 733, 1125 |
| NlaIII | CATG | 4 cut(s) | 479, 1052, 1223, 1377 |
| NlaIV | GGNNCC | 3 cut(s) | 282, 508, 528 |
| NsiI | ATGCAT | 2 cut(s) | 547, 634 |
| NspI | RCATGY | 1 cut(s) | 1223 |
| PaeI | GCATGC | 1 cut(s) | 1223 |
| PagI | TCATGA | 1 cut(s) | 1373 |
| PceI | AGGCCT | 1 cut(s) | 78 |
| PciSI | GCTCTTC | 2 cut(s) | 94, 210 |
| PctI | GAATGC | 1 cut(s) | 754 |
| PdmI | GAANNNNTTC | 1 cut(s) | 24 |
| PfeI | GAWTC | 1 cut(s) | 955 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 299 |
| PfoI | TCCNGGA | 2 cut(s) | 223, 895 |
| PinAI | ACCGGT | 1 cut(s) | 1074 |
| PkrI | GCNGC | 7 cut(s) | 48, 106, 109, 118, 154, 745, 1356 |
| Ppu21I | YACGTR | 1 cut(s) | 377 |
| Psp124BI | GAGCTC | 1 cut(s) | 974 |
| Psp6I | CCWGG | 3 cut(s) | 223, 261, 895 |
| PspGI | CCWGG | 3 cut(s) | 223, 261, 895 |
| PspN4I | GGNNCC | 3 cut(s) | 282, 508, 528 |
| PspPI | GGNCC | 4 cut(s) | 218, 526, 1072, 1106 |
| PsuI | RGATCY | 1 cut(s) | 1125 |
| RsaI | GTAC | 2 cut(s) | 921, 950 |
| RsaNI | GTAC | 2 cut(s) | 920, 949 |
| SacI | GAGCTC | 1 cut(s) | 974 |
| SapI | GCTCTTC | 2 cut(s) | 94, 210 |
| SaqAI | TTAA | 6 cut(s) | 327, 344, 491, 552, 609, 858 |
| SatI | GCNGC | 7 cut(s) | 47, 105, 108, 117, 153, 744, 1355 |
| Sau3AI | GATC | 3 cut(s) | 649, 733, 1125 |
| Sau96I | GGNCC | 4 cut(s) | 218, 526, 1072, 1106 |
| ScrFI | CCNGG | 3 cut(s) | 225, 263, 897 |
| SduI | GDGCHC | 2 cut(s) | 974, 1144 |
| SfaNI | GCATC | 4 cut(s) | 532, 619, 730, 1312 |
| SinI | GGWCC | 4 cut(s) | 218, 526, 1072, 1106 |
| SmlI | CTYRAG | 2 cut(s) | 86, 759 |
| SmoI | CTYRAG | 2 cut(s) | 86, 759 |
| SnaBI | TACGTA | 1 cut(s) | 377 |
| SphI | GCATGC | 1 cut(s) | 1223 |
| Sse9I | AATT | 6 cut(s) | 352, 515, 644, 819, 830, 1011 |
| SseBI | AGGCCT | 1 cut(s) | 78 |
| SsiI | CCGC | 1 cut(s) | 1282 |
| SspI | AATATT | 1 cut(s) | 993 |
| SspMI | CTAG | 2 cut(s) | 737, 1041 |
| SstI | GAGCTC | 1 cut(s) | 974 |
| StuI | AGGCCT | 1 cut(s) | 78 |
| StyD4I | CCNGG | 3 cut(s) | 223, 261, 895 |
| StyI | CCWWGG | 2 cut(s) | 79, 1186 |
| TaaI | ACNGT | 2 cut(s) | 499, 599 |
| TaiI | ACGT | 3 cut(s) | 379, 1023, 1211 |
| TaqI | TCGA | 2 cut(s) | 648, 754 |
| TasI | AATT | 6 cut(s) | 352, 515, 644, 819, 830, 1011 |
| TfiI | GAWTC | 1 cut(s) | 955 |
| Tru1I | TTAA | 6 cut(s) | 327, 344, 491, 552, 609, 858 |
| Tru9I | TTAA | 6 cut(s) | 327, 344, 491, 552, 609, 858 |
| TscAI | CASTG | 1 cut(s) | 604 |
| TseI | GCWGC | 7 cut(s) | 46, 104, 107, 116, 152, 743, 1354 |
| TspDTI | ATGAA | 7 cut(s) | 306, 417, 815, 888, 898, 1277, 1362 |
| TspGWI | ACGGA | 3 cut(s) | 452, 656, 839 |
| TspRI | CASTG | 1 cut(s) | 604 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 299 |
| VneI | GTGCAC | 1 cut(s) | 1140 |
| VpaK11BI | GGWCC | 4 cut(s) | 218, 526, 1072, 1106 |
| XapI | RAATTY | 3 cut(s) | 352, 644, 1011 |
| XbaI | TCTAGA | 1 cut(s) | 736 |
| XceI | RCATGY | 1 cut(s) | 1223 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 482 |
| XmiI | GTMKAC | 1 cut(s) | 373 |
| XmnI | GAANNNNTTC | 1 cut(s) | 24 |
| XspI | CTAG | 2 cut(s) | 737, 1041 |
| Zsp2I | ATGCAT | 2 cut(s) | 547, 634 |