Rmu_sc0010202.1_g000013

ASCH domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010202.1
OG0000267
Physical Location & Seq
Forward (+)
65487 .. 67763
2277 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010202.1_g000013.1.cds

Sequence Viewer

Length: 1488 bp
atggtcctatccgggagggcgacatcctcaccctgctcgagtccgatagagaagcaagaaggcgaccaatctcaggtctccgagctctgcctccagcctttcaagccccaccggccaccgccgaactcggggttggagacttggagcacttccgagtccgaaaaacggaacacaacgagcaacttgcaaggctacaaccaacaacccctcttcgtcttctcctcctcggctcctcaagtcctcctcttcttctcttctgagtttctaatgggttcaatttcaaatggcattgatttccttttgatgttgatcttgattttaattaagatatatgaagctgctattagaggtcttaccctggttgaagttcctctcccgcttaaatttccacttccaaatccacaagatccattttccttgaagctggggtctatatctgcaaacgttgatcaatctagaacatctgaagagggaagatcttcgagtatcaatgaagccatagctagtgcacaagcagctgctacacagttctccagaaaagctcaaactaggccggcctattttttttcttccttcactttgttaagaagtccaagccccagagtgatgctccgtccggcggcgcgtccttggggagtcgtcgtcggacgggccggtgatggttctgtgcactccagcgagggtttctggctgagacgtggcccaaggcaggtggatggtggttgtctctctagttggacagagcgatctcgatctgtccttcgcgggttgtgggagagcgcatgtgaggaacggcggtactgcgcagttggccggcagcgaactctagggtcatcaaagcaccggagatctgggcgatggcagcggcttcaaactcaggacagagtcaatcccgaaagggatctgttccgccttggggtcctgccgctgtggtcaaaagaactcgatccggggtctagagatgctatgtggcggtgtggtgtggccaggcggtggggtggtggtgcgttgcggcggcgcggtggagagagagtatggtggcagcgatggctgcctgtggcgctagaggtccttactggggagagtggtgattgggccgggactttgggcttaggctcttgctggttgtgctttgtcttttgttggttacagtttagttgttctgtttgtttagttgttttgttgacaataagtctctaccatgtttggatagagcgaagtgggccttgtgccggtctttgcaccttctgtatcttgtctgctctaggtaggtggcgagttcctgactttatcaaatggtcgcaacctcctagtggcagtaacgtgtctgctctaggtaggcggcgagttcctggcttggtcaaatggtcgctgcctcctagtggtagggagaaactaagtgtcactggatgtatttttcagtggcatcatgatgggagagctgtacgtacggtgattatgctttgctacagtcgggttgcagattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ASCH

Protein Analysis

495

Amino Acids

55.23

Weight (kDa)

9.86

Isoelectric Point (pI)

69.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000267)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g19660 FvH4_1g30321 FvH4_4g07610 FvH4_5g00140 FvH4_6g23340 FvH4_6g29890
