Rorug07G0163900

No description available

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
13153372 .. 13157934
4563 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0163900.1

Sequence Viewer

Length: 2046 bp
ATGGCTAAGTGCAACAAACCACAGAAGAATGATCAACCTTCGATCAAGTACAGGTGGTACCCAATTGGCCAGGCGTCCCCTGGGCTTGCTAATTTCGTTCATGAAAGATCTGCCGACACAGTTTCTCGTAAAGCTAATGAGCAAGGGAATAGAAAATCGCAGCACAAGTCTCCTGAGATATTGAGCACTACTGAGCTCATCTCAGCAGTTGGCCAGATATGGGATTATGCAAGTCGTCCTCTTGGATTATTTCAACCCAAGGCAAATTCAGATGACATTGACAGTAATTATCGGAAAGAGGTTATCTTATCTGGTCTGGATGGGGAAGCTCTTATTTCAGAGAATAGTGGTAATTTGTCTGTTAATTTGAGGAATTCTGATAAGATTCCAACAATACCACAACCAAGTTTAGATATAACACAGGTAAGCCAAAAGATATCAGTATTTGGACATTGCAGTAAAAGTTACTATCAGGCTTCATTTTGGAGGTTATTGGATGGTGGTGCTAATGTGCCTAAAGATTCTTGGAAGGGAAAAGGACTTGCAAGTTTAGAAGTCTCATACCAACTGGGAAGTATGTATGGATGGATGAATGATGTGATTTCTTCTGGGGCAAACCGCCCAGTCAAAGCTATTGAGATTGAGAACAGAAATGACCAATGTTGCATTCCAGTAGATACTGTCACTGTTGCAGGCAGCTCTATTTCAGGAGAAACAACAAGAGTTGTAGATGACTTGGCCAGAACTGCTGTGTCTAACCCTGCTCCAGTCAAATCTGGTAACTTATATAAGGATGATGATGAAAAATTGGAGATCAATACAAGAACCTCTCTGTATTCAGACTATTTCCTCGTAGTTGGTGAGGCAGATGACATTATTTCAAGGGCTCCATGTTCCAATCTTCATGCGGATTATCATATAGACTCTTTAACTTCCTGTGGTAATGGATTTGAAGAATGTCTTCAGAAGATAGATGATCATGACCTACTTGACAACAAAAAGAAACAGCCAGACAAGTTTGTTATCCCGGATGGATGCAAGGTGCAGCCCTGTGCATTAGCACGTGATAAGCCTCATACTTCTCTTGCTAAACAAGAGCATGCCTTTGCAGGTGCATTGTCTGGAATTTTCGTTAGCATTTGTCTTCATCCTGTTGATACAATCAAGACAGTAATTCAATCTTGCCGGGCCGAGCAAAAATGTATATGGTACATTGGAAAATCAATTGTGTCTGATAGAGGCTTAACTGGACTCTATCGTGGTATTGCTACCAACGTTGCATCTTCAGCTCCAATTTCTGCAGTTTACACTTTCACATATGAATCAGTTAAAGGATCTTTGCTTCCTTTATTTCCGAAGGAATACTATTCTTTTGCCCATTGTGTGGCAGGTGGTTGTGCAAGCATTGCTACTTCCTTTATCTTTACTCCCAGTGAACGTATAAAGCAGCAGATGCAAGTTGGGTCACAGTATCACAACTGCTGGAATGCTTTGGTTGGCATCATTCAGAAGGGCGGTTTAACTTCATTATATGCTGGATGGGGGGCTGTACTCTGCAGGAATGTTCCACACTCAATTGTTAAGTTCTACACCTATGAAAGCTTGAAGAAATTGATGTTGTCTTCAGAACAATCTAACAATCACCCCACCACATTACAAACACTACTTTGTGGAGGACTGGCTGGATCTACTGCTGCGTTATTCACTACTCCTTTTGATGTTGTGAAAACGAGAATGCAGACGCAGATTCCAGGGTCTGTGAGCCAGTATAACAGTGTGATTCACGCCCTTCAGGAAATAGGAAAGAAAGAAGGTTTGAAAGGCCTATACAGGGGATTGACTCCAAGATTGGTTATGTATATGTCACAAGGCGCGCTCTTCTTTGCATCGTATGAATTTTTCAAGAGATCTTTTTCTTTGGTGAAGCAACAACCTAATGCTCAAAGAATCCAATACCAACAAAACATGGAAGATGATCCAGTAACACCCTCAACATTCTCGCCACCGTCGTCAACACCAGCAAGACTGCACAGTCTACAGTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

