Rh4CG257000

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0000030
Physical Location & Seq
Reverse (-)
50957806 .. 50959305
1500 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG257000.1

Sequence Viewer

Length: 1065 bp
ATGGAAGAGGCATGGAAAAGAGAGAGATGGACAACAGACATGTATAAAAGAGTTCGTGATGCGACCCCAAGCAAAAGTGGAAGTTCATGCAGTTCAGACGAGTCAAGTCCATTGAAAAACCCCAAAAAACGCATGAAGAAATTAGCATCGGCAGTTAATGAGGAACAGACCGGTGACACTGAAATTACCATTAGAGGTGATTGCCAAGAAGATGGAAAGAATGGAAGCTTTCATAACAGTTCTGGTGAAGTTCCCATTAGAATTAGAGTGGCCGGCCGGGCAAAAGAGTTCAAACGGACTGTTGGAAAGCTGTCAAATGAAAAGGTTTTAGCAATCAACGATATGGGATTTGGTAATATTTTCATGTTCTGGTGCAACAAATTGAACCTCCACCTTTGCCAAATGTTGGTCGACAATTTTGATGTAGGCAGCTCGTGCATGAAGATTCATGGGAGGCACTTGATGATCAGCCATGAAGATTTTAAGCGGGTAATGAATGTGAGGGATGGAACTTGTGAAGTAGACCTAGCTGGTTGCTTGGATGATGCAGATATCGTGCAATTGAAGAGCATGATATGTGGAAGTGATAGTAAAATCAGTATTGACCTCTTAAGGAGTTTGGGTTTAGAGACCGAAAGTGCTGATGACATATTTAAAATTTCCTTCTGCTTGTATGCCATTGGAACTCTATTGTGCCCAACCGGAGATGACCATGTTGATCCGAGGTACCTGCTATCGTTGAGGGAGCCAAGTACTATACATTCAAAGAAATGGGATGGTTATGGTGTTGAACATGACAACATGGGAACATGGGAAGGCAACATGGGAAGTTATGGTGTTGAACATGACAAAGAGGAGGTTTGTGAAAAGGGAAAACTCAATATAACCAAGCCATTTTCAAAATGGGATGCATCTGATTTGTGCGACTCACCAACCTTGGTTGATATATTTGGAATGTATGGTGATGGGGGACCTAGTGGAGGAAGCAAGATGGGCTTAGTTGCTGATGATGTAGGAGGTGAGTTGGGAGAAATCTCAGTTTTAAAATCTCCCGAGTCTGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

354

Amino Acids

39.12

Weight (kDa)

5.19

Isoelectric Point (pI)