rosa_chinensis RchiOBHm_Chr1g0319561 RchiOBHm_Chr1g0320181 RchiOBHm_Chr1g0330531 RchiOBHm_Chr1g0339901 RchiOBHm_Chr1g0341281 RchiOBHm_Chr1g0346381 RchiOBHm_Chr1g0351211 RchiOBHm_Chr1g0358041 RchiOBHm_Chr1g0367541 RchiOBHm_Chr2g0119361 RchiOBHm_Chr2g0120321 RchiOBHm_Chr2g0140171 RchiOBHm_Chr2g0150711 RchiOBHm_Chr2g0151251 RchiOBHm_Chr2g0160901 RchiOBHm_Chr3g0447381 RchiOBHm_Chr3g0459951 RchiOBHm_Chr3g0465101 RchiOBHm_Chr4g0392281 RchiOBHm_Chr4g0405571 RchiOBHm_Chr4g0412841 RchiOBHm_Chr4g0413331 RchiOBHm_Chr4g0422711 RchiOBHm_Chr4g0422751 RchiOBHm_Chr4g0423141 RchiOBHm_Chr4g0423271 RchiOBHm_Chr4g0424711 RchiOBHm_Chr4g0427731 RchiOBHm_Chr4g0442201 RchiOBHm_Chr5g0026201 RchiOBHm_Chr5g0050261 RchiOBHm_Chr6g0277431 RchiOBHm_Chr6g0279711 RchiOBHm_Chr6g0280101 RchiOBHm_Chr6g0280951 RchiOBHm_Chr6g0295101 RchiOBHm_Chr6g0312921 RchiOBHm_Chr7g0201181 RchiOBHm_Chr7g0204591 RchiOBHm_Chr7g0204721 RchiOBHm_Chr7g0204801 RchiOBHm_Chr7g0208411 RchiOBHm_Chr7g0213041 RchiOBHm_Chr7g0215471
rosa_laevigata RLG00000004867 RLG00000018361 RLG00000036656
rosa_multiflora Rmu_sc0000376.1_g000034 Rmu_sc0001576.1_g000002 Rmu_sc0001971.1_g000008 Rmu_sc0002105.1_g000002 Rmu_sc0002310.1_g000018 Rmu_sc0005120.1_g000007 Rmu_sc0005665.1_g000017 Rmu_sc0005715.1_g000010 Rmu_sc0009785.1_g000031 Rmu_sc0010202.1_g000013 Rmu_sc0040921.1_g000004
rosa_roxburghii Rroxscaffold_1G00003120 Rroxscaffold_1G00026660 Rroxscaffold_2G00098060 Rroxscaffold_2G00111130 Rroxscaffold_4G00279230 Rroxscaffold_4G00295650 Rroxscaffold_5G00361140 Rroxscaffold_5G00374320 Rroxscaffold_6G00406950
rosa_rugosa Rorug01G0102500 Rorug01G0165700 Rorug01G0165700 Rorug01G0195800 Rorug01G0195800 Rorug01G0217200 Rorug01G0335400 Rorug02G0029300 Rorug02G0036800 Rorug02G0073300 Rorug02G0279100 Rorug02G0326300 Rorug02G0338400 Rorug02G0371300.1 Rorug02G0421700 Rorug02G0458000 Rorug03G0105100 Rorug03G0105700 Rorug03G0220900 Rorug03G0272600 Rorug03G0322700 Rorug03G0336800 Rorug03G0356900 Rorug03G0364200.1 Rorug04G0028300 Rorug04G0032600 Rorug04G0034400 Rorug04G0203900 Rorug05G0192000 Rorug05G0192000 Rorug05G0313700 Rorug05G0391500 Rorug05G0403500.1 Rorug06G0032700 Rorug06G0174700 Rorug06G0409900 Rorug06G0458800 Rorug07G0114100 Rorug07G0137600 Rorug07G0163900 Rorug07G0244900 Rorug07G0274700 Rorug07G0310400
rosa_samantha Rh1AG070100 Rh1AG070300 Rh1AG070600 Rh1AG070900 Rh1BG181700 Rh3DG183400 Rh4CG044400 Rh4CG163300 Rh5BG000300 Rh6AG036500 Rh7AG328500 Rh7BG204000 Rh7CG345900
rosa_wichuraiana Rw2G022850 Rw6G002520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 700
Acc16I TGCGCA 1 cut(s) 805
Acc36I ACCTGC 1 cut(s) 700
AccB7I CCANNNNNTGG 1 cut(s) 993
AccII CGCG 3 cut(s) 625, 765, 1020
AclI AACGTT 1 cut(s) 444
AclWI GGATC 3 cut(s) 401, 909, 941
AcoI YGGCCR 3 cut(s) 113, 811, 984