681

Amino Acids

74.84

Weight (kDa)

8.4

Isoelectric Point (pI)

39.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mito_carr PF00153 366 - 447 3.7e-16 Mitochondrial carrier protein
Mito_carr PF00153 456 - 541 4.9e-18 Mitochondrial carrier protein
Mito_carr PF00153 549 - 639 6.2e-27 Mitochondrial carrier protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000267)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19660 FvH4_1g30321 FvH4_4g07610 FvH4_5g00140 FvH4_6g23340 FvH4_6g29890
rosa_chinensis RchiOBHm_Chr1g0319561 RchiOBHm_Chr1g0320181 RchiOBHm_Chr1g0330531 RchiOBHm_Chr1g0339901 RchiOBHm_Chr1g0341281 RchiOBHm_Chr1g0346381 RchiOBHm_Chr1g0351211 RchiOBHm_Chr1g0358041 RchiOBHm_Chr1g0367541 RchiOBHm_Chr2g0119361 RchiOBHm_Chr2g0120321 RchiOBHm_Chr2g0140171 RchiOBHm_Chr2g0150711 RchiOBHm_Chr2g0151251 RchiOBHm_Chr2g0160901 RchiOBHm_Chr3g0447381 RchiOBHm_Chr3g0459951 RchiOBHm_Chr3g0465101 RchiOBHm_Chr4g0392281 RchiOBHm_Chr4g0405571 RchiOBHm_Chr4g0412841 RchiOBHm_Chr4g0413331 RchiOBHm_Chr4g0422711 RchiOBHm_Chr4g0422751 RchiOBHm_Chr4g0423141 RchiOBHm_Chr4g0423271 RchiOBHm_Chr4g0424711 RchiOBHm_Chr4g0427731 RchiOBHm_Chr4g0442201 RchiOBHm_Chr5g0026201 RchiOBHm_Chr5g0050261 RchiOBHm_Chr6g0277431 RchiOBHm_Chr6g0279711 RchiOBHm_Chr6g0280101 RchiOBHm_Chr6g0280951 RchiOBHm_Chr6g0295101 RchiOBHm_Chr6g0312921 RchiOBHm_Chr7g0201181 RchiOBHm_Chr7g0204591 RchiOBHm_Chr7g0204721 RchiOBHm_Chr7g0204801 RchiOBHm_Chr7g0208411 RchiOBHm_Chr7g0213041 RchiOBHm_Chr7g0215471
rosa_laevigata RLG00000004867 RLG00000018361 RLG00000036656
rosa_multiflora Rmu_sc0000376.1_g000034 Rmu_sc0001576.1_g000002 Rmu_sc0001971.1_g000008 Rmu_sc0002105.1_g000002 Rmu_sc0002310.1_g000018 Rmu_sc0005120.1_g000007 Rmu_sc0005665.1_g000017 Rmu_sc0005715.1_g000010 Rmu_sc0009785.1_g000031 Rmu_sc0010202.1_g000013 Rmu_sc0040921.1_g000004