36.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 738
Acc65I GGTACC 1 cut(s) 726
AccB1I GGYRCC 1 cut(s) 726
AccB7I CCANNNNNTGG 1 cut(s) 406
AccI GTMKAC 2 cut(s) 411, 522
AciI CCGC 1 cut(s) 487
AclWI GGATC 1 cut(s) 713
AcoI YGGCCR 2 cut(s) 270, 274
AcsI RAATTY 1 cut(s) 657
AfaI GTAC 2 cut(s) 728, 754
AfiI CCNNNNNNNGG 2 cut(s) 406, 980
AflII CTTAAG 1 cut(s) 610
AflIII ACRYGT 1 cut(s) 39
AgeI ACCGGT 1 cut(s) 170
AgsI TTSAA 8 cut(s) 115, 292, 385, 565, 765, 791, 842, 900
AluBI AGCT 4 cut(s) 228, 310, 432, 530
AluI AGCT 4 cut(s) 228, 310, 432, 530
Alw26I GTCTC 1 cut(s) 623
AlwI GGATC 1 cut(s) 713
Ama87I CYCGRG 1 cut(s) 1052
AoxI GGCC 2 cut(s) 270, 274
ApeKI GCWGC 1 cut(s) 429
ApoI RAATTY 1 cut(s) 657
AsiGI ACCGGT 1 cut(s) 170
Asp718I GGTACC 1 cut(s) 726
AspS9I GGNCC 1 cut(s) 971
AsuC2I CCSGG 1 cut(s) 278
AsuHPI GGTGA 6 cut(s) 185, 209, 257, 921, 974, 1031
AvaI CYCGRG 1 cut(s) 1052
AvaII GGWCC 1 cut(s) 971
BaeGI GKGCMC 1 cut(s) 698
BanI GGYRCC 1 cut(s) 726
BauI CACGAG 1 cut(s) 433
BbvI GCAGC 1 cut(s) 441
BccI CCATC 6 cut(s) 21, 206, 500, 770, 959, 985
BcgI CGANNNNNNTGC 2 cut(s) 712, 746
BclI TGATCA 1 cut(s) 465
BcnI CCSGG 1 cut(s) 278
BcoDI GTCTC 1 cut(s) 623
BfaI CTAG 2 cut(s) 527, 975
BfrI CTTAAG 1 cut(s) 610
BfuAI ACCTGC 1 cut(s) 738
BglI GCCNNNNNGGC 1 cut(s) 278
BisI GCNGC 1 cut(s) 430
BlsI GCNGC 1 cut(s) 431
BmcAI AGTACT 1 cut(s) 754
Bme1390I CCNGG 1 cut(s) 278
Bme18I GGWCC 1 cut(s) 971
BmeT110I CYCGRG 1 cut(s) 1052
BmgT120I GGNCC 1 cut(s) 971
BmiI GGNNCC 3 cut(s) 728, 747, 972
BmrFI CCNGG 1 cut(s) 278
BmsI GCATC 5 cut(s) 49, 155, 535, 898, 920
BpuMI CCSGG 1 cut(s) 278
BsaI GGTCTC 1 cut(s) 623
BsaJI CCNNGG 2 cut(s) 722, 936
BsaWI WCCGGW 2 cut(s) 170, 701
BsaXI ACNNNNNCTCC 2 cut(s) 607, 637
Bsc4I CCNNNNNNNGG 2 cut(s) 406, 980
Bse118I RCCGGY 2 cut(s) 170, 272
BseDI CCNNGG 2 cut(s) 722, 936
BseGI GGATG 4 cut(s) 511, 547, 781, 913
BseLI CCNNNNNNNGG 2 cut(s) 406, 980
BseMII CTCAG 1 cut(s) 1050
BseRI GAGGAG 1 cut(s) 869
BseSI GKGCMC 1 cut(s) 698
BseX3I CGGCCG 1 cut(s) 274
BseXI GCAGC 1 cut(s) 441
Bsh1285I CGRYCG 1 cut(s) 277
BshFI GGCC 2 cut(s) 272, 276
BshNI GGYRCC 1 cut(s) 726
BshTI ACCGGT 1 cut(s) 170
BsiEI CGRYCG 1 cut(s) 277
BsiHKCI CYCGRG 1 cut(s) 1052
BsiSI CCGG 4 cut(s) 171, 273, 277, 702
BslFI GGGAC 1 cut(s) 984
BslI CCNNNNNNNGG 2 cut(s) 406, 980
BsmAI GTCTC 1 cut(s) 623
BsmFI GGGAC 1 cut(s) 984
BsnI GGCC 2 cut(s) 272, 276
Bso31I GGTCTC 1 cut(s) 623
BsoBI CYCGRG 1 cut(s) 1052
Bsp1286I GDGCHC 1 cut(s) 698
Bsp143I GATC 2 cut(s) 465, 718
BspACI CCGC 1 cut(s) 487
BspANI GGCC 2 cut(s) 272, 276
BspCNI CTCAG 1 cut(s) 1049
BspLI GGNNCC 3 cut(s) 728, 747, 972
BspMI ACCTGC 1 cut(s) 738
BspPI GGATC 1 cut(s) 713
BspQI GCTCTTC 1 cut(s) 560
BspT107I GGYRCC 1 cut(s) 726
BspTI CTTAAG 1 cut(s) 610
BspTNI GGTCTC 1 cut(s) 623
BsrFI RCCGGY 2 cut(s) 170, 272
