No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 92 |
| Acc36I | ACCTGC | 1 cut(s) | 149 |
| Acc65I | GGTACC | 1 cut(s) | 72 |
| AccB1I | GGYRCC | 3 cut(s) | 72, 199, 623 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 884 |
| AccII | CGCG | 3 cut(s) | 205, 355, 872 |
| AclWI | GGATC | 5 cut(s) | 136, 226, 497, 658, 689 |
| AcsI | RAATTY | 1 cut(s) | 373 |
| AcuI | CTGAAG | 1 cut(s) | 172 |
| AcyI | GRCGYC | 1 cut(s) | 995 |
| AfaI | GTAC | 2 cut(s) | 74, 1325 |
| AgeI | ACCGGT | 1 cut(s) | 170 |
| AjiI | CACGTC | 2 cut(s) | 587, 1376 |
| AjnI | CCWGG | 1 cut(s) | 1058 |
| AluBI | AGCT | 2 cut(s) | 186, 1217 |
| AluI | AGCT | 2 cut(s) | 186, 1217 |
| Alw21I | GWGCWC | 3 cut(s) | 1097, 1309, 1381 |
| Alw26I | GTCTC | 4 cut(s) | 23, 100, 533, 1009 |
| Alw44I | GTGCAC | 2 cut(s) | 1093, 1305 |
| AlwI | GGATC | 5 cut(s) | 136, 226, 497, 658, 689 |
| Ama87I | CYCGRG | 2 cut(s) | 109, 791 |
| AoxI | GGCC | 9 cut(s) | 114, 404, 437, 726, 819, 979, 1038, 1051, 1056 |
| ApaI | GGGCCC | 3 cut(s) | 118, 1042, 1055 |
| ApaLI | GTGCAC | 2 cut(s) | 1093, 1305 |
| ApeKI | GCWGC | 2 cut(s) | 911, 1150 |
| ApoI | RAATTY | 1 cut(s) | 373 |
| AseI | ATTAAT | 1 cut(s) | 1445 |
| AsiGI | ACCGGT | 1 cut(s) | 170 |
| Asp718I | GGTACC | 1 cut(s) | 72 |
| AspLEI | GCGC | 2 cut(s) | 872, 874 |
| AsuC2I | CCSGG | 1 cut(s) | 1055 |
| AsuHPI | GGTGA | 1 cut(s) | 342 |
| AvaI | CYCGRG | 2 cut(s) | 109, 791 |
| BaeGI | GKGCMC | 5 cut(s) | 118, 1042, 1055, 1097, 1309 |
| BanI | GGYRCC | 3 cut(s) | 72, 199, 623 |
| BanII | GRGCYC | 4 cut(s) | 118, 792, 1042, 1055 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 317, 349 |
| BbsI | GAAGAC | 2 cut(s) | 675, 1347 |
| Bbv12I | GWGCWC | 3 cut(s) | 1097, 1309, 1381 |
| BbvI | GCAGC | 2 cut(s) | 898, 1162 |
| BccI | CCATC | 7 cut(s) | 125, 323, 423, 529, 564, 740, 901 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 147, 181 |
| BciT130I | CCWGG | 1 cut(s) | 1060 |
| BclI | TGATCA | 1 cut(s) | 799 |
| BcnI | CCSGG | 1 cut(s) | 1055 |
| BcoDI | GTCTC | 4 cut(s) | 23, 100, 533, 1009 |
| BfaI | CTAG | 3 cut(s) | 1118, 1158, 1382 |
| BfuAI | ACCTGC | 1 cut(s) | 149 |
| BglII | AGATCT | 1 cut(s) | 833 |
| BisI | GCNGC | 5 cut(s) | 400, 868, 912, 932, 1151 |
| BlsI | GCNGC | 5 cut(s) | 401, 869, 913, 933, 1152 |
| Bme1390I | CCNGG | 2 cut(s) | 1055, 1060 |
| BmeT110I | CYCGRG | 2 cut(s) | 109, 791 |
| BmgBI | CACGTC | 2 cut(s) | 587, 1376 |
| BmiI | GGNNCC | 9 cut(s) | 74, 115, 116, 117, 201, 625, 727, 1040, 1053 |
| BmrFI | CCNGG | 2 cut(s) | 1055, 1060 |