rosa_roxburghii Rroxscaffold_1G00003120 Rroxscaffold_1G00026660 Rroxscaffold_2G00098060 Rroxscaffold_2G00111130 Rroxscaffold_4G00279230 Rroxscaffold_4G00295650 Rroxscaffold_5G00361140 Rroxscaffold_5G00374320 Rroxscaffold_6G00406950
rosa_rugosa Rorug01G0102500 Rorug01G0165700 Rorug01G0165700 Rorug01G0195800 Rorug01G0195800 Rorug01G0217200 Rorug01G0335400 Rorug02G0029300 Rorug02G0036800 Rorug02G0073300 Rorug02G0279100 Rorug02G0326300 Rorug02G0338400 Rorug02G0371300.1 Rorug02G0421700 Rorug02G0458000 Rorug03G0105100 Rorug03G0105700 Rorug03G0220900 Rorug03G0272600 Rorug03G0322700 Rorug03G0336800 Rorug03G0356900 Rorug03G0364200.1 Rorug04G0028300 Rorug04G0032600 Rorug04G0034400 Rorug04G0203900 Rorug05G0192000 Rorug05G0192000 Rorug05G0313700 Rorug05G0391500 Rorug05G0403500.1 Rorug06G0032700 Rorug06G0174700 Rorug06G0409900 Rorug06G0458800 Rorug07G0114100 Rorug07G0137600 Rorug07G0163900 Rorug07G0244900 Rorug07G0274700 Rorug07G0310400
rosa_samantha Rh1AG070100 Rh1AG070300 Rh1AG070600 Rh1AG070900 Rh1BG181700 Rh3DG183400 Rh4CG044400 Rh4CG163300 Rh5BG000300 Rh6AG036500 Rh7AG328500 Rh7BG204000 Rh7CG345900
rosa_wichuraiana Rw2G022850 Rw6G002520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1100, 1379
AasI GACNNNNNNGTC 1 cut(s) 2031
Acc36I ACCTGC 2 cut(s) 1100, 1379
Acc65I GGTACC 1 cut(s) 57
AccB1I GGYRCC 1 cut(s) 57
AccB7I CCANNNNNTGG 1 cut(s) 1384
AccI GTMKAC 1 cut(s) 2035
AccII CGCG 1 cut(s) 1874
AciI CCGC 3 cut(s) 619, 908, 1515
AclI AACGTT 1 cut(s) 1275
AclWI GGATC 3 cut(s) 1342, 1693, 1970
AcoI YGGCCR 3 cut(s) 67, 211, 738
AcsI RAATTY 4 cut(s) 265, 373, 1125, 1895
AcuI CTGAAG 4 cut(s) 947, 1269, 1608, 1775
AcvI CACGTG 1 cut(s) 1064
AcyI GRCGYC 1 cut(s) 74
AfaI GTAC 4 cut(s) 50, 59, 1211, 1551
AfiI CCNNNNNNNGG 3 cut(s) 220, 1384, 1831
AgsI TTSAA 7 cut(s) 254, 882, 953, 1178, 1606, 1819, 1903
AjnI CCWGG 3 cut(s) 69, 79, 1750
AjuI GAANNNNNNNTTGG 2 cut(s) 651, 683
AluBI AGCT 7 cut(s) 134, 196, 329, 632, 699, 1289, 1602
AluI AGCT 7 cut(s) 134, 196, 329, 632, 699, 1289, 1602
Alw21I GWGCWC 2 cut(s) 188, 198
Alw26I GTCTC 2 cut(s) 174, 562
AlwI GGATC 3 cut(s) 1342, 1693, 1970
AlwNI CAGNNNCTG 1 cut(s) 1757
AoxI GGCC 5 cut(s) 67, 211, 738, 1188, 1822
ApeKI GCWGC 5 cut(s) 160, 696, 1045, 1447, 1694