BssAI RCCGGY 2 cut(s) 170, 272
BssECI CCNNGG 2 cut(s) 722, 936
BssMI GATC 2 cut(s) 465, 718
BssSI CACGAG 1 cut(s) 433
BssT1I CCWWGG 1 cut(s) 936
Bst2BI CACGAG 1 cut(s) 433
Bst4CI ACNGT 2 cut(s) 239, 301
Bst6I CTCTTC 1 cut(s) 560
BstAFI CTTAAG 1 cut(s) 610
BstAPI GCANNNNNTGC 1 cut(s) 435
BstC8I GCNNGC 1 cut(s) 274
BstDEI CTNAG 2 cut(s) 997, 1036
BstENI CCTNNNNNAGG 1 cut(s) 978
BstF5I GGATG 4 cut(s) 511, 547, 781, 913
BstKTI GATC 2 cut(s) 468, 721
BstMAI GTCTC 1 cut(s) 623
BstMBI GATC 2 cut(s) 465, 718
BstMCI CGRYCG 1 cut(s) 277
BstMWI GCNNNNNNNGC 3 cut(s) 278, 435, 993
BstNSI RCATGY 1 cut(s) 43
BstSCI CCNGG 1 cut(s) 276
BstSLI GKGCMC 1 cut(s) 698
BstV1I GCAGC 1 cut(s) 441
BstXI CCANNNNNNTGG 1 cut(s) 212
BstZI CGGCCG 1 cut(s) 274
BsuRI GGCC 2 cut(s) 272, 276
BtsCI GGATG 4 cut(s) 511, 547, 781, 913
BtsIMutI CAGTG 1 cut(s) 177
BveI ACCTGC 1 cut(s) 738
Cac8I GCNNGC 1 cut(s) 274
Cfr10I RCCGGY 2 cut(s) 170, 272
Cfr13I GGNCC 1 cut(s) 971
Csp6I GTAC 2 cut(s) 727, 753
CspAI ACCGGT 1 cut(s) 170
CviQI GTAC 2 cut(s) 727, 753
DdeI CTNAG 2 cut(s) 997, 1036
DpnI GATC 2 cut(s) 467, 720
DpnII GATC 2 cut(s) 465, 718
DraI TTTAAA 2 cut(s) 655, 1044
EaeI YGGCCR 2 cut(s) 270, 274
EagI CGGCCG 1 cut(s) 274
Eam1104I CTCTTC 1 cut(s) 560
EarI CTCTTC 1 cut(s) 560
EclXI CGGCCG 1 cut(s) 274
Eco130I CCWWGG 1 cut(s) 936
Eco31I GGTCTC 1 cut(s) 623
Eco32I GATATC 1 cut(s) 553
Eco47I GGWCC 1 cut(s) 971
Eco52I CGGCCG 1 cut(s) 274
Eco88I CYCGRG 1 cut(s) 1052
EcoNI CCTNNNNNAGG 1 cut(s) 978
EcoO109I RGGNCCY 1 cut(s) 971
EcoRV GATATC 1 cut(s) 553
EcoT14I CCWWGG 1 cut(s) 936
EcoT22I ATGCAT 1 cut(s) 913
ErhI CCWWGG 1 cut(s) 936
FalI AAGNNNNNCTT 2 cut(s) 980, 1012
FaqI GGGAC 1 cut(s) 984
FauI CCCGC 1 cut(s) 480
FbaI TGATCA 1 cut(s) 465
FblI GTMKAC 2 cut(s) 411, 522
Fnu4HI GCNGC 1 cut(s) 430
FokI GGATG 4 cut(s) 518, 554, 788, 920
FseI GGCCGGCC 1 cut(s) 276
Fsp4HI GCNGC 1 cut(s) 430
FspBI CTAG 2 cut(s) 527, 975
GluI GCNGC 1 cut(s) 430
HaeIII GGCC 2 cut(s) 272, 276
HapII CCGG 4 cut(s) 171, 273, 277, 702
HincII GTYRAC 1 cut(s) 412
HindII GTYRAC 1 cut(s) 412
HindIII AAGCTT 1 cut(s) 226
HinfI GANTC 4 cut(s) 101, 445, 926, 1055
HpaII CCGG 4 cut(s) 171, 273, 277, 702
HphI GGTGA 6 cut(s) 185, 209, 257, 921, 974, 1031
Hpy166II GTNNAC 2 cut(s) 412, 523
Hpy188I TCNGA 4 cut(s) 97, 723, 916, 1060
Hpy188III TCNNGA 2 cut(s) 56, 1052
Hpy8I GTNNAC 2 cut(s) 412, 523
HpyAV CCTTC 2 cut(s) 673, 809
HpyCH4III ACNGT 2 cut(s) 239, 301
HpyCH4V TGCA 6 cut(s) 90, 375, 438, 548, 559, 911
HpyF10VI GCNNNNNNNGC 3 cut(s) 278, 435, 993
HpyF3I CTNAG 2 cut(s) 997, 1036
KpnI GGTACC 1 cut(s) 730
KroI GCCGGC 1 cut(s) 272
KroNI GCCGGC 1 cut(s) 274
Ksp22I TGATCA 1 cut(s) 465
Kzo9I GATC 2 cut(s) 465, 718
LguI GCTCTTC 1 cut(s) 560
LmnI GCTCC 1 cut(s) 745
LpnPI CCDG 8 cut(s) 184, 228, 286, 290, 355, 516, 715, 743
