Rorug01G0217200

Basic blue protein-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000267
Physical Location & Seq
Reverse (-)
31047909 .. 31052949
5041 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0217200.1

Sequence Viewer

Length: 1272 bp
ATGTTTCGCCATGCTTCGAGGAACAGTGATAACACCAAGTATTATGAGGTCCTTGGTGTCCCCAAAACTGCGAGTCAAGATGAGCTCAAGAAGGCATATAAGAAAGCTGCTATCAAGAATCATCCTGACAAAGGTGGAGATCCTGAAAAGTTCAAGGAGTTAGGTCAAGCTTATGAAGTTCTTAATGATCCAGAAAAGAGAGAAGTCTATGACCAATATGGTGAAGATGGTCTTAAAGACGGACCAGGACGTGGTGGTCCCTCACATAATCCATTTGATATATTTGAAACGTTTTTGAATCCACGTTATCGTTCACATGTAAGAAGGCAGAAACAAGGTGAAGATGTGGTCCATACCTTAAAGGTTTCTTTGGAGGACTTGTATAATGGCACAACAAAGAAACTCTCTCTCTCCAGGAATATTTTGTGTCCCAAATGTAAAGGGAAAGGCTCAAAGAGCGGAGCAACAGGGAGATGTTACGGATGCCGTGGTACTGGAATGAAGGTTACAACACGGTCAATTGGATTGGGCATGTTTCAACAGATGCAACATCTCTGCCCTGACTGCCGCGGCTCTGGTGAGGTAATCAGTGATAGAGATAAATGCCCACCGTGCAAAGGAAACAAGATTAGTCACGAAAAGAAGGTGCTGGATGTGCACATAGAGAAGGGAATGGAGCACGGACAGAAAATTGTCTTTGAGGGACAGGCTGATGAAGCTCCTGATACAATTACCGGGGATATTGTTATCATAGTGCAACTCAAGGAGCACACCAAGTTCAAGCGGAAGCTTGATGATCTTTACATAGAACACACTCTCAGTTTAACTGAGGCGCTGTGTGGGTTTCAGTTTGTGTTGACTCATCTTGATGGCAGGCCGCTTCTGGTCAAATCAAATCCTGGAGAAGTCATGAAGCCTGGTCAATCCAAAGCAATCAATGATGAGGGCATGCCGCATCACAAAAGGCCATTCATAAAGGGCATTCTTTTCATCCATTTCAACGTAGAATTTCCAGATTCTGGGATTCTTTCCCCTGATCAATGCCGAAATATAGCGACAATACTAACACCCAAGCCAAGCAAGAAGCATTTGACTGACATGGAGCTTGATGAGTGTGAGGAAACCACTATGCATGATGTCAATATTGAGGATGAGATGAGGCGCAAGTCAAAACAACAGTACCGGGAGGCATATGATGATGATGATGATGATGATGATGATGAAGAAGATGATGATGACCCCATGCCACGGGTGCAGTGTGCCCAGCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cu_bind_like

Protein Analysis

423

Amino Acids

47.88

Weight (kDa)

6.04

Isoelectric Point (pI)