ApoI RAATTY 4 cut(s) 265, 373, 1125, 1895
Asp700I GAANNNNTTC 1 cut(s) 960
Asp718I GGTACC 1 cut(s) 57
AspLEI GCGC 2 cut(s) 1874, 1876
AspS9I GGNCC 1 cut(s) 1188
AsuC2I CCSGG 2 cut(s) 1028, 1187
AsuHPI GGTGA 3 cut(s) 872, 1634, 1933
BalI TGGCCA 3 cut(s) 69, 213, 740
BanI GGYRCC 1 cut(s) 57
BanII GRGCYC 2 cut(s) 198, 889
BbrPI CACGTG 1 cut(s) 1064
BbsI GAAGAC 3 cut(s) 953, 1136, 1614
Bbv12I GWGCWC 2 cut(s) 188, 198
BbvI GCAGC 5 cut(s) 172, 708, 1057, 1459, 1681
BccI CCATC 5 cut(s) 314, 491, 579, 1025, 1533
BciT130I CCWGG 3 cut(s) 71, 81, 1752
BclI TGATCA 2 cut(s) 31, 976
BcnI CCSGG 2 cut(s) 1028, 1187
BcoDI GTCTC 2 cut(s) 174, 562
BfmI CTRYAG 3 cut(s) 1299, 1555, 2036
BfuAI ACCTGC 2 cut(s) 1100, 1379
BglII AGATCT 2 cut(s) 107, 1907
BisI GCNGC 5 cut(s) 161, 697, 1046, 1448, 1695
BlsI GCNGC 5 cut(s) 162, 698, 1047, 1449, 1696
Bme1390I CCNGG 5 cut(s) 71, 81, 1028, 1187, 1752
BmgT120I GGNCC 1 cut(s) 1188
BmiI GGNNCC 2 cut(s) 59, 888
BmrFI CCNGG 5 cut(s) 71, 81, 1028, 1187, 1752
BmrI ACTGGG 3 cut(s) 578, 617, 1425
BmsI GCATC 5 cut(s) 1025, 1289, 1443, 1509, 1895
BmuI ACTGGG 3 cut(s) 578, 617, 1425
BpiI GAAGAC 3 cut(s) 953, 1136, 1614
BplI GAGNNNNNCTC 2 cut(s) 185, 217
BpmI CTGGAG 1 cut(s) 750
BpuMI CCSGG 2 cut(s) 1028, 1187
BsaAI YACGTR 1 cut(s) 1064
BsaHI GRCGYC 1 cut(s) 74
BsaJI CCNNGG 4 cut(s) 79, 80, 258, 1751
Bsc4I CCNNNNNNNGG 3 cut(s) 220, 1384, 1831
Bse1I ACTGG 9 cut(s) 573, 623, 671, 767, 1252, 1431, 1683, 1765, 1979
Bse3DI GCAATG 2 cut(s) 451, 1404
BseBI CCWGG 3 cut(s) 71, 81, 1752
BseDI CCNNGG 4 cut(s) 79, 80, 258, 1751
BseGI GGATG 9 cut(s) 325, 502, 590, 594, 799, 1036, 1040, 1147, 1544
BseLI CCNNNNNNNGG 3 cut(s) 220, 1384, 1831
BseMI GCAATG 2 cut(s) 451, 1404
BseMII CTCAG 3 cut(s) 165, 183, 216
BseNI ACTGG 9 cut(s) 573, 623, 671, 767, 1252, 1431, 1683, 1765, 1979
BsePI GCGCGC 1 cut(s) 1872
BseXI GCAGC 5 cut(s) 172, 708, 1057, 1459, 1681
BsgI GTGCAG 2 cut(s) 1064, 2012
Bsh1236I CGCG 1 cut(s) 1874
BshFI GGCC 5 cut(s) 69, 213, 740, 1190, 1824
BshNI GGYRCC 1 cut(s) 57
BsiHKAI GWGCWC 2 cut(s) 188, 198
BsiSI CCGG 2 cut(s) 1028, 1186
BslFI GGGAC 1 cut(s) 61
BslI CCNNNNNNNGG 3 cut(s) 220, 1384, 1831