AcsI RAATTY 1 cut(s) 383
AcuI CTGAAG 1 cut(s) 486
AfaI GTAC 3 cut(s) 800, 1446, 1450
AflIII ACRYGT 1 cut(s) 1323
AgsI TTSAA 6 cut(s) 103, 276, 282, 365, 421, 872
AhdI GACNNNNNGTC 1 cut(s) 1191
AjiI CACGTC 1 cut(s) 698
AjnI CCWGG 3 cut(s) 357, 986, 1351
AjuI GAANNNNNNNTTGG 2 cut(s) 116, 148
AluBI AGCT 7 cut(s) 85, 338, 424, 503, 518, 542, 1442
AluI AGCT 7 cut(s) 85, 338, 424, 503, 518, 542, 1442
Alw21I GWGCWC 4 cut(s) 87, 149, 511, 672
Alw26I GTCTC 5 cut(s) 82, 131, 688, 731, 1199
Alw44I GTGCAC 2 cut(s) 507, 668
AlwI GGATC 3 cut(s) 401, 909, 941
Ama87I CYCGRG 2 cut(s) 37, 127
AoxI GGCC 9 cut(s) 113, 551, 555, 651, 700, 811, 984, 1095, 1223
ApaLI GTGCAC 2 cut(s) 507, 668
ApeKI GCWGC 8 cut(s) 338, 515, 518, 817, 862, 1042, 1051, 1372
ApoI RAATTY 1 cut(s) 383
Asp700I GAANNNNTTC 1 cut(s) 478
AspLEI GCGC 5 cut(s) 625, 782, 806, 1020, 1063
AspS9I GGNCC 7 cut(s) 4, 651, 701, 919, 1069, 1095, 1223
AsuC2I CCSGG 3 cut(s) 13, 951, 1099
AsuHPI GGTGA 4 cut(s) 21, 668, 1100, 1465
AvaI CYCGRG 2 cut(s) 37, 127
AvaII GGWCC 3 cut(s) 4, 919, 1069
BaeGI GKGCMC 2 cut(s) 511, 672
BalI TGGCCA 1 cut(s) 986
BanII GRGCYC 1 cut(s) 87
BbsI GAAGAC 1 cut(s) 208
Bbv12I GWGCWC 4 cut(s) 87, 149, 511, 672
BbvI GCAGC 8 cut(s) 325, 505, 527, 829, 874, 1038, 1054, 1359
BccI CCATC 5 cut(s) 653, 710, 852, 1041, 1427
BceAI ACGGC 1 cut(s) 809
BcgI CGANNNNNNTGC 2 cut(s) 166, 200
BciT130I CCWGG 3 cut(s) 359, 988, 1353
BclI TGATCA 1 cut(s) 448
BcnI CCSGG 3 cut(s) 13, 951, 1099
BcoDI GTCTC 5 cut(s) 82, 131, 688, 731, 1199
BfmI CTRYAG 1 cut(s) 1468
BfoI RGCGCY 1 cut(s) 1064
BfuAI ACCTGC 1 cut(s) 700
BglI GCCNNNNNGGC 1 cut(s) 112
BglII AGATCT 2 cut(s) 476, 848
Bme1390I CCNGG 6 cut(s) 13, 359, 951, 988, 1099, 1353
Bme18I GGWCC 3 cut(s) 4, 919, 1069
BmeRI GACNNNNNGTC 1 cut(s) 1191
BmeT110I CYCGRG 2 cut(s) 37, 127
BmgBI CACGTC 1 cut(s) 698
BmgT120I GGNCC 7 cut(s) 4, 651, 701, 919, 1069, 1095, 1223
BmiI GGNNCC 2 cut(s) 231, 920
BmrFI CCNGG 6 cut(s) 13, 359, 951, 988, 1099, 1353
BmrI ACTGGG 1 cut(s) 1086
BmsI GCATC 3 cut(s) 597, 952, 1435
BmuI ACTGGG 1 cut(s) 1086
BpiI GAAGAC 1 cut(s) 208
BplI GAGNNNNNCTC 2 cut(s) 594, 626
BpmI CTGGAG 3 cut(s) 77, 517, 658
Bpu10I CCTNAGC 1 cut(s) 1111
BpuEI CTTGAG 1 cut(s) 219
BpuMI CCSGG 3 cut(s) 13, 951, 1099
BsaAI YACGTR 1 cut(s) 1448
BsaBI GATNNNNATC 2 cut(s) 308, 751
BsaI GGTCTC 1 cut(s) 82
BsaJI CCNNGG 6 cut(s) 225, 357, 629, 704, 913, 950
BsaWI WCCGGW 1 cut(s) 843