| BpiI | GAAGAC | 2 cut(s) | 675, 1347 |
| Bpu10I | CCTNAGC | 1 cut(s) | 600 |
| BpuMI | CCSGG | 1 cut(s) | 1055 |
| BsaHI | GRCGYC | 1 cut(s) | 995 |
| BsaI | GGTCTC | 1 cut(s) | 1009 |
| BsaJI | CCNNGG | 5 cut(s) | 195, 627, 878, 1016, 1059 |
| BsaWI | WCCGGW | 1 cut(s) | 170 |
| Bse118I | RCCGGY | 1 cut(s) | 170 |
| Bse3DI | GCAATG | 1 cut(s) | 1270 |
| BseBI | CCWGG | 1 cut(s) | 1060 |
| BseDI | CCNNGG | 5 cut(s) | 195, 627, 878, 1016, 1059 |
| BseGI | GGATG | 2 cut(s) | 334, 751 |
| BseMI | GCAATG | 1 cut(s) | 1270 |
| BseMII | CTCAG | 5 cut(s) | 162, 357, 614, 1189, 1209 |
| BsePI | GCGCGC | 1 cut(s) | 870 |
| BseRI | GAGGAG | 1 cut(s) | 538 |
| BseSI | GKGCMC | 5 cut(s) | 118, 1042, 1055, 1097, 1309 |
| BseXI | GCAGC | 2 cut(s) | 898, 1162 |
| BseYI | CCCAGC | 1 cut(s) | 760 |
| BsgI | GTGCAG | 1 cut(s) | 960 |
| Bsh1236I | CGCG | 3 cut(s) | 205, 355, 872 |
| Bsh1285I | CGRYCG | 1 cut(s) | 171 |
| BshFI | GGCC | 9 cut(s) | 116, 406, 439, 728, 821, 981, 1040, 1053, 1058 |
| BshNI | GGYRCC | 3 cut(s) | 72, 199, 623 |
| BshTI | ACCGGT | 1 cut(s) | 170 |
| BsiEI | CGRYCG | 1 cut(s) | 171 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1097, 1309, 1381 |
| BsiHKCI | CYCGRG | 2 cut(s) | 109, 791 |
| BsiSI | CCGG | 4 cut(s) | 80, 171, 396, 1055 |
| BslFI | GGGAC | 2 cut(s) | 548, 1403 |
| BsmAI | GTCTC | 4 cut(s) | 23, 100, 533, 1009 |
| BsmBI | CGTCTC | 1 cut(s) | 100 |
| BsmFI | GGGAC | 2 cut(s) | 548, 1403 |
| BsnI | GGCC | 9 cut(s) | 116, 406, 439, 728, 821, 981, 1040, 1053, 1058 |
| Bso31I | GGTCTC | 1 cut(s) | 1009 |
| BsoBI | CYCGRG | 2 cut(s) | 109, 791 |
| Bsp120I | GGGCCC | 3 cut(s) | 114, 1038, 1051 |
| Bsp1286I | GDGCHC | 7 cut(s) | 118, 792, 1042, 1055, 1097, 1309, 1381 |
| Bsp19I | CCATGG | 2 cut(s) | 627, 878 |
| BspANI | GGCC | 9 cut(s) | 116, 406, 439, 728, 821, 981, 1040, 1053, 1058 |
| BspCNI | CTCAG | 5 cut(s) | 161, 358, 613, 1188, 1210 |
| BspFNI | CGCG | 3 cut(s) | 205, 355, 872 |
| BspLI | GGNNCC | 9 cut(s) | 74, 115, 116, 117, 201, 625, 727, 1040, 1053 |
| BspMI | ACCTGC | 1 cut(s) | 149 |
| BspPI | GGATC | 5 cut(s) | 136, 226, 497, 658, 689 |
| BspT107I | GGYRCC | 3 cut(s) | 72, 199, 623 |
| BspTNI | GGTCTC | 1 cut(s) | 1009 |
| BsrDI | GCAATG | 1 cut(s) | 1270 |
| BsrFI | RCCGGY | 1 cut(s) | 170 |
| BssAI | RCCGGY | 1 cut(s) | 170 |
| BssECI | CCNNGG | 5 cut(s) | 195, 627, 878, 1016, 1059 |
| BssHII | GCGCGC | 1 cut(s) | 870 |
| BssNI | GRCGYC | 1 cut(s) | 995 |
| BssT1I | CCWWGG | 4 cut(s) | 195, 627, 878, 1016 |
| Bst2UI | CCWGG | 1 cut(s) | 1060 |
| Bst4CI | ACNGT | 1 cut(s) | 72 |