37.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 13 - 71 1.2e-22 DnaJ domain
DnaJ_C PF01556 117 - 338 2.1e-36 DnaJ C terminal domain
DnaJ_CXXCXGXG PF00684 143 - 209 5.5e-15 DnaJ central domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000267)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19660 FvH4_1g30321 FvH4_4g07610 FvH4_5g00140 FvH4_6g23340 FvH4_6g29890
rosa_chinensis RchiOBHm_Chr1g0319561 RchiOBHm_Chr1g0320181 RchiOBHm_Chr1g0330531 RchiOBHm_Chr1g0339901 RchiOBHm_Chr1g0341281 RchiOBHm_Chr1g0346381 RchiOBHm_Chr1g0351211 RchiOBHm_Chr1g0358041 RchiOBHm_Chr1g0367541 RchiOBHm_Chr2g0119361 RchiOBHm_Chr2g0120321 RchiOBHm_Chr2g0140171 RchiOBHm_Chr2g0150711 RchiOBHm_Chr2g0151251 RchiOBHm_Chr2g0160901 RchiOBHm_Chr3g0447381 RchiOBHm_Chr3g0459951 RchiOBHm_Chr3g0465101 RchiOBHm_Chr4g0392281 RchiOBHm_Chr4g0405571 RchiOBHm_Chr4g0412841 RchiOBHm_Chr4g0413331 RchiOBHm_Chr4g0422711 RchiOBHm_Chr4g0422751 RchiOBHm_Chr4g0423141 RchiOBHm_Chr4g0423271 RchiOBHm_Chr4g0424711 RchiOBHm_Chr4g0427731 RchiOBHm_Chr4g0442201 RchiOBHm_Chr5g0026201 RchiOBHm_Chr5g0050261 RchiOBHm_Chr6g0277431 RchiOBHm_Chr6g0279711 RchiOBHm_Chr6g0280101 RchiOBHm_Chr6g0280951 RchiOBHm_Chr6g0295101 RchiOBHm_Chr6g0312921 RchiOBHm_Chr7g0201181 RchiOBHm_Chr7g0204591 RchiOBHm_Chr7g0204721 RchiOBHm_Chr7g0204801 RchiOBHm_Chr7g0208411 RchiOBHm_Chr7g0213041 RchiOBHm_Chr7g0215471
rosa_laevigata RLG00000004867 RLG00000018361 RLG00000036656
rosa_multiflora Rmu_sc0000376.1_g000034 Rmu_sc0001576.1_g000002 Rmu_sc0001971.1_g000008 Rmu_sc0002105.1_g000002 Rmu_sc0002310.1_g000018 Rmu_sc0005120.1_g000007 Rmu_sc0005665.1_g000017 Rmu_sc0005715.1_g000010 Rmu_sc0009785.1_g000031 Rmu_sc0010202.1_g000013 Rmu_sc0040921.1_g000004
rosa_roxburghii Rroxscaffold_1G00003120 Rroxscaffold_1G00026660 Rroxscaffold_2G00098060 Rroxscaffold_2G00111130 Rroxscaffold_4G00279230 Rroxscaffold_4G00295650 Rroxscaffold_5G00361140 Rroxscaffold_5G00374320 Rroxscaffold_6G00406950
rosa_rugosa Rorug01G0102500 Rorug01G0165700 Rorug01G0165700 Rorug01G0195800 Rorug01G0195800 Rorug01G0217200 Rorug01G0335400 Rorug02G0029300 Rorug02G0036800 Rorug02G0073300 Rorug02G0279100 Rorug02G0326300 Rorug02G0338400 Rorug02G0371300.1 Rorug02G0421700 Rorug02G0458000 Rorug03G0105100 Rorug03G0105700 Rorug03G0220900 Rorug03G0272600 Rorug03G0322700 Rorug03G0336800 Rorug03G0356900 Rorug03G0364200.1 Rorug04G0028300 Rorug04G0032600 Rorug04G0034400 Rorug04G0203900 Rorug05G0192000 Rorug05G0192000 Rorug05G0313700 Rorug05G0391500 Rorug05G0403500.1 Rorug06G0032700 Rorug06G0174700 Rorug06G0409900 Rorug06G0458800 Rorug07G0114100 Rorug07G0137600 Rorug07G0163900 Rorug07G0244900 Rorug07G0274700 Rorug07G0310400