BsaXI ACNNNNNCTCC 4 cut(s) 627, 657, 1017, 1047
Bse118I RCCGGY 5 cut(s) 111, 553, 653, 813, 1232
Bse1I ACTGG 2 cut(s) 1081, 1411
Bse8I GATNNNNATC 2 cut(s) 308, 751
BseBI CCWGG 3 cut(s) 359, 988, 1353
BseDI CCNNGG 6 cut(s) 225, 357, 629, 704, 913, 950
BseGI GGATG 3 cut(s) 23, 721, 1415
BseJI GATNNNNATC 2 cut(s) 308, 751
BseMII CTCAG 4 cut(s) 86, 249, 683, 890
BseNI ACTGG 2 cut(s) 1081, 1411
BseRI GAGGAG 4 cut(s) 211, 214, 222, 233
BseSI GKGCMC 2 cut(s) 511, 672
BseXI GCAGC 8 cut(s) 325, 505, 527, 829, 874, 1038, 1054, 1359
BseYI CCCAGC 1 cut(s) 424
Bsh1236I CGCG 3 cut(s) 625, 765, 1020
BshFI GGCC 9 cut(s) 115, 553, 557, 653, 702, 813, 986, 1097, 1225
BsiHKAI GWGCWC 4 cut(s) 87, 149, 511, 672
BsiHKCI CYCGRG 2 cut(s) 37, 127
BsiWI CGTACG 1 cut(s) 1448
BslFI GGGAC 1 cut(s) 1114
BsmAI GTCTC 5 cut(s) 82, 131, 688, 731, 1199
BsmBI CGTCTC 1 cut(s) 688
BsmFI GGGAC 1 cut(s) 1114
BsnI GGCC 9 cut(s) 115, 553, 557, 653, 702, 813, 986, 1097, 1225
Bso31I GGTCTC 1 cut(s) 82
BsoBI CYCGRG 2 cut(s) 37, 127
Bsp1286I GDGCHC 4 cut(s) 87, 149, 511, 672
Bsp143I GATC 9 cut(s) 309, 406, 448, 476, 746, 752, 848, 901, 946
BspANI GGCC 9 cut(s) 115, 553, 557, 653, 702, 813, 986, 1097, 1225
BspCNI CTCAG 4 cut(s) 85, 250, 684, 889
BspFNI CGCG 3 cut(s) 625, 765, 1020
BspHI TCATGA 1 cut(s) 1429
BspLI GGNNCC 2 cut(s) 231, 920
BspMI ACCTGC 1 cut(s) 700
BspPI GGATC 3 cut(s) 401, 909, 941
BspTNI GGTCTC 1 cut(s) 82
BsrFI RCCGGY 5 cut(s) 111, 553, 653, 813, 1232
BsrI ACTGG 2 cut(s) 1081, 1411
BssAI RCCGGY 5 cut(s) 111, 553, 653, 813, 1232
BssECI CCNNGG 6 cut(s) 225, 357, 629, 704, 913, 950
BssMI GATC 9 cut(s) 309, 406, 448, 476, 746, 752, 848, 901, 946
BssT1I CCWWGG 3 cut(s) 629, 704, 913
Bst2UI CCWGG 3 cut(s) 359, 988, 1353
Bst4CI ACNGT 4 cut(s) 528, 1152, 1453, 1472
Bst6I CTCTTC 4 cut(s) 215, 251, 259, 462
BstBAI YACGTR 1 cut(s) 1448
BstC8I GCNNGC 2 cut(s) 555, 815
BstDEI CTNAG 6 cut(s) 72, 258, 692, 876, 1111, 1397
BstF5I GGATG 3 cut(s) 23, 721, 1415
BstFNI CGCG 3 cut(s) 625, 765, 1020
BstH2I RGCGCY 1 cut(s) 1064
BstHHI GCGC 5 cut(s) 625, 782, 806, 1020, 1063
BstKTI GATC 9 cut(s) 312, 409, 451, 479, 749, 755, 851, 904, 949
BstMAI GTCTC 5 cut(s) 82, 131, 688, 731, 1199
BstMBI GATC 9 cut(s) 309, 406, 448, 476, 746, 752, 848, 901, 946
BstNI CCWGG 3 cut(s) 359, 988, 1353
BstNSI RCATGY 1 cut(s) 786
BstSCI CCNGG 6 cut(s) 11, 357, 949, 986, 1097, 1351
BstSFI CTRYAG 1 cut(s) 1468
BstSLI GKGCMC 2 cut(s) 511, 672