| BstACI | GRCGYC | 1 cut(s) | 995 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1313 |
| BstC8I | GCNNGC | 6 cut(s) | 404, 618, 752, 872, 979, 993 |
| BstDEI | CTNAG | 7 cut(s) | 148, 213, 366, 600, 1100, 1175, 1218 |
| BstDSI | CCRYGG | 2 cut(s) | 627, 878 |
| BstF5I | GGATG | 2 cut(s) | 334, 751 |
| BstFNI | CGCG | 3 cut(s) | 205, 355, 872 |
| BstHHI | GCGC | 2 cut(s) | 872, 874 |
| BstMAI | GTCTC | 4 cut(s) | 23, 100, 533, 1009 |
| BstMCI | CGRYCG | 1 cut(s) | 171 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 40, 643, 867, 928, 1112, 1313 |
| BstNI | CCWGG | 1 cut(s) | 1060 |
| BstNSI | RCATGY | 1 cut(s) | 1085 |
| BstSCI | CCNGG | 2 cut(s) | 1053, 1058 |
| BstSLI | GKGCMC | 5 cut(s) | 118, 1042, 1055, 1097, 1309 |
| BstUI | CGCG | 3 cut(s) | 205, 355, 872 |
| BstV1I | GCAGC | 2 cut(s) | 898, 1162 |
| BstV2I | GAAGAC | 2 cut(s) | 675, 1347 |
| BstX2I | RGATCY | 3 cut(s) | 231, 650, 833 |
| BstYI | RGATCY | 3 cut(s) | 231, 650, 833 |
| BsuRI | GGCC | 9 cut(s) | 116, 406, 439, 728, 821, 981, 1040, 1053, 1058 |
| BtgI | CCRYGG | 2 cut(s) | 627, 878 |
| BtrI | CACGTC | 2 cut(s) | 587, 1376 |
| BtsCI | GGATG | 2 cut(s) | 334, 751 |
| BtsIMutI | CAGTG | 2 cut(s) | 36, 1183 |
| BveI | ACCTGC | 1 cut(s) | 149 |
| Cac8I | GCNNGC | 6 cut(s) | 404, 618, 752, 872, 979, 993 |
| CfoI | GCGC | 2 cut(s) | 872, 874 |
| Cfr10I | RCCGGY | 1 cut(s) | 170 |
| CseI | GACGC | 1 cut(s) | 984 |
| Csp6I | GTAC | 2 cut(s) | 73, 1324 |
| CspAI | ACCGGT | 1 cut(s) | 170 |
| CviAII | CATG | 7 cut(s) | 48, 628, 735, 862, 879, 901, 1082 |
| CviQI | GTAC | 2 cut(s) | 73, 1324 |
| DdeI | CTNAG | 7 cut(s) | 148, 213, 366, 600, 1100, 1175, 1218 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 92 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 92 |
| Eco130I | CCWWGG | 4 cut(s) | 195, 627, 878, 1016 |
| Eco24I | GRGCYC | 4 cut(s) | 118, 792, 1042, 1055 |
| Eco31I | GGTCTC | 1 cut(s) | 1009 |
| Eco57I | CTGAAG | 1 cut(s) | 172 |
| Eco88I | CYCGRG | 2 cut(s) | 109, 791 |
| EcoO109I | RGGNCCY | 4 cut(s) | 114, 115, 726, 1039 |
| EcoRII | CCWGG | 1 cut(s) | 1058 |
| EcoT14I | CCWWGG | 4 cut(s) | 195, 627, 878, 1016 |
| EcoT38I | GRGCYC | 4 cut(s) | 118, 792, 1042, 1055 |
| ErhI | CCWWGG | 4 cut(s) | 195, 627, 878, 1016 |
| Esp3I | CGTCTC | 1 cut(s) | 100 |
| FaeI | CATG | 7 cut(s) | 51, 631, 738, 865, 882, 904, 1085 |
| FaqI | GGGAC | 2 cut(s) | 548, 1403 |
| FatI | CATG | 7 cut(s) | 47, 627, 734, 861, 878, 900, 1081 |
| FauI | CCCGC | 4 cut(s) | 395, 609, 743, 970 |
| FbaI | TGATCA | 1 cut(s) | 799 |