rosa_samantha Rh1AG070100 Rh1AG070300 Rh1AG070600 Rh1AG070900 Rh1BG181700 Rh3DG183400 Rh4CG044400 Rh4CG163300 Rh5BG000300 Rh6AG036500 Rh7AG328500 Rh7BG204000 Rh7CG345900
rosa_wichuraiana Rw2G022850 Rw6G002520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 255
AccB7I CCANNNNNTGG 2 cut(s) 251, 1019
AccBSI CCGCTC 1 cut(s) 459
AccII CGCG 1 cut(s) 570
AciI CCGC 6 cut(s) 459, 568, 570, 784, 878, 953
AclI AACGTT 1 cut(s) 290
AclWI GGATC 2 cut(s) 134, 182
AcsI RAATTY 1 cut(s) 1007
AfaI GTAC 2 cut(s) 493, 1181
AfiI CCNNNNNNNGG 5 cut(s) 131, 251, 617, 1019, 1248
AflIII ACRYGT 1 cut(s) 316
AgsI TTSAA 6 cut(s) 154, 287, 298, 539, 781, 1000
AjiI CACGTC 1 cut(s) 251
AjnI CCWGG 4 cut(s) 244, 413, 898, 916
AluBI AGCT 6 cut(s) 85, 107, 170, 719, 790, 1105
AluI AGCT 6 cut(s) 85, 107, 170, 719, 790, 1105
Alw21I GWGCWC 4 cut(s) 87, 660, 681, 771
Alw44I GTGCAC 1 cut(s) 656
AlwI GGATC 2 cut(s) 134, 182
AlwNI CAGNNNCTG 1 cut(s) 1019
AoxI GGCC 2 cut(s) 875, 965
ApaLI GTGCAC 1 cut(s) 656
ApeKI GCWGC 1 cut(s) 107
ApoI RAATTY 1 cut(s) 1007
AspLEI GCGC 2 cut(s) 835, 1164
AspS9I GGNCC 4 cut(s) 49, 242, 257, 349
AsuC2I CCSGG 2 cut(s) 736, 1184
AsuHPI GGTGA 3 cut(s) 233, 350, 590
AvaII GGWCC 4 cut(s) 49, 242, 257, 349
BaeGI GKGCMC 2 cut(s) 660, 1264
BaeI ACNNNNGTAYC 2 cut(s) 1163, 1196
BanII GRGCYC 1 cut(s) 87
Bbv12I GWGCWC 4 cut(s) 87, 660, 681, 771
BbvI GCAGC 1 cut(s) 94
BccI CCATC 2 cut(s) 221, 863
BceAI ACGGC 1 cut(s) 471
BciT130I CCWGG 4 cut(s) 246, 415, 900, 918
BclI TGATCA 1 cut(s) 1036
BcnI CCSGG 2 cut(s) 736, 1184
BfoI RGCGCY 1 cut(s) 836
BisI GCNGC 5 cut(s) 108, 568, 571, 878, 953
BlsI GCNGC 5 cut(s) 109, 569, 572, 879, 954
Bme1390I CCNGG 6 cut(s) 246, 415, 736, 900, 918, 1184
Bme18I GGWCC 4 cut(s) 49, 242, 257, 349
BmgBI CACGTC 1 cut(s) 251
BmgT120I GGNCC 4 cut(s) 49, 242, 257, 349
BmiI GGNNCC 1 cut(s) 259
BmrFI CCNGG 6 cut(s) 246, 415, 736, 900, 918, 1184
BmsI GCATC 3 cut(s) 473, 534, 964
BpmI CTGGAG 2 cut(s) 397, 921
BpuEI CTTGAG 2 cut(s) 71, 746
BpuMI CCSGG 2 cut(s) 736, 1184
BsaJI CCNNGG 5 cut(s) 52, 487, 568, 735, 1247
BsaXI ACNNNNNCTCC 2 cut(s) 365, 395
Bsc4I CCNNNNNNNGG 5 cut(s) 131, 251, 617, 1019, 1248
Bse1I ACTGG 1 cut(s) 499
BseBI CCWGG 4 cut(s) 246, 415, 900, 918
BseDI CCNNGG 5 cut(s) 52, 487, 568, 735, 1247
BseGI GGATG 5 cut(s) 121, 488, 658, 990, 1156
BseLI CCNNNNNNNGG 5 cut(s) 131, 251, 617, 1019, 1248
BseMII CTCAG 2 cut(s) 819, 832
BseNI ACTGG 1 cut(s) 499
BseSI GKGCMC 2 cut(s) 660, 1264
BseXI GCAGC 1 cut(s) 94
BseYI CCCAGC 1 cut(s) 1263