BsmAI GTCTC 2 cut(s) 174, 562
BsmFI GGGAC 1 cut(s) 61
BsmI GAATGC 3 cut(s) 666, 1492, 1740
BsnI GGCC 5 cut(s) 69, 213, 740, 1190, 1824
Bsp1286I GDGCHC 3 cut(s) 188, 198, 889
Bsp143I GATC 9 cut(s) 31, 42, 107, 813, 976, 1334, 1685, 1907, 1975
BspACI CCGC 3 cut(s) 619, 908, 1515
BspANI GGCC 5 cut(s) 69, 213, 740, 1190, 1824
BspCNI CTCAG 3 cut(s) 166, 184, 215
BspFNI CGCG 1 cut(s) 1874
BspHI TCATGA 3 cut(s) 100, 979, 2042
BspLI GGNNCC 2 cut(s) 59, 888
BspMAI CTGCAG 2 cut(s) 1303, 1559
BspMI ACCTGC 2 cut(s) 1100, 1379
BspPI GGATC 3 cut(s) 1342, 1693, 1970
BspQI GCTCTTC 1 cut(s) 1883
BspT107I GGYRCC 1 cut(s) 57
BsrDI GCAATG 2 cut(s) 451, 1404
BsrI ACTGG 9 cut(s) 573, 623, 671, 767, 1252, 1431, 1683, 1765, 1979
BssECI CCNNGG 4 cut(s) 79, 80, 258, 1751
BssHII GCGCGC 1 cut(s) 1872
BssMI GATC 9 cut(s) 31, 42, 107, 813, 976, 1334, 1685, 1907, 1975
BssNI GRCGYC 1 cut(s) 74
BssT1I CCWWGG 1 cut(s) 258
Bst2UI CCWGG 3 cut(s) 71, 81, 1752
Bst6I CTCTTC 1 cut(s) 1883
BstACI GRCGYC 1 cut(s) 74
BstAPI GCANNNNNTGC 2 cut(s) 1406, 1453
BstBAI YACGTR 1 cut(s) 1064
BstC8I GCNNGC 5 cut(s) 87, 694, 1101, 1402, 1874
BstDEI CTNAG 4 cut(s) 6, 174, 192, 202
BstF5I GGATG 9 cut(s) 325, 502, 590, 594, 799, 1036, 1040, 1147, 1544
BstFNI CGCG 1 cut(s) 1874
BstHHI GCGC 2 cut(s) 1874, 1876
BstKTI GATC 9 cut(s) 34, 45, 110, 816, 979, 1337, 1688, 1910, 1978
BstMAI GTCTC 2 cut(s) 174, 562
BstMBI GATC 9 cut(s) 31, 42, 107, 813, 976, 1334, 1685, 1907, 1975
BstMWI GCNNNNNNNGC 4 cut(s) 746, 1286, 1406, 1453
BstNI CCWGG 3 cut(s) 71, 81, 1752
BstNSI RCATGY 1 cut(s) 1103
BstSCI CCNGG 5 cut(s) 69, 79, 1026, 1185, 1750
BstSFI CTRYAG 3 cut(s) 1299, 1555, 2036
BstUI CGCG 1 cut(s) 1874
BstV1I GCAGC 5 cut(s) 172, 708, 1057, 1459, 1681
BstV2I GAAGAC 3 cut(s) 953, 1136, 1614
BstX2I RGATCY 4 cut(s) 107, 1334, 1685, 1907
BstYI RGATCY 4 cut(s) 107, 1334, 1685, 1907
BsuRI GGCC 5 cut(s) 69, 213, 740, 1190, 1824
BtsCI GGATG 9 cut(s) 325, 502, 590, 594, 799, 1036, 1040, 1147, 1544
BtsIMutI CAGTG 3 cut(s) 684, 1438, 1780
BveI ACCTGC 2 cut(s) 1100, 1379
Cac8I GCNNGC 5 cut(s) 87, 694, 1101, 1402, 1874
CaiI CAGNNNCTG 1 cut(s) 1757
CciI TCATGA 3 cut(s) 100, 979, 2042