BstSNI TACGTA 1 cut(s) 1448
BstUI CGCG 3 cut(s) 625, 765, 1020
BstV1I GCAGC 8 cut(s) 325, 505, 527, 829, 874, 1038, 1054, 1359
BstV2I GAAGAC 1 cut(s) 208
BstX2I RGATCY 4 cut(s) 406, 476, 848, 901
BstYI RGATCY 4 cut(s) 406, 476, 848, 901
BsuRI GGCC 9 cut(s) 115, 553, 557, 653, 702, 813, 986, 1097, 1225
BtgZI GCGATG 2 cut(s) 871, 1060
BtrI CACGTC 1 cut(s) 698
BtsCI GGATG 3 cut(s) 23, 721, 1415
BtsIMutI CAGTG 2 cut(s) 1404, 1427
BveI ACCTGC 1 cut(s) 700
Cac8I GCNNGC 2 cut(s) 555, 815
CciI TCATGA 1 cut(s) 1429
CfoI GCGC 5 cut(s) 625, 782, 806, 1020, 1063
Cfr10I RCCGGY 5 cut(s) 111, 553, 653, 813, 1232
Cfr13I GGNCC 7 cut(s) 4, 651, 701, 919, 1069, 1095, 1223
CseI GACGC 1 cut(s) 614
Csp6I GTAC 3 cut(s) 799, 1445, 1449
CspCI CAANNNNNGTGG 2 cut(s) 693, 728
CviAII CATG 3 cut(s) 783, 1202, 1430
CviQI GTAC 3 cut(s) 799, 1445, 1449
DdeI CTNAG 6 cut(s) 72, 258, 692, 876, 1111, 1397
DpnI GATC 9 cut(s) 311, 408, 450, 478, 748, 754, 850, 903, 948
DpnII GATC 9 cut(s) 309, 406, 448, 476, 746, 752, 848, 901, 946
DriI GACNNNNNGTC 1 cut(s) 1191
EaeI YGGCCR 3 cut(s) 113, 811, 984
Eam1104I CTCTTC 4 cut(s) 215, 251, 259, 462
Eam1105I GACNNNNNGTC 1 cut(s) 1191
EarI CTCTTC 4 cut(s) 215, 251, 259, 462
EciI GGCGGA 1 cut(s) 899
Ecl136II GAGCTC 1 cut(s) 85
Eco105I TACGTA 1 cut(s) 1448
Eco130I CCWWGG 3 cut(s) 629, 704, 913
Eco24I GRGCYC 1 cut(s) 87
Eco31I GGTCTC 1 cut(s) 82
Eco47I GGWCC 3 cut(s) 4, 919, 1069
Eco53kI GAGCTC 1 cut(s) 85
Eco57I CTGAAG 1 cut(s) 486
Eco88I CYCGRG 2 cut(s) 37, 127
EcoICRI GAGCTC 1 cut(s) 85
EcoO109I RGGNCCY 2 cut(s) 919, 1069
EcoRII CCWGG 3 cut(s) 357, 986, 1351
EcoT14I CCWWGG 3 cut(s) 629, 704, 913
EcoT38I GRGCYC 1 cut(s) 87
ErhI CCWWGG 3 cut(s) 629, 704, 913
Esp3I CGTCTC 1 cut(s) 688
FaeI CATG 3 cut(s) 786, 1205, 1433
FalI AAGNNNNNCTT 2 cut(s) 1210, 1242
FaqI GGGAC 1 cut(s) 1114
FatI CATG 3 cut(s) 782, 1201, 1429
FauI CCCGC 2 cut(s) 384, 758
FbaI TGATCA 1 cut(s) 448
FokI GGATG 3 cut(s) 10, 728, 1422
FriOI GRGCYC 1 cut(s) 87
FseI GGCCGGCC 1 cut(s) 557
FspI TGCGCA 1 cut(s) 805
GlaI GCGC 5 cut(s) 624, 781, 805, 1019, 1062
GsaI CCCAGC 1 cut(s) 428
GsuI CTGGAG 3 cut(s) 77, 517, 658
HaeII RGCGCY 1 cut(s) 1064
HaeIII GGCC 9 cut(s) 115, 553, 557, 653, 702, 813, 986, 1097, 1225
HgaI GACGC 1 cut(s) 614
HhaI GCGC 5 cut(s) 625, 782, 806, 1020, 1063
Hin1II CATG 3 cut(s) 786, 1205, 1433
Hin6I GCGC 5 cut(s) 623, 780, 804, 1018, 1061
HinP1I GCGC 5 cut(s) 623, 780, 804, 1018, 1061