Bsh1236I CGCG 1 cut(s) 570
BshFI GGCC 2 cut(s) 877, 967
BsiHKAI GWGCWC 4 cut(s) 87, 660, 681, 771
BsiSI CCGG 2 cut(s) 735, 1183
BslFI GGGAC 4 cut(s) 44, 243, 414, 717
BslI CCNNNNNNNGG 5 cut(s) 131, 251, 617, 1019, 1248
BsmFI GGGAC 4 cut(s) 44, 243, 414, 717
BsmI GAATGC 1 cut(s) 981
BsnI GGCC 2 cut(s) 877, 967
Bsp1286I GDGCHC 5 cut(s) 87, 660, 681, 771, 1264
Bsp143I GATC 4 cut(s) 139, 187, 796, 1036
BspACI CCGC 6 cut(s) 459, 568, 570, 784, 878, 953
BspANI GGCC 2 cut(s) 877, 967
BspCNI CTCAG 2 cut(s) 820, 831
BspFNI CGCG 1 cut(s) 570
BspHI TCATGA 1 cut(s) 909
BspLI GGNNCC 1 cut(s) 259
BspPI GGATC 2 cut(s) 134, 182
BsrBI CCGCTC 1 cut(s) 459
BsrI ACTGG 1 cut(s) 499
BssECI CCNNGG 5 cut(s) 52, 487, 568, 735, 1247
BssMI GATC 4 cut(s) 139, 187, 796, 1036
BssT1I CCWWGG 1 cut(s) 52
Bst2UI CCWGG 4 cut(s) 246, 415, 900, 918
Bst4CI ACNGT 4 cut(s) 26, 516, 612, 1179
BstC8I GCNNGC 2 cut(s) 875, 950
BstDEI CTNAG 2 cut(s) 818, 828
BstDSI CCRYGG 3 cut(s) 487, 568, 1247
BstENI CCTNNNNNAGG 1 cut(s) 129
BstF5I GGATG 5 cut(s) 121, 488, 658, 990, 1156
BstFNI CGCG 1 cut(s) 570
BstH2I RGCGCY 1 cut(s) 836
BstHHI GCGC 2 cut(s) 835, 1164
BstKTI GATC 4 cut(s) 142, 190, 799, 1039
BstMBI GATC 4 cut(s) 139, 187, 796, 1036
BstMWI GCNNNNNNNGC 6 cut(s) 456, 564, 612, 655, 716, 1252
BstNI CCWGG 4 cut(s) 246, 415, 900, 918
BstNSI RCATGY 3 cut(s) 320, 535, 952
BstSCI CCNGG 6 cut(s) 244, 413, 734, 898, 916, 1182
BstSLI GKGCMC 2 cut(s) 660, 1264
BstUI CGCG 1 cut(s) 570
BstV1I GCAGC 1 cut(s) 94
BstX2I RGATCY 1 cut(s) 139
BstYI RGATCY 1 cut(s) 139
BsuRI GGCC 2 cut(s) 877, 967
BtgI CCRYGG 3 cut(s) 487, 568, 1247
BtrI CACGTC 1 cut(s) 251
BtsCI GGATG 5 cut(s) 121, 488, 658, 990, 1156
BtsI GCAGTG 1 cut(s) 1262
BtsIMutI CAGTG 3 cut(s) 31, 595, 1262
Cac8I GCNNGC 2 cut(s) 875, 950
CaiI CAGNNNCTG 1 cut(s) 1019
CciI TCATGA 1 cut(s) 909
CfoI GCGC 2 cut(s) 835, 1164
Cfr13I GGNCC 4 cut(s) 49, 242, 257, 349
Cfr42I CCGCGG 1 cut(s) 571
Csp6I GTAC 2 cut(s) 492, 1180
CviAII CATG 8 cut(s) 11, 317, 532, 910, 949, 1099, 1133, 1243
CviQI GTAC 2 cut(s) 492, 1180
DdeI CTNAG 2 cut(s) 818, 828
DpnI GATC 4 cut(s) 141, 189, 798, 1038
DpnII GATC 4 cut(s) 139, 187, 796, 1036
DrdI GACNNNNNNGTC 1 cut(s) 255
DseDI GACNNNNNNGTC 1 cut(s) 255
Ecl136II GAGCTC 1 cut(s) 85
Eco130I CCWWGG 1 cut(s) 52
Eco24I GRGCYC 1 cut(s) 87
Eco47I GGWCC 4 cut(s) 49, 242, 257, 349
Eco53kI GAGCTC 1 cut(s) 85
EcoICRI GAGCTC 1 cut(s) 85
EcoNI CCTNNNNNAGG 1 cut(s) 129
EcoO109I RGGNCCY 1 cut(s) 49
EcoRII CCWGG 4 cut(s) 244, 413, 898, 916
EcoT14I CCWWGG 1 cut(s) 52
EcoT22I ATGCAT 1 cut(s) 1134
EcoT38I GRGCYC 1 cut(s) 87