Lsp1109I GCAGC 1 cut(s) 441
LweI GCATC 5 cut(s) 49, 155, 535, 898, 920
MaeI CTAG 2 cut(s) 527, 975
MaeIII GTNAC 1 cut(s) 173
MalI GATC 2 cut(s) 467, 720
MboI GATC 2 cut(s) 465, 718
MboII GAAGA 6 cut(s) 17, 148, 221, 454, 488, 577
MfeI CAATTG 1 cut(s) 560
MhlI GDGCHC 1 cut(s) 698
MluCI AATT 7 cut(s) 140, 183, 261, 380, 415, 560, 657
MlyI GAGTC 3 cut(s) 110, 920, 1064
MmeI TCCRAC 1 cut(s) 283
Mph1103I ATGCAT 1 cut(s) 913
MroNI GCCGGC 1 cut(s) 272
MseI TTAA 5 cut(s) 156, 483, 611, 654, 1043
MspCI CTTAAG 1 cut(s) 610
MspI CCGG 4 cut(s) 171, 273, 277, 702
MspR9I CCNGG 1 cut(s) 278
MunI CAATTG 1 cut(s) 560
MwoI GCNNNNNNNGC 3 cut(s) 278, 435, 993
NaeI GCCGGC 1 cut(s) 274
NciI CCSGG 1 cut(s) 278
NdeII GATC 2 cut(s) 465, 718
NgoMIV GCCGGC 1 cut(s) 272
NlaIV GGNNCC 3 cut(s) 728, 747, 972
NmuCI GTSAC 1 cut(s) 173
NsiI ATGCAT 1 cut(s) 913
NspI RCATGY 1 cut(s) 43
PciI ACATGT 1 cut(s) 39
PciSI GCTCTTC 1 cut(s) 560
PdiI GCCGGC 1 cut(s) 274
PfeI GAWTC 1 cut(s) 445
PflMI CCANNNNNTGG 1 cut(s) 406
PinAI ACCGGT 1 cut(s) 170
PkrI GCNGC 1 cut(s) 431
PleI GAGTC 3 cut(s) 109, 920, 1063
PpsI GAGTC 3 cut(s) 109, 920, 1063
PpuMI RGGWCCY 1 cut(s) 971
PscI ACATGT 1 cut(s) 39
Psp5II RGGWCCY 1 cut(s) 971
PspN4I GGNNCC 3 cut(s) 728, 747, 972
PspPI GGNCC 1 cut(s) 971
PspPPI RGGWCCY 1 cut(s) 971
RigI GGCCGGCC 1 cut(s) 276
RsaI GTAC 2 cut(s) 728, 754
RsaNI GTAC 2 cut(s) 727, 753
SalI GTCGAC 1 cut(s) 410
SapI GCTCTTC 1 cut(s) 560
SaqAI TTAA 5 cut(s) 156, 483, 611, 654, 1043
SatI GCNGC 1 cut(s) 430
Sau3AI GATC 2 cut(s) 465, 718
Sau96I GGNCC 1 cut(s) 971
ScaI AGTACT 1 cut(s) 754
SchI GAGTC 3 cut(s) 110, 920, 1064
ScrFI CCNGG 1 cut(s) 278
SduI GDGCHC 1 cut(s) 698
SfaNI GCATC 5 cut(s) 49, 155, 535, 898, 920
SinI GGWCC 1 cut(s) 971
SmlI CTYRAG 1 cut(s) 610
SmoI CTYRAG 1 cut(s) 610
Sse9I AATT 7 cut(s) 140, 183, 261, 380, 415, 560, 657
SsiI CCGC 1 cut(s) 487
SspI AATATT 1 cut(s) 358
SspMI CTAG 2 cut(s) 527, 975
StyD4I CCNGG 1 cut(s) 276
StyI CCWWGG 1 cut(s) 936
TaaI ACNGT 2 cut(s) 239, 301
TaqI TCGA 1 cut(s) 411
TaqII GACCGA 1 cut(s) 647
TasI AATT 7 cut(s) 140, 183, 261, 380, 415, 560, 657
TatI WGTACW 1 cut(s) 752
TfiI GAWTC 1 cut(s) 445
Tru1I TTAA 5 cut(s) 156, 483, 611, 654, 1043
Tru9I TTAA 5 cut(s) 156, 483, 611, 654, 1043
TscAI CASTG 1 cut(s) 184
TseFI GTSAC 1 cut(s) 173
TseI GCWGC 1 cut(s) 429
Tsp45I GTSAC 1 cut(s) 173
TspDTI ATGAA 9 cut(s) 75, 149, 221, 333, 352, 437, 455, 489, 509
TspGWI ACGGA 1 cut(s) 310
TspRI CASTG 1 cut(s) 184
Van91I CCANNNNNTGG 1 cut(s) 406
Vha464I CTTAAG 1 cut(s) 610
VpaK11BI GGWCC 1 cut(s) 971
XagI CCTNNNNNAGG 1 cut(s) 978
XapI RAATTY 1 cut(s) 657
XceI RCATGY 1 cut(s) 43
XcmI CCANNNNNNNNNTGG 1 cut(s) 900
XmiI GTMKAC 2 cut(s) 411, 522
XspI CTAG 2 cut(s) 527, 975
ZrmI AGTACT 1 cut(s) 754
Zsp2I ATGCAT 1 cut(s) 913
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.