HincII GTYRAC 1 cut(s) 1185
HindII GTYRAC 1 cut(s) 1185
HinfI GANTC 4 cut(s) 40, 155, 636, 885
HphI GGTGA 4 cut(s) 21, 668, 1100, 1465
Hpy166II GTNNAC 3 cut(s) 509, 670, 1185
Hpy188I TCNGA 7 cut(s) 45, 82, 154, 160, 259, 466, 647
Hpy188III TCNNGA 9 cut(s) 313, 456, 534, 750, 878, 893, 957, 1283, 1430
Hpy8I GTNNAC 3 cut(s) 509, 670, 1185
Hpy99I CGWCG 2 cut(s) 644, 647
HpyAV CCTTC 4 cut(s) 53, 583, 770, 1255
HpyCH4III ACNGT 4 cut(s) 528, 1152, 1453, 1472
HpyCH4IV ACGT 4 cut(s) 444, 697, 1323, 1447
HpyCH4V TGCA 6 cut(s) 187, 440, 509, 670, 1242, 1481
HpyF3I CTNAG 6 cut(s) 72, 258, 692, 876, 1111, 1397
HpySE526I ACGT 4 cut(s) 444, 697, 1323, 1447
Hsp92II CATG 3 cut(s) 786, 1205, 1433
HspAI GCGC 5 cut(s) 623, 780, 804, 1018, 1061
KroI GCCGGC 2 cut(s) 553, 813
KroNI GCCGGC 2 cut(s) 555, 815
Ksp22I TGATCA 1 cut(s) 448
Kzo9I GATC 9 cut(s) 309, 406, 448, 476, 746, 752, 848, 901, 946
LmnI GCTCC 3 cut(s) 144, 235, 615
Lsp1109I GCAGC 8 cut(s) 325, 505, 527, 829, 874, 1038, 1054, 1359
LweI GCATC 3 cut(s) 597, 952, 1435
MaeII ACGT 4 cut(s) 444, 697, 1323, 1447
MaeIII GTNAC 3 cut(s) 1146, 1319, 1402
MalI GATC 9 cut(s) 311, 408, 450, 478, 748, 754, 850, 903, 948
MboI GATC 9 cut(s) 309, 406, 448, 476, 746, 752, 848, 901, 946
MboII GAAGA 9 cut(s) 202, 208, 238, 241, 246, 471, 479, 486, 561
MflI RGATCY 4 cut(s) 406, 476, 848, 901
MhlI GDGCHC 4 cut(s) 87, 149, 511, 672
MlsI TGGCCA 1 cut(s) 986
MluCI AATT 3 cut(s) 276, 321, 383
MluNI TGGCCA 1 cut(s) 986
MlyI GAGTC 4 cut(s) 49, 164, 645, 894
MmeI TCCRAC 3 cut(s) 114, 625, 716
Mox20I TGGCCA 1 cut(s) 986
MroNI GCCGGC 2 cut(s) 553, 813
MroXI GAANNNNTTC 1 cut(s) 478
MscI TGGCCA 1 cut(s) 986
MseI TTAA 5 cut(s) 320, 324, 381, 584, 1486
MslI CAYNNNNRTG 1 cut(s) 1431
Msp20I TGGCCA 1 cut(s) 986
MspA1I CMGCKG 3 cut(s) 518, 865, 928
MspR9I CCNGG 6 cut(s) 13, 359, 951, 988, 1099, 1353
MvaI CCWGG 3 cut(s) 359, 988, 1353
MvnI CGCG 3 cut(s) 625, 765, 1020
NaeI GCCGGC 2 cut(s) 555, 815
NciI CCSGG 3 cut(s) 13, 951, 1099
NdeII GATC 9 cut(s) 309, 406, 448, 476, 746, 752, 848, 901, 946
NgoMIV GCCGGC 2 cut(s) 553, 813
NlaIII CATG 3 cut(s) 786, 1205, 1433
NlaIV GGNNCC 2 cut(s) 231, 920
NmeAIII GCCGAG 1 cut(s) 206
NmuCI GTSAC 1 cut(s) 1402
NsbI TGCGCA 1 cut(s) 805
NspI RCATGY 1 cut(s) 786
PacI TTAATTAA 1 cut(s) 324
PaeR7I CTCGAG 1 cut(s) 37
PagI TCATGA 1 cut(s) 1429
PaqCI CACCTGC 1 cut(s) 700
PdiI GCCGGC 2 cut(s) 555, 815
PdmI GAANNNNTTC 1 cut(s) 478