ErhI CCWWGG 1 cut(s) 52
FaeI CATG 8 cut(s) 14, 320, 535, 913, 952, 1102, 1136, 1246
FalI AAGNNNNNCTT 2 cut(s) 216, 248
FaqI GGGAC 4 cut(s) 44, 243, 414, 717
FatI CATG 8 cut(s) 10, 316, 531, 909, 948, 1098, 1132, 1242
FauNDI CATATG 1 cut(s) 1192
FbaI TGATCA 1 cut(s) 1036
Fnu4HI GCNGC 5 cut(s) 108, 568, 571, 878, 953
FokI GGATG 5 cut(s) 108, 495, 665, 977, 1163
FriOI GRGCYC 1 cut(s) 87
Fsp4HI GCNGC 5 cut(s) 108, 568, 571, 878, 953
GlaI GCGC 2 cut(s) 834, 1163
GluI GCNGC 5 cut(s) 108, 568, 571, 878, 953
GsaI CCCAGC 1 cut(s) 1267
GsuI CTGGAG 2 cut(s) 397, 921
HaeII RGCGCY 1 cut(s) 836
HaeIII GGCC 2 cut(s) 877, 967
HapII CCGG 2 cut(s) 735, 1183
HhaI GCGC 2 cut(s) 835, 1164
Hin1II CATG 8 cut(s) 14, 320, 535, 913, 952, 1102, 1136, 1246
Hin6I GCGC 2 cut(s) 833, 1162
HinP1I GCGC 2 cut(s) 833, 1162
HincII GTYRAC 1 cut(s) 858
HindII GTYRAC 1 cut(s) 858
HindIII AAGCTT 2 cut(s) 168, 788
HinfI GANTC 6 cut(s) 73, 118, 298, 859, 1016, 1024
HpaII CCGG 2 cut(s) 735, 1183
HphI GGTGA 3 cut(s) 233, 350, 590
Hpy166II GTNNAC 3 cut(s) 314, 658, 858
Hpy8I GTNNAC 3 cut(s) 314, 658, 858
HpyAV CCTTC 5 cut(s) 85, 318, 496, 637, 661
HpyCH4III ACNGT 4 cut(s) 26, 516, 612, 1179
HpyCH4IV ACGT 4 cut(s) 250, 290, 304, 1002
HpyCH4V TGCA 6 cut(s) 547, 615, 658, 757, 1132, 1255
HpyF10VI GCNNNNNNNGC 6 cut(s) 456, 564, 612, 655, 716, 1252
HpyF3I CTNAG 2 cut(s) 818, 828
HpySE526I ACGT 4 cut(s) 250, 290, 304, 1002
Hsp92II CATG 8 cut(s) 14, 320, 535, 913, 952, 1102, 1136, 1246
HspAI GCGC 2 cut(s) 833, 1162
Ksp22I TGATCA 1 cut(s) 1036
KspI CCGCGG 1 cut(s) 571
Kzo9I GATC 4 cut(s) 139, 187, 796, 1036
LmnI GCTCC 5 cut(s) 461, 676, 724, 766, 1102
Lsp1109I GCAGC 1 cut(s) 94
LweI GCATC 3 cut(s) 473, 534, 964
MaeII ACGT 4 cut(s) 250, 290, 304, 1002
MaeIII GTNAC 3 cut(s) 476, 505, 632
MalI GATC 4 cut(s) 141, 189, 798, 1038
MbiI CCGCTC 1 cut(s) 459
MboI GATC 4 cut(s) 139, 187, 796, 1036
MboII GAAGA 4 cut(s) 236, 353, 1235, 1238
MfeI CAATTG 1 cut(s) 519
MflI RGATCY 1 cut(s) 139
MhlI GDGCHC 5 cut(s) 87, 660, 681, 771, 1264
MluCI AATT 4 cut(s) 519, 690, 729, 1007
MlyI GAGTC 2 cut(s) 82, 853
Mph1103I ATGCAT 1 cut(s) 1134
MseI TTAA 4 cut(s) 183, 234, 359, 824
MslI CAYNNNNRTG 1 cut(s) 867
MspA1I CMGCKG 1 cut(s) 570
MspI CCGG 2 cut(s) 735, 1183
MspR9I CCNGG 6 cut(s) 246, 415, 736, 900, 918, 1184
MunI CAATTG 1 cut(s) 519
Mva1269I GAATGC 1 cut(s) 981
MvaI CCWGG 4 cut(s) 246, 415, 900, 918
MvnI CGCG 1 cut(s) 570
MwoI GCNNNNNNNGC 6 cut(s) 456, 564, 612, 655, 716, 1252
NciI CCSGG 2 cut(s) 736, 1184
NdeI CATATG 1 cut(s) 1192
NdeII GATC 4 cut(s) 139, 187, 796, 1036