CfoI GCGC 2 cut(s) 1874, 1876
Cfr13I GGNCC 1 cut(s) 1188
CseI GACGC 2 cut(s) 63, 1750
Csp6I GTAC 4 cut(s) 49, 58, 1210, 1550
CviAII CATG 7 cut(s) 101, 891, 905, 980, 1100, 1966, 2043
CviQI GTAC 4 cut(s) 49, 58, 1210, 1550
DdeI CTNAG 4 cut(s) 6, 174, 192, 202
DpnI GATC 9 cut(s) 33, 44, 109, 815, 978, 1336, 1687, 1909, 1977
DpnII GATC 9 cut(s) 31, 42, 107, 813, 976, 1334, 1685, 1907, 1975
DrdI GACNNNNNNGTC 1 cut(s) 2031
DseDI GACNNNNNNGTC 1 cut(s) 2031
EaeI YGGCCR 3 cut(s) 67, 211, 738
Eam1104I CTCTTC 1 cut(s) 1883
EarI CTCTTC 1 cut(s) 1883
Ecl136II GAGCTC 1 cut(s) 196
Eco130I CCWWGG 1 cut(s) 258
Eco147I AGGCCT 1 cut(s) 1824
Eco24I GRGCYC 2 cut(s) 198, 889
Eco32I GATATC 1 cut(s) 438
Eco53kI GAGCTC 1 cut(s) 196
Eco57I CTGAAG 4 cut(s) 947, 1269, 1608, 1775
Eco72I CACGTG 1 cut(s) 1064
EcoICRI GAGCTC 1 cut(s) 196
EcoRI GAATTC 1 cut(s) 373
EcoRII CCWGG 3 cut(s) 69, 79, 1750
EcoRV GATATC 1 cut(s) 438
EcoT14I CCWWGG 1 cut(s) 258
EcoT38I GRGCYC 2 cut(s) 198, 889
ErhI CCWWGG 1 cut(s) 258
FaeI CATG 7 cut(s) 104, 894, 908, 983, 1103, 1969, 2046
FalI AAGNNNNNCTT 2 cut(s) 945, 977
FaqI GGGAC 1 cut(s) 61
FatI CATG 7 cut(s) 100, 890, 904, 979, 1099, 1965, 2042
FauNDI CATATG 1 cut(s) 1318
FbaI TGATCA 2 cut(s) 31, 976
FblI GTMKAC 1 cut(s) 2035
Fnu4HI GCNGC 5 cut(s) 161, 697, 1046, 1448, 1695
FokI GGATG 9 cut(s) 332, 509, 597, 601, 806, 1043, 1047, 1134, 1551
FriOI GRGCYC 2 cut(s) 198, 889
Fsp4HI GCNGC 5 cut(s) 161, 697, 1046, 1448, 1695
GlaI GCGC 2 cut(s) 1873, 1875
GluI GCNGC 5 cut(s) 161, 697, 1046, 1448, 1695
GsuI CTGGAG 1 cut(s) 750
HaeIII GGCC 5 cut(s) 69, 213, 740, 1190, 1824
HapII CCGG 2 cut(s) 1028, 1186
HgaI GACGC 2 cut(s) 63, 1750
HhaI GCGC 2 cut(s) 1874, 1876
Hin1I GRCGYC 1 cut(s) 74
Hin1II CATG 7 cut(s) 104, 894, 908, 983, 1103, 1969, 2046
Hin6I GCGC 2 cut(s) 1872, 1874
HinP1I GCGC 2 cut(s) 1872, 1874
HincII GTYRAC 1 cut(s) 2013
HindII GTYRAC 1 cut(s) 2013
HindIII AAGCTT 1 cut(s) 1600
HinfI GANTC 9 cut(s) 385, 521, 923, 1251, 1322, 1747, 1780, 1840, 1947
HpaII CCGG 2 cut(s) 1028, 1186
HphI GGTGA 3 cut(s) 872, 1634, 1933
Hpy166II GTNNAC 4 cut(s) 1306, 1436, 2013, 2036
Hpy8I GTNNAC 4 cut(s) 1306, 1436, 2013, 2036