Pfl23II CGTACG 1 cut(s) 1448
PflFI GACNNNGTC 1 cut(s) 884
PflMI CCANNNNNTGG 1 cut(s) 993
PfoI TCCNGGA 1 cut(s) 11
PleI GAGTC 4 cut(s) 48, 163, 644, 893
PpsI GAGTC 4 cut(s) 48, 163, 644, 893
Ppu21I YACGTR 1 cut(s) 1448
PpuMI RGGWCCY 2 cut(s) 919, 1069
Psp124BI GAGCTC 1 cut(s) 87
Psp1406I AACGTT 1 cut(s) 444
Psp5II RGGWCCY 2 cut(s) 919, 1069
Psp6I CCWGG 3 cut(s) 357, 986, 1351
PspFI CCCAGC 1 cut(s) 424
PspGI CCWGG 3 cut(s) 357, 986, 1351
PspLI CGTACG 1 cut(s) 1448
PspN4I GGNNCC 2 cut(s) 231, 920
PspPI GGNCC 7 cut(s) 4, 651, 701, 919, 1069, 1095, 1223
PspPPI RGGWCCY 2 cut(s) 919, 1069
PspXI VCTCGAGB 1 cut(s) 37
PsuI RGATCY 4 cut(s) 406, 476, 848, 901
PsyI GACNNNGTC 1 cut(s) 884
PvuII CAGCTG 1 cut(s) 518
RigI GGCCGGCC 1 cut(s) 557
RsaI GTAC 3 cut(s) 800, 1446, 1450
RsaNI GTAC 3 cut(s) 799, 1445, 1449
RseI CAYNNNNRTG 1 cut(s) 1431
SacI GAGCTC 1 cut(s) 87
SaqAI TTAA 5 cut(s) 320, 324, 381, 584, 1486
Sau3AI GATC 9 cut(s) 309, 406, 448, 476, 746, 752, 848, 901, 946
Sau96I GGNCC 7 cut(s) 4, 651, 701, 919, 1069, 1095, 1223
SchI GAGTC 4 cut(s) 49, 164, 645, 894
ScrFI CCNGG 6 cut(s) 13, 359, 951, 988, 1099, 1353
SduI GDGCHC 4 cut(s) 87, 149, 511, 672
SfaNI GCATC 3 cut(s) 597, 952, 1435
SfcI CTRYAG 1 cut(s) 1468
Sfr274I CTCGAG 1 cut(s) 37
SinI GGWCC 3 cut(s) 4, 919, 1069
SlaI CTCGAG 1 cut(s) 37
SmiMI CAYNNNNRTG 1 cut(s) 1431
SmlI CTYRAG 2 cut(s) 37, 234
SmoI CTYRAG 2 cut(s) 37, 234
SnaBI TACGTA 1 cut(s) 1448
Sse9I AATT 3 cut(s) 276, 321, 383
SstI GAGCTC 1 cut(s) 87
StyD4I CCNGG 6 cut(s) 11, 357, 949, 986, 1097, 1351
StyI CCWWGG 3 cut(s) 629, 704, 913
TaaI ACNGT 4 cut(s) 528, 1152, 1453, 1472
TaiI ACGT 4 cut(s) 447, 700, 1326, 1450
TaqI TCGA 4 cut(s) 38, 482, 751, 945
TasI AATT 3 cut(s) 276, 321, 383
TauI GCSGC 6 cut(s) 623, 868, 928, 1015, 1018, 1345
Tru1I TTAA 5 cut(s) 320, 324, 381, 584, 1486
Tru9I TTAA 5 cut(s) 320, 324, 381, 584, 1486
TscAI CASTG 2 cut(s) 1411, 1427
TseFI GTSAC 1 cut(s) 1402
TseI GCWGC 8 cut(s) 338, 515, 518, 817, 862, 1042, 1051, 1372
Tsp45I GTSAC 1 cut(s) 1402
TspDTI ATGAA 2 cut(s) 348, 507
TspGWI ACGGA 2 cut(s) 181, 602
TspRI CASTG 2 cut(s) 1411, 1427
Tth111I GACNNNGTC 1 cut(s) 884
Van91I CCANNNNNTGG 1 cut(s) 993
VneI GTGCAC 2 cut(s) 507, 668
VpaK11BI GGWCC 3 cut(s) 4, 919, 1069
XapI RAATTY 1 cut(s) 383
XbaI TCTAGA 2 cut(s) 455, 956
XceI RCATGY 1 cut(s) 786
XhoI CTCGAG 1 cut(s) 37
XmnI GAANNNNTTC 1 cut(s) 478
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.