NlaIII CATG 8 cut(s) 14, 320, 535, 913, 952, 1102, 1136, 1246
NlaIV GGNNCC 1 cut(s) 259
NmuCI GTSAC 1 cut(s) 632
NsiI ATGCAT 1 cut(s) 1134
NspI RCATGY 3 cut(s) 320, 535, 952
PaeI GCATGC 1 cut(s) 952
PagI TCATGA 1 cut(s) 909
PciI ACATGT 1 cut(s) 316
PctI GAATGC 1 cut(s) 981
PfeI GAWTC 4 cut(s) 118, 298, 1016, 1024
PflMI CCANNNNNTGG 2 cut(s) 251, 1019
PfoI TCCNGGA 2 cut(s) 413, 898
PkrI GCNGC 5 cut(s) 109, 569, 572, 879, 954
PleI GAGTC 2 cut(s) 81, 853
PpsI GAGTC 2 cut(s) 81, 853
PpuMI RGGWCCY 1 cut(s) 49
PscI ACATGT 1 cut(s) 316
Psp124BI GAGCTC 1 cut(s) 87
Psp1406I AACGTT 1 cut(s) 290
Psp5II RGGWCCY 1 cut(s) 49
Psp6I CCWGG 4 cut(s) 244, 413, 898, 916
PspFI CCCAGC 1 cut(s) 1263
PspGI CCWGG 4 cut(s) 244, 413, 898, 916
PspN4I GGNNCC 1 cut(s) 259
PspPI GGNCC 4 cut(s) 49, 242, 257, 349
PspPPI RGGWCCY 1 cut(s) 49
PstNI CAGNNNCTG 1 cut(s) 1019
PsuI RGATCY 1 cut(s) 139
RsaI GTAC 2 cut(s) 493, 1181
RsaNI GTAC 2 cut(s) 492, 1180
RseI CAYNNNNRTG 1 cut(s) 867
SacI GAGCTC 1 cut(s) 87
SacII CCGCGG 1 cut(s) 571
SaqAI TTAA 4 cut(s) 183, 234, 359, 824
SatI GCNGC 5 cut(s) 108, 568, 571, 878, 953
Sau3AI GATC 4 cut(s) 139, 187, 796, 1036
Sau96I GGNCC 4 cut(s) 49, 242, 257, 349
SchI GAGTC 2 cut(s) 82, 853
ScrFI CCNGG 6 cut(s) 246, 415, 736, 900, 918, 1184
SduI GDGCHC 5 cut(s) 87, 660, 681, 771, 1264
SfaNI GCATC 3 cut(s) 473, 534, 964
Sfr303I CCGCGG 1 cut(s) 571
SgrBI CCGCGG 1 cut(s) 571
SinI GGWCC 4 cut(s) 49, 242, 257, 349
SmiMI CAYNNNNRTG 1 cut(s) 867
SmlI CTYRAG 2 cut(s) 86, 761
SmoI CTYRAG 2 cut(s) 86, 761
SphI GCATGC 1 cut(s) 952
Sse9I AATT 4 cut(s) 519, 690, 729, 1007
SsiI CCGC 6 cut(s) 459, 568, 570, 784, 878, 953
SspI AATATT 2 cut(s) 421, 1144
SstI GAGCTC 1 cut(s) 87
StyD4I CCNGG 6 cut(s) 244, 413, 734, 898, 916, 1182
StyI CCWWGG 1 cut(s) 52
TaaI ACNGT 4 cut(s) 26, 516, 612, 1179
TaiI ACGT 4 cut(s) 253, 293, 307, 1005
TaqI TCGA 1 cut(s) 17
TasI AATT 4 cut(s) 519, 690, 729, 1007
TauI GCSGC 4 cut(s) 570, 573, 880, 955
TfiI GAWTC 4 cut(s) 118, 298, 1016, 1024
Tru1I TTAA 4 cut(s) 183, 234, 359, 824
Tru9I TTAA 4 cut(s) 183, 234, 359, 824
TscAI CASTG 3 cut(s) 31, 595, 1262
TseFI GTSAC 1 cut(s) 632
TseI GCWGC 1 cut(s) 107
Tsp45I GTSAC 1 cut(s) 632
TspDTI ATGAA 7 cut(s) 189, 515, 729, 926, 961, 979, 1236
TspGWI ACGGA 3 cut(s) 255, 495, 696
TspRI CASTG 3 cut(s) 31, 595, 1262
Van91I CCANNNNNTGG 2 cut(s) 251, 1019
VneI GTGCAC 1 cut(s) 656
VpaK11BI GGWCC 4 cut(s) 49, 242, 257, 349
XagI CCTNNNNNAGG 1 cut(s) 129
XapI RAATTY 1 cut(s) 1007
XceI RCATGY 3 cut(s) 320, 535, 952
Zsp2I ATGCAT 1 cut(s) 1134
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.