Hpy99I CGWCG 1 cut(s) 2011
HpyAV CCTTC 6 cut(s) 48, 523, 1351, 1504, 1799, 1805
HpyCH4IV ACGT 3 cut(s) 1063, 1275, 1438
HpyF10VI GCNNNNNNNGC 4 cut(s) 746, 1286, 1406, 1453
HpyF3I CTNAG 4 cut(s) 6, 174, 192, 202
HpySE526I ACGT 3 cut(s) 1063, 1275, 1438
Hsp92I GRCGYC 1 cut(s) 74
Hsp92II CATG 7 cut(s) 104, 894, 908, 983, 1103, 1969, 2046
HspAI GCGC 2 cut(s) 1872, 1874
KpnI GGTACC 1 cut(s) 61
Ksp22I TGATCA 2 cut(s) 31, 976
Kzo9I GATC 9 cut(s) 31, 42, 107, 813, 976, 1334, 1685, 1907, 1975
LguI GCTCTTC 1 cut(s) 1883
LmnI GCTCC 3 cut(s) 769, 892, 1294
Lsp1109I GCAGC 5 cut(s) 172, 708, 1057, 1459, 1681
LweI GCATC 5 cut(s) 1025, 1289, 1443, 1509, 1895
MaeII ACGT 3 cut(s) 1063, 1275, 1438
MaeIII GTNAC 6 cut(s) 464, 682, 779, 1464, 1863, 1981
MalI GATC 9 cut(s) 33, 44, 109, 815, 978, 1336, 1687, 1909, 1977
MboI GATC 9 cut(s) 31, 42, 107, 813, 976, 1334, 1685, 1907, 1975
MfeI CAATTG 3 cut(s) 63, 1224, 1575
MflI RGATCY 4 cut(s) 107, 1334, 1685, 1907
MhlI GDGCHC 3 cut(s) 188, 198, 889
MlsI TGGCCA 3 cut(s) 69, 213, 740
MluNI TGGCCA 3 cut(s) 69, 213, 740
MlyI GAGTC 3 cut(s) 917, 1245, 1834
MmeI TCCRAC 1 cut(s) 413
Mox20I TGGCCA 3 cut(s) 69, 213, 740
MroXI GAANNNNTTC 1 cut(s) 960
MscI TGGCCA 3 cut(s) 69, 213, 740
MseI TTAA 6 cut(s) 363, 929, 1244, 1329, 1520, 1581
Msp20I TGGCCA 3 cut(s) 69, 213, 740
MspI CCGG 2 cut(s) 1028, 1186
MspR9I CCNGG 5 cut(s) 71, 81, 1028, 1187, 1752
MunI CAATTG 3 cut(s) 63, 1224, 1575
Mva1269I GAATGC 3 cut(s) 666, 1492, 1740
MvaI CCWGG 3 cut(s) 71, 81, 1752
MvnI CGCG 1 cut(s) 1874
MwoI GCNNNNNNNGC 4 cut(s) 746, 1286, 1406, 1453
NciI CCSGG 2 cut(s) 1028, 1187
NdeI CATATG 1 cut(s) 1318
NdeII GATC 9 cut(s) 31, 42, 107, 813, 976, 1334, 1685, 1907, 1975
NlaIII CATG 7 cut(s) 104, 894, 908, 983, 1103, 1969, 2046
NlaIV GGNNCC 2 cut(s) 59, 888
NmeAIII GCCGAG 1 cut(s) 1216
NmuCI GTSAC 3 cut(s) 682, 1464, 1863
NspI RCATGY 1 cut(s) 1103
PaeI GCATGC 1 cut(s) 1103
PagI TCATGA 3 cut(s) 100, 979, 2042
PaqCI CACCTGC 2 cut(s) 1100, 1379
PasI CCCWGGG 1 cut(s) 80
PauI GCGCGC 1 cut(s) 1872
PceI AGGCCT 1 cut(s) 1824
PciSI GCTCTTC 1 cut(s) 1883
PcsI WCGNNNNNNNCGW 1 cut(s) 2006