| Fnu4HI | GCNGC | 5 cut(s) | 400, 868, 912, 932, 1151 |
| FokI | GGATG | 2 cut(s) | 341, 758 |
| FriOI | GRGCYC | 4 cut(s) | 118, 792, 1042, 1055 |
| Fsp4HI | GCNGC | 5 cut(s) | 400, 868, 912, 932, 1151 |
| FspBI | CTAG | 3 cut(s) | 1118, 1158, 1382 |
| GlaI | GCGC | 2 cut(s) | 871, 873 |
| GluI | GCNGC | 5 cut(s) | 400, 868, 912, 932, 1151 |
| GsaI | CCCAGC | 1 cut(s) | 764 |
| HaeIII | GGCC | 9 cut(s) | 116, 406, 439, 728, 821, 981, 1040, 1053, 1058 |
| HapII | CCGG | 4 cut(s) | 80, 171, 396, 1055 |
| HgaI | GACGC | 1 cut(s) | 984 |
| HhaI | GCGC | 2 cut(s) | 872, 874 |
| Hin1I | GRCGYC | 1 cut(s) | 995 |
| Hin1II | CATG | 7 cut(s) | 51, 631, 738, 865, 882, 904, 1085 |
| Hin6I | GCGC | 2 cut(s) | 870, 872 |
| HinP1I | GCGC | 2 cut(s) | 870, 872 |
| HinfI | GANTC | 2 cut(s) | 347, 1352 |
| HpaII | CCGG | 4 cut(s) | 80, 171, 396, 1055 |
| HphI | GGTGA | 1 cut(s) | 342 |
| Hpy166II | GTNNAC | 2 cut(s) | 1095, 1307 |
| Hpy188III | TCNNGA | 4 cut(s) | 452, 687, 1371, 1382 |
| Hpy8I | GTNNAC | 2 cut(s) | 1095, 1307 |
| Hpy99I | CGWCG | 7 cut(s) | 58, 423, 588, 958, 1000, 1131, 1187 |
| HpyAV | CCTTC | 5 cut(s) | 86, 253, 319, 417, 739 |
| HpyCH4III | ACNGT | 1 cut(s) | 72 |
| HpyCH4IV | ACGT | 2 cut(s) | 586, 1375 |
| HpyCH4V | TGCA | 3 cut(s) | 941, 1095, 1307 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 40, 643, 867, 928, 1112, 1313 |
| HpyF3I | CTNAG | 7 cut(s) | 148, 213, 366, 600, 1100, 1175, 1218 |
| HpySE526I | ACGT | 2 cut(s) | 586, 1375 |
| Hsp92I | GRCGYC | 1 cut(s) | 995 |
| Hsp92II | CATG | 7 cut(s) | 51, 631, 738, 865, 882, 904, 1085 |
| HspAI | GCGC | 2 cut(s) | 870, 872 |
| KpnI | GGTACC | 1 cut(s) | 76 |
| Ksp22I | TGATCA | 1 cut(s) | 799 |
| LmnI | GCTCC | 3 cut(s) | 183, 1018, 1242 |
| Lsp1109I | GCAGC | 2 cut(s) | 898, 1162 |
| MaeI | CTAG | 3 cut(s) | 1118, 1158, 1382 |
| MaeII | ACGT | 2 cut(s) | 586, 1375 |
| MaeIII | GTNAC | 2 cut(s) | 332, 587 |
| MflI | RGATCY | 3 cut(s) | 231, 650, 833 |
| MhlI | GDGCHC | 7 cut(s) | 118, 792, 1042, 1055, 1097, 1309, 1381 |
| MluCI | AATT | 4 cut(s) | 120, 299, 373, 1318 |
| MlyI | GAGTC | 2 cut(s) | 341, 1361 |
| MmeI | TCCRAC | 2 cut(s) | 401, 1165 |
| MseI | TTAA | 3 cut(s) | 302, 471, 1445 |
| MslI | CAYNNNNRTG | 3 cut(s) | 632, 905, 1086 |
| MspI | CCGG | 4 cut(s) | 80, 171, 396, 1055 |
| MspR9I | CCNGG | 2 cut(s) | 1055, 1060 |
| MvaI | CCWGG | 1 cut(s) | 1060 |
| MvnI | CGCG | 3 cut(s) | 205, 355, 872 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 40, 643, 867, 928, 1112, 1313 |
| NciI | CCSGG | 1 cut(s) | 1055 |
| NcoI | CCATGG | 2 cut(s) | 627, 878 |
| NlaIII | CATG | 7 cut(s) | 51, 631, 738, 865, 882, 904, 1085 |
| NlaIV | GGNNCC | 9 cut(s) | 74, 115, 116, 117, 201, 625, 727, 1040, 1053 |
| NmuCI | GTSAC | 1 cut(s) | 587 |
| NspI | RCATGY | 1 cut(s) | 1085 |
| PauI | GCGCGC | 1 cut(s) | 870 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 884 |
| PinAI | ACCGGT | 1 cut(s) | 170 |
| PkrI | GCNGC | 5 cut(s) | 401, 869, 913, 933, 1152 |
| PleI | GAGTC | 2 cut(s) | 341, 1360 |
| PpsI | GAGTC | 2 cut(s) | 341, 1360 |
| PshBI | ATTAAT | 1 cut(s) | 1445 |
| Psp6I | CCWGG | 1 cut(s) | 1058 |
| PspFI | CCCAGC | 1 cut(s) | 760 |
| PspGI | CCWGG | 1 cut(s) | 1058 |
| PspN4I | GGNNCC | 9 cut(s) | 74, 115, 116, 117, 201, 625, 727, 1040, 1053 |
| PspOMI | GGGCCC | 3 cut(s) | 114, 1038, 1051 |
| PsuI | RGATCY | 3 cut(s) | 231, 650, 833 |
| PteI | GCGCGC | 1 cut(s) | 870 |
| RsaI | GTAC | 2 cut(s) | 74, 1325 |
| RsaNI | GTAC | 2 cut(s) | 73, 1324 |
| RseI | CAYNNNNRTG | 3 cut(s) | 632, 905, 1086 |
| SaqAI | TTAA | 3 cut(s) | 302, 471, 1445 |
| SatI | GCNGC | 5 cut(s) | 400, 868, 912, 932, 1151 |
| SchI | GAGTC | 2 cut(s) | 341, 1361 |
| ScrFI | CCNGG | 2 cut(s) | 1055, 1060 |
| SduI | GDGCHC | 7 cut(s) | 118, 792, 1042, 1055, 1097, 1309, 1381 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 632, 905, 1086 |
| SmlI | CTYRAG | 1 cut(s) | 13 |
| SmoI | CTYRAG | 1 cut(s) | 13 |
| Sse9I | AATT | 4 cut(s) | 120, 299, 373, 1318 |
| SspMI | CTAG | 3 cut(s) | 1118, 1158, 1382 |
| StyD4I | CCNGG | 2 cut(s) | 1053, 1058 |
| StyI | CCWWGG | 4 cut(s) | 195, 627, 878, 1016 |
| TaaI | ACNGT | 1 cut(s) | 72 |
| TaiI | ACGT | 2 cut(s) | 589, 1378 |
| TaqI | TCGA | 5 cut(s) | 53, 167, 568, 688, 1249 |
| TasI | AATT | 4 cut(s) | 120, 299, 373, 1318 |
| TauI | GCSGC | 3 cut(s) | 402, 870, 934 |
| Tru1I | TTAA | 3 cut(s) | 302, 471, 1445 |
| Tru9I | TTAA | 3 cut(s) | 302, 471, 1445 |
| TscAI | CASTG | 2 cut(s) | 36, 1183 |
| TseFI | GTSAC | 1 cut(s) | 587 |
| TseI | GCWGC | 2 cut(s) | 911, 1150 |
| Tsp45I | GTSAC | 1 cut(s) | 587 |
| TspDTI | ATGAA | 4 cut(s) | 290, 312, 1184, 1431 |
| TspGWI | ACGGA | 3 cut(s) | 687, 1229, 1251 |
| TspRI | CASTG | 2 cut(s) | 36, 1183 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 884 |
| VneI | GTGCAC | 2 cut(s) | 1093, 1305 |
| VspI | ATTAAT | 1 cut(s) | 1445 |
| XapI | RAATTY | 1 cut(s) | 373 |
| XbaI | TCTAGA | 1 cut(s) | 1381 |
| XceI | RCATGY | 1 cut(s) | 1085 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 634 |
| XspI | CTAG | 3 cut(s) | 1118, 1158, 1382 |