PctI GAATGC 3 cut(s) 666, 1492, 1740
PdmI GAANNNNTTC 1 cut(s) 960
PfeI GAWTC 6 cut(s) 385, 521, 1322, 1747, 1780, 1947
PflMI CCANNNNNTGG 1 cut(s) 1384
PfoI TCCNGGA 1 cut(s) 1026
PkrI GCNGC 5 cut(s) 162, 698, 1047, 1449, 1696
PleI GAGTC 3 cut(s) 917, 1245, 1834
PmaCI CACGTG 1 cut(s) 1064
PmlI CACGTG 1 cut(s) 1064
PpsI GAGTC 3 cut(s) 917, 1245, 1834
Ppu21I YACGTR 1 cut(s) 1064
Psp124BI GAGCTC 1 cut(s) 198
Psp1406I AACGTT 1 cut(s) 1275
Psp6I CCWGG 3 cut(s) 69, 79, 1750
PspCI CACGTG 1 cut(s) 1064
PspGI CCWGG 3 cut(s) 69, 79, 1750
PspN4I GGNNCC 2 cut(s) 59, 888
PspPI GGNCC 1 cut(s) 1188
PstI CTGCAG 2 cut(s) 1303, 1559
PstNI CAGNNNCTG 1 cut(s) 1757
PsuI RGATCY 4 cut(s) 107, 1334, 1685, 1907
PteI GCGCGC 1 cut(s) 1872
RsaI GTAC 4 cut(s) 50, 59, 1211, 1551
RsaNI GTAC 4 cut(s) 49, 58, 1210, 1550
SacI GAGCTC 1 cut(s) 198
SapI GCTCTTC 1 cut(s) 1883
SaqAI TTAA 6 cut(s) 363, 929, 1244, 1329, 1520, 1581
SatI GCNGC 5 cut(s) 161, 697, 1046, 1448, 1695
Sau3AI GATC 9 cut(s) 31, 42, 107, 813, 976, 1334, 1685, 1907, 1975
Sau96I GGNCC 1 cut(s) 1188
SchI GAGTC 3 cut(s) 917, 1245, 1834
ScrFI CCNGG 5 cut(s) 71, 81, 1028, 1187, 1752
SduI GDGCHC 3 cut(s) 188, 198, 889
SfaNI GCATC 5 cut(s) 1025, 1289, 1443, 1509, 1895
SfcI CTRYAG 3 cut(s) 1299, 1555, 2036
SphI GCATGC 1 cut(s) 1103
SseBI AGGCCT 1 cut(s) 1824
SsiI CCGC 3 cut(s) 619, 908, 1515
SstI GAGCTC 1 cut(s) 198
StuI AGGCCT 1 cut(s) 1824
StyD4I CCNGG 5 cut(s) 69, 79, 1026, 1185, 1750
StyI CCWWGG 1 cut(s) 258
TaiI ACGT 3 cut(s) 1066, 1278, 1441
TaqI TCGA 1 cut(s) 41
TatI WGTACW 2 cut(s) 48, 1549
TfiI GAWTC 6 cut(s) 385, 521, 1322, 1747, 1780, 1947
Tru1I TTAA 6 cut(s) 363, 929, 1244, 1329, 1520, 1581
Tru9I TTAA 6 cut(s) 363, 929, 1244, 1329, 1520, 1581
TscAI CASTG 3 cut(s) 691, 1438, 1780
TseFI GTSAC 3 cut(s) 682, 1464, 1863
TseI GCWGC 5 cut(s) 160, 696, 1045, 1447, 1694
Tsp45I GTSAC 3 cut(s) 682, 1464, 1863
TspRI CASTG 3 cut(s) 691, 1438, 1780
Van91I CCANNNNNTGG 1 cut(s) 1384
XapI RAATTY 4 cut(s) 265, 373, 1125, 1895
XceI RCATGY 1 cut(s) 1103
XcmI CCANNNNNNNNNTGG 1 cut(s) 77
XmiI GTMKAC 1 cut(s) 2035
XmnI GAANNNNTTC 1 cut(s) 960
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.